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Search of human proteins with 239743976
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743976 PREDICTED: hypothetical protein [Homo sapiens]
(378 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749721 PREDICTED: hypothetical protein [Homo sapiens] 795 0.0
gi|239743976 PREDICTED: hypothetical protein [Homo sapiens] 795 0.0
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 57 4e-08
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 53 4e-07
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 52 1e-06
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 52 1e-06
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 51 1e-06
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 50 3e-06
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 50 4e-06
gi|19924099 synapsin I isoform Ia [Homo sapiens] 49 6e-06
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 49 1e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 48 1e-05
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 48 1e-05
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 48 2e-05
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 48 2e-05
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 48 2e-05
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 47 2e-05
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 47 4e-05
gi|40353727 synaptopodin isoform A [Homo sapiens] 47 4e-05
gi|19924097 synapsin I isoform Ib [Homo sapiens] 47 4e-05
gi|150170670 piccolo isoform 2 [Homo sapiens] 46 5e-05
gi|150378539 piccolo isoform 1 [Homo sapiens] 46 5e-05
gi|41281612 zinc finger protein 828 [Homo sapiens] 46 6e-05
gi|11386183 WAS protein family, member 2 [Homo sapiens] 45 8e-05
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 45 1e-04
gi|118402590 myosin XV [Homo sapiens] 44 2e-04
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 44 2e-04
gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo ... 44 2e-04
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 44 2e-04
gi|20336477 B-cell CLL/lymphoma 7C [Homo sapiens] 44 3e-04
>gi|239749721 PREDICTED: hypothetical protein [Homo sapiens]
Length = 378
Score = 795 bits (2054), Expect = 0.0
Identities = 378/378 (100%), Positives = 378/378 (100%)
Query: 1 MATSLTPRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPR 60
MATSLTPRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPR
Sbjct: 1 MATSLTPRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPR 60
Query: 61 PVPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANR 120
PVPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANR
Sbjct: 61 PVPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANR 120
Query: 121 SRQRQSTPHRPANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASP 180
SRQRQSTPHRPANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASP
Sbjct: 121 SRQRQSTPHRPANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASP 180
Query: 181 RRCERCLTSDVSRLAFHGGSPPNPKAPGRQALQPEARRPMGATSAWLDQWKRRKGGTSLL 240
RRCERCLTSDVSRLAFHGGSPPNPKAPGRQALQPEARRPMGATSAWLDQWKRRKGGTSLL
Sbjct: 181 RRCERCLTSDVSRLAFHGGSPPNPKAPGRQALQPEARRPMGATSAWLDQWKRRKGGTSLL 240
Query: 241 TGWLGTPPPPPPRVPPLGLQRLAARGVLVCLERWPFCGVCDRDQGGAKSPGVWGVPRYVG 300
TGWLGTPPPPPPRVPPLGLQRLAARGVLVCLERWPFCGVCDRDQGGAKSPGVWGVPRYVG
Sbjct: 241 TGWLGTPPPPPPRVPPLGLQRLAARGVLVCLERWPFCGVCDRDQGGAKSPGVWGVPRYVG 300
Query: 301 SVRFRANGDQKLQDAGESLRRSRTLTAPSPPGSRAAGTAALSAGGPGSQASGGPRPGLAA 360
SVRFRANGDQKLQDAGESLRRSRTLTAPSPPGSRAAGTAALSAGGPGSQASGGPRPGLAA
Sbjct: 301 SVRFRANGDQKLQDAGESLRRSRTLTAPSPPGSRAAGTAALSAGGPGSQASGGPRPGLAA 360
Query: 361 LPPRLPGYGADGLGAPRR 378
LPPRLPGYGADGLGAPRR
Sbjct: 361 LPPRLPGYGADGLGAPRR 378
>gi|239743976 PREDICTED: hypothetical protein [Homo sapiens]
Length = 378
Score = 795 bits (2054), Expect = 0.0
Identities = 378/378 (100%), Positives = 378/378 (100%)
Query: 1 MATSLTPRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPR 60
MATSLTPRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPR
Sbjct: 1 MATSLTPRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPR 60
Query: 61 PVPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANR 120
PVPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANR
Sbjct: 61 PVPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANR 120
Query: 121 SRQRQSTPHRPANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASP 180
SRQRQSTPHRPANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASP
Sbjct: 121 SRQRQSTPHRPANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASP 180
Query: 181 RRCERCLTSDVSRLAFHGGSPPNPKAPGRQALQPEARRPMGATSAWLDQWKRRKGGTSLL 240
RRCERCLTSDVSRLAFHGGSPPNPKAPGRQALQPEARRPMGATSAWLDQWKRRKGGTSLL
Sbjct: 181 RRCERCLTSDVSRLAFHGGSPPNPKAPGRQALQPEARRPMGATSAWLDQWKRRKGGTSLL 240
Query: 241 TGWLGTPPPPPPRVPPLGLQRLAARGVLVCLERWPFCGVCDRDQGGAKSPGVWGVPRYVG 300
TGWLGTPPPPPPRVPPLGLQRLAARGVLVCLERWPFCGVCDRDQGGAKSPGVWGVPRYVG
Sbjct: 241 TGWLGTPPPPPPRVPPLGLQRLAARGVLVCLERWPFCGVCDRDQGGAKSPGVWGVPRYVG 300
Query: 301 SVRFRANGDQKLQDAGESLRRSRTLTAPSPPGSRAAGTAALSAGGPGSQASGGPRPGLAA 360
SVRFRANGDQKLQDAGESLRRSRTLTAPSPPGSRAAGTAALSAGGPGSQASGGPRPGLAA
Sbjct: 301 SVRFRANGDQKLQDAGESLRRSRTLTAPSPPGSRAAGTAALSAGGPGSQASGGPRPGLAA 360
Query: 361 LPPRLPGYGADGLGAPRR 378
LPPRLPGYGADGLGAPRR
Sbjct: 361 LPPRLPGYGADGLGAPRR 378
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 56.6 bits (135), Expect = 4e-08
Identities = 90/365 (24%), Positives = 123/365 (33%), Gaps = 43/365 (11%)
Query: 7 PRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRP-VPQL 65
P+ PPP +G PPQ K+R P S + + P PP+ G GPPP P PQ
Sbjct: 89 PQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGP----PPQ---GGNQPQGPPPPPGKPQG 141
Query: 66 PDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANRSRQRQ 125
P P+ P P PP + +SR S+ +P PPP + N+ +
Sbjct: 142 PPPQGGNKPQGPPPPGKPQGPPPQGDNKSR-----SSRSPPGKPQGPPP-QGGNQPQGPP 195
Query: 126 STPHRPANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASPRRCER 185
P +P P + P + P D SQS RS P+
Sbjct: 196 PPPGKPQGPPPQGGNKPQGP-------PPPGKPQGPPPQGDNKSQSA-RSPPGKPQGPPP 247
Query: 186 CLTSDVSRLAFHGGSPPN--PKAPGRQALQPE--ARRPMGATSAWLDQWKRRKGGTSLLT 241
GG+ P P PG+ P +P G Q +GG+ +
Sbjct: 248 -----------QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRS 296
Query: 242 GWLGTPPPPPPRVPPLGLQRLAARGVLVCLERWPFCGVCDRDQGGAKSPGVWGVPRYVGS 301
+PP P PP G + + P ++ Q G PG P G
Sbjct: 297 S--RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ-GPPPPGKPQGPPPQGG 353
Query: 302 VRFRANGDQKLQDAGESLRRSRTLTAPSPPGSRAAGTAALSAGGPGSQASGGPRPGLAAL 361
+ R+ + G + P PP A G P Q G PRP
Sbjct: 354 SKSRSARSPPGKPQGPPQQEGNNPQGPPPP---AGGNPQQPQAPPAGQPQGPPRPPQGGR 410
Query: 362 PPRLP 366
P R P
Sbjct: 411 PSRPP 415
>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 53.1 bits (126), Expect = 4e-07
Identities = 103/336 (30%), Positives = 127/336 (37%), Gaps = 62/336 (18%)
Query: 8 RLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPP-----RPV 62
R P R P PG AR + +QR H Q S PP R L S P PV
Sbjct: 45 RCRVPSGLRRLADPIPGNARAGVARTEQRDHSQ-SSPPCRRLASYSFWSSAPWRELTLPV 103
Query: 63 PQLPDAALPLSPEL-RRPSTVPDQP-PATDNRRSRMAPALSTVCGAHRPLAPPPGRAANR 120
AA P SP RP QP P+ S P S G RP A PP
Sbjct: 104 SPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEGEPRPYALPP------ 157
Query: 121 SRQRQSTPHRPANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASP 180
R+S RP W D SP A + SR A P S+ FRS R P
Sbjct: 158 ---RESPAPRPFRW-----GDPFSP--APPRPQPPSRPAAQP-----PSRPAFRSPR--P 200
Query: 181 RRCERCLTSDVSRLAFHGGSPPNPKAPGRQALQPEARRPMGATSAWLDQWKRRKGGTSLL 240
R + V + F +P A G L+ + RRP A +R +GG L+
Sbjct: 201 VRGPHPRRAVVVAVLFGVQAPRRDVAEG--GLRRDGRRPGLAP-------QRGRGGLLLV 251
Query: 241 T--------GWLGTPPPPPPRVPPLGLQR--LAARGVL--VCLERWP--------FCGVC 280
LG P PPR P+G+ R +A R L VC+ P C
Sbjct: 252 VLHAATVQRPRLGRGPSRPPR-GPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAA 310
Query: 281 DRDQGGAKSPGVWGVPR-YVGSVRFRANGDQKLQDA 315
QGGA P PR ++GS+ ++G +L DA
Sbjct: 311 FPLQGGATLPSSLPAPRLHLGSLLPSSSGGARLGDA 346
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 51.6 bits (122), Expect = 1e-06
Identities = 45/142 (31%), Positives = 53/142 (37%), Gaps = 27/142 (19%)
Query: 4 SLTPRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRP-- 61
S+ PPP +PP P RP +SS P SRP GPPP P
Sbjct: 276 SIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRP-----------GPPPLPPS 324
Query: 62 ------VPQLPDAALPLS---PELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAP 112
P+LP L LS P L P PP R P + G PL P
Sbjct: 325 SSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPS---ERPPPPVRDPPGRSGPLPP 381
Query: 113 PP--GRAANRSRQRQSTPHRPA 132
PP R + SR +TP P+
Sbjct: 382 PPPVSRNGSTSRALPATPQLPS 403
Score = 49.7 bits (117), Expect = 4e-06
Identities = 88/317 (27%), Positives = 116/317 (36%), Gaps = 84/317 (26%)
Query: 2 ATSLTPRLTPPPSTGRGRPPQPG-KARPPSSSGDQRRHPQLSR--PPRRDLTGGSDLGPP 58
+TS P +PP GR P PG ++ PP PQ +R PPR D+ D PP
Sbjct: 135 STSAKP-FSPPSGPGRFPVPSPGHRSGPPE--------PQRNRMPPPRPDVGSKPDSIPP 185
Query: 59 P-----RPVPQLPD--AALPLSPELRRPSTVPDQPPATDNRRS-------RMAPALSTVC 104
P RP+ P + P+ R+PS P PP NR + R +P S+
Sbjct: 186 PVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSP 245
Query: 105 GAHRPLAPP-PGRA------------ANR-SRQRQSTPHRPANWRPYALDDTISPSFAWC 150
++RP PP P RA NR S R++ P P + T PS
Sbjct: 246 FSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPS---A 302
Query: 151 SAEAA------SRDWAVPETTDAASQSRFRSCRASPRRCER--CLTSDVSRLAFHGGSPP 202
S++A SR P ++ +PR +R L+S L G S P
Sbjct: 303 SSQAPPPPPPPSRPGPPPLPPSSSGNDE------TPRLPQRNLSLSSSTPPLPSPGRSGP 356
Query: 203 NPKAPGRQALQPEARRP--------------MGATSAWLD---QWKRRKGGTSLLTG--- 242
P P + P P G+TS L Q R G S +G
Sbjct: 357 LPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRP 416
Query: 243 -------WLGTPPPPPP 252
G PPPPPP
Sbjct: 417 PLPPDRPSAGAPPPPPP 433
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 51.6 bits (122), Expect = 1e-06
Identities = 45/142 (31%), Positives = 53/142 (37%), Gaps = 27/142 (19%)
Query: 4 SLTPRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRP-- 61
S+ PPP +PP P RP +SS P SRP GPPP P
Sbjct: 276 SIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRP-----------GPPPLPPS 324
Query: 62 ------VPQLPDAALPLS---PELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAP 112
P+LP L LS P L P PP R P + G PL P
Sbjct: 325 SSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPS---ERPPPPVRDPPGRSGPLPP 381
Query: 113 PP--GRAANRSRQRQSTPHRPA 132
PP R + SR +TP P+
Sbjct: 382 PPPVSRNGSTSRALPATPQLPS 403
Score = 49.7 bits (117), Expect = 4e-06
Identities = 88/317 (27%), Positives = 116/317 (36%), Gaps = 84/317 (26%)
Query: 2 ATSLTPRLTPPPSTGRGRPPQPG-KARPPSSSGDQRRHPQLSR--PPRRDLTGGSDLGPP 58
+TS P +PP GR P PG ++ PP PQ +R PPR D+ D PP
Sbjct: 135 STSAKP-FSPPSGPGRFPVPSPGHRSGPPE--------PQRNRMPPPRPDVGSKPDSIPP 185
Query: 59 P-----RPVPQLPD--AALPLSPELRRPSTVPDQPPATDNRRS-------RMAPALSTVC 104
P RP+ P + P+ R+PS P PP NR + R +P S+
Sbjct: 186 PVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSP 245
Query: 105 GAHRPLAPP-PGRA------------ANR-SRQRQSTPHRPANWRPYALDDTISPSFAWC 150
++RP PP P RA NR S R++ P P + T PS
Sbjct: 246 FSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPS---A 302
Query: 151 SAEAA------SRDWAVPETTDAASQSRFRSCRASPRRCER--CLTSDVSRLAFHGGSPP 202
S++A SR P ++ +PR +R L+S L G S P
Sbjct: 303 SSQAPPPPPPPSRPGPPPLPPSSSGNDE------TPRLPQRNLSLSSSTPPLPSPGRSGP 356
Query: 203 NPKAPGRQALQPEARRP--------------MGATSAWLD---QWKRRKGGTSLLTG--- 242
P P + P P G+TS L Q R G S +G
Sbjct: 357 LPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRP 416
Query: 243 -------WLGTPPPPPP 252
G PPPPPP
Sbjct: 417 PLPPDRPSAGAPPPPPP 433
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 51.2 bits (121), Expect = 1e-06
Identities = 44/138 (31%), Positives = 52/138 (37%), Gaps = 28/138 (20%)
Query: 11 PPPSTG---RGRPPQPGKAR-PPSSSGDQRRHPQLSRPPR-------RDLTGGSDLGPPP 59
PPP G +G PP+PGK PP G+Q + P PPR G GPPP
Sbjct: 186 PPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGP----PPRPGKPEGPPSQGGNKPQGPPP 241
Query: 60 RP-VPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAA 118
P PQ P P+ P P PP + P A +P PPP
Sbjct: 242 HPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPP-----PAGKPQGPPPPPQG 296
Query: 119 NRSRQRQSTPHRPANWRP 136
R PHRP +P
Sbjct: 297 GR-------PHRPPQGQP 307
Score = 43.9 bits (102), Expect = 2e-04
Identities = 42/143 (29%), Positives = 53/143 (37%), Gaps = 20/143 (13%)
Query: 8 RLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPR---PVPQ 64
R PPP GRPPQ G S G R + PP + G GPPPR P Q
Sbjct: 49 RTPPPPGKPEGRPPQGGN----QSQGPPPRPGKPEGPPPQG--GNQSQGPPPRPGKPEGQ 102
Query: 65 LPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAP--PPGRAANRSR 122
P RP P+ PP +S+ P RP P PP + N+S+
Sbjct: 103 PPQGGNQSQGPPPRPGK-PEGPPPQGGNQSQGPPP--------RPGKPEGPPPQGGNQSQ 153
Query: 123 QRQSTPHRPANWRPYALDDTISP 145
P +P P + + P
Sbjct: 154 GPPPRPGKPEGPPPQGGNQSQGP 176
Score = 37.0 bits (84), Expect = 0.029
Identities = 36/131 (27%), Positives = 50/131 (38%), Gaps = 17/131 (12%)
Query: 22 QPGKARPPSSSGDQRRHPQLSRPPRRDLTGGS-DLGPPPR------PVPQLPDAALPLSP 74
+P RP + QR P +P R GG+ GPPPR P PQ + + P
Sbjct: 35 KPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPP 94
Query: 75 ELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANRSRQRQSTPHRPANW 134
RP QPP N+ P +P PPP + N+S+ P +P
Sbjct: 95 ---RPGKPEGQPPQGGNQSQGPPPR------PGKPEGPPP-QGGNQSQGPPPRPGKPEGP 144
Query: 135 RPYALDDTISP 145
P + + P
Sbjct: 145 PPQGGNQSQGP 155
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 50.4 bits (119), Expect = 3e-06
Identities = 44/134 (32%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 7 PRLTPPPSTGRGRPPQPGKARPPSS--SGDQRRHPQLSRPPRRDLTGGS-DLGPPPRPVP 63
P+ PPP +G PPQ K+R P S Q PQ +P GG+ GPPP P
Sbjct: 68 PQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKP 127
Query: 64 QLPDA-ALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANRSR 122
Q P A S R P P PP + + P +P APP G
Sbjct: 128 QGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQ-GPPPPAGGNPQQPQAPPAG------- 179
Query: 123 QRQSTPHRPANWRP 136
Q Q P P RP
Sbjct: 180 QPQGPPRPPQGGRP 193
Score = 42.0 bits (97), Expect = 0.001
Identities = 35/132 (26%), Positives = 46/132 (34%), Gaps = 33/132 (25%)
Query: 11 PPPSTG---RGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPD 67
P P G +G PP PGK + P G G GPPP PQ P
Sbjct: 39 PSPQGGNKPQGPPPPPGKPQGPPPQG-----------------GNKPQGPPPPGKPQGPP 81
Query: 68 AALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAP--------PPGRAAN 119
S R P P PP + P G ++P P PP + +
Sbjct: 82 PQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQ-----GGNKPQGPPPPGKPQGPPAQGGS 136
Query: 120 RSRQRQSTPHRP 131
+S+ +S P +P
Sbjct: 137 KSQSARSPPGKP 148
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 49.7 bits (117), Expect = 4e-06
Identities = 87/366 (23%), Positives = 118/366 (32%), Gaps = 65/366 (17%)
Query: 16 GRGRPPQPG-KARPPSSSGDQRRHPQLSRPPRRDLTGGSDLG--------PPPRPVPQLP 66
G RPP P + PP++S ++ P L+R + + S PPP
Sbjct: 431 GMPRPPPPSTRPLPPTTSSSKKPIPTLARTEAKITSHASKPASARTSTHKPPPFTALSSS 490
Query: 67 DAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANRSRQRQS 126
A P S RP PP + R APA+ T A P G A++ +S
Sbjct: 491 PAPTPGSTRSTRPPATM-VPPTSGTSTPRTAPAVPTPGSAPTGSKKPIGSEASKKAGPKS 549
Query: 127 TPHRPANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASPRRCERC 186
+P +P RP + P + + + +TT A + + +SPR
Sbjct: 550 SPRKPVPLRPGKAARDV-PLSDLTTRPSPRQPQPSQQTTPALVLAPAQFLSSSPRP---- 604
Query: 187 LTSDVSRLAFHGGSPPNPKAPGRQALQPEARRPMGATSAWLDQWKRRKGGTSLLTGWLGT 246
TS + GS P P G + + P G L G G
Sbjct: 605 -TSSGYSIFHLAGSTPFPLLMGPPGPKGDCGLP----------------GPPGLPGLPGI 647
Query: 247 PPPPPPRVPPLGLQRLAARGVLVCLERWPFCGVCDRDQGGAKSPGVWGVPRYVGSVRFRA 306
P PR PP G +PG+ G P G
Sbjct: 648 PGARGPRGPP----------------------------GPYGNPGLPGPPGAKGQKGDPG 679
Query: 307 NGDQKLQDAGESLRRSRTLTA-PSPPGSRAAGTAALSAGGPGSQASGGPR--PGLAALPP 363
K D + L+ P PPG + AG PG Q GP PG P
Sbjct: 680 LSPGKAHDGAKGDMGLPGLSGNPGPPGRKGHKGYPGPAGHPGEQGQPGPEGSPGAKGYPG 739
Query: 364 R--LPG 367
R LPG
Sbjct: 740 RQGLPG 745
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 49.3 bits (116), Expect = 6e-06
Identities = 73/270 (27%), Positives = 98/270 (36%), Gaps = 46/270 (17%)
Query: 12 PPSTGRGRPPQPGKARPPSSSGDQRRHPQL-SRPPRRDLTGGSDLGPPPRPVPQLPDAAL 70
PP+ + RPP G P G QR+ P L RPP + S LGPP A
Sbjct: 455 PPA--QQRPPPQG-GPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPP---------AGS 502
Query: 71 PLSPELRRPSTVPDQP-----PATDNRRSRMAPALSTVCGAHRPLAPPPGR-AANRSRQR 124
PL L P++ P QP P T + + P A P APP R A+ S QR
Sbjct: 503 PLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPV------AGGPGAPPAARPPASPSPQR 556
Query: 125 QSTPHRPANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASPRRCE 184
Q+ P P R ++ P + R + A +R ++ +A P
Sbjct: 557 QAGP--PQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTR-QASQAGP---- 609
Query: 185 RCLTSDVSRLAFHGGSPPNPKAPG-------RQALQPEARRPMGATSAWLDQWKRRKGGT 237
V R P P PG + A +P P AT+A + +
Sbjct: 610 ------VPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLNKS 663
Query: 238 SLLTGWLGTPPPPPPRVPPLGLQRLAARGV 267
LT P P PPR P L + A +
Sbjct: 664 QSLTNAFNLPEPAPPR-PSLSQDEVKAETI 692
Score = 32.7 bits (73), Expect = 0.55
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 10 TPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPDAA 69
T PP+T + RP PG A P PQL++ P +D+ + P PQL + +
Sbjct: 613 TGPPTTQQPRPSGPGPAGRPK--------PQLAQKPSQDVPPPATAAAGGPPHPQL-NKS 663
Query: 70 LPLSPELRRPSTVPDQP 86
L+ P P +P
Sbjct: 664 QSLTNAFNLPEPAPPRP 680
Score = 28.9 bits (63), Expect = 8.0
Identities = 31/133 (23%), Positives = 42/133 (31%), Gaps = 13/133 (9%)
Query: 6 TPRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPR----- 60
+P P + PP G+ R P +RPP + GPP
Sbjct: 510 SPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASP-SPQRQAGPPQATRQTS 568
Query: 61 ---PVPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALST---VCGAHRPLAP-P 113
P P A P + + P P P + S+ P T RP P P
Sbjct: 569 VSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGP 628
Query: 114 PGRAANRSRQRQS 126
GR + Q+ S
Sbjct: 629 AGRPKPQLAQKPS 641
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 48.5 bits (114), Expect = 1e-05
Identities = 38/115 (33%), Positives = 44/115 (38%), Gaps = 10/115 (8%)
Query: 7 PRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGS-----DLGP-PPR 60
P L PP G PP PG+ PP +G R RPP L G LGP PP
Sbjct: 239 PPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRG---DRPPPPVLFPGQPFGQPPLGPLPPG 295
Query: 61 PVPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPG 115
P P +P P P + P P + P L+ H P PPPG
Sbjct: 296 PPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLP-GPPPG 349
Score = 30.8 bits (68), Expect = 2.1
Identities = 28/82 (34%), Positives = 30/82 (36%), Gaps = 10/82 (12%)
Query: 11 PPPSTGRGRPPQ--PGKARPPSSSGDQRRHPQL---SRPPRRDLTGGSDLGPPPRPVPQL 65
P GRGR P PG R P +G P PPR L GPP P P
Sbjct: 198 PQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPP-- 255
Query: 66 PDAALPLSPELRRPSTVPDQPP 87
L P L P D+PP
Sbjct: 256 ---GQVLPPPLAGPPNRGDRPP 274
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 48.1 bits (113), Expect = 1e-05
Identities = 63/227 (27%), Positives = 87/227 (38%), Gaps = 37/227 (16%)
Query: 1 MATSLTPRLTPPPS--TGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRD---------- 48
+++S TP +P S + RG P P P G Q P PPR+D
Sbjct: 242 LSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSS 301
Query: 49 --LTGGSDLGPPPRPVPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGA 106
L S G RPVP +AA PL P+T+P PP +AP + +
Sbjct: 302 SPLATPSPSGTKARPVPPPDNAATPL------PATLPPSPPLA--TPLPLAPPSPSAPPS 353
Query: 107 HRPLAPPPGRAANRSRQRQSTPHRPANWRPYALDDTISP-----SFAWCSAEAASRDWAV 161
+ L PP +++ +TP A P +L TI P S S +A A+
Sbjct: 354 LQTLPSPPATPPSQAPPSMTTPPMQA---PPSL-QTIPPIQVPHSLTSPSLQAPPSPLAL 409
Query: 162 PE---TTDAAS---QSRFRSCRASPRRCERCLTSDVSRLAFHGGSPP 202
TT S Q+ SPR+ + LTS + SPP
Sbjct: 410 SSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPP 456
Score = 46.6 bits (109), Expect = 4e-05
Identities = 68/255 (26%), Positives = 84/255 (32%), Gaps = 23/255 (9%)
Query: 7 PRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLP 66
P L PP G PP A PP + P L PP L P P PQ P
Sbjct: 596 PALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPP--SPPASPPLSPLATPSPQAP 653
Query: 67 DA------ALPLSPELRRPSTVPDQPPATDN-RRSRMAPALSTVCGAHRPLAPPPGRAAN 119
+A P SP P P PPA+ S P+ + A PL PP A+
Sbjct: 654 NALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPAS 713
Query: 120 RSRQRQSTPHRPANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRAS 179
+TP P A +P + AS P + A R A+
Sbjct: 714 PPMSPSATP------PPQAPPPLAAPPLQVPPSPPAS----PPMSPSATPPPRVPPLLAA 763
Query: 180 PRRCERCLTSDVSRLAFHGGSPPNPKAPGRQALQPEARRPMGATSAWLDQWKRRKGGTSL 239
P + S + L + P P+AP A P P + A SL
Sbjct: 764 PPL--QVPPSPPASLPMSPLAKPPPQAPPALATPPLQALP--SPPASFPGQAPFSPSASL 819
Query: 240 LTGWLGTPPPPPPRV 254
L TPPP P V
Sbjct: 820 PMSPLATPPPQAPPV 834
Score = 42.0 bits (97), Expect = 0.001
Identities = 66/256 (25%), Positives = 86/256 (33%), Gaps = 57/256 (22%)
Query: 5 LTPRLTPPPSTGRGRPPQ---PGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRP 61
++P TPP PP P PPS P + PP+ L PP
Sbjct: 685 VSPSATPPSQA----PPSLAAPPLQVPPSPPASPPMSPSATPPPQAP----PPLAAPPLQ 736
Query: 62 VPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRA--AN 119
VP P A+ P+SP P VP A + PA + PLA PP +A A
Sbjct: 737 VPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMS----PLAKPPPQAPPAL 792
Query: 120 RSRQRQSTPHRPANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRAS 179
+ Q+ P PA++ A SPS A A P
Sbjct: 793 ATPPLQALPSPPASFPGQA---PFSPS-----ASLPMSPLATP----------------- 827
Query: 180 PRRCERCLTSDVSRLAFHGGSPPNPKAPGRQALQPEARRPMGATSAWLDQWKRRKGGTSL 239
P + L + + ++ PP+P P LQ R P + G L
Sbjct: 828 PPQAPPVLAAPLLQV------PPSP--PASPTLQAPRRPPTPGPDTSVS-------GPRL 872
Query: 240 LTGWLGTPPPPPPRVP 255
PPPPP R P
Sbjct: 873 TLALAPGPPPPPSRSP 888
Score = 37.4 bits (85), Expect = 0.022
Identities = 74/289 (25%), Positives = 102/289 (35%), Gaps = 52/289 (17%)
Query: 9 LTPPPSTGRGRPPQPGKARPPSSSGDQ---------RRHPQ----LSRPPRRDLTGGSD- 54
L P + R RPP G + SS+ + RR P L RP R L+ +
Sbjct: 189 LPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATP 248
Query: 55 ------LGPPPRPVPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHR 108
GP R P+ P A P P+ + + +PP R APAL + +
Sbjct: 249 LSSPARSGPSARGTPRAP--AHPSQPKPKGLQAL--RPPQVTPPRKDAAPALGPLSSS-- 302
Query: 109 PLA------------PPPGRAANRSRQRQSTPHRPANWRPYAL---DDTISPSFAWC-SA 152
PLA PPP AA + + P P P L + PS S
Sbjct: 303 PLATPSPSGTKARPVPPPDNAA--TPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSP 360
Query: 153 EAASRDWAVPETTDAASQSRFRSCRASPRRCERCLTSDVSRLAFHGGSPPNPKA-PGRQA 211
A A P T Q+ P + LTS + +PP+P A QA
Sbjct: 361 PATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQ------APPSPLALSSLQA 414
Query: 212 LQPEARRPMGATSAWLDQWKRR-KGGTSLLTGWLGTPPPPPPRVPPLGL 259
+ AT ++L R+ + + + TPP PP PL L
Sbjct: 415 TTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSL 463
Score = 33.5 bits (75), Expect = 0.32
Identities = 61/254 (24%), Positives = 86/254 (33%), Gaps = 41/254 (16%)
Query: 12 PPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRP---PRRDLTGGSDLGPPPRPVPQLPDA 68
PP++GRG P K P R +RP ++ L ++ + P
Sbjct: 94 PPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKR 153
Query: 69 ALPLSPELRRPST--VPDQPPATDNRRSRMAPALSTVCGAHRPL-----APP---PGRAA 118
+ LS RR ++ P P RRSR A T G RP PP P ++
Sbjct: 154 S-ALSAGARRDTSGPTPGTPSPAMARRSR---AAGTEVGLPRPAPSARPRPPTEGPRKSV 209
Query: 119 NRSRQRQSTPHRPANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRA 178
+ + + +T PA R PS ASR + T ++ S R
Sbjct: 210 SSASEHSTTEPSPAARR--------RPSAGGGLQRPASRSLSSSATPLSSPARSGPSARG 261
Query: 179 SPRRCERCLTSDVSRLAFHGGSPPNPKAPGRQALQ-PEARRPMGATSAWLDQWKRRKGGT 237
+PR P PK G QAL+ P+ P + L T
Sbjct: 262 TPRA---------------PAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLAT 306
Query: 238 SLLTGWLGTPPPPP 251
+G P PPP
Sbjct: 307 PSPSGTKARPVPPP 320
Score = 29.3 bits (64), Expect = 6.1
Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 23/127 (18%)
Query: 5 LTPRLTPPPSTGRGRPPQPGKARPPSS--SGDQRRHPQLSRPPRRDLTGG---SDLGPPP 59
L+ + PP T P P PP+S + P L+ PP + + L PP
Sbjct: 504 LSSLIMPPLETQSSLAP-PSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPP 562
Query: 60 RPVP---QLPDAALPLSPELRRPSTVPDQPP------ATDNRRSRMAPALSTVCGAHRPL 110
P P Q P + L P PS++ PP A+ + +P LS PL
Sbjct: 563 CPAPCPLQAPPSPLTTPPP-ETPSSIATPPPQAPPALASPPLQGLPSPPLS-------PL 614
Query: 111 APPPGRA 117
A PP +A
Sbjct: 615 ATPPPQA 621
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 48.1 bits (113), Expect = 1e-05
Identities = 42/134 (31%), Positives = 56/134 (41%), Gaps = 23/134 (17%)
Query: 11 PPPSTG---RGRPPQPGK--ARPPSSSG-DQRRHPQLSRPPRRDLTGGSDL-------GP 57
PPP G +G PP PGK RPP Q P +P R GG+ G
Sbjct: 60 PPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGK 119
Query: 58 PPRPVPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRA 117
P RP PQ + + P P P++PP +S+ P +P PPP +
Sbjct: 120 PERPPPQGGNQSHRPPP----PPGKPERPPPQGGNQSQGPPP-----HPGKPEGPPP-QE 169
Query: 118 ANRSRQRQSTPHRP 131
N+SR +S P +P
Sbjct: 170 GNKSRSARSPPGKP 183
Score = 45.4 bits (106), Expect = 8e-05
Identities = 37/127 (29%), Positives = 46/127 (36%), Gaps = 17/127 (13%)
Query: 11 PPPSTG---RGRPPQPGK--ARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQL 65
PPP G +G PP PGK PP R P P R G + P P P
Sbjct: 102 PPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGK 161
Query: 66 PDAALP----LSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANRS 121
P+ P S R P P PP + + + P +P PPP A
Sbjct: 162 PEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPP------PGKPQGPPP--AGGNP 213
Query: 122 RQRQSTP 128
+Q Q+ P
Sbjct: 214 QQPQAPP 220
Score = 35.4 bits (80), Expect = 0.085
Identities = 53/239 (22%), Positives = 76/239 (31%), Gaps = 40/239 (16%)
Query: 22 QPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPDAALPLSPELRRPST 81
+P RP + QR P +P GG+ PP P P P+ P +
Sbjct: 35 KPEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPP-PPPGKPEGRPPQGGNQSQGPP 93
Query: 82 ----VPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANRSRQRQSTPHRPANWRPY 137
P++PP +S+ P PPPG+ Q + HRP P
Sbjct: 94 PHPGKPERPPPQGGNQSQGTP-------------PPPGKPERPPPQGGNQSHRPP---PP 137
Query: 138 ALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASPRRCERCLTSDVSRLAFH 197
P ++ PE ++ RS R+ P + + +
Sbjct: 138 PGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQE------- 190
Query: 198 GGSPPNPKAPGRQALQPEARRPMGATSAWLDQWKRRKGGTSLLTGWLGTPPPPPPRVPP 256
G P P PG+ P+ P G Q + G G PPPP PP
Sbjct: 191 GNKPQGPPPPGK----PQGPPPAGGNP---QQPQAPPAGKP-----QGPPPPPQGGRPP 237
Score = 32.7 bits (73), Expect = 0.55
Identities = 29/82 (35%), Positives = 33/82 (40%), Gaps = 27/82 (32%)
Query: 11 PPPSTGR--GRPPQ-----------PGKAR-PPSSSGDQRRHPQLSRPPRRDLTGGSDLG 56
PPP G+ G PPQ PGK + PP G++ PQ PP G G
Sbjct: 155 PPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNK---PQGPPPP------GKPQG 205
Query: 57 PPPR----PVPQLPDAALPLSP 74
PPP PQ P A P P
Sbjct: 206 PPPAGGNPQQPQAPPAGKPQGP 227
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 47.8 bits (112), Expect = 2e-05
Identities = 78/289 (26%), Positives = 96/289 (33%), Gaps = 68/289 (23%)
Query: 9 LTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRP--VPQLP 66
L PPP G P + PP G P + PP L L PPP P P P
Sbjct: 138 LIPPPPPGPAPGPPQDISEPPG--GSPLPSPPSTAPPPPPLL----LEPPPPPSMAPPPP 191
Query: 67 DAALPLSPE--LRRPS--TVPD------------QPPATDNRRSRMAPALSTVCGAHRPL 110
LSP L PS T PD PP + APA G L
Sbjct: 192 PVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASPHTVGTR--L 249
Query: 111 APPPG------RAANRSRQRQST----PHRPANWRPYALDDTISPSFAWCSAEAASRDWA 160
PP G A RQ ++T P PA + AL P + R +
Sbjct: 250 FPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPEPHLTF------PRSFK 303
Query: 161 VPETTDAASQS-RFRSCRASPRRCERCLTSDVSRL----AFH--------GGSPPNPKAP 207
VP T + S + + +PR+ E SRL +FH P P P
Sbjct: 304 VPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIRPASQVYPDRAPEPDCP 363
Query: 208 GRQALQPEARRPMGATSAWLDQWKRRKGGTSLLTGWLGTPPPPPPRVPP 256
G A +G + + D+ GTPPP PP PP
Sbjct: 364 GELKATAPASPRLGQSQSQADERA-------------GTPPPAPPLPPP 399
Score = 29.3 bits (64), Expect = 6.1
Identities = 38/146 (26%), Positives = 51/146 (34%), Gaps = 25/146 (17%)
Query: 2 ATSLTPRLTPPPSTGRGRPPQ---PGKARPPSSSGDQRR----HPQL--SRPPRRDLTGG 52
AT P P P + RP P +A P G+ + P+L S+ + G
Sbjct: 330 ATKKAPSRLPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGT 389
Query: 53 SDLGPP-PRPVPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPA--LSTVCGAHRP 109
PP P P P LP A PL P PP +++ PA T +
Sbjct: 390 PPPAPPLPPPAPPLPPPAPPLPPA---------APPLPCAQKAAHPPAGFTKTPKSSSPA 440
Query: 110 LAPPPGRAANRSRQRQSTPHRPANWR 135
L P P N + P +WR
Sbjct: 441 LKPKP----NPPSPENTASSAPVDWR 462
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 47.8 bits (112), Expect = 2e-05
Identities = 78/289 (26%), Positives = 96/289 (33%), Gaps = 68/289 (23%)
Query: 9 LTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRP--VPQLP 66
L PPP G P + PP G P + PP L L PPP P P P
Sbjct: 138 LIPPPPPGPAPGPPQDISEPPG--GSPLPSPPSTAPPPPPLL----LEPPPPPSMAPPPP 191
Query: 67 DAALPLSPE--LRRPS--TVPD------------QPPATDNRRSRMAPALSTVCGAHRPL 110
LSP L PS T PD PP + APA G L
Sbjct: 192 PVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASPHTVGTR--L 249
Query: 111 APPPG------RAANRSRQRQST----PHRPANWRPYALDDTISPSFAWCSAEAASRDWA 160
PP G A RQ ++T P PA + AL P + R +
Sbjct: 250 FPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPEPHLTF------PRSFK 303
Query: 161 VPETTDAASQS-RFRSCRASPRRCERCLTSDVSRL----AFH--------GGSPPNPKAP 207
VP T + S + + +PR+ E SRL +FH P P P
Sbjct: 304 VPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIRPASQVYPDRAPEPDCP 363
Query: 208 GRQALQPEARRPMGATSAWLDQWKRRKGGTSLLTGWLGTPPPPPPRVPP 256
G A +G + + D+ GTPPP PP PP
Sbjct: 364 GELKATAPASPRLGQSQSQADERA-------------GTPPPAPPLPPP 399
Score = 29.3 bits (64), Expect = 6.1
Identities = 38/146 (26%), Positives = 51/146 (34%), Gaps = 25/146 (17%)
Query: 2 ATSLTPRLTPPPSTGRGRPPQ---PGKARPPSSSGDQRR----HPQL--SRPPRRDLTGG 52
AT P P P + RP P +A P G+ + P+L S+ + G
Sbjct: 330 ATKKAPSRLPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGT 389
Query: 53 SDLGPP-PRPVPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPA--LSTVCGAHRP 109
PP P P P LP A PL P PP +++ PA T +
Sbjct: 390 PPPAPPLPPPAPPLPPPAPPLPPA---------APPLPCAQKAAHPPAGFTKTPKSSSPA 440
Query: 110 LAPPPGRAANRSRQRQSTPHRPANWR 135
L P P N + P +WR
Sbjct: 441 LKPKP----NPPSPENTASSAPVDWR 462
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 47.8 bits (112), Expect = 2e-05
Identities = 78/289 (26%), Positives = 96/289 (33%), Gaps = 68/289 (23%)
Query: 9 LTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRP--VPQLP 66
L PPP G P + PP G P + PP L L PPP P P P
Sbjct: 138 LIPPPPPGPAPGPPQDISEPPG--GSPLPSPPSTAPPPPPLL----LEPPPPPSMAPPPP 191
Query: 67 DAALPLSPE--LRRPS--TVPD------------QPPATDNRRSRMAPALSTVCGAHRPL 110
LSP L PS T PD PP + APA G L
Sbjct: 192 PVLEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASPHTVGTR--L 249
Query: 111 APPPG------RAANRSRQRQST----PHRPANWRPYALDDTISPSFAWCSAEAASRDWA 160
PP G A RQ ++T P PA + AL P + R +
Sbjct: 250 FPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPEPHLTF------PRSFK 303
Query: 161 VPETTDAASQS-RFRSCRASPRRCERCLTSDVSRL----AFH--------GGSPPNPKAP 207
VP T + S + + +PR+ E SRL +FH P P P
Sbjct: 304 VPPPTPVRTSSIPVQEAQEAPRKEEGATKKAPSRLPLPPSFHIRPASQVYPDRAPEPDCP 363
Query: 208 GRQALQPEARRPMGATSAWLDQWKRRKGGTSLLTGWLGTPPPPPPRVPP 256
G A +G + + D+ GTPPP PP PP
Sbjct: 364 GELKATAPASPRLGQSQSQADERA-------------GTPPPAPPLPPP 399
Score = 29.3 bits (64), Expect = 6.1
Identities = 38/146 (26%), Positives = 51/146 (34%), Gaps = 25/146 (17%)
Query: 2 ATSLTPRLTPPPSTGRGRPPQ---PGKARPPSSSGDQRR----HPQL--SRPPRRDLTGG 52
AT P P P + RP P +A P G+ + P+L S+ + G
Sbjct: 330 ATKKAPSRLPLPPSFHIRPASQVYPDRAPEPDCPGELKATAPASPRLGQSQSQADERAGT 389
Query: 53 SDLGPP-PRPVPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPA--LSTVCGAHRP 109
PP P P P LP A PL P PP +++ PA T +
Sbjct: 390 PPPAPPLPPPAPPLPPPAPPLPPA---------APPLPCAQKAAHPPAGFTKTPKSSSPA 440
Query: 110 LAPPPGRAANRSRQRQSTPHRPANWR 135
L P P N + P +WR
Sbjct: 441 LKPKP----NPPSPENTASSAPVDWR 462
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 47.4 bits (111), Expect = 2e-05
Identities = 83/366 (22%), Positives = 109/366 (29%), Gaps = 109/366 (29%)
Query: 7 PRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRP-VPQL 65
P+ PPP +G PPQ K+R P S + + P PP+ G GPPP P PQ
Sbjct: 68 PQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGP----PPQ---GGNQPQGPPPPPGKPQG 120
Query: 66 PDAALPLSPELRRPSTVPD-QPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANRSRQR 124
P P+ P P PP D RS +P +P PPP + N+ +
Sbjct: 121 PPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSP-------PGKPQGPPP-QGGNQPQGP 172
Query: 125 QSTPHRPANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASPRRCE 184
P +P P P + P D + RS ++ P + +
Sbjct: 173 PPPPGKPQGPPPQGGKKPQGP-------PPPGKPQGPPPQGD-----KSRSSQSPPGKPQ 220
Query: 185 RCLTSDVSRLAFHGGSPP----NPKAPGRQALQPEARRPMGATSAWLDQWKRRKGGTSLL 240
G PP P+ P +P+ P G
Sbjct: 221 --------------GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP--------------- 251
Query: 241 TGWLGTPPPPPPRVPPLGLQRLAARGVLVCLERWPFCGVCDRDQGGAKSPGVWGVPRYVG 300
G PPP P+ PP QGG+KS P
Sbjct: 252 ---QGPPPPGKPQGPPA--------------------------QGGSKSQSARSPPG--- 279
Query: 301 SVRFRANGDQKLQDAGESLRRSRTLTAPSPPGSRAAGTAALSAGGPGSQASGGPRPGLAA 360
+ G + P PP A G P Q G PRP
Sbjct: 280 ------------KPQGPPQQEGNNPQGPPPP---AGGNPQQPQAPPAGQPQGPPRPPQGG 324
Query: 361 LPPRLP 366
P R P
Sbjct: 325 RPSRPP 330
Score = 39.3 bits (90), Expect = 0.006
Identities = 38/137 (27%), Positives = 48/137 (35%), Gaps = 33/137 (24%)
Query: 11 PPPSTG---RGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPD 67
P P G +G PP PGK + P G G GPPP PQ P
Sbjct: 39 PSPQGGNKPQGPPPPPGKPQGPPPQG-----------------GNKPQGPPPPGKPQGPP 81
Query: 68 AALPLSPELRRPSTVPDQPPATDNRRSRMAPAL------STVCGAHRPLA-PPPGR---- 116
S R P P PP + + P G +RP PPPG+
Sbjct: 82 PQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGP 141
Query: 117 --AANRSRQRQSTPHRP 131
++SR +S P +P
Sbjct: 142 PPQGDKSRSPRSPPGKP 158
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 46.6 bits (109), Expect = 4e-05
Identities = 36/104 (34%), Positives = 40/104 (38%), Gaps = 21/104 (20%)
Query: 11 PPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPDAAL 70
PPP RG PP P PP +SG PP R G PP P + P AA
Sbjct: 278 PPPPPSRGGPPPPPP--PPHNSGPPP-------PPARGR------GAPPPPPSRAPTAAP 322
Query: 71 PLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPP 114
P P R VP PP +RM P + P PPP
Sbjct: 323 PPPPPSRPSVAVPPPPP------NRMYPPPPPALPSSAPSGPPP 360
Score = 40.8 bits (94), Expect = 0.002
Identities = 37/111 (33%), Positives = 42/111 (37%), Gaps = 25/111 (22%)
Query: 7 PRLTPPPSTGRGRPPQP--GKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQ 64
P PPP G PP P G+ PP PP R T PP P P
Sbjct: 287 PPPPPPPPHNSGPPPPPARGRGAPPP-------------PPSRAPTAA-----PPPPPPS 328
Query: 65 LPDAALPLSPELRRPSTVPDQPPA-TDNRRSRMAPALSTVCGAHRPLAPPP 114
P A+P P R P PPA + S P +V G P+APPP
Sbjct: 329 RPSVAVPPPPPNR---MYPPPPPALPSSAPSGPPPPPPSVLGV-GPVAPPP 375
Score = 37.7 bits (86), Expect = 0.017
Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 13/88 (14%)
Query: 11 PPPSTGRGRPPQPGKARP-----------PSSSGDQRRHPQLSRPPRRDLTGGSDLGPPP 59
PPP+ GRG PP P P PS + ++ PP L + GPPP
Sbjct: 301 PPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPP 360
Query: 60 RPVPQLPDAALPLSPELRRPSTVPDQPP 87
P L P++P P P PP
Sbjct: 361 PPPSVL--GVGPVAPPPPPPPPPPPGPP 386
Score = 35.8 bits (81), Expect = 0.065
Identities = 27/90 (30%), Positives = 33/90 (36%), Gaps = 7/90 (7%)
Query: 11 PPPSTGRGR----PPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLP 66
PPP R PP P + PP P PP + G + PPP P P P
Sbjct: 323 PPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPP-P 381
Query: 67 DAALPLSPELRRPSTVPDQPPATDNRRSRM 96
P P L PS Q P T ++ +
Sbjct: 382 PPGPPPPPGL--PSDGDHQVPTTAGNKAAL 409
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 46.6 bits (109), Expect = 4e-05
Identities = 81/324 (25%), Positives = 102/324 (31%), Gaps = 99/324 (30%)
Query: 4 SLTPRLTPPPSTGRGRPPQPGKARP-PSSSGDQRRHPQLS--RPPRRDLTGGSDLGPPPR 60
S +P TPP S G P+ G RP P+ + P L P + P +
Sbjct: 533 SRSPARTPPASLYHGYLPENGVLRPEPTKQPPYQLRPSLFVLSPIKEPAKVSPRAASPAK 592
Query: 61 P-----VPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCG--AHRPLAPP 113
P VP LP ALP SP L RP SR +P L T G + +P A
Sbjct: 593 PSSLDLVPNLPKGALPPSPALPRP--------------SRSSPGLYTSPGQDSLQPTAVS 638
Query: 114 PGRAANRSRQRQSTPHRPANWRPYALD-DTISPSFAWC-SAEAASRDWAVPETTDAASQS 171
P PY D +SPS AW A+ A R +Q
Sbjct: 639 P---------------------PYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQD 677
Query: 172 RFRSCRASPRRCERCLTSDVSRLAFHGGSPPNPKAPGRQALQPEARRPMGATSAWLDQWK 231
R S SP P PG A RP + W+
Sbjct: 678 RRESLPTSP-----------------------PWTPG-------ASRPPSSLDGWVSPGP 707
Query: 232 RRKGGTSLLTGWLGTPPPPP------------------PRVPPLGLQRLAARGVLVCLER 273
G S ++ PPPPP R P LQ L AR ++ R
Sbjct: 708 WEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRPETEARPPSRQLQALLARNIINAARR 767
Query: 274 WPFCGVCDRDQGGAKSPGVWGVPR 297
GA++P + PR
Sbjct: 768 ----KSASPRSAGAENPRPFSPPR 787
Score = 30.8 bits (68), Expect = 2.1
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 11/80 (13%)
Query: 7 PRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLP 66
PR PP R PP P PP + R PQ +RP + G + P P+P P
Sbjct: 780 PRPFSPP---RAPPPPP----PPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRSPLPAGP 832
Query: 67 DAALPLSPELRRPSTVPDQP 86
+ SP R P P +P
Sbjct: 833 SSC--TSP--RSPLPAPPRP 848
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 46.6 bits (109), Expect = 4e-05
Identities = 44/125 (35%), Positives = 53/125 (42%), Gaps = 32/125 (25%)
Query: 11 PPPSTGRGRPPQPGKARPPSSSGDQRRHPQLS-RPPRRDLTGGSDLGPPPRPVPQLPDAA 69
PPP +G PPQPG G QR+ P L RPP + S LGPP A
Sbjct: 461 PPP---QGGPPQPGP-------GPQRQGPPLQQRPPPQGQQHLSGLGPP---------AG 501
Query: 70 LPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGR------AANRSRQ 123
PL L P++ P QP S+ AP RP+A PG A+ S Q
Sbjct: 502 SPLPQRLPSPTSAPQQPA------SQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQ 555
Query: 124 RQSTP 128
RQ+ P
Sbjct: 556 RQAGP 560
Score = 35.0 bits (79), Expect = 0.11
Identities = 38/130 (29%), Positives = 49/130 (37%), Gaps = 35/130 (26%)
Query: 2 ATSLTPRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRP 61
A S P+ P P++ P QP P + G R+ SRP + GG P RP
Sbjct: 500 AGSPLPQRLPSPTSA---PQQPASQAAPPTQGQGRQ----SRP----VAGGPGAPPAARP 548
Query: 62 VPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANRS 121
P SP +R + PP + S PA GA PPG
Sbjct: 549 ---------PASPSPQRQA----GPPQATRQTSVSGPAPPKASGA------PPG-----G 584
Query: 122 RQRQSTPHRP 131
+QRQ P +P
Sbjct: 585 QQRQGPPQKP 594
Score = 32.0 bits (71), Expect = 0.94
Identities = 30/102 (29%), Positives = 35/102 (34%), Gaps = 19/102 (18%)
Query: 7 PRLTPPPSTGRGRP----------PQPGKARPPSSSGDQRRHPQLSRP-PRRDLTGGSDL 55
P +P P G P P P KA G QR+ P P P S
Sbjct: 548 PPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQA 607
Query: 56 GPPPR--------PVPQLPDAALPLSPELRRPSTVPDQPPAT 89
GP PR P P P A P+L + + PPAT
Sbjct: 608 GPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPAT 649
Score = 30.8 bits (68), Expect = 2.1
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 8/65 (12%)
Query: 10 TPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPDAA 69
T PP+T + RP PG A P PQL++ P +D+ + P PQL +
Sbjct: 613 TGPPTTQQPRPSGPGPAGRPK--------PQLAQKPSQDVPPPATAAAGGPPHPQLKASP 664
Query: 70 LPLSP 74
P
Sbjct: 665 AQAQP 669
Score = 30.0 bits (66), Expect = 3.6
Identities = 24/74 (32%), Positives = 28/74 (37%), Gaps = 10/74 (13%)
Query: 2 ATSLTPRLTPPPSTGRGRPP-----QPGKARPPSSSGDQRRHPQL-----SRPPRRDLTG 51
AT T P P G PP Q +PP +G R+ Q + PP
Sbjct: 563 ATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPR 622
Query: 52 GSDLGPPPRPVPQL 65
S GP RP PQL
Sbjct: 623 PSGPGPAGRPKPQL 636
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 46.2 bits (108), Expect = 5e-05
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 18/125 (14%)
Query: 7 PRLTPPPSTGRGRPP--QPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQ 64
P PP G +PP QPG A+PPS + P ++PP + P +P PQ
Sbjct: 476 PAKPPPQQPGPAKPPPQQPGSAKPPS------QQPGSTKPPPQQ-------PGPAKPSPQ 522
Query: 65 LPDAALPLSPELRRPSTVPDQP-PATDNRRSRMAPALSTVCGAHRPLAPPPGRAANRSRQ 123
P + P S + QP PA + + P T G+ +PL PP + +
Sbjct: 523 QPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQT--GSGKPLQPPTVSPSAKQPP 580
Query: 124 RQSTP 128
Q P
Sbjct: 581 SQGLP 585
Score = 35.4 bits (80), Expect = 0.085
Identities = 37/139 (26%), Positives = 53/139 (38%), Gaps = 21/139 (15%)
Query: 9 LTPPPSTGRGRPPQPGKARPPSSS-GDQR---RHPQLSRPPRRDLTGGSDLGPPPRPVPQ 64
L PP G+ QPG A+PP+ G + + P L P + GP PV Q
Sbjct: 391 LAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAP-------GPTKTPVQQ 443
Query: 65 LPDAALPLSP----ELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANR 120
+P + T P +PP+ ++ P G +P PG A
Sbjct: 444 PGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQP---GPAKPPPQQPGSAKPP 500
Query: 121 SRQRQST---PHRPANWRP 136
S+Q ST P +P +P
Sbjct: 501 SQQPGSTKPPPQQPGPAKP 519
Score = 33.9 bits (76), Expect = 0.25
Identities = 90/358 (25%), Positives = 122/358 (34%), Gaps = 74/358 (20%)
Query: 12 PPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPDAALP 71
P G GR P P S S Q + S+PP TG GP PQ A LP
Sbjct: 220 PKQQGPGRDPLQQDGTPKSISSQQPEKIK-SQPPG---TGKPIQGPTQ--TPQTDHAKLP 273
Query: 72 LSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPL-APPPGRAANRSRQRQSTPHR 130
L + RP T A R + P+L + + P+ P PG+ + + +
Sbjct: 274 LQRDASRPQT----KQADIVRGESVKPSLPS--PSKPPIQQPTPGKPPAQQPGHEKSQPG 327
Query: 131 PANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASPRRCERCLTSD 190
PA +P A ++ A P TT +Q P + T
Sbjct: 328 PA--KPPAQPSGLTKPLAQ-QPGTVKPPVQPPGTTKPPAQP------LGPAKPPAQQT-- 376
Query: 191 VSRLAFHGGSPPNPKAPGRQAL-QPEARRPMGATSAWLDQWKRRKGGTSLLTGWLGTPPP 249
G P+ + PG +AL QP +G T A ++ G T +GTP P
Sbjct: 377 -------GSEKPSSEQPGPKALAQPPG---VGKTPA------QQPGPAKPPTQQVGTPKP 420
Query: 250 PPPRVPPLGLQRLAARGVLVCLERWPFCGVCDRDQGGAKSPGVWGVPRYVGSVRFRANGD 309
LA + L Q AK+PG P V+ G
Sbjct: 421 ------------LAQQPGL---------------QSPAKAPGPTKTP-----VQQPGPGK 448
Query: 310 QKLQDAGESLRRSRTLTAPSPPGSRAAGTAALSAGGPGSQASGGPRPGLAALPPRLPG 367
Q AG + S T P+ P S+ G A PG +PG A P + PG
Sbjct: 449 IPAQQAGPG-KTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPG 505
Score = 30.0 bits (66), Expect = 3.6
Identities = 38/166 (22%), Positives = 56/166 (33%), Gaps = 34/166 (20%)
Query: 3 TSLTPRLTPPPSTGRGRPPQPGKARPPSS-----------------SGDQRRHPQLSRPP 45
+ LT L P T + PG +PP+ S +Q L++PP
Sbjct: 336 SGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPP 395
Query: 46 RRDLTGGSDLGP---------PPRPVPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRM 96
T GP P+P+ Q P P + P+ P Q P ++
Sbjct: 396 GVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSP--AKAPGPTKTPVQQPGPGKIPAQQ 453
Query: 97 APALSTVCGAHRPLAPP---PGRAANRSRQ---RQSTPHRPANWRP 136
A T P PP PG A +Q + P +P + +P
Sbjct: 454 AGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKP 499
Score = 30.0 bits (66), Expect = 3.6
Identities = 61/274 (22%), Positives = 99/274 (36%), Gaps = 54/274 (19%)
Query: 1 MATSLTPRLTPPPSTGRGR----PPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLG 56
M +L L P PS+ + + P A SS Q+ P+ P++DL+ +
Sbjct: 642 MKRALGGDLAPVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPE-- 699
Query: 57 PPPRPVPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGR 116
P +P P + L S PS QPP D+ S+ AP P P
Sbjct: 700 -PKKPPPLVKQPTLHGS-----PSAKAKQPPEADS-LSKPAP----------PKEPSVPS 742
Query: 117 AANRSRQRQSTPHRPANWRPYALDDTISPSFAWCSAEAAS---RDWAVPETTDAASQSRF 173
+++ P +P +P D +S S A + S + A +TT
Sbjct: 743 EQDKAPVADDKPKQPKMVKP--TTDLVSSSSATTKPDIPSSKVQSQAEEKTTPPLKTDSA 800
Query: 174 RSCRASPRRCERCLTSDV---------SRLAFHGGSPPNPKAPGRQALQP-----EARRP 219
+ ++ P E+ D S++ H G P+ ++ G++ + P E ++
Sbjct: 801 KPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPG--PSSESKGQKQVDPVQKKEEPKKA 858
Query: 220 MGATSAWLDQWKRRKGGTSLLTGWLGTPPPPPPR 253
S D K G+P PP PR
Sbjct: 859 QTKMSPKPDAKPMPK----------GSPTPPGPR 882
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 46.2 bits (108), Expect = 5e-05
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 18/125 (14%)
Query: 7 PRLTPPPSTGRGRPP--QPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQ 64
P PP G +PP QPG A+PPS + P ++PP + P +P PQ
Sbjct: 476 PAKPPPQQPGPAKPPPQQPGSAKPPS------QQPGSTKPPPQQ-------PGPAKPSPQ 522
Query: 65 LPDAALPLSPELRRPSTVPDQP-PATDNRRSRMAPALSTVCGAHRPLAPPPGRAANRSRQ 123
P + P S + QP PA + + P T G+ +PL PP + +
Sbjct: 523 QPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQT--GSGKPLQPPTVSPSAKQPP 580
Query: 124 RQSTP 128
Q P
Sbjct: 581 SQGLP 585
Score = 35.4 bits (80), Expect = 0.085
Identities = 37/139 (26%), Positives = 53/139 (38%), Gaps = 21/139 (15%)
Query: 9 LTPPPSTGRGRPPQPGKARPPSSS-GDQR---RHPQLSRPPRRDLTGGSDLGPPPRPVPQ 64
L PP G+ QPG A+PP+ G + + P L P + GP PV Q
Sbjct: 391 LAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAP-------GPTKTPVQQ 443
Query: 65 LPDAALPLSP----ELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANR 120
+P + T P +PP+ ++ P G +P PG A
Sbjct: 444 PGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQP---GPAKPPPQQPGSAKPP 500
Query: 121 SRQRQST---PHRPANWRP 136
S+Q ST P +P +P
Sbjct: 501 SQQPGSTKPPPQQPGPAKP 519
Score = 33.9 bits (76), Expect = 0.25
Identities = 90/358 (25%), Positives = 122/358 (34%), Gaps = 74/358 (20%)
Query: 12 PPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPDAALP 71
P G GR P P S S Q + S+PP TG GP PQ A LP
Sbjct: 220 PKQQGPGRDPLQQDGTPKSISSQQPEKIK-SQPPG---TGKPIQGPTQ--TPQTDHAKLP 273
Query: 72 LSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPL-APPPGRAANRSRQRQSTPHR 130
L + RP T A R + P+L + + P+ P PG+ + + +
Sbjct: 274 LQRDASRPQT----KQADIVRGESVKPSLPS--PSKPPIQQPTPGKPPAQQPGHEKSQPG 327
Query: 131 PANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASPRRCERCLTSD 190
PA +P A ++ A P TT +Q P + T
Sbjct: 328 PA--KPPAQPSGLTKPLAQ-QPGTVKPPVQPPGTTKPPAQP------LGPAKPPAQQT-- 376
Query: 191 VSRLAFHGGSPPNPKAPGRQAL-QPEARRPMGATSAWLDQWKRRKGGTSLLTGWLGTPPP 249
G P+ + PG +AL QP +G T A ++ G T +GTP P
Sbjct: 377 -------GSEKPSSEQPGPKALAQPPG---VGKTPA------QQPGPAKPPTQQVGTPKP 420
Query: 250 PPPRVPPLGLQRLAARGVLVCLERWPFCGVCDRDQGGAKSPGVWGVPRYVGSVRFRANGD 309
LA + L Q AK+PG P V+ G
Sbjct: 421 ------------LAQQPGL---------------QSPAKAPGPTKTP-----VQQPGPGK 448
Query: 310 QKLQDAGESLRRSRTLTAPSPPGSRAAGTAALSAGGPGSQASGGPRPGLAALPPRLPG 367
Q AG + S T P+ P S+ G A PG +PG A P + PG
Sbjct: 449 IPAQQAGPG-KTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPG 505
Score = 30.0 bits (66), Expect = 3.6
Identities = 38/166 (22%), Positives = 56/166 (33%), Gaps = 34/166 (20%)
Query: 3 TSLTPRLTPPPSTGRGRPPQPGKARPPSS-----------------SGDQRRHPQLSRPP 45
+ LT L P T + PG +PP+ S +Q L++PP
Sbjct: 336 SGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPP 395
Query: 46 RRDLTGGSDLGP---------PPRPVPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRM 96
T GP P+P+ Q P P + P+ P Q P ++
Sbjct: 396 GVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSP--AKAPGPTKTPVQQPGPGKIPAQQ 453
Query: 97 APALSTVCGAHRPLAPP---PGRAANRSRQ---RQSTPHRPANWRP 136
A T P PP PG A +Q + P +P + +P
Sbjct: 454 AGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKP 499
Score = 30.0 bits (66), Expect = 3.6
Identities = 61/274 (22%), Positives = 99/274 (36%), Gaps = 54/274 (19%)
Query: 1 MATSLTPRLTPPPSTGRGR----PPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLG 56
M +L L P PS+ + + P A SS Q+ P+ P++DL+ +
Sbjct: 642 MKRALGGDLAPVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPE-- 699
Query: 57 PPPRPVPQLPDAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGR 116
P +P P + L S PS QPP D+ S+ AP P P
Sbjct: 700 -PKKPPPLVKQPTLHGS-----PSAKAKQPPEADS-LSKPAP----------PKEPSVPS 742
Query: 117 AANRSRQRQSTPHRPANWRPYALDDTISPSFAWCSAEAAS---RDWAVPETTDAASQSRF 173
+++ P +P +P D +S S A + S + A +TT
Sbjct: 743 EQDKAPVADDKPKQPKMVKP--TTDLVSSSSATTKPDIPSSKVQSQAEEKTTPPLKTDSA 800
Query: 174 RSCRASPRRCERCLTSDV---------SRLAFHGGSPPNPKAPGRQALQP-----EARRP 219
+ ++ P E+ D S++ H G P+ ++ G++ + P E ++
Sbjct: 801 KPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPG--PSSESKGQKQVDPVQKKEEPKKA 858
Query: 220 MGATSAWLDQWKRRKGGTSLLTGWLGTPPPPPPR 253
S D K G+P PP PR
Sbjct: 859 QTKMSPKPDAKPMPK----------GSPTPPGPR 882
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 45.8 bits (107), Expect = 6e-05
Identities = 67/262 (25%), Positives = 98/262 (37%), Gaps = 53/262 (20%)
Query: 8 RLTPPPSTGRGRP----PQPGKARPPSSSGDQRRH-------PQLSRPPRRDLTGGSD-L 55
+L P PS +P P+ KA + ++ H P S P L +
Sbjct: 198 KLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEPW 257
Query: 56 GPPPRPVPQLPDAALPLSPELRRP----STVPDQP-PATDNRRSRMAPALSTVCGAHRPL 110
GP P P+ +A SPE R+P S P +P PA R APA+S G+ +P
Sbjct: 258 GPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSP--GSWKPG 315
Query: 111 APPPGRAANRSRQRQSTPHRPAN---------WRPYALDDTISP----------SFAWCS 151
P R + S P +PA W+P ++SP S +W S
Sbjct: 316 PPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPI---PSVSPGPWKPTPSVSSASWKS 372
Query: 152 AEAASRDWAVPETTDAASQSRFRSCRASPRRCERCLTSD-------VSRLAFHGGSPPNP 204
+ + W P AS ++S R+ L+ + VS G P +P
Sbjct: 373 SSVSPSSWKSP----PASPESWKSGPPELRKTAPTLSPEHWKAVPPVSPELRKPGPPLSP 428
Query: 205 KAPGRQALQPEARRPMGATSAW 226
+ A PE R+P G+ W
Sbjct: 429 EIRS-PAGSPELRKPSGSPDLW 449
Score = 45.1 bits (105), Expect = 1e-04
Identities = 64/260 (24%), Positives = 93/260 (35%), Gaps = 46/260 (17%)
Query: 20 PPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQL----------PDAA 69
PP P + P +S + + P LS ++ + S P P P+ L P+
Sbjct: 109 PPLPEHQKIPCNSAEPKSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSVVSPELQ 168
Query: 70 LPL-SPELRRPSTV--PDQPPATDNRRS-RMAPALSTVCGAHRPLAPPPGRAANRSRQRQ 125
PL SPE +P++V P+ P + S ++AP S P++P +A + + Q
Sbjct: 169 TPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQ 228
Query: 126 STPHRPANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASPRRCER 185
H P P + SP A A+ W S+ R+ PR+
Sbjct: 229 KQSHFPETLGPPSASSPESPVLA-----ASPEPWGPSPAASPESRKSARTTSPEPRKPS- 282
Query: 186 CLTSDVSRLAFHGGSPPNPKAPGRQALQPEARRPMGATS--AWLD-------QWKRRKGG 236
P P P A+ PE RRP A S +W WK
Sbjct: 283 ------------PSESPEPWKP-FPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSA 329
Query: 237 TSLLTGWLGTPPPPPPRVPP 256
+S W P P P V P
Sbjct: 330 SS--GPW--KPAKPAPSVSP 345
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 45.4 bits (106), Expect = 8e-05
Identities = 32/104 (30%), Positives = 37/104 (35%), Gaps = 5/104 (4%)
Query: 11 PPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPDAAL 70
PPP+ G PP P P + P + PP G G PP P P +
Sbjct: 300 PPPAPPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSP----PSF 355
Query: 71 PLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPP 114
P P+ P P PPA D P GA P PPP
Sbjct: 356 PPHPDFAAPPP-PPPPPAADYPTLPPPPLSQPTGGAPPPPPPPP 398
Score = 43.9 bits (102), Expect = 2e-04
Identities = 31/99 (31%), Positives = 39/99 (39%), Gaps = 8/99 (8%)
Query: 10 TPPPSTGRGRPPQPGKARPPSSSGDQRR-HPQLSRPPRRDLTGGSDLGPPPRPVPQLP-- 66
TPPP + PP P A PP +P L PP TGG+ PPP P P P
Sbjct: 346 TPPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPP 405
Query: 67 -----DAALPLSPELRRPSTVPDQPPATDNRRSRMAPAL 100
D + P L + PA + RS + A+
Sbjct: 406 PFTGADGQPAIPPPLSDTTKPKSSLPAVSDARSDLLSAI 444
Score = 38.1 bits (87), Expect = 0.013
Identities = 34/118 (28%), Positives = 44/118 (37%), Gaps = 21/118 (17%)
Query: 11 PPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPDAAL 70
PPP G G P P PPS HP + PP PPP P P L
Sbjct: 335 PPPPVGFGSPGTPPPPSPPSFPP----HPDFAAPP----------PPPPPPAADYP--TL 378
Query: 71 PLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANRSRQRQSTP 128
P P L +P+ PP P + G +P PPP ++ ++ + S P
Sbjct: 379 P-PPPLSQPTGGAPPPPPPPPPPGPPPPPFTGADG--QPAIPPP--LSDTTKPKSSLP 431
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 44.7 bits (104), Expect = 1e-04
Identities = 72/272 (26%), Positives = 96/272 (35%), Gaps = 47/272 (17%)
Query: 5 LTPRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPP----- 59
L L P S+G G P P S P S P R GPP
Sbjct: 1026 LPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPPSAQSSP 1085
Query: 60 ---RPVPQLP--DAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPP 114
+P LP D A PL P+ R P P PP +R AP RP P
Sbjct: 1086 IDAQPATPLPQKDPAQPLEPK-RPPPPRPVAPP------TRPAPP-------QRPPPPSG 1131
Query: 115 GRAANRSRQRQSTPHRPANWRPYALDDTI-SPSFAWCSAEAASRDWAVPETTDAA----- 168
R+ +R+ P P R + + SP A A P A
Sbjct: 1132 ARSPAPTRKEFGAPKSPGTTRKDNIGRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISA 1191
Query: 169 --SQSRFRSCRASPRRCERCLTSDVSRLAFHGGSPPNPKA--PGRQALQPEARR---PMG 221
S +R + R +P + TS+ S+ + P P+A P + +L P A+R P+
Sbjct: 1192 PQSHARASAGRLTPESQSK--TSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLV 1249
Query: 222 ATSAWLDQWKRRKGGTSLLTGWLGTPPPPPPR 253
+A + Q + L TPP PPPR
Sbjct: 1250 PVAAPMPQSGPQPN--------LETPPQPPPR 1273
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 43.9 bits (102), Expect = 2e-04
Identities = 82/292 (28%), Positives = 104/292 (35%), Gaps = 77/292 (26%)
Query: 20 PPQPG------KARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPDAALPLS 73
P +PG +A+P + S + R P +P R L+ S L P PVP P ++ P
Sbjct: 619 PEKPGTPIVLRRAQPRARSSNDARRPPAPQPAPRTLSHWSALLSP--PVPPRPPSSGP-- 674
Query: 74 PELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAP-------PPGRAANRSRQRQS 126
P PP ++PALS G RP +P PP AA
Sbjct: 675 ---------PPAPP--------LSPALS---GLPRPASPYGSLRRHPPPWAA----PAHV 710
Query: 127 TPHRPANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFR---------SCR 177
P A+W + +SP E A P + SR R S R
Sbjct: 711 PPAPQASWWAFVEPPAVSP-------EVPPDLLAFPGPRPSFRGSRRRGAAFGFPGASPR 763
Query: 178 ASPRRCERCLTSDVSRLAFHGG-------SPPNPK-----APGRQALQPEARRPMGATSA 225
AS RR L S L G +PP+P+ P + P ARRP +
Sbjct: 764 ASRRRAWSPLASPQPSLRSSPGLGYCSPLAPPSPQLSLRTGPFQPPFLPPARRPRSLQES 823
Query: 226 WLDQWKRRKGGTSLLTGWLGTPPP--PPPRVPPLGLQRLAARGVLVCLERWP 275
RR G G G+P P P P PPLGL R L R P
Sbjct: 824 ---PAPRRAAGR---LGPPGSPLPGSPRPPSPPLGLCHSPRRSSLNLPSRLP 869
Score = 35.0 bits (79), Expect = 0.11
Identities = 79/299 (26%), Positives = 107/299 (35%), Gaps = 66/299 (22%)
Query: 5 LTPRLTP-PPSTGRGRPPQP-------GKARPPSSSGDQRRHP-----QLSRPPRRDLTG 51
L+P + P PPS+G PP P G RP S G RRHP PP +
Sbjct: 661 LSPPVPPRPPSSGP--PPAPPLSPALSGLPRPASPYGSLRRHPPPWAAPAHVPPAPQASW 718
Query: 52 GSDLGPP---PRPVPQL---PDAALPLSPELRRPST--VPDQPPATDNRRS--------- 94
+ + PP P P L P RR + P P RR+
Sbjct: 719 WAFVEPPAVSPEVPPDLLAFPGPRPSFRGSRRRGAAFGFPGASPRASRRRAWSPLASPQP 778
Query: 95 --RMAPALSTVCGAHRPLAPPPGRAANRSRQRQSTPHRPANWRPYALDDTISPSFAWCSA 152
R +P L G PLAPP + + R+ Q P P RP +L ++ +P A +
Sbjct: 779 SLRSSPGL----GYCSPLAPPSPQLSLRTGPFQ-PPFLPPARRPRSLQESPAPRRA--AG 831
Query: 153 EAASRDWAVPETTDAASQSRFRSCRASPRRCERCLTSDVSRLAFHGGSPPNPKAPGRQAL 212
+P + S C SPRR L S + PP +A+
Sbjct: 832 RLGPPGSPLPGSPRPPSPP-LGLCH-SPRRSSLNLPSRLPHTWRRLSEPPT------RAV 883
Query: 213 QPEARRPM------GATSAWLDQWKRRKGGTSLLTGWLGTPPP---------PPPRVPP 256
+P+ R P GA A L+ + + T W T PP PP + PP
Sbjct: 884 KPQVRLPFHRPPRAGAWRAPLEHRESPREPEDSETPW--TVPPLAPSWDVDMPPTQRPP 940
Score = 35.0 bits (79), Expect = 0.11
Identities = 64/253 (25%), Positives = 88/253 (34%), Gaps = 38/253 (15%)
Query: 19 RPPQPGKARPPSSSGDQRRHPQLSRPPRR--DLTGGSDLGPPPRPVPQLPDAALPLSPEL 76
RPP+ G R P + R P+ S P L D+ PP Q P + P
Sbjct: 893 RPPRAGAWRAPLEHRESPREPEDSETPWTVPPLAPSWDVDMPPT---QRPPSPWPGGAGS 949
Query: 77 RRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANRSRQRQSTPHRPANWRP 136
RR + P PP +N P L + P P AA+ +R H P P
Sbjct: 950 RRGFSRP--PPVPEN------PFLQLLGPVPSPTLQPEDPAADMTRVFLGRHHEPG---P 998
Query: 137 YALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASPRRCERCLTSDVSRLAF 196
L + P+ EA D +P T + A P+ + D++
Sbjct: 999 GQLTKSAGPTPEKPEEEATLGDPQLPAETKPPTP-------APPK--DVTPPKDIT---- 1045
Query: 197 HGGSPPNPKAPGRQALQPEARRPMGA---TSAWLDQWKRRKGGTSLLTGWLGTPPPPPPR 253
PP P ++ L+P P+ A T A W R GT P P
Sbjct: 1046 ----PPKDVLPEQKTLRPSLSYPLAACDQTRATWPPWHR--WGTLPQAAAPLAPIRAPEP 1099
Query: 254 VPPLGLQRLAARG 266
+P G +R AA G
Sbjct: 1100 LPKGGERRQAAPG 1112
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 43.9 bits (102), Expect = 2e-04
Identities = 31/78 (39%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Query: 6 TPRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQL 65
TPR PPP GRG PP P PP ++G R P PP GG + PPP P P
Sbjct: 355 TPRGPPPP--GRGGPPPP----PPPATG--RSGPLPPPPPG---AGGPPMPPPPPPPPPP 403
Query: 66 PDAALPLSPELRRPSTVP 83
P + +P P+ VP
Sbjct: 404 PSSGNGPAPPPLPPALVP 421
Score = 43.5 bits (101), Expect = 3e-04
Identities = 41/119 (34%), Positives = 49/119 (41%), Gaps = 29/119 (24%)
Query: 9 LTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPDA 68
+ PPP T RG PP PG+ PP PP TG S PPP P P
Sbjct: 349 IAPPPPTPRG-PPPPGRGGPP--------------PPPPPATGRSGPLPPPPPGAGGP-- 391
Query: 69 ALPLSPELRRPSTVPDQPPATDNRRS--RMAPALSTVCGAHRPLAPPPGRAANRSRQRQ 125
P+ P P P PP++ N + + PAL G LAP GR A + RQ
Sbjct: 392 --PMPP----PPPPPPPPPSSGNGPAPPPLPPALVPAGG----LAPGGGRGALLDQIRQ 440
Score = 36.6 bits (83), Expect = 0.038
Identities = 32/98 (32%), Positives = 37/98 (37%), Gaps = 15/98 (15%)
Query: 20 PPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSD--LGP-PPRPVPQLPDAALPLSPEL 76
PP P PPS G+Q L RPP + GG+ GP PP P+ P P P
Sbjct: 314 PPPP----PPSRGGNQ-----LPRPP---IVGGNKGRSGPLPPVPLGIAPPPPTPRGPPP 361
Query: 77 RRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPP 114
P PP R + P G P PPP
Sbjct: 362 PGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPP 399
Score = 35.8 bits (81), Expect = 0.065
Identities = 35/106 (33%), Positives = 39/106 (36%), Gaps = 22/106 (20%)
Query: 9 LTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPDA 68
L PPP RG P RPP G++ R L P + PPP P P+ P
Sbjct: 313 LPPPPPPSRGGNQLP---RPPIVGGNKGRSGPLPPVPL-------GIAPPP-PTPRGP-- 359
Query: 69 ALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPP 114
P R P PPAT R P GA P PPP
Sbjct: 360 -----PPPGRGGPPPPPPPAT----GRSGPLPPPPPGAGGPPMPPP 396
Score = 29.3 bits (64), Expect = 6.1
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Query: 2 ATSLTPRLTPPPSTGRG--RPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGG 52
AT + L PPP G PP P PP SSG+ P L PP GG
Sbjct: 374 ATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPL--PPALVPAGG 424
>gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo
sapiens]
Length = 359
Score = 43.9 bits (102), Expect = 2e-04
Identities = 91/329 (27%), Positives = 121/329 (36%), Gaps = 78/329 (23%)
Query: 8 RLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPD 67
R P R P PG AR + +QR H Q S PP R L S P +
Sbjct: 45 RCRVPSGLRRLADPIPGNARAGVARTEQRDHSQ-SSPPCRRLASYSFWSSAP-----WRE 98
Query: 68 AALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANRSRQRQST 127
LP+SP P+ P P H P PPP Q+
Sbjct: 99 LTLPVSP--ADPAAPPSSP--------------------HAPTRPPP----------QAV 126
Query: 128 PHRPANWRPYALDDTISPSFAWCSAEAASRDWAVPETTDAASQSRFRSCRASPRRCERCL 187
RP+ P + + P +A+ SR A P S+ FRS R P R
Sbjct: 127 QPRPS--EPTPGSEALPPGSLPEAAQPPSRPAAQP-----PSRPAFRSPR--PVRGPHPR 177
Query: 188 TSDVSRLAFHGGSPPNPKAPGRQALQPEARRPMGATSAWLDQWKRRKGGTSLLT------ 241
+ V + F +P A G L+ + RRP A +R +GG L+
Sbjct: 178 RAVVVAVLFGVQAPRRDVAEG--GLRRDGRRPGLAP-------QRGRGGLLLVVLHAATV 228
Query: 242 --GWLGTPPPPPPRVPPLGLQR--LAARGVL--VCLERWP--------FCGVCDRDQGGA 287
LG P PPR P+G+ R +A R L VC+ P C QGGA
Sbjct: 229 QRPRLGRGPSRPPR-GPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGA 287
Query: 288 KSPGVWGVPR-YVGSVRFRANGDQKLQDA 315
P PR ++GS+ ++G +L DA
Sbjct: 288 TLPSSLPAPRLHLGSLLPSSSGGARLGDA 316
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 43.9 bits (102), Expect = 2e-04
Identities = 38/130 (29%), Positives = 49/130 (37%), Gaps = 24/130 (18%)
Query: 7 PRLTPPPSTGRGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLP 66
P+ PPP +G PPQ K+R P S + + P PP+ GG GPP + +
Sbjct: 68 PQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGP----PPQ----GGKPQGPPAQGGSK-- 117
Query: 67 DAALPLSPELRRPSTVPDQPPATDNRRSRMAPALSTVCGAHRPLAPPPGRAANRSRQRQS 126
S R P P PP + + P +P APP G Q Q
Sbjct: 118 ------SQSARSPPGKPQGPPQQEGNNPQ-GPPPPAGGNPQQPQAPPAG-------QPQG 163
Query: 127 TPHRPANWRP 136
P P RP
Sbjct: 164 PPRPPQGGRP 173
Score = 35.8 bits (81), Expect = 0.065
Identities = 33/126 (26%), Positives = 44/126 (34%), Gaps = 27/126 (21%)
Query: 11 PPPSTG---RGRPPQPGKARPPSSSGDQRRHPQLSRPPRRDLTGGSDLGPPPRPVPQLPD 67
P P G +G PP PGK + P G G GPPP PQ P
Sbjct: 39 PSPQGGNKPQGPPPPPGKPQGPPPQG-----------------GNKPQGPPPPGKPQGPP 81
Query: 68 AALPLSPELRRPSTVPDQP--PATDNRRSRMAPALSTVCGAHRPLAPPPGRAANRSRQRQ 125
P + R P + P +P P + + PA + PPG+ +Q
Sbjct: 82 ---PQGDKSRSPRSPPGKPQGPPPQGGKPQGPPAQGG--SKSQSARSPPGKPQGPPQQEG 136
Query: 126 STPHRP 131
+ P P
Sbjct: 137 NNPQGP 142
>gi|20336477 B-cell CLL/lymphoma 7C [Homo sapiens]
Length = 217
Score = 43.5 bits (101), Expect = 3e-04
Identities = 41/118 (34%), Positives = 53/118 (44%), Gaps = 23/118 (19%)
Query: 14 STGRGRPPQPG----KARPPSSSGDQRRHPQLSRPPR----RD---LTGGSDLGPP---- 58
S +G P PG +RP S +G P+ ++PPR RD +T GS PP
Sbjct: 106 SLQKGTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPRLGQERDPGGITAGSTDEPPMLTK 165
Query: 59 PRPVPQLPDAALPLSPELRRPSTVPDQPPAT--DNRRSRMAPALSTVCGAHRPLAPPP 114
PVP+L +A P + + P VP P A D S AP L +C P AP P
Sbjct: 166 EEPVPELLEAEAPEAYPVFEP--VPPVPEAAQGDTEDSEGAPPLKRIC----PNAPDP 217
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,561,985
Number of Sequences: 37866
Number of extensions: 1633410
Number of successful extensions: 21101
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 1099
Number of HSP's that attempted gapping in prelim test: 13834
Number of HSP's gapped (non-prelim): 7196
length of query: 378
length of database: 18,247,518
effective HSP length: 104
effective length of query: 274
effective length of database: 14,309,454
effective search space: 3920790396
effective search space used: 3920790396
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.