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Search of human proteins with 239744837
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239744837 PREDICTED: hypothetical protein XP_002343283 [Homo
sapiens]
(196 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239744837 PREDICTED: hypothetical protein XP_002343283 [Homo ... 411 e-115
gi|239756018 PREDICTED: similar to hCG1790963 [Homo sapiens] 406 e-114
gi|239750538 PREDICTED: hypothetical protein XP_002347438 [Homo ... 406 e-114
gi|163644316 hypothetical protein LOC23255 [Homo sapiens] 130 5e-31
gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens] 39 0.002
gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens] 38 0.005
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 37 0.011
gi|238624188 diffuse panbronchiolitis critical region 1 protein ... 36 0.024
gi|54607077 ankyrin repeat domain 57 [Homo sapiens] 35 0.041
gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens] 35 0.053
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 34 0.070
gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo sa... 34 0.091
gi|14249168 proline/serine-rich coiled-coil 1 isoform a [Homo sa... 34 0.091
gi|5174519 SMAD family member 9 isoform b [Homo sapiens] 33 0.12
gi|42734395 zinc finger protein 710 [Homo sapiens] 33 0.12
gi|52630338 proline/serine-rich coiled-coil 1 isoform b [Homo sa... 33 0.16
gi|59806363 hypothetical protein LOC9729 [Homo sapiens] 33 0.16
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 33 0.16
gi|187828357 SMAD family member 9 isoform a [Homo sapiens] 33 0.20
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 33 0.20
gi|150170670 piccolo isoform 2 [Homo sapiens] 33 0.20
gi|150378539 piccolo isoform 1 [Homo sapiens] 33 0.20
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 33 0.20
gi|7706589 GNAS complex locus NESP55 [Homo sapiens] 32 0.26
gi|41281911 Ymer protein long isoform [Homo sapiens] 32 0.26
gi|20070163 voltage-dependent calcium channel alpha 1G subunit i... 32 0.35
gi|236459851 ubinuclein 2 [Homo sapiens] 32 0.35
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 32 0.35
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 32 0.35
gi|239746922 PREDICTED: similar to cancer/testis antigen family ... 32 0.35
>gi|239744837 PREDICTED: hypothetical protein XP_002343283 [Homo
sapiens]
Length = 196
Score = 411 bits (1056), Expect = e-115
Identities = 196/196 (100%), Positives = 196/196 (100%)
Query: 1 MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEYAVKEERRQAAHGPPGPHSDSH 60
MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEYAVKEERRQAAHGPPGPHSDSH
Sbjct: 1 MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEYAVKEERRQAAHGPPGPHSDSH 60
Query: 61 SLRDTAEPGAMEELPCSALVRSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP 120
SLRDTAEPGAMEELPCSALVRSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP
Sbjct: 61 SLRDTAEPGAMEELPCSALVRSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP 120
Query: 121 LEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKK 180
LEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKK
Sbjct: 121 LEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKK 180
Query: 181 HTAAECSTCETEMFLK 196
HTAAECSTCETEMFLK
Sbjct: 181 HTAAECSTCETEMFLK 196
>gi|239756018 PREDICTED: similar to hCG1790963 [Homo sapiens]
Length = 196
Score = 406 bits (1044), Expect = e-114
Identities = 194/196 (98%), Positives = 195/196 (99%)
Query: 1 MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEYAVKEERRQAAHGPPGPHSDSH 60
MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLE+AVKEERRQAAHGPPGPHSDSH
Sbjct: 1 MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSH 60
Query: 61 SLRDTAEPGAMEELPCSALVRSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP 120
SLRDTAEPGAMEELPCSALV SLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP
Sbjct: 61 SLRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP 120
Query: 121 LEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKK 180
LEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKK
Sbjct: 121 LEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKK 180
Query: 181 HTAAECSTCETEMFLK 196
HTAAECSTCETEMFLK
Sbjct: 181 HTAAECSTCETEMFLK 196
>gi|239750538 PREDICTED: hypothetical protein XP_002347438 [Homo
sapiens]
Length = 196
Score = 406 bits (1044), Expect = e-114
Identities = 194/196 (98%), Positives = 195/196 (99%)
Query: 1 MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEYAVKEERRQAAHGPPGPHSDSH 60
MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLE+AVKEERRQAAHGPPGPHSDSH
Sbjct: 1 MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEHAVKEERRQAAHGPPGPHSDSH 60
Query: 61 SLRDTAEPGAMEELPCSALVRSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP 120
SLRDTAEPGAMEELPCSALV SLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP
Sbjct: 61 SLRDTAEPGAMEELPCSALVPSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP 120
Query: 121 LEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKK 180
LEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKK
Sbjct: 121 LEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKVKECFFKK 180
Query: 181 HTAAECSTCETEMFLK 196
HTAAECSTCETEMFLK
Sbjct: 181 HTAAECSTCETEMFLK 196
>gi|163644316 hypothetical protein LOC23255 [Homo sapiens]
Length = 1586
Score = 130 bits (328), Expect = 5e-31
Identities = 62/72 (86%), Positives = 66/72 (91%)
Query: 1 MCREEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEYAVKEERRQAAHGPPGPHSDSH 60
MCREEGGEGTP +QDL AP GYTLTENVARILN+KLLE+A+KEERRQAAHGPPG HSDSH
Sbjct: 1503 MCREEGGEGTPVKQDLSAPPGYTLTENVARILNKKLLEHALKEERRQAAHGPPGLHSDSH 1562
Query: 61 SLRDTAEPGAME 72
SL DTAEPG ME
Sbjct: 1563 SLGDTAEPGPME 1574
>gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens]
Length = 1729
Score = 39.3 bits (90), Expect = 0.002
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 52 PPGPHSDSHS-LRDTAEPGAMEELPCSALVRSLETCFSSSERPANSRPPSRWAPYSPAAS 110
PP S HS L + P A + PC A+ S + E ++ P A +P A
Sbjct: 306 PPDKSSPCHSQLLEAQTPEASQASPCPAVTPSAPSAALPDEGSRHTPSPGLPAEGAPEAP 365
Query: 111 QPQSPGDPTPLEQHSGEEPSEEKP 134
+P SP P LE HS ++P P
Sbjct: 366 RPSSP-PPEVLEPHSLDQPPATSP 388
>gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens]
Length = 496
Score = 38.1 bits (87), Expect = 0.005
Identities = 30/77 (38%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 45 RRQAAHGPPGPHSD-----SHSLRDTAEPGAMEELPCSALVRSLETCFSSSERPANSRPP 99
RR+ A GPP P S+ SL D AEPG LP S TC SER A P
Sbjct: 82 RRRRAGGPPRPMSEPGAGAGSSLLDVAEPGGPGWLPESDC--ETVTCCLFSERDAAGAPR 139
Query: 100 SRWAPYSPAASQPQSPG 116
P + AA +P G
Sbjct: 140 DASDPLAGAALEPAGGG 156
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 37.0 bits (84), Expect = 0.011
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 98 PPSRWAPYSPAASQP-QSPGDPTPLEQHSGEEPSEEKPHHDASLHGLSQ 145
P ++ P+ P S P S G P+P E+ EE EE+ + GLSQ
Sbjct: 244 PEQKYDPFEPTGSNPSSSAGTPSPEEEEEEEEEEEEEEEDEEEEEGLSQ 292
>gi|238624188 diffuse panbronchiolitis critical region 1 protein [Homo
sapiens]
Length = 1393
Score = 35.8 bits (81), Expect = 0.024
Identities = 39/165 (23%), Positives = 61/165 (36%), Gaps = 14/165 (8%)
Query: 5 EGGEGTPARQDLPAPRGYTLTENVARILNRKLLEYAVKEERRQAAHGPPGPHSD-SHSLR 63
E GE TP ++ P TE+ RI N K A + HG + D + S
Sbjct: 923 EHGERTPLANEITTPSRAEPTEHGERIANEK----ATPSPAKPTEHGETTVNEDTTPSSA 978
Query: 64 DTAEPGAMEELPCSALVRSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTPLEQ 123
+ E G L S ER AN + +P+ ++P G+ TP
Sbjct: 979 EPTENGERTPLANENTTTSPTESTEHGERTANEKT-------TPSPAEPTEHGERTP-SA 1030
Query: 124 HSGEEPSEEKP-HHDASLHGLSQYNSLSFAQPHHRHERNSAQKER 167
+ PS KP H+ ++ + S +P E+ + E+
Sbjct: 1031 NEKTIPSPAKPTEHEEMTPSANENTTPSPVKPTEHGEKTTLANEK 1075
Score = 30.4 bits (67), Expect = 1.0
Identities = 35/166 (21%), Positives = 55/166 (33%), Gaps = 10/166 (6%)
Query: 5 EGGEGTPARQDLPAPRGYTLTENVARILNRKLLEYAVKEERRQAAHGPPGPHSDSHSLRD 64
E E T + P+P T N K HG P ++ ++
Sbjct: 481 ENRETTANEKTTPSPAEPTENGQRTPFANEK----TTSSSAEPTEHGERTPLANENTTPS 536
Query: 65 TAEPGAMEELPCSALVRSLETCFSSSERPANS-RPPSRWAPYSPAASQPQSPGDPTPLEQ 123
AEP E + +T S +E N R P +P+ ++P G TP
Sbjct: 537 PAEPTENRERTANE-----KTTPSPAEPTENGDRTPLANEKTTPSLAEPTENGQRTPFAN 591
Query: 124 HSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSS 169
S E H+ ++ + S A+P ER + + S
Sbjct: 592 EKTTSSSAEPTEHEERTPLANENTTPSPAEPTENRERTANENTTPS 637
Score = 30.4 bits (67), Expect = 1.0
Identities = 29/139 (20%), Positives = 50/139 (35%), Gaps = 6/139 (4%)
Query: 50 HGPPGPHSDSHSLRDTAEPGAMEELPCSALVRSLETCFSSSERPANSRPPSRWAPYSPAA 109
HG P ++ ++ AEP E + E P +R + +P+
Sbjct: 703 HGERTPLANENTTLSPAEPTENRERTAN------EKTTPFPAEPTENRERTANENTTPSP 756
Query: 110 SQPQSPGDPTPLEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSS 169
+QP GD TPL E + ++ + S A+P ER E ++
Sbjct: 757 AQPTENGDRTPLANEKTTPSLAEPTENGKRTPFANEKTTSSSAEPTEHAERTPLANENTT 816
Query: 170 FLKVKECFFKKHTAAECST 188
+ ++ TA E +T
Sbjct: 817 SSPAEPTENRERTANEKTT 835
Score = 30.0 bits (66), Expect = 1.3
Identities = 42/195 (21%), Positives = 66/195 (33%), Gaps = 13/195 (6%)
Query: 5 EGGEGTPARQDLPAPRGYTLTENVARILNRKLLEYAVK--EERRQAAHGPPGPHSDSHSL 62
E E T P+P G T EN N K V+ E R A+ P +
Sbjct: 443 ENRERTANENTTPSPAGPT--ENRETTANEKTTLSPVEPTENRETTANEKTTPSPAEPTE 500
Query: 63 RDTAEPGAMEELPCSALVRSL---------ETCFSSSERPANSRPPSRWAPYSPAASQPQ 113
P A E+ S+ + E S P +R + +P+ ++P
Sbjct: 501 NGQRTPFANEKTTSSSAEPTEHGERTPLANENTTPSPAEPTENRERTANEKTTPSPAEPT 560
Query: 114 SPGDPTPLEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSFLKV 173
GD TPL E + ++ + S A+P ER E ++
Sbjct: 561 ENGDRTPLANEKTTPSLAEPTENGQRTPFANEKTTSSSAEPTEHEERTPLANENTTPSPA 620
Query: 174 KECFFKKHTAAECST 188
+ ++ TA E +T
Sbjct: 621 EPTENRERTANENTT 635
Score = 30.0 bits (66), Expect = 1.3
Identities = 42/176 (23%), Positives = 61/176 (34%), Gaps = 19/176 (10%)
Query: 5 EGGEGTPARQDLPAPRGYTLTENVAR--ILNRKLLEYAVK----EERRQAAHG--PPGPH 56
E G+ TP + P TEN R N K + + EER A+ P P
Sbjct: 561 ENGDRTPLANEKTTPSLAEPTENGQRTPFANEKTTSSSAEPTEHEERTPLANENTTPSPA 620
Query: 57 SDSHSLRDTAEP-------GAMEELPCSALVRSLETCFSSSERPANSRPPSRWAPYSPAA 109
+ + TA G E +A ++ T F + R + SPA
Sbjct: 621 EPTENRERTANENTTPSPAGPTENREMTANEKT--TLFPAEPTENRERTANEKTTSSPA- 677
Query: 110 SQPQSPGDPTPLEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQK 165
+P G TP S E H ++ +LS A+P ER + +K
Sbjct: 678 -EPTENGQRTPFANEKTTSSSAEPTEHGERTPLANENTTLSPAEPTENRERTANEK 732
>gi|54607077 ankyrin repeat domain 57 [Homo sapiens]
Length = 525
Score = 35.0 bits (79), Expect = 0.041
Identities = 32/106 (30%), Positives = 42/106 (39%), Gaps = 18/106 (16%)
Query: 45 RRQAAHGPPGPHSDSHSLRDTAEPGA---------MEELPCSALVRSLETC---FSSSER 92
+++ GP P D ++ TAEP A + LP +A SL E
Sbjct: 80 KKRFCEGPSEPSGDPPRIQVTAEPEAPDGPAGPEARDRLPDAAAPESLPGQGRELGEGEP 139
Query: 93 PANSRPPSRWAPYSPAASQPQSPGDPTPLEQHSGEEPSE--EKPHH 136
PA P+ W P S A + S D PL + PSE E P H
Sbjct: 140 PA----PAHWPPLSAGARRKNSRRDVQPLPRTPAPGPSEDLELPPH 181
>gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]
Length = 904
Score = 34.7 bits (78), Expect = 0.053
Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%)
Query: 89 SSERPANSRPPSRWAPY---SPAASQPQSPGDPTPLEQHSGEEPSEEKPHHDASLHGLSQ 145
S E P+ + P + A +PA P SP P+ Q E P D +L G
Sbjct: 125 SEEEPSGKKAPVQAAKLPSPAPARKPPLSPAQTNPVVQRRNEGAGGPPPKTDQALAGSLV 184
Query: 146 YNSLSFAQPH----HRHERNSAQKERSSFLKVKECFFKKHTAAECSTCETEMFL 195
++ H RH + RS F + K+C H+ A +T E F+
Sbjct: 185 SSTCGVCGKHVHLVQRHLADGRLYHRSCF-RCKQCSCTLHSGAYKATGEPGTFV 237
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 34.3 bits (77), Expect = 0.070
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 89 SSERPANSRPPSRWAPYSPAASQPQSPGDPTPLEQHSGEEPSEEKPHHDASLHGLSQYNS 148
+S P + PP AP +PA + PQ PG P SG E + + D L +S ++
Sbjct: 1638 ASAAPGDPHPPGPPAPAAPAPAAPQ-PGPDPPPGTDSGIEEVDSRSSSDHPLETISSAST 1696
Query: 149 LS 150
LS
Sbjct: 1697 LS 1698
Score = 29.6 bits (65), Expect = 1.7
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 13/120 (10%)
Query: 12 ARQDLPAPRGYTLTENVARI---LNRKLLEYAVKEERRQAAHGPPGPHSDSHSLRDTAEP 68
AR+ P G T+ + R + L ++ V A+ G PGP S S ++P
Sbjct: 418 ARRRGPPGTGLTVPPALLRANSDTSMALPDWMVFSAPGAASSGAPGPTSGSQG---QSQP 474
Query: 69 GAMEELPCSALVRSLETCFSSSERPANSRPPSRWAPYSPAASQPQS--PGDPTPLEQHSG 126
A S +RS +SS R A +R PSR A QP+ TP E +G
Sbjct: 475 SAPTTKLSSGTLRS-----ASSPRGARARSPSRGRHPEDAKRQPRGRPSSSGTPREGPAG 529
>gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo
sapiens]
Length = 333
Score = 33.9 bits (76), Expect = 0.091
Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 27/143 (18%)
Query: 3 REEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEYAVKEERRQAAHGPPGPHSDSHSL 62
RE GEG R+ P+PR T + + R LL P P S + L
Sbjct: 96 RESAGEGLGPRRVKPSPRRETFVLKDSPV--RDLLPTV-----NSLTRSTPSPSSLTPRL 148
Query: 63 RDTAEPGAMEELPC------SALVRSLETC--FSSSERPAN-----SRPP--SRWAPYSP 107
R G++ L S + R TC F +S+ PA+ S PP R P
Sbjct: 149 RSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGR 208
Query: 108 AASQPQSPGDPTPLEQHSGEEPS 130
AA+ P PTP+ +PS
Sbjct: 209 AAASP-----PTPIRSVLAPQPS 226
>gi|14249168 proline/serine-rich coiled-coil 1 isoform a [Homo
sapiens]
Length = 333
Score = 33.9 bits (76), Expect = 0.091
Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 27/143 (18%)
Query: 3 REEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEYAVKEERRQAAHGPPGPHSDSHSL 62
RE GEG R+ P+PR T + + R LL P P S + L
Sbjct: 96 RESAGEGLGPRRVKPSPRRETFVLKDSPV--RDLLPTV-----NSLTRSTPSPSSLTPRL 148
Query: 63 RDTAEPGAMEELPC------SALVRSLETC--FSSSERPAN-----SRPP--SRWAPYSP 107
R G++ L S + R TC F +S+ PA+ S PP R P
Sbjct: 149 RSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGR 208
Query: 108 AASQPQSPGDPTPLEQHSGEEPS 130
AA+ P PTP+ +PS
Sbjct: 209 AAASP-----PTPIRSVLAPQPS 226
>gi|5174519 SMAD family member 9 isoform b [Homo sapiens]
Length = 430
Score = 33.5 bits (75), Expect = 0.12
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 13/86 (15%)
Query: 56 HSDSHSLRDTAEPGAMEELPCSALVRSLETCFSSSERPANSRPPSRWAPYSPAASQPQSP 115
HS+ + P + ++ PCSAL S FS S P + P+SP SP
Sbjct: 166 HSEPLMPHNATYPDSFQQPPCSALPPSPSHAFSQS-------PCTASYPHSPG-----SP 213
Query: 116 GDPTPLEQHSGEEP-SEEKPHHDASL 140
+P QHS P E+P H S+
Sbjct: 214 SEPESPYQHSDFRPVCYEEPQHWCSV 239
>gi|42734395 zinc finger protein 710 [Homo sapiens]
Length = 664
Score = 33.5 bits (75), Expect = 0.12
Identities = 44/160 (27%), Positives = 61/160 (38%), Gaps = 18/160 (11%)
Query: 25 TENVARILNRKLLEYAVKEERRQAAHGPPGPHSDSHSLRDTAEP--GAMEELPCSALVRS 82
T R++ + E +EE+ PG D+ AE G + L S+ V+
Sbjct: 99 TRPPVRLVPKVKFEKVEEEEQEVYEVSVPGDDKDAGPAEAPAEAASGGCDALVQSSAVKM 158
Query: 83 LE-TCFSSSER-----PANSRPPSRWAPYSPAASQPQSPGDPTPLEQHSGEE--PSE--- 131
++ + FS R P RP APY P P G P P G E P+E
Sbjct: 159 IDLSAFSRKPRTLRHLPRTPRPELNVAPYDPHFPAPARDGFPEPSMALPGPEALPTECGF 218
Query: 132 EKPHHDASLHGLSQYNSLSFAQPHH-RHERNSAQKERSSF 170
E PH L LS + S P + E+ +E S F
Sbjct: 219 EPPH----LAPLSDPEAPSMESPEPVKPEQGFVWQEASEF 254
>gi|52630338 proline/serine-rich coiled-coil 1 isoform b [Homo
sapiens]
Length = 310
Score = 33.1 bits (74), Expect = 0.16
Identities = 41/165 (24%), Positives = 62/165 (37%), Gaps = 22/165 (13%)
Query: 3 REEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEYAVKEERRQAAHGPPGPHSDSHSL 62
RE GEG R+ P+PR T + + R LL P P S + L
Sbjct: 96 RESAGEGLGPRRVKPSPRRETFVLKDSPV--RDLLPTV-----NSLTRSTPSPSSLTPRL 148
Query: 63 RDTAEPGAMEELPCSALVRSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTPLE 122
R G+ VR+L +S +RP+N + S PA+ P S +PL
Sbjct: 149 RSNDRKGS---------VRALRA--TSGKRPSNMKRESPTCNLFPASKSPAS----SPLT 193
Query: 123 QHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKER 167
+ + P A+ ++ L QP+ H+ A +R
Sbjct: 194 RSTPPVRGRAGPSGRAAASEETRAAKLRACQPNATHQPECATWQR 238
>gi|59806363 hypothetical protein LOC9729 [Homo sapiens]
Length = 694
Score = 33.1 bits (74), Expect = 0.16
Identities = 15/23 (65%), Positives = 16/23 (69%)
Query: 87 FSSSERPANSRPPSRWAPYSPAA 109
FS RPAN R PSRWA SP+A
Sbjct: 650 FSRPARPANRRLPSRWASRSPSA 672
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 33.1 bits (74), Expect = 0.16
Identities = 31/121 (25%), Positives = 45/121 (37%), Gaps = 5/121 (4%)
Query: 3 REEGGEGTPARQDLPAPRGYTLTENVARILNRKLLEYAVKEERRQAAHGPPGPHSDSHSL 62
+ G +PA + P T T V +L + + Y R G PGP + +
Sbjct: 1760 KTSGSPRSPAGPEKPRGTQKT-TPGVPAVLRGRTVIYVPSPAPRAQPKGTPGPRATPRKV 1818
Query: 63 RDT--AEPGAMEELPCSALVRS--LETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDP 118
A+P A ++P RS L +SE S+PP P + A P S
Sbjct: 1819 APPCLAQPAAPAKVPSPGQQRSRSLHRPAKTSELATLSQPPRSATPPARLAKTPSSSSSQ 1878
Query: 119 T 119
T
Sbjct: 1879 T 1879
>gi|187828357 SMAD family member 9 isoform a [Homo sapiens]
Length = 467
Score = 32.7 bits (73), Expect = 0.20
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
Query: 56 HSDSHSLRDTAEPGAMEELPCSALVRSLETCFSSSERPANSRPPSRWAPYSPAA-SQPQS 114
HS+ + P + ++ PCSAL S FS S P + P+SP + S+P+S
Sbjct: 166 HSEPLMPHNATYPDSFQQPPCSALPPSPSHAFSQS-------PCTASYPHSPGSPSEPES 218
Query: 115 P----GDPTPLEQHSGE 127
P D PL H+ E
Sbjct: 219 PYQHSVDTPPLPYHATE 235
>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 32.7 bits (73), Expect = 0.20
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 50 HGPPGPHSDSHSLRDTAEPGAMEELPCSALVRSLETCFSSSERPANSRPPSRWA-PYSPA 108
H P P + R + E LP +L ++ R + + P RW P+SPA
Sbjct: 116 HAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEGEPRPYALPPRESPAPRPFRWGDPFSPA 175
Query: 109 ASQPQSPGDP 118
+PQ P P
Sbjct: 176 PPRPQPPSRP 185
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 32.7 bits (73), Expect = 0.20
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 91 ERPANSRPPSRWAPYS---------PAASQPQSPGDPTPLEQHSG------EEPSEEKPH 135
++P +++PPS+ P S PA PQ PG P Q G ++PS KP
Sbjct: 492 QQPGSAKPPSQ-QPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPS 550
Query: 136 HDASLHGLSQYNSLSFAQP 154
S +SQ S QP
Sbjct: 551 AQQSTKPVSQTGSGKPLQP 569
Score = 30.8 bits (68), Expect = 0.77
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 46 RQAAHGPPGPHSDSHSLRDTAEPG-AMEELPCSALVRSLETCFSSSERPANSRPPSRWAP 104
+Q G P H + ++PG A S L + L +++P +PP +
Sbjct: 307 QQPTPGKPPAQQPGH---EKSQPGPAKPPAQPSGLTKPL------AQQPGTVKPPVQPPG 357
Query: 105 YSPAASQPQSPGDPTPLEQHSGEEPSEEKP 134
+ +QP P P P +Q E+PS E+P
Sbjct: 358 TTKPPAQPLGPAKP-PAQQTGSEKPSSEQP 386
Score = 27.7 bits (60), Expect = 6.5
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 88 SSSERPANSRPPSRWAPYSPAASQPQSPG--DPTPLEQHSGEEPSEE 132
+S+++ ++PPS+ PA PQ PG P P + S + PS++
Sbjct: 459 TSAQQTGPTKPPSQLP--GPAKPPPQQPGPAKPPPQQPGSAKPPSQQ 503
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 32.7 bits (73), Expect = 0.20
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 91 ERPANSRPPSRWAPYS---------PAASQPQSPGDPTPLEQHSG------EEPSEEKPH 135
++P +++PPS+ P S PA PQ PG P Q G ++PS KP
Sbjct: 492 QQPGSAKPPSQ-QPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPS 550
Query: 136 HDASLHGLSQYNSLSFAQP 154
S +SQ S QP
Sbjct: 551 AQQSTKPVSQTGSGKPLQP 569
Score = 30.8 bits (68), Expect = 0.77
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 46 RQAAHGPPGPHSDSHSLRDTAEPG-AMEELPCSALVRSLETCFSSSERPANSRPPSRWAP 104
+Q G P H + ++PG A S L + L +++P +PP +
Sbjct: 307 QQPTPGKPPAQQPGH---EKSQPGPAKPPAQPSGLTKPL------AQQPGTVKPPVQPPG 357
Query: 105 YSPAASQPQSPGDPTPLEQHSGEEPSEEKP 134
+ +QP P P P +Q E+PS E+P
Sbjct: 358 TTKPPAQPLGPAKP-PAQQTGSEKPSSEQP 386
Score = 27.7 bits (60), Expect = 6.5
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 88 SSSERPANSRPPSRWAPYSPAASQPQSPG--DPTPLEQHSGEEPSEE 132
+S+++ ++PPS+ PA PQ PG P P + S + PS++
Sbjct: 459 TSAQQTGPTKPPSQLP--GPAKPPPQQPGPAKPPPQQPGSAKPPSQQ 503
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 32.7 bits (73), Expect = 0.20
Identities = 38/143 (26%), Positives = 56/143 (39%), Gaps = 22/143 (15%)
Query: 40 AVKEERRQAAHGPPGP-----HSDSHSLRDTAEPGAMEELPCSALVRSLETCFSSSERPA 94
A KE R+ P P S S S ++ + S+ S + SSS +
Sbjct: 2585 APKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2644
Query: 95 NSRPPSRWAPYSPAASQPQSPGDPTPLEQHSGEEPSEEKPHHDASLHGLSQYNSLSFA-- 152
+S PS P A +P SP P P E+ S S KP + L SLS++
Sbjct: 2645 SSSSPSPAKPGPQALPKPASPKKPPPGERRS---RSPRKP-----IDSLRDSRSLSYSPV 2696
Query: 153 -------QPHHRHERNSAQKERS 168
QP R +++S+ + S
Sbjct: 2697 ERRRPSPQPSPRDQQSSSSERGS 2719
Score = 31.6 bits (70), Expect = 0.45
Identities = 32/118 (27%), Positives = 45/118 (38%), Gaps = 29/118 (24%)
Query: 52 PPGPHSDSHSLRDTAEPGAMEELPCSALVRSLETCFSSSERPANSRPPSRWAPYSPAASQ 111
P P S++ RD + P + E+LP S SSSE S PPS
Sbjct: 390 PVNPPSEASPTRDRSPPKSPEKLPQS----------SSSE----SSPPS----------- 424
Query: 112 PQSPGDPTPLEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSS 169
PQ PT + +H+ P KP H + S + H R +R+ + S
Sbjct: 425 PQ----PTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPS 478
>gi|7706589 GNAS complex locus NESP55 [Homo sapiens]
Length = 245
Score = 32.3 bits (72), Expect = 0.26
Identities = 15/45 (33%), Positives = 20/45 (44%)
Query: 89 SSERPANSRPPSRWAPYSPAASQPQSPGDPTPLEQHSGEEPSEEK 133
S + + PPS P SP + P D P + +EP EEK
Sbjct: 170 SPDASPSRAPPSTQEPQSPREGEELKPEDKDPRDPEESKEPKEEK 214
>gi|41281911 Ymer protein long isoform [Homo sapiens]
Length = 482
Score = 32.3 bits (72), Expect = 0.26
Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 35/176 (19%)
Query: 26 ENVARILNRKLLEYAVKEERRQAAHGPPGP----HSDSHSLRDTAEPGAMEELPCSALVR 81
E++AR+L K L+ EE+++ H P P ++DS+ D +PG S R
Sbjct: 110 EDIARLLQEKELQ----EEKKRKKHFPEFPATRAYADSYYYEDGDQPG-------SRRAR 158
Query: 82 SLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTPLEQHSGEEPSEEKPHHDASLH 141
L + FS RP + + + +P+ P E EE H +S
Sbjct: 159 ELGSGFS---RPCRLQRDGKTVKHK--KEKPEHP-----------LENLEEPEQHCSSKR 202
Query: 142 GLSQYNS-LSFAQPH---HRHERNSAQKERSSFLKVKECFFKKHTAAECSTCETEM 193
LS +S PH +HER + +ER + + + EC ET++
Sbjct: 203 SLSSSSSGKGRDNPHINNEQHERKRSTQERPRRPLLPTISGEVFLSTECDDWETKI 258
>gi|20070163 voltage-dependent calcium channel alpha 1G subunit
isoform 1 [Homo sapiens]
Length = 2377
Score = 32.0 bits (71), Expect = 0.35
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 9/118 (7%)
Query: 54 GPHSDSHSLRDTAEPGAMEELPCSALVRSLETCFSSSERPANSRPPSRWA-PYSPAASQP 112
GP S S +AEPGA E+ RS S+ SR SR + +P+ +
Sbjct: 1063 GPASRRTSSSGSAEPGAAHEMKSPPSARSSPHSPWSAASSWTSRRSSRNSLGRAPSLKRR 1122
Query: 113 QSPGDPTPLEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQKERSSF 170
G+ L G+E +E+ S+ S A HRH + ++ +SSF
Sbjct: 1123 SPSGERRSLLSGEGQESQDEEES--------SEEERASPAGSDHRHRGSLEREAKSSF 1172
>gi|236459851 ubinuclein 2 [Homo sapiens]
Length = 1347
Score = 32.0 bits (71), Expect = 0.35
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 66 AEPGAMEELPCSALVRSLETCFSSSER-PANSRPPSRWAPY---SPAASQPQSPGDPTPL 121
AEP + + S VR E + ER P R P R P PA ++P +P +P P
Sbjct: 2 AEPRRVAFISLSP-VRRREAEYPGPEREPEYPREPPRLEPQPYREPARAEPPAPREPAP- 59
Query: 122 EQHSGEEPSEEKP 134
+ + PS EKP
Sbjct: 60 -RSDAQPPSREKP 71
Score = 27.3 bits (59), Expect = 8.5
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 19/85 (22%)
Query: 45 RRQAAHGPPGPHSDSHSLRDTAEPGAMEELPCSALVRSLETCFSSSERPANSRPPSRWAP 104
RR+A + PGP + R EP +E P PA + PP+ P
Sbjct: 17 RREAEY--PGPEREPEYPR---EPPRLEPQPY--------------REPARAEPPAPREP 57
Query: 105 YSPAASQPQSPGDPTPLEQHSGEEP 129
+ +QP S P P + S EP
Sbjct: 58 APRSDAQPPSREKPLPQREVSRAEP 82
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 32.0 bits (71), Expect = 0.35
Identities = 38/139 (27%), Positives = 48/139 (34%), Gaps = 16/139 (11%)
Query: 12 ARQDLPAPRGYTLTENVARILNRKLLEYAVKEERRQAAHGPP--GPHSD--SHSLRDTAE 67
AR+D P T + +AR E + A PP GP S S T E
Sbjct: 160 ARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTE 219
Query: 68 PGAMEELPCSA-------LVRSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP 120
P SA RSL + + PA S P +R P +PA P P P
Sbjct: 220 PSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPA-----HPSQPKP 274
Query: 121 LEQHSGEEPSEEKPHHDAS 139
+ P P DA+
Sbjct: 275 KGLQALRPPQVTPPRKDAA 293
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 32.0 bits (71), Expect = 0.35
Identities = 38/139 (27%), Positives = 48/139 (34%), Gaps = 16/139 (11%)
Query: 12 ARQDLPAPRGYTLTENVARILNRKLLEYAVKEERRQAAHGPP--GPHSD--SHSLRDTAE 67
AR+D P T + +AR E + A PP GP S S T E
Sbjct: 160 ARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTE 219
Query: 68 PGAMEELPCSA-------LVRSLETCFSSSERPANSRPPSRWAPYSPAASQPQSPGDPTP 120
P SA RSL + + PA S P +R P +PA P P P
Sbjct: 220 PSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPA-----HPSQPKP 274
Query: 121 LEQHSGEEPSEEKPHHDAS 139
+ P P DA+
Sbjct: 275 KGLQALRPPQVTPPRKDAA 293
>gi|239746922 PREDICTED: similar to cancer/testis antigen family
147, member B1 isoform 2 [Homo sapiens]
Length = 294
Score = 32.0 bits (71), Expect = 0.35
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 111 QPQSPGDPTPLEQHSGEEPSEEKPHHDASLHGLSQYNSLSFAQPHHRHERNSAQK 165
+P+ P D + + EEP+EEKP +A+ L++ + A+ E SA++
Sbjct: 190 EPEVPADLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEE 244
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.126 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,129,669
Number of Sequences: 37866
Number of extensions: 552312
Number of successful extensions: 3735
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 3219
Number of HSP's gapped (non-prelim): 787
length of query: 196
length of database: 18,247,518
effective HSP length: 97
effective length of query: 99
effective length of database: 14,574,516
effective search space: 1442877084
effective search space used: 1442877084
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.