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Search of human proteins with 239744621
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239744621 PREDICTED: hypothetical protein [Homo sapiens]
(536 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239744621 PREDICTED: hypothetical protein [Homo sapiens] 1107 0.0
gi|239755810 PREDICTED: hypothetical protein [Homo sapiens] 1033 0.0
gi|239750310 PREDICTED: hypothetical protein [Homo sapiens] 1033 0.0
gi|163965366 nascent polypeptide-associated complex alpha subuni... 63 8e-10
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 61 3e-09
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 61 3e-09
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 59 1e-08
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 57 4e-08
gi|110832843 TBP-associated factor 4 [Homo sapiens] 55 1e-07
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 55 2e-07
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 55 2e-07
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 54 3e-07
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 54 3e-07
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 54 3e-07
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 54 3e-07
gi|112421108 capicua homolog [Homo sapiens] 54 3e-07
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 54 5e-07
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 52 1e-06
gi|33286446 opioid growth factor receptor [Homo sapiens] 51 2e-06
gi|113429443 PREDICTED: transmembrane protein 46-like [Homo sapi... 51 2e-06
gi|239755634 PREDICTED: hypothetical protein [Homo sapiens] 49 2e-05
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 49 2e-05
gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ... 49 2e-05
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 49 2e-05
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 49 2e-05
gi|153792074 proline rich 12 [Homo sapiens] 49 2e-05
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 48 2e-05
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 48 3e-05
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 48 3e-05
gi|55750053 atrophin-1 [Homo sapiens] 48 3e-05
>gi|239744621 PREDICTED: hypothetical protein [Homo sapiens]
Length = 536
Score = 1107 bits (2863), Expect = 0.0
Identities = 536/536 (100%), Positives = 536/536 (100%)
Query: 1 MLMKLLGEEQLPLVPGDKWTLKKKLDSLSPSHIVRDEMTSPDPDPASVNSSHLKAGLVPQ 60
MLMKLLGEEQLPLVPGDKWTLKKKLDSLSPSHIVRDEMTSPDPDPASVNSSHLKAGLVPQ
Sbjct: 1 MLMKLLGEEQLPLVPGDKWTLKKKLDSLSPSHIVRDEMTSPDPDPASVNSSHLKAGLVPQ 60
Query: 61 SHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHLPAAALELCRAMLLPGTWFSLNRV 120
SHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHLPAAALELCRAMLLPGTWFSLNRV
Sbjct: 61 SHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHLPAAALELCRAMLLPGTWFSLNRV 120
Query: 121 KESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGS 180
KESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGS
Sbjct: 121 KESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGS 180
Query: 181 GTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGG 240
GTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGG
Sbjct: 181 GTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGG 240
Query: 241 KQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPL 300
KQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPL
Sbjct: 241 KQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPL 300
Query: 301 RSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSG 360
RSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSG
Sbjct: 301 RSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSG 360
Query: 361 GGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGL 420
GGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGL
Sbjct: 361 GGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGL 420
Query: 421 RDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRP 480
RDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRP
Sbjct: 421 RDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRP 480
Query: 481 RAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLEATGTHAGSGTCQGSRG 536
RAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLEATGTHAGSGTCQGSRG
Sbjct: 481 RAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLEATGTHAGSGTCQGSRG 536
>gi|239755810 PREDICTED: hypothetical protein [Homo sapiens]
Length = 499
Score = 1033 bits (2672), Expect = 0.0
Identities = 499/499 (100%), Positives = 499/499 (100%)
Query: 38 MTSPDPDPASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHL 97
MTSPDPDPASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHL
Sbjct: 1 MTSPDPDPASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHL 60
Query: 98 PAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYP 157
PAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYP
Sbjct: 61 PAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYP 120
Query: 158 RPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNR 217
RPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNR
Sbjct: 121 RPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNR 180
Query: 218 EAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLT 277
EAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLT
Sbjct: 181 EAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLT 240
Query: 278 ALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG 337
ALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG
Sbjct: 241 ALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG 300
Query: 338 EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH 397
EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH
Sbjct: 301 EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH 360
Query: 398 PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRP 457
PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRP
Sbjct: 361 PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRP 420
Query: 458 CPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP 517
CPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP
Sbjct: 421 CPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP 480
Query: 518 HLEATGTHAGSGTCQGSRG 536
HLEATGTHAGSGTCQGSRG
Sbjct: 481 HLEATGTHAGSGTCQGSRG 499
>gi|239750310 PREDICTED: hypothetical protein [Homo sapiens]
Length = 499
Score = 1033 bits (2672), Expect = 0.0
Identities = 499/499 (100%), Positives = 499/499 (100%)
Query: 38 MTSPDPDPASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHL 97
MTSPDPDPASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHL
Sbjct: 1 MTSPDPDPASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHL 60
Query: 98 PAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYP 157
PAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYP
Sbjct: 61 PAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYP 120
Query: 158 RPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNR 217
RPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNR
Sbjct: 121 RPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNR 180
Query: 218 EAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLT 277
EAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLT
Sbjct: 181 EAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLT 240
Query: 278 ALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG 337
ALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG
Sbjct: 241 ALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG 300
Query: 338 EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH 397
EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH
Sbjct: 301 EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH 360
Query: 398 PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRP 457
PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRP
Sbjct: 361 PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRP 420
Query: 458 CPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP 517
CPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP
Sbjct: 421 CPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP 480
Query: 518 HLEATGTHAGSGTCQGSRG 536
HLEATGTHAGSGTCQGSRG
Sbjct: 481 HLEATGTHAGSGTCQGSRG 499
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 62.8 bits (151), Expect = 8e-10
Identities = 130/549 (23%), Positives = 171/549 (31%), Gaps = 98/549 (17%)
Query: 43 PDPASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRG---TGAWSPHLPA 99
P P + K G P + +P + SP+GGL H+G T A +P P
Sbjct: 1080 PTPPAATPPSPKGG--PATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPK 1137
Query: 100 AALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYPRP 159
L P T + T S +G G PP AA P P
Sbjct: 1138 GGLATPPPKGAPTT--------PAATPPSPKG-------GLATPPPKGAPTTPAATPPSP 1182
Query: 160 TAGWRRHHSTGQPGAPVL------GGSGTAGNGGQRVSHR--------GICGPSPLQRLG 205
G G P P GG T G + G+ PSP G
Sbjct: 1183 KGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPK---G 1239
Query: 206 GSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSK 265
T A P + + P G P ++ P K A PP +P
Sbjct: 1240 APTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPK- 1298
Query: 266 LGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQAS 325
G A S P P T P P PP + P A + P P+
Sbjct: 1299 ----GGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTP 1354
Query: 326 SSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRG-LRAGPRAPDAG 384
SS GG T + EG + T GG A S RG P+
Sbjct: 1355 SSKGGPTTPSSKEGP----------TPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTS 1404
Query: 385 SFWDPNPQTLAPHPQASRR-----------PRAGCSLSL-QPPHQRGLRDGCPSAAGRLS 432
P AP +R P A +SL + P + G + + +
Sbjct: 1405 PAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGD 1464
Query: 433 PALPA---PSPREVTLGSHVPARVSRRPCPPTPAELN---------------PATSSPR- 473
P LPA PSP+E V S + P TPA + PAT S R
Sbjct: 1465 PTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRR 1524
Query: 474 -PLGPLRPRAGGQSSG---------HPDRTVTSPRPIPARPRPR----TSASRPGPSPHL 519
P+ P ++ P TV SP+ PA P P+ T +S+ SP
Sbjct: 1525 DPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPA 1584
Query: 520 EATGTHAGS 528
T+ G+
Sbjct: 1585 VTPSTYKGA 1593
Score = 39.3 bits (90), Expect = 0.009
Identities = 99/406 (24%), Positives = 136/406 (33%), Gaps = 66/406 (16%)
Query: 143 PPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVL---GGSGTAGNGGQRVSHRGICGPS 199
PP+ P AA P P G P P + GT S +G GP+
Sbjct: 1305 PPKGAPTPPAATP-PSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKG--GPT 1361
Query: 200 PLQRLGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFS 259
G T A P ++ P + GP P G T+P P+ + +
Sbjct: 1362 TPSSKEGPTPPAATPSHKGGPAMTPPSP--KRGPAIPSPKG-DPTSPAVIPLSPKKAPAT 1418
Query: 260 PLFSSKLGIHGDRAGSLTALRPNP-DLVTVPLTAHP---PVHPPLRSGPPLGAGSRPRAL 315
P+ ++ G G LT P L P T+ P P P + P L A + P
Sbjct: 1419 PV--TREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPK 1476
Query: 316 CPAQTPSQASSSGGGRG-TSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGL 374
P A+SS + + A G TL + + +
Sbjct: 1477 EPPAPKQVATSSSPKKAPATPAPMGAP--------------TLPAVIPSSPKEVPATPSS 1522
Query: 375 RAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPA 434
R P AP A P TLAP +L PP PS + +PA
Sbjct: 1523 RRDPIAPTATLLSKKTPATLAPKE------------ALIPPAMT-----VPSP--KKTPA 1563
Query: 435 LPAP-----SPREVTLGSHVPARVSRRPCPPTPAEL--NPATSSPRPLGPLRPRAGGQSS 487
+P P +P S S P+P EL PA +SP P P
Sbjct: 1564 IPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTP------- 1616
Query: 488 GHPDRTVTSPRPIPARPRPRTSASRPGPSP-HLEATGTHAGSGTCQ 532
P T SP PA P P+ + + P +P L+ + T S TC+
Sbjct: 1617 --PAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCK 1660
Score = 38.9 bits (89), Expect = 0.012
Identities = 75/310 (24%), Positives = 106/310 (34%), Gaps = 50/310 (16%)
Query: 240 GKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNPD-----LVTVPLTAHP 294
G AP PV+ PL + A + P+P L T+ L
Sbjct: 679 GTVSLAPKNHPVKEGTLTTLPLVPT--------ASENCPVAPSPQNTCAPLATLVLAPEI 730
Query: 295 PVHPPLRSGPPLGAG---------SRPRALCP-AQTPSQASSSGGGRGTSGAGEGHQHLL 344
P P S PP G S AL P A +P + + G + + +G
Sbjct: 731 PKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSGASATASSKG----- 785
Query: 345 ITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQAS--- 401
T L++ L + R +G AGP P +P + P+ S
Sbjct: 786 -TLTYLADSPSPLGVSVSPQTKRPPTKKG-SAGPDTPIGNLSSPVSPVEASFLPENSLSF 843
Query: 402 --RRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHV----PARVSR 455
+ + S PP +G PSA LSP P+E S V P
Sbjct: 844 QGSKDSPATTHSPTPPSPKGAPT--PSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPA 901
Query: 456 RPCPPTPAELNPATSSPR-------PLG-PLRPRAGGQSSGHPDRTVTSPRPIPARPRPR 507
P P L+ +SSP+ P G P P G + P T SP+ PA P P+
Sbjct: 902 TPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTP-PAATPPSPKGGPATPSPK 960
Query: 508 TSASRPGPSP 517
+ + P +P
Sbjct: 961 WAPTPPAATP 970
Score = 38.1 bits (87), Expect = 0.020
Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 25/156 (16%)
Query: 380 APDAGSFWDPNPQ---TLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGR-LSPAL 435
AP + P+P+ P P+ + P A PP +G P G +PA
Sbjct: 1008 APTPPAVTPPSPKGSPAATPFPKGASTPPAAT-----PPSPKGSPAATPLPKGAPTTPAA 1062
Query: 436 PAPSPR----------EVTLGSHVPARVSRRPCPPTP--AELNPATSSPRPLGPLR--PR 481
PSP+ T + P P P+P A + PA + P P G L P
Sbjct: 1063 TLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPH 1122
Query: 482 AGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP 517
G ++ P T SP+ A P P+ + + P +P
Sbjct: 1123 KGAPTT--PAATPPSPKGGLATPPPKGAPTTPAATP 1156
Score = 35.4 bits (80), Expect = 0.13
Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 12/136 (8%)
Query: 389 PNPQTL-APHPQ---ASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVT 444
P P + P P+ A+ P+ +LS+ + R P+ G PA P+P T
Sbjct: 886 PTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKAR-ATPAPKG--IPASPSPKGAP-T 941
Query: 445 LGSHVPARVSRRPCPPTP--AELNPATSSPRPLG-PLRPRAGGQSSGHPDRTVTSPRPIP 501
+ P P P+P A PA + P P G P P G + P T SP+ P
Sbjct: 942 PPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTP-PAATPPSPKGGP 1000
Query: 502 ARPRPRTSASRPGPSP 517
A P P+ + + P +P
Sbjct: 1001 ATPSPKGAPTPPAVTP 1016
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 60.8 bits (146), Expect = 3e-09
Identities = 116/450 (25%), Positives = 157/450 (34%), Gaps = 72/450 (16%)
Query: 111 PGTWFSLNRVKESITAKSRRGKVLLEGT---GKEVPPRPLPAARAAARYPRPTAGWRRHH 167
P T+ N K ++ + G+ L GK++ + + R+A +P
Sbjct: 12 PPTFALANTEKPTLNKTEQAGRNALLSDISKGKKLK-KTVTNDRSAPILDKPKGAGAGGG 70
Query: 168 STGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNREAHLRRKPRV 227
G G GG G G GG G GP L G +A P+ R R
Sbjct: 71 GGGFGGGGGFGGGGGGGGGGSF----GGGGPPGL----GGLFQAGMPKLRSTANRDNDSG 122
Query: 228 GLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPN----P 283
G P PGG+ +A P P F P + G + + RP+ P
Sbjct: 123 GSRPPLLP--PGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKP 180
Query: 284 DLVTVPLTAHP-PVH--PPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTS-GAGEG 339
D + P+ + P P+ P R PP+ G PR P TP G RGT+ G G
Sbjct: 181 DSIPPPVPSTPRPIQSSPHNRGSPPVPGG--PRQPSPGPTPPPFP---GNRGTALGGGSI 235
Query: 340 HQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGL--RAGPRAPDAGSFWDPNPQTLAPH 397
Q L + SN + + R L + P P G+ + + + P
Sbjct: 236 RQSPLSSSSPFSNR----------PPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPP 285
Query: 398 PQASRRP------RAGCSLSLQPPHQRGLRDGCP-----SAAGRLSPALPAPSPREVTLG 446
P + +P R S PP R G P S+ +P LP R ++L
Sbjct: 286 PPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQ---RNLSLS 342
Query: 447 SHVPARVS---RRPCPPTPAELNP--ATSSPRPLGPLRPRAGGQSSGHPDRT-------- 493
S P S P PP P+E P P GPL P +G R
Sbjct: 343 SSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLP 402
Query: 494 ----VTSPRPIPARPRP--RTSASRPGPSP 517
V SPR P P P R SA P P P
Sbjct: 403 SRSGVDSPRSGPRPPLPPDRPSAGAPPPPP 432
Score = 41.6 bits (96), Expect = 0.002
Identities = 86/334 (25%), Positives = 104/334 (31%), Gaps = 91/334 (27%)
Query: 144 PRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQR 203
PRP+ ++ P P G R S G P G GTA GG SPL
Sbjct: 191 PRPIQSSPHNRGSP-PVPGGPRQPSPGPTPPPFPGNRGTALGGGS-------IRQSPLSS 242
Query: 204 LGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFS 263
+ P P L KP P P + P +E PPP P Q P+ S
Sbjct: 243 SSPFSNRPPLPPTPSRALDDKPPP--PPPPVGNRPSIHREAVPPPPP----QNNKPPVPS 296
Query: 264 SKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQ 323
+ P P + A PP PP R GPP P
Sbjct: 297 T----------------PRPSASS---QAPPPPPPPSRPGPP---------------PLP 322
Query: 324 ASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDA 383
SSSG + L LS+ L S G R+GP P
Sbjct: 323 PSSSGN--------DETPRLPQRNLSLSSSTPPLPSPG-------------RSGPLPP-- 359
Query: 384 GSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREV 443
P + P P P L PP R +G S A +P LP+ S
Sbjct: 360 -------PPSERPPPPVRDPPGRSGPLPPPPPVSR---NGSTSRALPATPQLPSRS---- 405
Query: 444 TLGSHVPARVSRRPCPPTPAELNPATSSPRPLGP 477
G P R P PP P+ +P P P
Sbjct: 406 --GVDSPRSGPRPPLPPD----RPSAGAPPPPPP 433
Score = 40.0 bits (92), Expect = 0.005
Identities = 57/254 (22%), Positives = 76/254 (29%), Gaps = 31/254 (12%)
Query: 295 PVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTS----GAGEGHQHLLITYRVL 350
PV PP PP AL + P+ + GR G+ + + R
Sbjct: 2 PVPPPPAPPPP-----PTFALANTEKPTLNKTEQAGRNALLSDISKGKKLKKTVTNDRSA 56
Query: 351 SNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSL 410
L + +G G G G G GSF P L QA
Sbjct: 57 PILDKPKGAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGM-------- 108
Query: 411 SLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATS 470
P R + + G P LP P+ R P P P
Sbjct: 109 ----PKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEP 164
Query: 471 SPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPR----------PRTSASRPGPSPHLE 520
+ P RP G + P ++PRPI + P PR + P P P
Sbjct: 165 QRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPG 224
Query: 521 ATGTHAGSGTCQGS 534
GT G G+ + S
Sbjct: 225 NRGTALGGGSIRQS 238
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 60.8 bits (146), Expect = 3e-09
Identities = 116/450 (25%), Positives = 157/450 (34%), Gaps = 72/450 (16%)
Query: 111 PGTWFSLNRVKESITAKSRRGKVLLEGT---GKEVPPRPLPAARAAARYPRPTAGWRRHH 167
P T+ N K ++ + G+ L GK++ + + R+A +P
Sbjct: 12 PPTFALANTEKPTLNKTEQAGRNALLSDISKGKKLK-KTVTNDRSAPILDKPKGAGAGGG 70
Query: 168 STGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNREAHLRRKPRV 227
G G GG G G GG G GP L G +A P+ R R
Sbjct: 71 GGGFGGGGGFGGGGGGGGGGSF----GGGGPPGL----GGLFQAGMPKLRSTANRDNDSG 122
Query: 228 GLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPN----P 283
G P PGG+ +A P P F P + G + + RP+ P
Sbjct: 123 GSRPPLLP--PGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKP 180
Query: 284 DLVTVPLTAHP-PVH--PPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTS-GAGEG 339
D + P+ + P P+ P R PP+ G PR P TP G RGT+ G G
Sbjct: 181 DSIPPPVPSTPRPIQSSPHNRGSPPVPGG--PRQPSPGPTPPPFP---GNRGTALGGGSI 235
Query: 340 HQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGL--RAGPRAPDAGSFWDPNPQTLAPH 397
Q L + SN + + R L + P P G+ + + + P
Sbjct: 236 RQSPLSSSSPFSNR----------PPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPP 285
Query: 398 PQASRRP------RAGCSLSLQPPHQRGLRDGCP-----SAAGRLSPALPAPSPREVTLG 446
P + +P R S PP R G P S+ +P LP R ++L
Sbjct: 286 PPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQ---RNLSLS 342
Query: 447 SHVPARVS---RRPCPPTPAELNP--ATSSPRPLGPLRPRAGGQSSGHPDRT-------- 493
S P S P PP P+E P P GPL P +G R
Sbjct: 343 SSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLP 402
Query: 494 ----VTSPRPIPARPRP--RTSASRPGPSP 517
V SPR P P P R SA P P P
Sbjct: 403 SRSGVDSPRSGPRPPLPPDRPSAGAPPPPP 432
Score = 41.6 bits (96), Expect = 0.002
Identities = 86/334 (25%), Positives = 104/334 (31%), Gaps = 91/334 (27%)
Query: 144 PRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQR 203
PRP+ ++ P P G R S G P G GTA GG SPL
Sbjct: 191 PRPIQSSPHNRGSP-PVPGGPRQPSPGPTPPPFPGNRGTALGGGS-------IRQSPLSS 242
Query: 204 LGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFS 263
+ P P L KP P P + P +E PPP P Q P+ S
Sbjct: 243 SSPFSNRPPLPPTPSRALDDKPPP--PPPPVGNRPSIHREAVPPPPP----QNNKPPVPS 296
Query: 264 SKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQ 323
+ P P + A PP PP R GPP P
Sbjct: 297 T----------------PRPSASS---QAPPPPPPPSRPGPP---------------PLP 322
Query: 324 ASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDA 383
SSSG + L LS+ L S G R+GP P
Sbjct: 323 PSSSGN--------DETPRLPQRNLSLSSSTPPLPSPG-------------RSGPLPP-- 359
Query: 384 GSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREV 443
P + P P P L PP R +G S A +P LP+ S
Sbjct: 360 -------PPSERPPPPVRDPPGRSGPLPPPPPVSR---NGSTSRALPATPQLPSRS---- 405
Query: 444 TLGSHVPARVSRRPCPPTPAELNPATSSPRPLGP 477
G P R P PP P+ +P P P
Sbjct: 406 --GVDSPRSGPRPPLPPD----RPSAGAPPPPPP 433
Score = 40.0 bits (92), Expect = 0.005
Identities = 57/254 (22%), Positives = 76/254 (29%), Gaps = 31/254 (12%)
Query: 295 PVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTS----GAGEGHQHLLITYRVL 350
PV PP PP AL + P+ + GR G+ + + R
Sbjct: 2 PVPPPPAPPPP-----PTFALANTEKPTLNKTEQAGRNALLSDISKGKKLKKTVTNDRSA 56
Query: 351 SNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSL 410
L + +G G G G G GSF P L QA
Sbjct: 57 PILDKPKGAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGM-------- 108
Query: 411 SLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATS 470
P R + + G P LP P+ R P P P
Sbjct: 109 ----PKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEP 164
Query: 471 SPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPR----------PRTSASRPGPSPHLE 520
+ P RP G + P ++PRPI + P PR + P P P
Sbjct: 165 QRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPG 224
Query: 521 ATGTHAGSGTCQGS 534
GT G G+ + S
Sbjct: 225 NRGTALGGGSIRQS 238
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 58.5 bits (140), Expect = 1e-08
Identities = 131/508 (25%), Positives = 159/508 (31%), Gaps = 111/508 (21%)
Query: 40 SPDPDPASVNSSHLKAGLVPQSHTPGRLVLAVL-LQSLSPEGGLRA--AEHRGTGAWSPH 96
+P P P + + P H+P VL L SP R G G+
Sbjct: 1373 APQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKS 1432
Query: 97 LPAAALELCRAML--LPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAA 154
LPA+ R++L LP T + G +LL+ G E PP P P
Sbjct: 1433 LPASPPAARRSLLHRLPPTAPGV-------------GPLLLQ-LGTE-PPAPHPGVSKPW 1477
Query: 155 RYPRPTAGWR-----RHHSTGQPGAPVLGGSGTAGNGGQRV---SHRGICGPSPLQRLGG 206
R P R R QP APV G G G V S R PSP
Sbjct: 1478 RSAAPEEPERLPLHVRFLENCQPRAPVTSGRGPPSEDGPGVPPPSPRRSVPPSPTSPRAS 1537
Query: 207 STGEAPR------------------------PRNREAHLRRKPRVGLEPGPHSSLPGGKQ 242
P P ++ KP L PGP LP
Sbjct: 1538 EENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDTPA 1597
Query: 243 ETAP-PPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHP-PVHPPL 300
P PP P P ++ A SLT+ +T +A P HPP
Sbjct: 1598 PATPLPPVP--------PPAVAAAPPTLDSTASSLTSYDSEVATLTQGASAAPGDPHPP- 1648
Query: 301 RSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSG 360
GPP A P A P P + SG S + H L T S L G
Sbjct: 1649 --GPPAPAAPAPAAPQPGPDPPPGTDSGIEEVDSRSSSDHP--LETISSASTLSSLSAEG 1704
Query: 361 GGVASMRISVGRGLRAGPRAPDA----------GSFWDPN----PQTLAPHPQASRRPRA 406
GG A G G+ +GP D G P PQ + P R
Sbjct: 1705 GGSAGGGGGAGAGVASGPELLDTYVAYLDGQAFGGSSTPGPPYPPQLMTPSKLRGR--AL 1762
Query: 407 GCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPC--PPT--- 461
G S L+P GLRD P P SP G+ ++ R C PPT
Sbjct: 1763 GASGGLRPGPSGGLRD----------PVTPT-SPTVSVTGAGTDGLLALRACSGPPTAGV 1811
Query: 462 ------------PAELNPATSSPRPLGP 477
P L A+S PR L P
Sbjct: 1812 AGGPVAVEPEVPPVPLPTASSLPRKLLP 1839
Score = 42.7 bits (99), Expect = 8e-04
Identities = 89/391 (22%), Positives = 121/391 (30%), Gaps = 98/391 (25%)
Query: 140 KEVPPRPL--PAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICG 197
+++PP P P + P P+ S+G+ GG G+GG
Sbjct: 918 EDIPPPPTTSPPEPPYSTPPVPS-------SSGRLTPSPRGGPFNPGSGG---------- 960
Query: 198 PSPLQRLGGSTGEAPRPRNREAHLRRKP--RVGLEPGPHSSLPGGKQETAPPPQPVRTTQ 255
PL ++ + P P + R K G P H P APPPQP
Sbjct: 961 --PLPASSPASFDGPSPPDTRVGSREKSLYHSGPLPPAHHHPPHHHHHHAPPPQP----- 1013
Query: 256 TFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRAL 315
H A HPP P + +G P L
Sbjct: 1014 -------------HHHHA-------------------HPPHPPEMETGG--SPDDPPPRL 1039
Query: 316 CPAQTPSQASSSGGGRG-TSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGL 374
PS GGG T GA H +GGG S + R
Sbjct: 1040 ALGPQPSLRGWRGGGPSPTPGAPSPSHHG--------------SAGGGGGSSQGPALRYF 1085
Query: 375 RAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLS---LQPPHQRGLRDGCPSAAGRL 431
+ PRA A + P S R R G + ++ Q+G G P A
Sbjct: 1086 QLPPRAASAAMYV----------PARSGRGRKGPLVKQTKVEGEPQKG--GGLPPAPSPT 1133
Query: 432 SPALPAPSPREVTLGSH----VPARVSRRPCPPTPAELNPATSSP-RPLGPLRPRAGGQS 486
SPA P P P +P + + P + + +S+ P P GG
Sbjct: 1134 SPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEPTGGGGG 1193
Query: 487 SGHPDRTVTSPRPIPARPRP-RTSASRPGPS 516
G + P+P P P T AS GP+
Sbjct: 1194 GGSSPSPAPAMSPVPPSPSPVPTPASPSGPA 1224
Score = 41.6 bits (96), Expect = 0.002
Identities = 45/163 (27%), Positives = 55/163 (33%), Gaps = 23/163 (14%)
Query: 389 PNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPA----PSPREVT 444
P P T P P S P S L P + G + P + G L + PA PSP +
Sbjct: 922 PPPTTSPPEPPYSTPPVPSSSGRLTPSPRGGPFN--PGSGGPLPASSPASFDGPSPPDTR 979
Query: 445 LGSHVPARVSRRPCPPT-----------PAELNPATSSPRPLGPLRPRAGGQSSGHPDRT 493
+GS + P PP P P P GG P R
Sbjct: 980 VGSREKSLYHSGPLPPAHHHPPHHHHHHAPPPQPHHHHAHPPHPPEMETGGSPDDPPPRL 1039
Query: 494 VTSPRPIPARPR---PRTSASRPGPSPHLEATGTHAGSGTCQG 533
P+P R P + P PS H A G G G+ QG
Sbjct: 1040 ALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGG---GGGSSQG 1079
Score = 40.8 bits (94), Expect = 0.003
Identities = 91/389 (23%), Positives = 117/389 (30%), Gaps = 70/389 (17%)
Query: 179 GSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRN--------REAHLRRKPRVGLE 230
GS G GG + P PL + TG+A P + RE L+ G
Sbjct: 1316 GSRAYGGGGGSSAFTSFLPPRPL--VHPLTGKALDPASPLGLALAARERALKESSEGGGA 1373
Query: 231 PGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPL 290
P P P + E PP + P+ D A R L
Sbjct: 1374 PQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKSL 1433
Query: 291 TAHPPV--HPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYR 348
A PP L PP G P L P S A E + L + R
Sbjct: 1434 PASPPAARRSLLHRLPPTAPGVGPLLLQLGTEPPAPHPGVSKPWRSAAPEEPERLPLHVR 1493
Query: 349 VLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRA-- 406
L N + ++ GRG P + D P+P+ P S PRA
Sbjct: 1494 FLENCQ---------PRAPVTSGRG----PPSEDGPGVPPPSPRRSVPPSPTS--PRASE 1538
Query: 407 --GCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAE 464
G L + PP + G P P P E + P P TP
Sbjct: 1539 ENGLPLLVLPPPAPSV----DVEDGEFLFVEPLPPPLEFSNSFEKPES------PLTPGP 1588
Query: 465 LNPATSSPRPLGPLRPRAGGQSSGHP---DRTVTS-----------------------PR 498
+P +P P PL P + P D T +S P
Sbjct: 1589 PHPLPDTPAPATPLPPVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGASAAPGDPHPP 1648
Query: 499 PIPARPRPRTSASRPGPSPHLEATGTHAG 527
PA P +A +PGP P GT +G
Sbjct: 1649 GPPAPAAPAPAAPQPGPDP---PPGTDSG 1674
Score = 38.1 bits (87), Expect = 0.020
Identities = 49/162 (30%), Positives = 60/162 (37%), Gaps = 15/162 (9%)
Query: 378 PRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLS--PAL 435
P GS DP P+ LA PQ S R G S P G G S PAL
Sbjct: 1024 PEMETGGSPDDPPPR-LALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGGGGGSSQGPAL 1082
Query: 436 P--APSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRT 493
PR + +VPAR R P + G P+ GG P T
Sbjct: 1083 RYFQLPPRAASAAMYVPARSGR-------GRKGPLVKQTKVEG--EPQKGGGLPPAPSPT 1133
Query: 494 V-TSPRPIPARPRPRTSASRPGPSPHLEATGTHAGSGTCQGS 534
SP+P PA P S P P+ ++A T + + QGS
Sbjct: 1134 SPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGS 1175
Score = 35.8 bits (81), Expect = 0.10
Identities = 100/432 (23%), Positives = 136/432 (31%), Gaps = 87/432 (20%)
Query: 142 VPPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGI------ 195
VPP P P A+ T + T Q GA ++G + G R
Sbjct: 1207 VPPSPSPVPTPASPSGPATLDF-----TSQFGAALVGAARREGGWQNEARRRSTLFLSTD 1261
Query: 196 CGPSPLQRLGGSTGEAPRPRNR------EAHLRRKPRVGLEP----------GPHSSLPG 239
G G TG AP PR R E +P + LE G S G
Sbjct: 1262 AGDEDGGDGGLGTGAAPGPRLRHSKSIDEGMFSAEPYLRLESAGSGAGYGGYGAGSRAYG 1321
Query: 240 GKQETAP-----PPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHP 294
G ++ PP+P+ T + +S LG+ A AL+ + + P
Sbjct: 1322 GGGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLA--LAARERALKESSEGGGAPQPPPR 1379
Query: 295 PVHPPLRSGPPLGAGSRPRA-------LCPAQTPSQASSSGGGRGTSGAGEGHQHLLITY 347
P P + PP P A L A P A G R G+ E
Sbjct: 1380 PPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKSLPASPPA 1439
Query: 348 RVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAG------SFWDPNPQTLAPHPQ-- 399
S L R + GV + + +G P AP G S P+ L H +
Sbjct: 1440 ARRSLLHRLPPTAPGVGPLLLQLG----TEPPAPHPGVSKPWRSAAPEEPERLPLHVRFL 1495
Query: 400 ASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCP 459
+ +PRA + PP + G P +P PSPR R P
Sbjct: 1496 ENCQPRAPVTSGRGPPSEDG-------------PGVPPPSPR--------------RSVP 1528
Query: 460 PTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIP-------ARPRPRTSASR 512
P+P + + PL L P A + P P P +P +
Sbjct: 1529 PSPTSPRASEENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGP 1588
Query: 513 PGPSPHLEATGT 524
P P P A T
Sbjct: 1589 PHPLPDTPAPAT 1600
Score = 34.3 bits (77), Expect = 0.29
Identities = 37/119 (31%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 137 GTGKEVPPRPLPAARAAARYPRPTA-GWRRHHSTGQPGAPVLGGSGTAGNGG---QRVSH 192
G+ + PPR A P+P+ GWR + PGAP G+AG GG Q +
Sbjct: 1030 GSPDDPPPR-------LALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGGGGGSSQGPAL 1082
Query: 193 RGICGPSPLQRLGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAP-PPQP 250
R P P A R R+ L ++ +V EP LP T+P PQP
Sbjct: 1083 RYFQLP-PRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSPTSPASPQP 1140
Score = 33.9 bits (76), Expect = 0.38
Identities = 88/356 (24%), Positives = 112/356 (31%), Gaps = 84/356 (23%)
Query: 59 PQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHLPAAALELCRAMLLPGTWFSLN 118
PQ TP +L ++L GGLR G P P + G +L
Sbjct: 1749 PQLMTPSKL----RGRALGASGGLRPGPSGGLR--DPVTPTSPTVSVTGAGTDGL-LALR 1801
Query: 119 RVKESITAKSRRGKVLLEGTGKEVPPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLG 178
TA G V +E EVPP PLP A+ PR W G P P+ G
Sbjct: 1802 ACSGPPTAGVAGGPVAVE---PEVPPVPLP---TASSLPRKLLPW--EEGPGPPPPPLPG 1853
Query: 179 GSGTAGNGGQRVSHRGICG--PSPLQRLGGST---------------------GEAPRPR 215
I S LQ+ GGS+ G A
Sbjct: 1854 PLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGGGDSHHGGASYVP 1913
Query: 216 NREAHLRRK-----PRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHG 270
R + L+R+ + L P SSL Q PP P T T SP ++ G
Sbjct: 1914 ERTSSLQRQRLSDDSQSSLLSKPVSSL---FQNWPKPPLPPLPTGTGVSPTAAAAPGATS 1970
Query: 271 DRAGS------------------LTALRPNPDLV--------------TVPLTAHPPVHP 298
A S L P+P L+ ++P+ P++P
Sbjct: 1971 PSASSSSTSTRHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPLYP 2030
Query: 299 PL---RSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLS 351
L R P GAG P P SG G GA G L R+LS
Sbjct: 2031 GLFDIRGSPTGGAGGSADPFAPVFVPPHPGISG---GLGGALSGASRSLSPTRLLS 2083
Score = 32.7 bits (73), Expect = 0.86
Identities = 135/574 (23%), Positives = 181/574 (31%), Gaps = 151/574 (26%)
Query: 77 SPEGGLRAAEHRGT---GAWSPHLPAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKV 133
SP G + H G+ G S PA R LP S + + + R+G +
Sbjct: 1056 SPTPGAPSPSHHGSAGGGGGSSQGPAL-----RYFQLPPRAASAAMYVPARSGRGRKGPL 1110
Query: 134 L----LEGT---GKEVPPRPLPAARAAARYPRPTAGWRRHH------------STGQPGA 174
+ +EG G +PP P P + A+ + P A + ST G
Sbjct: 1111 VKQTKVEGEPQKGGGLPPAPSPTSPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGR 1170
Query: 175 PVLGGS------------GTAGNGGQRVSHRGICG---------PSPLQRLGGST----- 208
G S G G GG S P+P G +T
Sbjct: 1171 SSQGSSTEAEPPTQPEPTGGGGGGGSSPSPAPAMSPVPPSPSPVPTPASPSGPATLDFTS 1230
Query: 209 -------GEAPRPRNREAHLRRKPRVGL--EPGPHSSLPGGKQETAPPPQPVRTTQTFFS 259
G A R + RR+ + L + G GG A P +R +++
Sbjct: 1231 QFGAALVGAARREGGWQNEARRRSTLFLSTDAGDEDGGDGGLGTGAAPGPRLRHSKSIDE 1290
Query: 260 PLFSSKLGIHGDRAGSLTAL------------RPNPDLVTVPLTAHPPVHP----PLRSG 303
+FS++ + + AGS T L P VHP L
Sbjct: 1291 GMFSAEPYLRLESAGSGAGYGGYGAGSRAYGGGGGSSAFTSFLPPRPLVHPLTGKALDPA 1350
Query: 304 PPLGAGSRPRALCPAQTPSQASSSGGG------RGTSGAGEG----------HQHLLITY 347
PLG AL + + SS GGG R S E H H
Sbjct: 1351 SPLGL-----ALAARERALKESSEGGGAPQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVL 1405
Query: 348 RVL-----SNLRRTLCSGGGVASMRISV-------GRGL--RAGPRAPDAGS-FWDPNPQ 392
R+ RR L G+ S S+ R L R P AP G +
Sbjct: 1406 RLWGASPPDPARRELGYRAGLGSQEKSLPASPPAARRSLLHRLPPTAPGVGPLLLQLGTE 1465
Query: 393 TLAPHPQASRRPRAGCSLSLQ--PPHQRGLRDGCPSA---AGR-----LSPALPAPSPRE 442
APHP S+ R+ + P H R L + P A +GR P +P PSPR
Sbjct: 1466 PPAPHPGVSKPWRSAAPEEPERLPLHVRFLENCQPRAPVTSGRGPPSEDGPGVPPPSPRR 1525
Query: 443 VTLGSHVPARVSRR----------PCP-------------PTPAELNPATSSPRPLGPLR 479
S R S P P P P L + S +P PL
Sbjct: 1526 SVPPSPTSPRASEENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLT 1585
Query: 480 PRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRP 513
P G PD T P+P P P +A+ P
Sbjct: 1586 P---GPPHPLPD-TPAPATPLPPVPPPAVAAAPP 1615
Score = 31.6 bits (70), Expect = 1.9
Identities = 46/158 (29%), Positives = 56/158 (35%), Gaps = 27/158 (17%)
Query: 388 DPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCP--------SAAGRLSPALPAPS 439
D P +P A RR G L++ P R D SA G S P P
Sbjct: 406 DVVPFQESPKYAARRRGPPGTGLTVPPALLRANSDTSMALPDWMVFSAPGAASSGAPGP- 464
Query: 440 PREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSG-HPDRTVTSPR 498
T GS ++ S P T S+ P G RA S G HP+ PR
Sbjct: 465 ----TSGSQGQSQPS---APTTKLSSGTLRSASSPRGA---RARSPSRGRHPEDAKRQPR 514
Query: 499 PIPARPRPRTSASRPGPSPHLEATGTHAGSGTCQGSRG 536
P+ + R GP+ TG G G GSRG
Sbjct: 515 GRPSS----SGTPREGPAG---GTGGSGGPGGSLGSRG 545
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 57.0 bits (136), Expect = 4e-08
Identities = 110/427 (25%), Positives = 148/427 (34%), Gaps = 74/427 (17%)
Query: 126 AKSRRGKVLLEGTGKEVP-PRPLPAARAA--ARYPRPTAGWRRHHSTGQPGAPVLGGSGT 182
A +RR + G EV PRP P+AR PR + HST +P +P +
Sbjct: 175 AMARRSRA----AGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEP-SPAARRRPS 229
Query: 183 AGNGGQRVSHRGICGPS-PLQ---RLGGSTGEAPRPRNREAHLRRKPRVGLEP------- 231
AG G QR + R + + PL R G S PR + + K L P
Sbjct: 230 AGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPR 289
Query: 232 -------GPHSSLP-------GGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLT 277
GP SS P G K PPP T P S L A
Sbjct: 290 KDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPP-SPPLATPLPLAPPSP 348
Query: 278 ALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG 337
+ P+ + P P PP + PP+ A + + P Q P +S S
Sbjct: 349 SAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPL- 407
Query: 338 EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH 397
LS+L+ T G S L PR A +P A
Sbjct: 408 -----------ALSSLQATTSLGSPTLQATHSF---LTMSPRQTQASL---TSPSRPAST 450
Query: 398 PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPAL-PAPSPREVTLGSHVPARVSRR 456
P S +A SL PP Q LSPA+ P SP + + + S
Sbjct: 451 PPDSPPLQAPLSLPASPPLQTS-----------LSPAVSPLSSPLTIHPLQALSSLASHS 499
Query: 457 PCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSP--RPIPA-RPRPRTSASRP 513
P P + + P + L P S P ++T+P +P+ P P +AS P
Sbjct: 500 PQAPLSSLIMPPLETQSSLAP-------PSLQTPPASLTTPPLENLPSLAPPPLQTASAP 552
Query: 514 GPSPHLE 520
+PHLE
Sbjct: 553 LTTPHLE 559
Score = 55.5 bits (132), Expect = 1e-07
Identities = 89/340 (26%), Positives = 104/340 (30%), Gaps = 65/340 (19%)
Query: 198 PSPLQRLGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTF 257
PSP S P PR L P + + P P +SLP PP P
Sbjct: 739 PSPPASPPMSPSATPPPR--VPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPP 796
Query: 258 FSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCP 317
L S G S P+ L PL PP PP+ + P L P A
Sbjct: 797 LQALPSPPASFPGQAPFS-----PSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPT 851
Query: 318 AQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAG 377
Q P + + G SG R TL L G
Sbjct: 852 LQAPRRPPTPGPDTSVSGP-----------------RLTL---------------ALAPG 879
Query: 378 PRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSL--QPPHQRGLRDGCPSAAGRLSPAL 435
P P P + +P S AG S S P RG G P SP
Sbjct: 880 P----------PPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSG-PEGGAAASP-- 926
Query: 436 PAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVT 495
P + L + PA SR P PP P P P P G S+
Sbjct: 927 ----PPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWP-----PATGPGSADGLCTIYE 977
Query: 496 SPRPIPARPRPRTSASRPGPSPHLEATGTHAGSGTCQGSR 535
+ P A P P A PGPSP AG+G SR
Sbjct: 978 TEGPESATPAP--GALDPGPSPGTSGGKAAAGAGAGASSR 1015
Score = 51.2 bits (121), Expect = 2e-06
Identities = 106/398 (26%), Positives = 127/398 (31%), Gaps = 61/398 (15%)
Query: 148 PAARAAARY-PRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICG---PSPLQR 203
PAARA PRP R VLG +G G GI G P R
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR 76
Query: 204 LG-------GSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPP-------- 248
G S A RP R P PGP SS T P P
Sbjct: 77 AGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRI 136
Query: 249 ---QPVRTTQTFFSPLFSS-KLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGP 304
+ V + +P S+ G D +G T P+P + A V P P
Sbjct: 137 SAEETVARGKATEAPKRSALSAGARRDTSGP-TPGTPSPAMARRSRAAGTEVGLPR---P 192
Query: 305 PLGAGSRPRALCPAQTPSQASS------SGGGRGTSGAGEGHQHLLITYRVLSNLRRTLC 358
A RP P ++ S AS S R AG G Q R+L
Sbjct: 193 APSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQR---------PASRSLS 243
Query: 359 SGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQR 418
S S G R PRAP S P P+ L QA R P+ + PP
Sbjct: 244 SSATPLSSPARSGPSARGTPRAPAHPS--QPKPKGL----QALRPPQ------VTPPR-- 289
Query: 419 GLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPL 478
+D P+ S L PSP P + P P T +P ++P PL P
Sbjct: 290 --KDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPP-SPPLATPLPLAPP 346
Query: 479 RPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPS 516
P A P T P P P T + PS
Sbjct: 347 SPSAPPSLQTLPSPPATPPSQAP--PSMTTPPMQAPPS 382
Score = 36.6 bits (83), Expect = 0.059
Identities = 81/326 (24%), Positives = 101/326 (30%), Gaps = 54/326 (16%)
Query: 214 PRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPL---FSSKLGIHG 270
PR +A L R P L A PP QT SP SS L IH
Sbjct: 434 PRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPP-----LQTSLSPAVSPLSSPLTIHP 488
Query: 271 DRAGSLTALR----PNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASS 326
+A S A P L+ PL + PP PP + P P+ P +
Sbjct: 489 LQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQT 548
Query: 327 SGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSF 386
+ T +L C A + P S
Sbjct: 549 ASAPLTTP-----------------HLETPPCP----APCPLQAPPSPLTTPPPETPSSI 587
Query: 387 WDPNPQT----LAP----------HPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLS 432
P PQ +P P A+ P+A L+L PP Q P A+ LS
Sbjct: 588 ATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLAL-PPLQA---PPSPPASPPLS 643
Query: 433 P-ALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPD 491
P A P+P + A S P PP A +P S P P S P
Sbjct: 644 PLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPP 703
Query: 492 RTVTSPRPIPARPRPRTSASRPGPSP 517
V P PA P SA+ P +P
Sbjct: 704 LQV--PPSPPASPPMSPSATPPPQAP 727
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 55.5 bits (132), Expect = 1e-07
Identities = 94/364 (25%), Positives = 115/364 (31%), Gaps = 85/364 (23%)
Query: 166 HHSTGQPGAPVL--GGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNREAHLRR 223
HH P P + +G GN S G G P G+ G AP P
Sbjct: 39 HHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEP--------- 89
Query: 224 KPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNP 283
P PG GG + PP P R PL + A LRP P
Sbjct: 90 PPAGRARPG------GGGPQRPGPPSPRR-------PL------VPAGPAPPAAKLRPPP 130
Query: 284 D-----LVTVPLTAHPPVHP-PLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAG 337
+ VP A P P +GP AG P AL P G G G G G
Sbjct: 131 EGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAG--PAALAARAGPGPGPGPGPGPGP-GPG 187
Query: 338 EGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPH 397
+ +G G A L + A A S + P L P
Sbjct: 188 KP-------------------AGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPL 228
Query: 398 PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRP 457
P +P A ++ PP P+A PA PA PA + P
Sbjct: 229 P----KPAAPGTVIQTPPFVGAAAPPAPAAPS--PPAAPA------------PAAPAAAP 270
Query: 458 CPPTPAELNPATSSPRPLGP------LRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSAS 511
PP PA A P GP + P A Q+ G +P P PA P +
Sbjct: 271 PPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAG---AAPAPAPAAGGPAGVSG 327
Query: 512 RPGP 515
+PGP
Sbjct: 328 QPGP 331
Score = 43.9 bits (102), Expect = 4e-04
Identities = 109/465 (23%), Positives = 141/465 (30%), Gaps = 94/465 (20%)
Query: 68 VLAVLLQSLSPEGGLRAAEHRGTGAWSPHLPAAALELCRAMLLPGTWFSLNRVKESITAK 127
V++ L+ SL + AA H +P + AAA ++ G+ + A+
Sbjct: 21 VVSDLVGSLESQLAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAE 80
Query: 128 SR---------RGKVLLEGTGKEVPPRPLPAARAAARYPRPTAGWRRHHSTGQPG--APV 176
G+ G G + P P P P P A R G G APV
Sbjct: 81 GAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPV 140
Query: 177 LGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNREAHLRRKPRVGLEPGP--- 233
+ A G + G P+ L G P P P G PGP
Sbjct: 141 PAAAAVAA--GPEPAPAGPAKPAGPAALAARAGPGPGP---------GPGPGPGPGPGKP 189
Query: 234 -------------------HSSLP------GGKQETAPPPQPVRTTQTFFSPLFSSKLGI 268
H++ P G P P+P +P F
Sbjct: 190 AGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAP 249
Query: 269 HGDRAGSLTALRPNPDLVTVPLTAHPPVHP-PLRSGPPLGAGSRPRALCPAQTPSQASSS 327
A S A P P P A PP P P P G + P PA P A+ +
Sbjct: 250 PAPAAPSPPA-APAP---AAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQN 305
Query: 328 GGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGS-- 385
GG G + A + GG A + G G A AP +
Sbjct: 306 GGSAGAAPA-------------------PAPAAGGPAGVSGQPGPGAAAAAPAPGVKAES 346
Query: 386 ------FWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPS 439
P QTLA AS S+ + P Q L PS A PA P+
Sbjct: 347 PKRVVQAAPPAAQTLAASGPAS----TAASMVIGPTMQGAL----PSPAAVPPPAPGTPT 398
Query: 440 PREVTLGSHVPARVSRRPCPPTP---AELNPATSSPR-PLGPLRP 480
V +SR P T A L P +PR P P P
Sbjct: 399 GLPKGAAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQPPQNP 443
Score = 30.4 bits (67), Expect = 4.2
Identities = 56/227 (24%), Positives = 71/227 (31%), Gaps = 26/227 (11%)
Query: 302 SGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLR-RTLCSG 360
+GP A P A +A GGG G + L+ + R G
Sbjct: 73 AGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEG 132
Query: 361 GGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGL 420
+ + + AGP AG P LA RAG P G
Sbjct: 133 SAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAA--------RAGPGPGPGPGPGPGP 184
Query: 421 RDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGP--- 477
G P+ G A + L SH A + PA L P P+P P
Sbjct: 185 GPGKPAGPG----AAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPL---PKPAAPGTV 237
Query: 478 --LRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLEAT 522
P G + P +P P PA P P A+ P P P AT
Sbjct: 238 IQTPPFVGAAAPPAP----AAPSP-PAAPAPAAPAAAPPPPPPAPAT 279
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 54.7 bits (130), Expect = 2e-07
Identities = 112/404 (27%), Positives = 135/404 (33%), Gaps = 72/404 (17%)
Query: 148 PAARAAARY-PRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICG---PSPLQR 203
PAARA PRP R VLG +G G GI G P R
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR 76
Query: 204 LG-------GSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPP-------- 248
G S A RP R P PGP SS T P P
Sbjct: 77 AGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRI 136
Query: 249 ---QPVRTTQTFFSPLFSS-KLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGP 304
+ V + +P S+ G D +G T P+P + A V P P
Sbjct: 137 SAEETVARGKATEAPKRSALSAGARRDTSGP-TPGTPSPAMARRSRAAGTEVGLPR---P 192
Query: 305 PLGAGSRPRALCPAQTPSQASS------SGGGRGTSGAGEGHQHLLITYRVLSNLRRTLC 358
A RP P ++ S AS S R AG G Q R+L
Sbjct: 193 APSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQR---------PASRSLS 243
Query: 359 SGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQR 418
S S G R PRAP S P P+ L QA R P+ + PP
Sbjct: 244 SSATPLSSPARSGPSARGTPRAPAHPS--QPKPKGL----QALRPPQ------VTPPR-- 289
Query: 419 GLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPL 478
+D P+ S L PSP L S P + P P + L ++P PL P
Sbjct: 290 --KDAAPALGPLSSSPLATPSP-SAALQSQAPPTL---PATPHSSSLTCQLATPLPLAPP 343
Query: 479 RPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLEAT 522
P A P T P P PA P + + S SP L+AT
Sbjct: 344 SPSA-------PPSLQTLPSP-PATPPSQATTSL--GSPTLQAT 377
Score = 53.5 bits (127), Expect = 5e-07
Identities = 103/404 (25%), Positives = 130/404 (32%), Gaps = 88/404 (21%)
Query: 126 AKSRRGKVLLEGTGKEVP-PRPLPAARAA--ARYPRPTAGWRRHHSTGQPGAPVLGGSGT 182
A +RR + G EV PRP P+AR PR + HST +P +P +
Sbjct: 175 AMARRSRA----AGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEP-SPAARRRPS 229
Query: 183 AGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQ 242
AG G QR + R L S P R PR P P G Q
Sbjct: 230 AGGGLQRPASRS---------LSSSATPLSSPARSGPSARGTPRAPAHPSQPK--PKGLQ 278
Query: 243 ETAPPP--QPVRTTQTFFSPLFSSKLGIHG------DRAGSLTALRPNPDLVTVPLTAHP 294
PP P + PL SS L +A P+ +T L
Sbjct: 279 ALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPL 338
Query: 295 PVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLR 354
P+ PP S PP + PA PSQA++S G
Sbjct: 339 PLAPPSPSAPP---SLQTLPSPPATPPSQATTSLGS------------------------ 371
Query: 355 RTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQP 414
P SF P + P A+ P+A +L+L P
Sbjct: 372 -----------------------PTLQATHSFLPSPPLS----PLATPPPQAPPALAL-P 403
Query: 415 PHQRGLRDGCPSAAGRLSP-ALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPR 473
P Q P A+ LSP A P+P + A S P PP A +P S P
Sbjct: 404 PLQA---PPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPV 460
Query: 474 PLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP 517
P S P V P PA P SA+ P +P
Sbjct: 461 SPSATPPSQAPPSLAAPPLQV--PPSPPASPPMSPSATPPPQAP 502
Score = 45.8 bits (107), Expect = 1e-04
Identities = 68/257 (26%), Positives = 80/257 (31%), Gaps = 58/257 (22%)
Query: 281 PNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGH 340
P+ L PL PP PP+ + P L P A Q P + + G SG
Sbjct: 546 PSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGP---- 601
Query: 341 QHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQA 400
R TL L GP P P + +P
Sbjct: 602 -------------RLTL---------------ALAPGP----------PPPPSRSPSSTL 623
Query: 401 SRRPRAGCSLSL--QPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPC 458
S AG S S P RG G P SP P + L + PA SR P
Sbjct: 624 SGPDLAGHSSSATSTPEELRGYDSG-PEGGAAASP------PPDAELAACHPAAWSRGPA 676
Query: 459 PPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPH 518
PP P P P P G S+ + P A P P A PGPSP
Sbjct: 677 PPLAFRGAPGAPLPWP-----PATGPGSADGLCTIYETEGPESATPAP--GALDPGPSPG 729
Query: 519 LEATGTHAGSGTCQGSR 535
AG+G SR
Sbjct: 730 TSGGKAAAGAGAGASSR 746
Score = 32.3 bits (72), Expect = 1.1
Identities = 51/192 (26%), Positives = 68/192 (35%), Gaps = 25/192 (13%)
Query: 354 RRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQ 413
+R G A + GL PR P GS P P T P A R A ++ +
Sbjct: 4 KRDKAKAGAAARTPAARAPGLLT-PRPP--GSPRPPPPVT----PAALRVLGAAGAVGRK 56
Query: 414 PPHQRGLRDG---CPSAAGRLSPAL--------PAPSPREVTLGSHVPARVSRRPCPPTP 462
P +R G P +A R P PA P G P + P P +
Sbjct: 57 PLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSS 116
Query: 463 AELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPR--PIPARPRPRTSASRPG-PSPHL 519
T+ P PLG R + + + +P+ + A R TS PG PSP +
Sbjct: 117 PGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAM 176
Query: 520 ----EATGTHAG 527
A GT G
Sbjct: 177 ARRSRAAGTEVG 188
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 54.7 bits (130), Expect = 2e-07
Identities = 111/420 (26%), Positives = 140/420 (33%), Gaps = 81/420 (19%)
Query: 179 GSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAP-RPRNREAHLRRKPRVGLEPG---PH 234
G+ G +R + + P P L G +GE P + + GL PG P
Sbjct: 189 GAKRGGPPVKRAAEPPVVQPVPPAALSGPSGEEGLSPGGKRRRGCNSEQTGLPPGLPLPP 248
Query: 235 SSLPGGKQETAPPPQPVRTTQTFFSPLFS-SKLGI----HGD-----RAGSLTALR---- 280
LP PPP P+ T SP F +K G+ HGD R GS R
Sbjct: 249 PPLPPPPPPPPPPPPPLPGLAT--SPPFQLTKPGLWSTLHGDAWGPERKGSAPPERQEQR 306
Query: 281 ---PNPDLVTVPL-TAHPPVHPPLRSGPPLGAGSRP-----RALCPAQTPS----QASSS 327
P+P P TAHPP H + + PP G G RP PA P + S
Sbjct: 307 HSLPHPYPYPAPAYTAHPPGHRLVPAAPP-GPGPRPPGAESHGCLPATRPPGSDLRESRV 365
Query: 328 GGGRGTSGAGEGHQHLLITYRVL--SNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGS 385
R S + Y L T S +S + RG+ P P A
Sbjct: 366 QRSRMDSSVSPAATTACVPYAPSRPPGLPGTTTSSSSSSSSNTGL-RGVEPNPGIPGADH 424
Query: 386 FWDPNPQT-----LAPHPQASRRPRAGC-----SLSL--------QPPHQRGLRDGCPSA 427
+ P + L P +SR+P G LSL PP R LR P
Sbjct: 425 YQTPALEVSHHGRLGPSAHSSRKPFLGAPAATPHLSLPPGPSSPPPPPCPRLLRPP-PPP 483
Query: 428 AGRLSPALPAPSP-----REVTLGSHVPARVSRRPCPPTPAELNPATS-----------S 471
A PA A E+ G+ P R + P P L P S
Sbjct: 484 AWLKGPACRAAREDGEILEELFFGTEGPPRPAPPPLPHREGFLGPPASRFSVGTQDSHTP 543
Query: 472 PRPLGPLRPRAGGQSSGH---PDRTVTSPRP------IPARPRPRTSASRPGPSPHLEAT 522
P P P + S H P V+ P P I PRP + A P P + T
Sbjct: 544 PTPPTPTTSSSNSNSGSHSSSPAGPVSFPPPPYLARSIDPLPRPPSPAQNPQDPPLVPLT 603
Score = 36.6 bits (83), Expect = 0.059
Identities = 33/102 (32%), Positives = 40/102 (39%), Gaps = 26/102 (25%)
Query: 411 SLQPPHQRGLRD----GCPSAAGRLSPALPAPSPREVTL-GSHVPARVSRRPCPPTPAEL 465
++ PP R R+ G S AG S P P PR L G A + + PP PA L
Sbjct: 4 AVDPPGARAAREAFALGGLSCAGAWSSCPPHPPPRSAWLPGGRCSASIGQ---PPLPAPL 60
Query: 466 NPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPR 507
P+ G SSGHP + P P P PR
Sbjct: 61 PPSH--------------GSSSGHPSK----PYYAPGAPTPR 84
Score = 34.7 bits (78), Expect = 0.23
Identities = 64/256 (25%), Positives = 80/256 (31%), Gaps = 89/256 (34%)
Query: 16 GDKWTLKKKLDSLSPSHIVRDEMTSPDPDPASVNSSHLKAGLVPQSHTPGRLVLAVLLQS 75
GD W ++K + R + P P PA ++H P H RLV A
Sbjct: 287 GDAWGPERKGSAPPERQEQRHSLPHPYPYPAPAYTAH------PPGH---RLVPA----- 332
Query: 76 LSPEGGLRAAEHRGTGAWSPHLPAAALELCRAMLLPGTWFSLNRVKESITAKSRRGKVLL 135
+P G P P A C LP T + ++ES +SR +
Sbjct: 333 -APPGP------------GPRPPGAESHGC----LPATRPPGSDLRESRVQRSRMDSSVS 375
Query: 136 EGTGKEVPPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQR------ 189
PAA A P+ G PG S ++ N G R
Sbjct: 376 ------------PAATTACVPYAPS------RPPGLPGTTTSSSSSSSSNTGLRGVEPNP 417
Query: 190 --------------VSHRGICGPSPLQRLGGSTGEAPRPRNREAHLRRKPRVGLEPG-PH 234
VSH G GPS AH RKP +G PH
Sbjct: 418 GIPGADHYQTPALEVSHHGRLGPS-------------------AHSSRKPFLGAPAATPH 458
Query: 235 SSLPGGKQETAPPPQP 250
SLP G PPP P
Sbjct: 459 LSLPPGPSSPPPPPCP 474
Score = 31.6 bits (70), Expect = 1.9
Identities = 79/360 (21%), Positives = 113/360 (31%), Gaps = 88/360 (24%)
Query: 143 PPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQ 202
PP LP A++P P+ + P L S + GQ+ +RG
Sbjct: 771 PPPALPPPPPLAKFPPPSQP--QPPPPPPPSPASLLKSLASVLEGQKYCYRGT------- 821
Query: 203 RLGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPP-----PQPVRTTQTF 257
G + P P P PGP S +A P PQP ++ +
Sbjct: 822 --GAAVSTRPGPL---------PTTQYSPGPPSGATALPPTSAAPSAQGSPQPSASSSSQ 870
Query: 258 FS----PLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPV----------------- 296
FS P + G +T +P P L P + V
Sbjct: 871 FSTSGGPWARERRAGEEPVPGPMTPTQPPPPLSLPPARSESEVLEEISRACETLVERVGR 930
Query: 297 -----HPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLS 351
P+ + P +G+ R L PAQ +A GG SG+ + Q ++
Sbjct: 931 SATDPADPVDTAEPADSGTE-RLLPPAQAKEEA---GGVAAVSGSCKRRQK---EHQKEH 983
Query: 352 NLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLS 411
R C SVGR R G + A P+ R G +L
Sbjct: 984 RRHRRACKD--------SVGRRPREG------------RAKAKAKVPKEKSRRVLG-NLD 1022
Query: 412 LQPPHQRGLRDGCPSAAGRLS---------PALPAPSPREVTLGSHVPARVSRRPCPPTP 462
LQ +G P G P+ PAPS + + VP + +R P P
Sbjct: 1023 LQSEEIQGREKSRPDLGGASKAKPPTAPAPPSAPAPSAQPTPPSASVPGKKAREEAPGPP 1082
>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 54.3 bits (129), Expect = 3e-07
Identities = 59/213 (27%), Positives = 75/213 (35%), Gaps = 28/213 (13%)
Query: 139 GKEVPPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGP 198
G++VP P R P P R H G P + L G+G N G+ G
Sbjct: 483 GQQVPGFPTAPTRVVIARPTPPQA-RPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQ 541
Query: 199 ---SPLQRLGGSTGEAPRPRNREAHLRR-KPRVGLEPGPHSSLPGGKQETAPPPQPVRTT 254
P+ G+ G AP P A GP PGG + P PQP
Sbjct: 542 LLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGP---APGGPAQPPPTPQP-SMA 597
Query: 255 QTFFSPLFSSKLGIHGDRAG-------SLTALRPN--------PDLVTVPLTAHPPVHPP 299
FS L + LG G AG ++T P D + TA PP PP
Sbjct: 598 DLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPP 657
Query: 300 LRSGPPLGAGSRPRALCPAQTPSQASSSGGGRG 332
PP + + P +PS + S GG G
Sbjct: 658 ----PPPPPAPEQQTMPPPGSPSGGAGSPGGLG 686
>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 54.3 bits (129), Expect = 3e-07
Identities = 59/213 (27%), Positives = 75/213 (35%), Gaps = 28/213 (13%)
Query: 139 GKEVPPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGP 198
G++VP P R P P R H G P + L G+G N G+ G
Sbjct: 483 GQQVPGFPTAPTRVVIARPTPPQA-RPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQ 541
Query: 199 ---SPLQRLGGSTGEAPRPRNREAHLRR-KPRVGLEPGPHSSLPGGKQETAPPPQPVRTT 254
P+ G+ G AP P A GP PGG + P PQP
Sbjct: 542 LLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGP---APGGPAQPPPTPQP-SMA 597
Query: 255 QTFFSPLFSSKLGIHGDRAG-------SLTALRPN--------PDLVTVPLTAHPPVHPP 299
FS L + LG G AG ++T P D + TA PP PP
Sbjct: 598 DLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPP 657
Query: 300 LRSGPPLGAGSRPRALCPAQTPSQASSSGGGRG 332
PP + + P +PS + S GG G
Sbjct: 658 ----PPPPPAPEQQTMPPPGSPSGGAGSPGGLG 686
>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 54.3 bits (129), Expect = 3e-07
Identities = 59/213 (27%), Positives = 75/213 (35%), Gaps = 28/213 (13%)
Query: 139 GKEVPPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGP 198
G++VP P R P P R H G P + L G+G N G+ G
Sbjct: 483 GQQVPGFPTAPTRVVIARPTPPQA-RPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQ 541
Query: 199 ---SPLQRLGGSTGEAPRPRNREAHLRR-KPRVGLEPGPHSSLPGGKQETAPPPQPVRTT 254
P+ G+ G AP P A GP PGG + P PQP
Sbjct: 542 LLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGP---APGGPAQPPPTPQP-SMA 597
Query: 255 QTFFSPLFSSKLGIHGDRAG-------SLTALRPN--------PDLVTVPLTAHPPVHPP 299
FS L + LG G AG ++T P D + TA PP PP
Sbjct: 598 DLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPP 657
Query: 300 LRSGPPLGAGSRPRALCPAQTPSQASSSGGGRG 332
PP + + P +PS + S GG G
Sbjct: 658 ----PPPPPAPEQQTMPPPGSPSGGAGSPGGLG 686
>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
Length = 1132
Score = 54.3 bits (129), Expect = 3e-07
Identities = 59/213 (27%), Positives = 75/213 (35%), Gaps = 28/213 (13%)
Query: 139 GKEVPPRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGP 198
G++VP P R P P R H G P + L G+G N G+ G
Sbjct: 489 GQQVPGFPTAPTRVVIARPTPPQA-RPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQ 547
Query: 199 ---SPLQRLGGSTGEAPRPRNREAHLRR-KPRVGLEPGPHSSLPGGKQETAPPPQPVRTT 254
P+ G+ G AP P A GP PGG + P PQP
Sbjct: 548 LLMQPVLVAQGTPGMAPPPAPATASASAGTTNTATTAGP---APGGPAQPPPTPQP-SMA 603
Query: 255 QTFFSPLFSSKLGIHGDRAG-------SLTALRPN--------PDLVTVPLTAHPPVHPP 299
FS L + LG G AG ++T P D + TA PP PP
Sbjct: 604 DLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPP 663
Query: 300 LRSGPPLGAGSRPRALCPAQTPSQASSSGGGRG 332
PP + + P +PS + S GG G
Sbjct: 664 ----PPPPPAPEQQTMPPPGSPSGGAGSPGGLG 692
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 54.3 bits (129), Expect = 3e-07
Identities = 112/437 (25%), Positives = 153/437 (35%), Gaps = 79/437 (18%)
Query: 144 PRPLPAARAAARY-PRPTAGWRRHHSTGQPGAPVLGG--SGTAGNGGQRVSHRGICGPSP 200
P P P +AAA P PT R T PG G + TA G + P P
Sbjct: 842 PAPAPGTKAAAPSGPAPTTSIR---FTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPPP 898
Query: 201 LQRLGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSP 260
+ S +AP P L K V L P S+ GG A P P+ SP
Sbjct: 899 KAQ-SVSPVQAPPPGGSAQLLPGKVLVPLA-APSMSVRGGG---AGQPLPL------VSP 947
Query: 261 LFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRP-RALCPAQ 319
FS + + L P P V+ P PP+ P GP S+P + L P+
Sbjct: 948 PFSVPVQNGAQPPSKIIQLTPVP--VSTPSGLVPPLSPATLPGPT----SQPQKVLLPSS 1001
Query: 320 TPSQASSSGGGR----GTSGAGEGHQHLLITYRVLSNLRRTLCSGG--GVASMRISVGRG 373
T S GG GTS A + +Y S++ S G G A ++ + G
Sbjct: 1002 TRITYVQSAGGHALPLGTSPASS-QAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSAG 1060
Query: 374 LR----------------------AGPRAPDAGSFWD--PNPQTLAPHPQASRRPRA--- 406
A P P +F+ P P + AP Q S+ P +
Sbjct: 1061 QAPLLAPGQVGVSPVPSPQLPPACAAPGGPVITAFYSGSPAPTSSAPLAQPSQAPPSLVY 1120
Query: 407 GCSLSLQPPHQRGLRDGCPS-AAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAEL 465
+ S PP L G P+ A +P P PS ++ + A ++RP P P ++
Sbjct: 1121 TVATSTTPPAATILPKGPPAPATATPAPTSPFPSATAGSMTYSLVAPKAQRPSPKAPQKV 1180
Query: 466 N--------------------PATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPR 505
PA P GP+R +S T +P P+P
Sbjct: 1181 KAAIASIPVGSFEAGASGRPGPAPRQPLEPGPVREPTAPESELEGQPTPPAPPPLPETWT 1240
Query: 506 PRTSASRPGPSPHLEAT 522
P +S P P P E T
Sbjct: 1241 PTARSSPPLPPPAEERT 1257
Score = 39.7 bits (91), Expect = 0.007
Identities = 66/255 (25%), Positives = 89/255 (34%), Gaps = 55/255 (21%)
Query: 289 PLTAHPP--VHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGG-GRGTSGAGEGHQHLLI 345
PL PP PP+ G G+ A PA + + A++S G GT A E
Sbjct: 509 PLDPEPPGPPDPPVAFGKGYGSAPSSSASSPASSSASAATSFSLGSGTFKAQES------ 562
Query: 346 TYRVLSNLRRTLCSGGGVASMRISVGRGLRAG---PRAPDAGSFWDPNPQT--LAPHPQA 400
G+G AG P P AG P+ T L P
Sbjct: 563 -------------------------GQGSTAGPLRPPPPGAGGPATPSKATRFLPMDPAT 597
Query: 401 SRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPP 460
RR R L+PP + PS G + L P +E G ARV P
Sbjct: 598 FRRKRPESVGGLEPPGPSVIA-APPSGGGNILQTLVLPPNKEEQEGG--GARV-----PS 649
Query: 461 TPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLE 520
PA P+ + P PL A + ++P PI ++P P + + P+ +
Sbjct: 650 APA---PSLAYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASPN---D 703
Query: 521 ATGTHAGSGTCQGSR 535
G GT GSR
Sbjct: 704 TAGARTEMGT--GSR 716
Score = 30.4 bits (67), Expect = 4.2
Identities = 88/364 (24%), Positives = 115/364 (31%), Gaps = 83/364 (22%)
Query: 179 GSGT--AGNGGQRVSHRGICGPSPLQRLGGSTGEAPR--PRNREAHLRRKPRV--GLEPG 232
GSGT A GQ + + P P + +A R P + R++P GLEP
Sbjct: 553 GSGTFKAQESGQGSTAGPLRPPPPGAGGPATPSKATRFLPMDPATFRRKRPESVGGLEP- 611
Query: 233 PHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTA 292
PG APP QT P + G R S A
Sbjct: 612 -----PGPSVIAAPPSGGGNILQTLVLPPNKEEQEGGGARVPSAPA-------------- 652
Query: 293 HPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSN 352
P L G P SRP A SS+ + I +
Sbjct: 653 -----PSLAYGAPAAPLSRPAATMVTNVVRPVSSTP--------------VPIASKPFPT 693
Query: 353 LRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLA---PHPQASRRPRAGCS 409
R S A R +G G R +P S + ++ A P P P G +
Sbjct: 694 SGRAEASPNDTAGARTEMGTGSRVPGGSPLGVSLVYSDKKSAAATSPAPHLVAGPLLG-T 752
Query: 410 LSLQPPHQRGLRDGCPSAAGRLSPALP-----APSPREVTLGSHVPARVSRRPCPPTPAE 464
+ P L G P PA+ AP T GS A
Sbjct: 753 VGKAPATVTNLLVGTPGYGAPAPPAVQFIAQGAPGGG-TTAGSGAGA------------- 798
Query: 465 LNPATSSPRPLGPLRPRAGGQSSG----------HPDRTVTSPRPIPARPRPRTSASRP- 513
+ P PLG L+P A G++ G P + +P P PA P T A+ P
Sbjct: 799 -GSGPNGPVPLGILQPGALGKAGGITQVQYILPTLPQQLQVAPAPAPA---PGTKAAAPS 854
Query: 514 GPSP 517
GP+P
Sbjct: 855 GPAP 858
Score = 29.3 bits (64), Expect = 9.5
Identities = 26/100 (26%), Positives = 35/100 (35%), Gaps = 22/100 (22%)
Query: 435 LPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTV 494
+ A +P E G+ P P PP +P P G P + SG T
Sbjct: 1519 MQAATPTEQPPGAEAP-----LPVPPPTGTAAAPAPTPSPAGGPDPTSPSSDSG----TA 1569
Query: 495 TSPRPIPARPRPRTSASRPG-----------PSPHLEATG 523
+ P+P P P + +PG P P ATG
Sbjct: 1570 QAAPPLP--PPPESGPGQPGWEGAPQPSPPPPGPSTAATG 1607
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 53.5 bits (127), Expect = 5e-07
Identities = 115/440 (26%), Positives = 149/440 (33%), Gaps = 79/440 (17%)
Query: 126 AKSRRGKVLLEGTGKEVP-PRPLPAARAA--ARYPRPTAGWRRHHSTGQPGAPVLGGSGT 182
A +RR + G EV PRP P+AR PR + HST +P +P +
Sbjct: 166 AMARRSRA----AGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEP-SPAARRRPS 220
Query: 183 AGNGGQRVSHRGICGPS-PLQ---RLGGSTGEAPRPRNREAHLRRKPRVGLEP------- 231
AG G QR + R + + PL R G S PR + + K L P
Sbjct: 221 AGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPR 280
Query: 232 -------GPHSSLPGGKQETAPPPQPVR--TTQTFFSPLFS----SKLGIHGDRAGSLTA 278
GP SS P + PP P + QT SP + + + + +
Sbjct: 281 KDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHS 340
Query: 279 LRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRA---LCPAQTPSQASSSGGGRGTSG 335
P+P L PL PP PP + PPL A P A L P TPS + +
Sbjct: 341 FLPSPPLS--PLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALA----- 393
Query: 336 AGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGR--------GLRAGP-RAPDAGSF 386
HLL AS +S L A P + P +
Sbjct: 394 -----VHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPA 448
Query: 387 WDPNPQTLAPHPQASRRPRAGCSLSL-QPPHQRGLRDGCPSAAGRLSPALPAPSPREVTL 445
P + P PQA P A L L +PP Q P SP P +
Sbjct: 449 SPPMSPSATPPPQAP-PPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSP 507
Query: 446 GSHVPARVSRRPCPPTPAEL--------NPATSSPRPLGPLRPRAGGQSSGHPDRTVTSP 497
+ +P P P P L +SP P RP G PD +V+ P
Sbjct: 508 SASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPG-----PDTSVSGP 562
Query: 498 RPIPARPRPRTSASRPGPSP 517
R T A PGP P
Sbjct: 563 R--------LTLALAPGPPP 574
Score = 45.8 bits (107), Expect = 1e-04
Identities = 68/257 (26%), Positives = 80/257 (31%), Gaps = 58/257 (22%)
Query: 281 PNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGH 340
P+ L PL PP PP+ + P L P A Q P + + G SG
Sbjct: 507 PSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGP---- 562
Query: 341 QHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQA 400
R TL L GP P P + +P
Sbjct: 563 -------------RLTL---------------ALAPGP----------PPPPSRSPSSTL 584
Query: 401 SRRPRAGCSLSL--QPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPC 458
S AG S S P RG G P SP P + L + PA SR P
Sbjct: 585 SGPDLAGHSSSATSTPEELRGYDSG-PEGGAAASP------PPDAELAACHPAAWSRGPA 637
Query: 459 PPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPH 518
PP P P P P G S+ + P A P P A PGPSP
Sbjct: 638 PPLAFRGAPGAPLPWP-----PATGPGSADGLCTIYETEGPESATPAP--GALDPGPSPG 690
Query: 519 LEATGTHAGSGTCQGSR 535
AG+G SR
Sbjct: 691 TSGGKAAAGAGAGASSR 707
Score = 42.4 bits (98), Expect = 0.001
Identities = 74/289 (25%), Positives = 99/289 (34%), Gaps = 64/289 (22%)
Query: 231 PGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPL 290
PG + P G PP P + K +RAG + T+P
Sbjct: 22 PGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKP--LAERAGGIGG-------ATIPE 72
Query: 291 TAHPPVHPPLRSGPPLGAGSRPRALCPAQ--TPSQASSSGGGRGTSGAGE-GHQHLLITY 347
+A P P S PP A R PA+ +P SS G GT+ G G + L I+
Sbjct: 73 SA-PRAGPTRTSRPP--ASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRIS- 128
Query: 348 RVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAG 407
T+ G + + S L AG R +G P P T P P +RR RA
Sbjct: 129 -----AEETVARGKATEAPKRSA---LSAGARRDTSG----PTPGT--PSPAMARRSRAA 174
Query: 408 CSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNP 467
G G P A P P PR+ +
Sbjct: 175 -----------GTEVGLPRPAPSARPRPPTEGPRKSVSSAS-----------------EH 206
Query: 468 ATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPS 516
+T+ P P RP AGG R+++S P +S +R GPS
Sbjct: 207 STTEPSPAARRRPSAGGGLQRPASRSLSS------SATPLSSPARSGPS 249
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 52.4 bits (124), Expect = 1e-06
Identities = 48/159 (30%), Positives = 62/159 (38%), Gaps = 17/159 (10%)
Query: 370 VGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDG--CPSA 427
V +G GP+APD+ + P PQ A P P + SL PHQ L D PS
Sbjct: 739 VAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSL----PHQAPLGDSPHLPSP 794
Query: 428 AGRLSPALPAPSPREVTLGSHVPARVSRRPCPP--TPAELNPATSSPRPLGPLRPRAGGQ 485
P+ P P+ V S P+ PCPP P L LG P
Sbjct: 795 HPTRPPSRPPSRPQSV---SRPPSEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPP----- 846
Query: 486 SSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLEATGT 524
+ +P T P P RP+ + P+PHL + T
Sbjct: 847 -ASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSST 884
Score = 33.9 bits (76), Expect = 0.38
Identities = 118/490 (24%), Positives = 165/490 (33%), Gaps = 105/490 (21%)
Query: 46 ASVNSSHLKAGLVPQSHTPGRLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHLPAAALELC 105
AS S AGLV Q + +A L S GG AA TG S A A L
Sbjct: 276 ASAGVSPQGAGLVIQKNLSA--AVATTLNGNSVFGGAGAAS-APTGTPSGQPLAVAPGLG 332
Query: 106 RAMLLPGTWFSLNRVKESITAKSRRGKVLLEGTGKEVPPRPL-PAARAAARYPRPTAGWR 164
+ L+P L+R I K +L ++ P+P PA P A
Sbjct: 333 SSPLVPAPNVILHRTPTPIQPKPAG---VLPPKLYQLTPKPFAPAGATLTIQGEPGA--- 386
Query: 165 RHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPS---------PLQRLGGSTGEAPRPR 215
QP AP AG GQ V G P+ P G + + P
Sbjct: 387 ---LPQQPKAPQNLTFMAAGKAGQNVVLSGFPAPALQANVFKQPPATTTGAAPPQPPGAL 443
Query: 216 NR--EAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRA 273
++ HL + + P H LPG Q P V+ Q S+ G +
Sbjct: 444 SKPMSVHLLNQGSSIVIPAQHM-LPGQNQFLLPGAPAVQLPQQL-----SALPANVGGQI 497
Query: 274 GSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGT 333
+ A L+ P+ + + PL GP L S
Sbjct: 498 LAAAAPHTGGQLIANPILTNQNLAGPLSLGPVLAPHS----------------------- 534
Query: 334 SGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGR-GLRAGPRAPDAGSFWDPNPQ 392
G H+L ++ I VG+ L P + AGS P
Sbjct: 535 ---GAHSAHIL-------------------SAAPIQVGQPALFQMPVSLAAGSL--PTQS 570
Query: 393 TLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPAR 452
AP A+ G +L PP + + + G + PA PA + G P
Sbjct: 571 QPAPAGPAATTVLQGVTL---PPSAVAMLN---TPDGLVQPATPAAAT-----GEAAPV- 618
Query: 453 VSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASR 512
++ +P P P PA S+P PLG +P+A + +P P A P A+
Sbjct: 619 LTVQPAPQAP----PAVSTPLPLGLQQPQA--------QQPPQAPTPQAAAP---PQATT 663
Query: 513 PGPSPHLEAT 522
P PSP L ++
Sbjct: 664 PQPSPGLASS 673
Score = 33.5 bits (75), Expect = 0.50
Identities = 35/127 (27%), Positives = 47/127 (37%), Gaps = 17/127 (13%)
Query: 390 NPQTLAPHP-QASRRPRAGCSLSLQPPHQRGLRDGCPSA---AGRLSPALPAPSPREVTL 445
NP AP P Q RP++ PP SA + S LPAP+P + L
Sbjct: 849 NPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQL 908
Query: 446 GSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPR 505
+ P PP L P ++P P P + VT+ P PA P+
Sbjct: 909 QFPPSQGPHKSPTPPPTLHLVPEPAAPPPPPP-----------RTFQMVTT--PFPALPQ 955
Query: 506 PRTSASR 512
P+ R
Sbjct: 956 PKALLER 962
Score = 32.7 bits (73), Expect = 0.86
Identities = 58/235 (24%), Positives = 82/235 (34%), Gaps = 44/235 (18%)
Query: 295 PVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITY-RVLSNL 353
P H PL S P GA ++P P P++ GG G S + +T+ R S+L
Sbjct: 1222 PGHGPLSSSAP-GASTQP----PPHLPTKLVIRHGGAGGSPS--------VTWARASSSL 1268
Query: 354 RRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQ 413
+ S +S+ A + G P P P P + R+ L L+
Sbjct: 1269 SSSSSSSSAASSLD------------ADEDG----PMPSRNRP-PIKTYEARSRIGLKLK 1311
Query: 414 PPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPR 473
+ GL + A L P P P + P R P PP ++N P
Sbjct: 1312 IKQEAGLSKVVHNTA--LDPVHQPPPPPATLKVAEPPPRPP--PPPPPTGQMNGTVDHPP 1367
Query: 474 PLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLEATGTHAGS 528
P P R G ++ H R +P R R + PG A GS
Sbjct: 1368 PAAPERKPLG--TAPHCPR-------LPLRKTYRENVGGPGAPEGTPAGRARGGS 1413
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 51.2 bits (121), Expect = 2e-06
Identities = 84/301 (27%), Positives = 105/301 (34%), Gaps = 40/301 (13%)
Query: 232 GPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNP----DLVT 287
GP S GG+ + P P+ V PL S+ GD AG RP P +
Sbjct: 331 GPEHSKGGGRVDEGPQPRSVEPQDA--GPLERSQ----GDEAGGHGEDRPEPLSPKESKK 384
Query: 288 VPLTAHPPVHPPLRSGPPLGAGSRPRAL-CPAQTPSQASSSGGGRGTSGAGEGHQHLLIT 346
L PP GP + AL SQ S G + G G
Sbjct: 385 RKLELSRREQPPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGE------ 438
Query: 347 YRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLA--PHPQASRRP 404
+ R+ L G VA V + + A D+ + QTLA P S P
Sbjct: 439 --AVQPCRQPL--GARVAD---KVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAPSGHP 491
Query: 405 RAGCS---LSLQPPHQRGLRDGCPSAAGRL---SPALPA-PSPREVTLGSHVPARVSRRP 457
+AG S + + G ++G P + SPA PA P E S P P
Sbjct: 492 KAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESP--SETPGPRPAGP 549
Query: 458 CPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASR-PGPS 516
PAE T PRP GP AG + + P T P R P S S PGP
Sbjct: 550 AGDEPAESPSETPGPRPAGP----AGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPR 605
Query: 517 P 517
P
Sbjct: 606 P 606
Score = 41.2 bits (95), Expect = 0.002
Identities = 102/405 (25%), Positives = 131/405 (32%), Gaps = 82/405 (20%)
Query: 157 PRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRN 216
P P G R+ G PG P S T G CGP + GG E P+PR+
Sbjct: 301 PHPLEGSRKVEEEGSPGDPDHEAS-TQGR---------TCGPEH-SKGGGRVDEGPQPRS 349
Query: 217 REAHLRRKPRVGLEPGP----HSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDR 272
E + GP GG E P P SP S K + R
Sbjct: 350 VEPQ---------DAGPLERSQGDEAGGHGEDRPEP---------LSPKESKKRKLELSR 391
Query: 273 AGSLTALRPNP------DLVTVPLTAHPPVHPPLRSGPPLGAGSRP-RALCPAQTPSQAS 325
P P + + + L LR+G G P A+ P + P A
Sbjct: 392 REQ-PPTEPGPQSASEVEKIALNLEGCALSQGSLRTGTQEVGGQDPGEAVQPCRQPLGAR 450
Query: 326 SSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGG----------GVASMRISVGRGLR 375
+ R EG + V S +TL G G + + R
Sbjct: 451 VADKVRKRRKVDEGAGD---SAAVASGGAQTLALAGSPAPSGHPKAGHSENGVEEDTEGR 507
Query: 376 AGPRAPDAGSFWD-PNPQTLAP-------HPQASRRPR----AGCSLSLQPPHQRGLRDG 423
GP+ GS + P P P P + PR AG + P G R
Sbjct: 508 TGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPA 567
Query: 424 CPSAAGRL-SPA-LPAPSPREVTLG------SHVPARVSRRPCPPTPAELNPATSSPRPL 475
P+ SP+ P PSP T S P P PAE T PRP
Sbjct: 568 GPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPA 627
Query: 476 GPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLE 520
GP AG + + P T P P PA P R ++ G + L+
Sbjct: 628 GP----AGDEPAESPSET---PGPSPAGP-TRDEPAKAGEAAELQ 664
>gi|113429443 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 492
Score = 51.2 bits (121), Expect = 2e-06
Identities = 108/397 (27%), Positives = 138/397 (34%), Gaps = 95/397 (23%)
Query: 144 PRPLPAARAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRVSHRGI---CGPSP 200
PR L +R + Y P W + TG+P A + G +R SH + CG +
Sbjct: 98 PRRLDQSRCS-NYDTPA--WVQ---TGRPPARARDTAAPRDPGRER-SHTAVYAVCGVAA 150
Query: 201 LQRLGG-----STGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQ 255
L L G A PR R R + +PGP LP T PP
Sbjct: 151 LLVLAGIGARLGLERAHSPRARRTVTRALTELLKQPGPQEPLP----PTLGPP------- 199
Query: 256 TFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPP-LGAGSRPRA 314
++G R + P + A PP P +R PP L A + R
Sbjct: 200 --LGGCVQVQMGDGLPRGSPHNSAGPRTPRLA---RASPPGEPFMRVAPPGLAAAAAARD 254
Query: 315 LCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGL 374
P P G G GE R+ S R G S R + GRGL
Sbjct: 255 SEPGPVP----------GAGGCGED--------RLGSQPRP---ENGPPGSHRTASGRGL 293
Query: 375 RAGPR----------------APDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQR 418
R G APD + + AP P R + G SL+LQP + +
Sbjct: 294 RRGDSEGGVNRGIGPSRVSLLAPDKKRLNNAPRGSAAPGPPRGPRLQGGGSLTLQPDYAK 353
Query: 419 ---------GLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPAT 469
+ P + PAL PSPR+ PAR + RP P PA L+
Sbjct: 354 YATFKAAALKAAEAAPRDFCQRFPAL-EPSPRQ------PPAR-APRPSPDLPAPLDACP 405
Query: 470 SSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRP 506
+P P P A G P TS R PARP P
Sbjct: 406 WAPPVYAP--PAAPG-----PYAAWTSSR--PARPAP 433
>gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]
Length = 449
Score = 48.5 bits (114), Expect = 2e-05
Identities = 79/295 (26%), Positives = 101/295 (34%), Gaps = 56/295 (18%)
Query: 264 SKLGIHGDRAGSLTALRPNPD---LVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQT 320
S LG+ GD +L L P P ++V L P P S AG P + PA+
Sbjct: 83 SGLGVPGDSESALGLLEPGPPKSLRISVTLGQAPRAGPSAASS--AAAGKTPPSRVPAEP 140
Query: 321 PSQASSS-------------GGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVA--- 364
S+ +S GRG +GA G L T R R G A
Sbjct: 141 SSRRGASKRRESWRTDGERLRSGRGCAGAARGPDASLDTRR--EGWPRAAVVGRHEARRL 198
Query: 365 SMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDG- 423
+SV L GP + S + ++ A H ++S R C Q P QR L G
Sbjct: 199 KPGVSVSSSLSPGPPLQRSSSL-NETLRSAAAHAESSARE---CGKRTQRPEQRFLCRGS 254
Query: 424 --CPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPR 481
C RL P P P RRP P PA A + R G P
Sbjct: 255 SFCGHRPQRLHPGRPLPP--------------QRRPPGPAPA----AAGATR--GTAAPP 294
Query: 482 AGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLEATGTHAGSGTCQGSRG 536
S+ D P P+ AR + P + L G AG G + G
Sbjct: 295 GRDPSAWFLDSASACPTPLAAR------SWHPFVANKLCGRGKGAGGGASRPKEG 343
Score = 31.6 bits (70), Expect = 1.9
Identities = 35/143 (24%), Positives = 46/143 (32%), Gaps = 26/143 (18%)
Query: 399 QASRRPRAGCSLSLQPPHQRG-----LRDGCPSAAGRLSPALPAPSPREVTLGSHVPARV 453
+A RRP G H RG RD + L P E LG P
Sbjct: 51 RAERRPARG-------KHVRGGGVGGCRDSRAGGSHAAPSGLGVPGDSESALGLLEPG-- 101
Query: 454 SRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRP 513
PP ++ PRAG ++ T P +PA P R AS+
Sbjct: 102 -----PPKSLRISVTLGQA-------PRAGPSAASSAAAGKTPPSRVPAEPSSRRGASKR 149
Query: 514 GPSPHLEATGTHAGSGTCQGSRG 536
S + +G G +RG
Sbjct: 150 RESWRTDGERLRSGRGCAGAARG 172
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 48.5 bits (114), Expect = 2e-05
Identities = 48/155 (30%), Positives = 55/155 (35%), Gaps = 13/155 (8%)
Query: 361 GGVASMRISVGRGLRAGPRAPD----AGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPH 416
GG A R+ VG G G P P A HP A R A LS
Sbjct: 16 GGGAGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALAAA 75
Query: 417 QRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLG 476
Q R P G A P P + VPA S P P P+ P S P G
Sbjct: 76 QPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPGPLPARPSSPPPRPSLPS--G 133
Query: 477 PLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSAS 511
P RP P + +PRP ARP P+ S +
Sbjct: 134 PHRPVL-------PPSALAAPRPPLARPLPQGSVT 161
>gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo
sapiens]
Length = 449
Score = 48.5 bits (114), Expect = 2e-05
Identities = 79/295 (26%), Positives = 101/295 (34%), Gaps = 56/295 (18%)
Query: 264 SKLGIHGDRAGSLTALRPNPD---LVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCPAQT 320
S LG+ GD +L L P P ++V L P P S AG P + PA+
Sbjct: 83 SGLGVPGDSESALGLLEPGPPKSLRISVTLGQAPRAGPSAASS--AAAGKTPPSRVPAEP 140
Query: 321 PSQASSS-------------GGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVA--- 364
S+ +S GRG +GA G L T R R G A
Sbjct: 141 SSRRGASKRRESWRTDGERLRSGRGCAGAARGPDASLDTRR--EGWPRAAVVGRHEARRL 198
Query: 365 SMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDG- 423
+SV L GP + S + ++ A H ++S R C Q P QR L G
Sbjct: 199 KPGVSVSSSLSPGPPLQRSSSL-NETLRSAAAHAESSARE---CGKRTQRPEQRFLCRGS 254
Query: 424 --CPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPR 481
C RL P P P RRP P PA A + R G P
Sbjct: 255 SFCGHRPQRLHPGRPLPP--------------QRRPPGPAPA----AAGATR--GTAAPP 294
Query: 482 AGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLEATGTHAGSGTCQGSRG 536
S+ D P P+ AR + P + L G AG G + G
Sbjct: 295 GRDPSAWFLDSASACPTPLAAR------SWHPFVANKLCGRGKGAGGGASRPKEG 343
Score = 31.6 bits (70), Expect = 1.9
Identities = 35/143 (24%), Positives = 46/143 (32%), Gaps = 26/143 (18%)
Query: 399 QASRRPRAGCSLSLQPPHQRG-----LRDGCPSAAGRLSPALPAPSPREVTLGSHVPARV 453
+A RRP G H RG RD + L P E LG P
Sbjct: 51 RAERRPARG-------KHVRGGGVGGCRDSRAGGSHAAPSGLGVPGDSESALGLLEPG-- 101
Query: 454 SRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRP 513
PP ++ PRAG ++ T P +PA P R AS+
Sbjct: 102 -----PPKSLRISVTLGQA-------PRAGPSAASSAAAGKTPPSRVPAEPSSRRGASKR 149
Query: 514 GPSPHLEATGTHAGSGTCQGSRG 536
S + +G G +RG
Sbjct: 150 RESWRTDGERLRSGRGCAGAARG 172
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 48.5 bits (114), Expect = 2e-05
Identities = 48/155 (30%), Positives = 55/155 (35%), Gaps = 13/155 (8%)
Query: 361 GGVASMRISVGRGLRAGPRAPD----AGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPH 416
GG A R+ VG G G P P A HP A R A LS
Sbjct: 16 GGGAGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALAAA 75
Query: 417 QRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLG 476
Q R P G A P P + VPA S P P P+ P S P G
Sbjct: 76 QPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPGPLPARPSSPPPRPSLPS--G 133
Query: 477 PLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSAS 511
P RP P + +PRP ARP P+ S +
Sbjct: 134 PHRPVL-------PPSALAAPRPPLARPLPQGSVT 161
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 48.5 bits (114), Expect = 2e-05
Identities = 44/148 (29%), Positives = 62/148 (41%), Gaps = 28/148 (18%)
Query: 391 PQTLAPHPQASRRPR--AGCSLSLQPPHQRGLRDGCPSAA---GRLSPALPAPSPREVTL 445
P+T AP +RR + A ++ PP G R P+ G SP P PR + +
Sbjct: 552 PETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQALPRRL-V 610
Query: 446 GSHV---------------PARVSRRPCPPTPAELNPATSSPRPLGPLRPR-----AGGQ 485
GS + PAR R P +P+ +P +SP P+ P A
Sbjct: 611 GSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNPAQVDLGAATA 670
Query: 486 SSGHPDRT--VTSPRPIPARPRPRTSAS 511
G P+ V +P IP +PRPR+ AS
Sbjct: 671 EGGAPEAISGVPTPPAIPPQPRPRSLAS 698
Score = 33.5 bits (75), Expect = 0.50
Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 16/95 (16%)
Query: 425 PSAAGRLSPALPAPSPREV-TLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAG 483
P+ A +PA PAP+P L S + PP PA S P P+
Sbjct: 505 PTPATTPAPA-PAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVE---- 559
Query: 484 GQSSGHPDRTVTSPRPIPARPR---PRTSASRPGP 515
D + RP PARP P+ S SR P
Sbjct: 560 -------DMARRTKRPAPARPTMPPPQVSGSRSSP 587
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 48.5 bits (114), Expect = 2e-05
Identities = 104/405 (25%), Positives = 139/405 (34%), Gaps = 76/405 (18%)
Query: 156 YPRPTAGWRRHHSTGQPGA-PVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRP 214
YP P A HS G P A P L S + G+ H G GPS L G GEA P
Sbjct: 514 YPGPAA-----HSQGLPTASPSL--SYSTGHSPALSGHGGGWGPSSL----GGGGEAS-P 561
Query: 215 RNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAG 274
+ L+ P G PG S GK ++ V + F +P G + AG
Sbjct: 562 SHIIRPLQSPPATGRPPGVGSPGAPGKYLSS-----VLASAPFLAP---PGAGSYAAGAG 613
Query: 275 SLTALRPNPDLVTVPLTAHPPV-----------HPPLRSGPPLGAGSRPRALCPAQTPSQ 323
+L+ P PP H PP +G+ L +
Sbjct: 614 GYKGKGDGSELLAGP--GGPPAERTEDEEFLIQHLLQAPSPPRTSGAD--GLVGEDGAAD 669
Query: 324 ASSSGGGRGTSGAGEGHQHLLIT-----YRVLSNLRRTLC-SGGGVASMRISVGRGLRAG 377
AS GG G +G G + L Y + S +R + G A++ + +GR L+
Sbjct: 670 ASKGLGGSGGAGGPPGTPYELAKEDPQRYHLQSVIRTSASLDEGATAALELGLGR-LKEK 728
Query: 378 PRAPDAGS-----------FWDPNPQTLAPHPQASRRPRAGCSLSLQP-PHQRGLRDGCP 425
+ P+ G + + L Q S P + S QP PH L G P
Sbjct: 729 KKGPERGGETPEGLATSVVHYGAGAKELGAFLQKSPPPPPPTAQSTQPTPHGLLLEAGGP 788
Query: 426 SAAGRLSPA-----------LPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRP 474
L P P+PSP +G H+ +R P P P P P
Sbjct: 789 DLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVHLLEPATRDGAPQPP----PPPPPPPP 844
Query: 475 LGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHL 519
PL+ A +S G P R RP S PG L
Sbjct: 845 PMPLQLEAHLRSHG------LEPAAPSPRLRPEESLDPPGAMQEL 883
Score = 38.5 bits (88), Expect = 0.016
Identities = 108/443 (24%), Positives = 146/443 (32%), Gaps = 85/443 (19%)
Query: 149 AARAAARYPRP-TAGWRRHHSTGQPGAPVLGG--SGTAGNGGQRVSH---RGICGPSPL- 201
AA A R P P + + S G P A G SG G GGQ S +G+ GP
Sbjct: 399 AAGGATRPPPPRSTATPKCQSLGGPAAAYATGKASGAGGAGGQAYSPGQPQGLLGPQAYG 458
Query: 202 QRLGGS-----------TGEAPRP------------RNREAHLRRKPRVGLEPGPHSSLP 238
Q GG +G P+P ++ + G++ P+ P
Sbjct: 459 QGFGGGQAQDLSKAPSYSGGPPQPPSGPPPPGLATCQSYSPDQLQGQLYGVQGEPYPG-P 517
Query: 239 GGKQETAPPPQPVRTTQTFFSPLFS--------SKLGIHGDRAGSLTALRPNPDLVTVPL 290
+ P P + T SP S S LG G+ + S +RP L + P
Sbjct: 518 AAHSQGLPTASPSLSYSTGHSPALSGHGGGWGPSSLGGGGEASPS-HIIRP---LQSPPA 573
Query: 291 TAHPP-VHPPLRSGPPLGA--GSRPRALCPAQTPSQASSSGGGRGTSG-----AGEGH-- 340
T PP V P G L + S P L P S A+ +GG +G AG G
Sbjct: 574 TGRPPGVGSPGAPGKYLSSVLASAP-FLAPPGAGSYAAGAGGYKGKGDGSELLAGPGGPP 632
Query: 341 -----------QHLLITYRVLSNLRRTLCSG--GGVASMRISVGRGLRAGPRAPDAGSFW 387
QHLL + S R + G G + S G G G P +
Sbjct: 633 AERTEDEEFLIQHLL---QAPSPPRTSGADGLVGEDGAADASKGLGGSGGAGGPPGTPYE 689
Query: 388 DPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGL-----RDGCPSAAGRLSPALPAPSPRE 442
H Q+ R A + GL + P G L
Sbjct: 690 LAKEDPQRYHLQSVIRTSASLDEGATAALELGLGRLKEKKKGPERGGETPEGLATSVVHY 749
Query: 443 VTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPA 502
+ A + + P PP P ++ P P G L +G PD + P P P
Sbjct: 750 GAGAKELGAFLQKSPPPPPPTA---QSTQPTPHGLLL------EAGGPDLPLVLPPP-PP 799
Query: 503 RPRPRTSASRPGPSPHLEATGTH 525
+ P + P PSP G H
Sbjct: 800 QLLPSVLSHAPSPSPSASKVGVH 822
Score = 38.5 bits (88), Expect = 0.016
Identities = 41/163 (25%), Positives = 54/163 (33%), Gaps = 25/163 (15%)
Query: 378 PRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSP---- 433
P P G P PHP S G +L+ GL GCPS RL
Sbjct: 1315 PSVPARGLQPQPPATPAVPHPPPSGA--FGLGGALEAAESEGLGLGCPSPCKRLDEELKR 1372
Query: 434 ---ALPAPSPREVT-------LGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAG 483
LP+ S E L + + +S PP + +T PL P G
Sbjct: 1373 NLETLPSFSSDEEDSVAKNRDLQESISSAISALDDPPLAGPKDTSTPDGPPLAPAAAVPG 1432
Query: 484 ---------GQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSP 517
S+G P+ + +P P P T +P P P
Sbjct: 1433 PPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPP 1475
Score = 33.9 bits (76), Expect = 0.38
Identities = 28/115 (24%), Positives = 40/115 (34%), Gaps = 8/115 (6%)
Query: 411 SLQPPHQRGLRDGCPSAAGRLSPALPAPSPREV-------TLGSHVPARVSRRPCPPTPA 463
+L P G +D L+PA P P + + G+ P + +P P P
Sbjct: 1404 ALDDPPLAGPKDTSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPP 1463
Query: 464 ELNPATSSPRPLGPLRPRAGGQSS-GHPDRTVTSPRPIPARPRPRTSASRPGPSP 517
P P P P +P P + P P+P P P + P P P
Sbjct: 1464 APTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPP 1518
Score = 33.5 bits (75), Expect = 0.50
Identities = 78/316 (24%), Positives = 108/316 (34%), Gaps = 55/316 (17%)
Query: 232 GPHSSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLT 291
GP + P PPP P R T F+ L SS A + A + +P L
Sbjct: 220 GPAQTPPYRPGPPDPPPPP-RHLPTQFNLLASSS-------AAAAAAEQSSPQLYNFSGA 271
Query: 292 AHPPVHPPLRSGPP----LGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLI-- 345
A P PP R+ P + RP + P P A + QH L
Sbjct: 272 APGPP-PPERALPRQDTVIKHYQRPASAQPPPPPPPAHAL-------------QHYLSCG 317
Query: 346 -TYRVLSNLRRTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRP 404
+Y + + CS G G +AGP AG+ A P+A+
Sbjct: 318 GSYPSMGHRANLACSPLGGGEPSPGAGEPSKAGPSGATAGA------SGRATGPEAAGGG 371
Query: 405 RAGCSLS-----LQPPHQRGLRDGCPSAAG---RLSPALPAPSPREVTLGSHVPARVSRR 456
AG +Q P + + G +AAG R P +P+ +LG A + +
Sbjct: 372 GAGGGGGGYRPIIQSPGYKTGKGGYGAAAGGATRPPPPRSTATPKCQSLGGPAAAYATGK 431
Query: 457 PCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPS 516
A A S +P G L P+A GQ G S P + P+ + P P
Sbjct: 432 ASGAGGAG-GQAYSPGQPQGLLGPQAYGQGFGGGQAQDLSKAPSYSGGPPQPPSGPPPP- 489
Query: 517 PHLEATGTHAGSGTCQ 532
G TCQ
Sbjct: 490 ----------GLATCQ 495
Score = 29.3 bits (64), Expect = 9.5
Identities = 58/243 (23%), Positives = 77/243 (31%), Gaps = 27/243 (11%)
Query: 282 NPDLVTVPLTAHPPVHPPLRSGPPLGA-GSRPRA----LCPAQTPSQASSSGGG-RGTSG 335
+P L LT PP+ PP P + A G +P+ P PS A GG
Sbjct: 1295 HPPLYQAGLT--PPLSPPKSVPPSVPARGLQPQPPATPAVPHPPPSGAFGLGGALEAAES 1352
Query: 336 AGEGHQHLLITYRVLSNLRRTLCSGGGVAS-----------MRISVGRGLRAGPRAPDAG 384
G G R+ L+R L + +S ++ S+ + A P AG
Sbjct: 1353 EGLGLGCPSPCKRLDEELKRNLETLPSFSSDEEDSVAKNRDLQESISSAISALDDPPLAG 1412
Query: 385 --SFWDPNPQTLAPH------PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALP 436
P+ LAP P P A + + +PP P A P P
Sbjct: 1413 PKDTSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPP 1472
Query: 437 APSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTS 496
P P P V+ P P P L P P P P P +
Sbjct: 1473 PPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAA 1532
Query: 497 PRP 499
P P
Sbjct: 1533 PSP 1535
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 48.1 bits (113), Expect = 2e-05
Identities = 119/543 (21%), Positives = 190/543 (34%), Gaps = 71/543 (13%)
Query: 6 LGEEQLPLVPGDKWTLKKKLDSLSPSHIVRDEMTSPDPD--PASVNSSHLKAGLVPQSHT 63
L + P +P T DS +P+ + SP P++VN + + P +
Sbjct: 2242 LASARTPAIP----TAVNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPRTPTAPAVNL 2297
Query: 64 PG-RLVLAVLLQSLSPEGGLRAAEHRGTGAWSPHLPAAA-------LELCRAMLLPGTWF 115
G R A+ SL+ G A + + + +P PA+A + + G+
Sbjct: 2298 AGARTPAALAALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVNIAGSRT 2357
Query: 116 SLNRVKESITAKSRRGKVLLEGTGKEVPPRPLPA-ARAAARYPRPTAGWRRHHSTGQPGA 174
+ S+T S R L G P PL A R + R P R S P A
Sbjct: 2358 AAALAPASLT--SARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLD--RARSRTPPSA 2413
Query: 175 PVLGGSGTAGNGGQRVSHRGICGPSPLQRLGGSTGEAPRPRNREAHLRRKPRVGLEPGPH 234
P + + S R PSP R+G + ++ P ++ +PR P P
Sbjct: 2414 P---------SQSRMTSERA---PSPSSRMGQAPSQSLLPPAQD-----QPR---SPVP- 2452
Query: 235 SSLPGGKQETAPPPQPVRTTQTFFSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHP 294
S+ + PV +Q+ S ++ GD G L+ V P H
Sbjct: 2453 SAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLS--------VPAPGVPHS 2504
Query: 295 PVHPPLRSGPPLGAGSRPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLR 354
V P P +P AL Q + SS +S + S+
Sbjct: 2505 DVGEP----PASTGAQQPSALAALQPAKERRSSSSSSSSSSSSS------------SSSS 2548
Query: 355 RTLCSGGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQP 414
+ S +S S G L P P+ P+P T AP +A R R +
Sbjct: 2549 SSSSSSSSGSSSSDSEGSSL---PVQPEVALKRVPSP-TPAPK-EAVREGRPPEPTPAKR 2603
Query: 415 PHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRP 474
+ S++ S + + S + S + S P+PA+ P + P+P
Sbjct: 2604 KRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQ-ALPKP 2662
Query: 475 LGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPH-LEATGTHAGSGTCQG 533
P +P G + S P + + S R + RP P P + + + G+ +G
Sbjct: 2663 ASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRG 2722
Query: 534 SRG 536
RG
Sbjct: 2723 QRG 2725
Score = 38.9 bits (89), Expect = 0.012
Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 20/149 (13%)
Query: 378 PRAPDAGSFWDPNPQTLAPHPQASRRPRAGCS--LSLQP---PHQRGLRDGCPSAAGRLS 432
P+ +GS + +T+A P +R R+G S L ++P P +R D P + +
Sbjct: 1512 PQRERSGSESSVDQKTVARTP-LGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTR 1570
Query: 433 PALP----APSPREVTLGSHVPARVSRRPCPPTPAELNPATSSPRPLGPLRPRAGGQSSG 488
L + S EV S + R SR P + PR PRA S
Sbjct: 1571 TPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKD------KPRAA----PRAQSGSDS 1620
Query: 489 HPDRTVTSPRPIPARPRPRTSASRPGPSP 517
P+ +PR +P R R +S+ GPSP
Sbjct: 1621 SPEPKAPAPRALPRRSRSGSSSKGRGPSP 1649
Score = 37.0 bits (84), Expect = 0.045
Identities = 85/350 (24%), Positives = 133/350 (38%), Gaps = 56/350 (16%)
Query: 198 PSPLQRLGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQ-ETAPPPQPVRTT-- 254
PS R G S G H G++ P + G + +++P P+ + T
Sbjct: 1435 PSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQTPR 1494
Query: 255 ---QTFFSPLFSSK-LGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGS 310
++ SP ++K L +R+GS +++ D TV A P+ RSG S
Sbjct: 1495 PRSRSPSSPELNNKCLTPQRERSGSESSV----DQKTV---ARTPLGQRSRSG-----SS 1542
Query: 311 RPRALCPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISV 370
+ + P+ +P + S S +S + + R S + S ++ R
Sbjct: 1543 QELDVKPSASPQERSESD----SSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRS 1598
Query: 371 GRG--LRAGPRA-PDAGSFWDPNPQTLAPHPQA-SRRPRAGCSLSLQ------------- 413
G ++ PRA P A S D +P+ AP P+A RR R+G S +
Sbjct: 1599 GSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESS 1658
Query: 414 ---PPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVP--ARVSRRP-----CPPTPA 463
PP R R G S+ + + P R + AR+SRR P T +
Sbjct: 1659 PEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRS 1718
Query: 464 EL------NPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPRPIPARPRPR 507
+P+ SSP P R +S+ P TS R P+PR
Sbjct: 1719 RTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPR 1768
Score = 33.5 bits (75), Expect = 0.50
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 26/163 (15%)
Query: 380 APDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQP--PHQRGLRDGCPSAAGRLSPAL-- 435
+P +G + + P +++RP + + + QP P++ +D +A R SP+
Sbjct: 297 SPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPER 356
Query: 436 -------PAPSP--REVTLGSHVP---ARVSRRPCPPTPAELNPATSSPRPLGPLR-PRA 482
PAP+P E GS P +S+ P P P+E +P P P + P++
Sbjct: 357 SSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNP-PSEASPTRDRSPPKSPEKLPQS 415
Query: 483 GGQSSGHPDRTVTSPRPIPARPRPRTSASRPGPSPHLEATGTH 525
S P SP+P +S P P+P A G+H
Sbjct: 416 SSSESSPP-----SPQPTKVSRHASSSPESPKPAP---APGSH 450
Score = 32.7 bits (73), Expect = 0.86
Identities = 90/355 (25%), Positives = 109/355 (30%), Gaps = 59/355 (16%)
Query: 198 PSPLQRLGGSTGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTF 257
PSP + G AP P E H G P P ++ P QE PP T+
Sbjct: 352 PSPERSSTGPEPPAPTPLLAERH-------GGSPQPLATTPLS-QEPVNPPSEASPTRDR 403
Query: 258 FSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAH-----------PPVHPPLRSGPPL 306
P KL ++ S + P+P V A P H + S P
Sbjct: 404 SPPKSPEKL----PQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTS 459
Query: 307 GAGSRPRAL---CPAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLR----RTLCS 359
S RA + TPS+ T+ G T R S R R S
Sbjct: 460 KNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTP-TKRGHSRSRSPQWRRSRS 518
Query: 360 GGGVASMRISVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRG 419
R RG P+ P W + T SR R G S S P +
Sbjct: 519 AQRWGRSRSPQRRGRSRSPQRPG----WSRSRNT--QRRGRSRSARRGRSHSRSPATRGR 572
Query: 420 LRDGCPSAAGRLSPALPAP------SPREVTLGSHVPARVSRRPCPPTPAELNPATSSP- 472
R P+ GR PA +P S PAR R TPA T SP
Sbjct: 573 SRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSR-TPARRRSRTRSPV 631
Query: 473 ----RPLGPLR----------PRAGGQSSGHPDRTVTSPRPIPARPRPRTSASRP 513
R P R R G S P R S PAR R+ + P
Sbjct: 632 RRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTP 686
Score = 29.3 bits (64), Expect = 9.5
Identities = 35/130 (26%), Positives = 46/130 (35%), Gaps = 15/130 (11%)
Query: 398 PQASRRPRAGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRP 457
P RR R+ S P +R R P A R S + PR+ + S P + RR
Sbjct: 2000 PVTRRRSRSRTS----PVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSR-SRSPLAIRRRS 2054
Query: 458 CPPTPAELNPATSSPRPLGPLRPRAGGQSSGHPDRTVTSPR----------PIPARPRPR 507
TP S R +R R+ SS R+ T P P+
Sbjct: 2055 RSRTPRTARGKRSLTRSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRM 2114
Query: 508 TSASRPGPSP 517
+ SRP SP
Sbjct: 2115 SCFSRPSMSP 2124
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 47.8 bits (112), Expect = 3e-05
Identities = 71/256 (27%), Positives = 88/256 (34%), Gaps = 47/256 (18%)
Query: 151 RAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRV--SHRGICGPSPLQRL---- 204
R + R P+P A + G GG G AG GG V + G C Q
Sbjct: 21 RGSQRVPQPPA------ARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFG 74
Query: 205 ---GG----STGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTF 257
GG S+G P A R R S G + A P P R + F
Sbjct: 75 RGEGGDLQVSSGPGAAP---PAEFRASAR---------SAQGSRDVPAGPGFPPRLPRPF 122
Query: 258 FSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCP 317
S FS++ + A +L A R P A P P GP GA R R
Sbjct: 123 TSASFSNQTRLRRRSASALPAPR------LCPQRASPGCSSPGVRGPGGGASPRARGGNA 176
Query: 318 AQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAG 377
A + ++GGGR S G L + L R G MR +G G R
Sbjct: 177 AAALAARQAAGGGRSRSAFVAGRDAAL----ACAQLPRRPRGAGARRGMRRRLGAGERPA 232
Query: 378 ------PRAPDAGSFW 387
PRAP G+ W
Sbjct: 233 PRPRGPPRAPARGARW 248
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 47.8 bits (112), Expect = 3e-05
Identities = 71/256 (27%), Positives = 88/256 (34%), Gaps = 47/256 (18%)
Query: 151 RAAARYPRPTAGWRRHHSTGQPGAPVLGGSGTAGNGGQRV--SHRGICGPSPLQRL---- 204
R + R P+P A + G GG G AG GG V + G C Q
Sbjct: 21 RGSQRVPQPPA------ARSPRGPRAGGGGGDAGGGGAPVRRARGGGCWARAYQDARCFG 74
Query: 205 ---GG----STGEAPRPRNREAHLRRKPRVGLEPGPHSSLPGGKQETAPPPQPVRTTQTF 257
GG S+G P A R R S G + A P P R + F
Sbjct: 75 RGEGGDLQVSSGPGAAP---PAEFRASAR---------SAQGSRDVPAGPGFPPRLPRPF 122
Query: 258 FSPLFSSKLGIHGDRAGSLTALRPNPDLVTVPLTAHPPVHPPLRSGPPLGAGSRPRALCP 317
S FS++ + A +L A R P A P P GP GA R R
Sbjct: 123 TSASFSNQTRLRRRSASALPAPR------LCPQRASPGCSSPGVRGPGGGASPRARGGNA 176
Query: 318 AQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRISVGRGLRAG 377
A + ++GGGR S G L + L R G MR +G G R
Sbjct: 177 AAALAARQAAGGGRSRSAFVAGRDAAL----ACAQLPRRPRGAGARRGMRRRLGAGERPA 232
Query: 378 ------PRAPDAGSFW 387
PRAP G+ W
Sbjct: 233 PRPRGPPRAPARGARW 248
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 47.8 bits (112), Expect = 3e-05
Identities = 75/322 (23%), Positives = 108/322 (33%), Gaps = 68/322 (21%)
Query: 214 PRNREAHLRRKPRVGLEPGPHSSL--PGGKQETAPPPQPVRTTQTF--------FSPLFS 263
PR EA P V G H+ + P + APP P Q + P
Sbjct: 176 PRQPEASFEPHPSV-TPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMG 234
Query: 264 SKLGIHGDRAGSLTALRPNPDLVTVPLTAH-------PPVHPPLRSGPPLGAGSRPRALC 316
K G G + +P T P++ PP PP P+G G+ P A
Sbjct: 235 PKGGGAASSVGGPNGGKQHPP-PTTPISVSSSGASGAPPTKPPTT---PVGGGNLPSAPP 290
Query: 317 PAQTPSQASSSGGGRGTSGAGEGHQHLLITYRVLSNLRRTLCSGGGVASMRI-------- 368
PA P + L L L S G+ + +
Sbjct: 291 PANFPHVTPN-----------------LPPPPALRPLNNASASPPGLGAQPLPGHLPSPH 333
Query: 369 SVGRGLRAGPRAPDAGSFWDPNPQTLAPHPQASRRPRAGCSLSLQPPHQRGLRDGCPSAA 428
++G+G+ P P+ G P+P +L P ++ P S S++
Sbjct: 334 AMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSS 393
Query: 429 GRLSP-----ALPA-----PSPREVTLGSHVP----------ARVSRRPCPPTPAELNPA 468
SP ALP+ P P +++ + P A S+ P PP P A
Sbjct: 394 SSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLA 453
Query: 469 TSSPRPLGPLRPRAGGQSSGHP 490
S+ P GP P G QS+ HP
Sbjct: 454 NSNAHP-GPFPPSTGAQSTAHP 474
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,553,251
Number of Sequences: 37866
Number of extensions: 2210199
Number of successful extensions: 15194
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 1320
Number of HSP's that attempted gapping in prelim test: 10736
Number of HSP's gapped (non-prelim): 4835
length of query: 536
length of database: 18,247,518
effective HSP length: 107
effective length of query: 429
effective length of database: 14,195,856
effective search space: 6090022224
effective search space used: 6090022224
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.