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Search of human proteins with 239743834
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743834 PREDICTED: similar to Putative uncharacterized
protein C21orf15 [Homo sapiens]
(109 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239743834 PREDICTED: similar to Putative uncharacterized prot... 225 5e-60
gi|239755934 PREDICTED: hypothetical protein [Homo sapiens] 51 2e-07
gi|239750471 PREDICTED: hypothetical protein [Homo sapiens] 51 2e-07
gi|239744764 PREDICTED: hypothetical protein XP_002343268 [Homo ... 51 2e-07
gi|153792110 HEG homolog 1 [Homo sapiens] 35 0.017
gi|93277115 ataxin 7-like 2 [Homo sapiens] 33 0.049
gi|117938768 GNAS complex locus alex [Homo sapiens] 33 0.064
gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B ... 33 0.064
gi|239757559 PREDICTED: hypothetical protein [Homo sapiens] 32 0.11
gi|239757256 PREDICTED: hypothetical protein XP_002345223 [Homo ... 32 0.11
gi|239751761 PREDICTED: hypothetical protein [Homo sapiens] 32 0.11
gi|239746261 PREDICTED: hypothetical protein XP_002343718 [Homo ... 32 0.11
gi|40254823 SH2 containing inositol phosphatase isoform b [Homo ... 31 0.19
gi|64085167 SH2 containing inositol phosphatase isoform a [Homo ... 31 0.19
gi|46409278 zinc finger protein 474 [Homo sapiens] 30 0.32
gi|224451082 cytospin A [Homo sapiens] 30 0.42
gi|224451080 cytospin A [Homo sapiens] 30 0.42
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 30 0.42
gi|169234663 tumor protein p63 isoform 5 [Homo sapiens] 30 0.54
gi|169234661 tumor protein p63 isoform 4 [Homo sapiens] 30 0.54
gi|169234657 tumor protein p63 isoform 2 [Homo sapiens] 30 0.54
gi|31543818 tumor protein p63 isoform 1 [Homo sapiens] 30 0.54
gi|169207534 PREDICTED: hypothetical protein [Homo sapiens] 30 0.54
gi|24308527 stereocilin [Homo sapiens] 30 0.54
gi|109452617 chromosome 19 open reading frame 34 [Homo sapiens] 30 0.54
gi|150417981 glucocorticoid receptor DNA binding factor 1 [Homo ... 29 0.71
gi|239752069 PREDICTED: hypothetical protein [Homo sapiens] 29 0.71
gi|169201198 PREDICTED: hypothetical protein [Homo sapiens] 29 0.71
gi|239746566 PREDICTED: hypothetical protein XP_002343789 [Homo ... 29 0.71
gi|169188531 PREDICTED: hypothetical protein [Homo sapiens] 29 0.71
>gi|239743834 PREDICTED: similar to Putative uncharacterized protein
C21orf15 [Homo sapiens]
Length = 109
Score = 225 bits (574), Expect = 5e-60
Identities = 109/109 (100%), Positives = 109/109 (100%)
Query: 1 MKHSLGTRAVRSILPDHLTVETSLSHPPGQRPNSLTAGTSLPYPAGQQALPPTPLLPSPM 60
MKHSLGTRAVRSILPDHLTVETSLSHPPGQRPNSLTAGTSLPYPAGQQALPPTPLLPSPM
Sbjct: 1 MKHSLGTRAVRSILPDHLTVETSLSHPPGQRPNSLTAGTSLPYPAGQQALPPTPLLPSPM 60
Query: 61 ITPACERQLVLAVSWFPPLQGFASNKGVAVEAVNCLSVSFFNPCLAFKI 109
ITPACERQLVLAVSWFPPLQGFASNKGVAVEAVNCLSVSFFNPCLAFKI
Sbjct: 61 ITPACERQLVLAVSWFPPLQGFASNKGVAVEAVNCLSVSFFNPCLAFKI 109
>gi|239755934 PREDICTED: hypothetical protein [Homo sapiens]
Length = 133
Score = 51.2 bits (121), Expect = 2e-07
Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 1 MKHSLGTRAVRSILPDHLTVETSLSHPPG---------QRPNSLTAGTSLPYPAGQQALP 51
+KHS RA+R+ LP+ LT+ S Q PN L GTS + Q A+
Sbjct: 7 VKHSTRVRAMRTCLPNRLTLTHSAEKKSKEHHYYILWEQGPNCLIVGTSSQHLPWQHAIL 66
Query: 52 PTPLLPSPMITPACERQLVLAVSWFPPLQGFASNK 86
P PL P PAC++ LA+SW G +K
Sbjct: 67 PRPLPAIPTSIPACKQWWALALSWSSTSAGLPGHK 101
>gi|239750471 PREDICTED: hypothetical protein [Homo sapiens]
Length = 133
Score = 51.2 bits (121), Expect = 2e-07
Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 1 MKHSLGTRAVRSILPDHLTVETSLSHPPG---------QRPNSLTAGTSLPYPAGQQALP 51
+KHS RA+R+ LP+ LT+ S Q PN L GTS + Q A+
Sbjct: 7 VKHSTRVRAMRTCLPNRLTLTHSAEKKSKEHHYYILWEQGPNCLIVGTSSQHLPWQHAIL 66
Query: 52 PTPLLPSPMITPACERQLVLAVSWFPPLQGFASNK 86
P PL P PAC++ LA+SW G +K
Sbjct: 67 PRPLPAIPTSIPACKQWWALALSWSSTSAGLPGHK 101
>gi|239744764 PREDICTED: hypothetical protein XP_002343268 [Homo
sapiens]
Length = 133
Score = 51.2 bits (121), Expect = 2e-07
Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 1 MKHSLGTRAVRSILPDHLTVETSLSHPPG---------QRPNSLTAGTSLPYPAGQQALP 51
+KHS RA+R+ LP+ LT+ S Q PN L GTS + Q A+
Sbjct: 7 VKHSTRVRAMRTCLPNRLTLTHSAEKKSKEHHYYILWEQGPNCLIVGTSSQHLPWQHAIL 66
Query: 52 PTPLLPSPMITPACERQLVLAVSWFPPLQGFASNK 86
P PL P PAC++ LA+SW G +K
Sbjct: 67 PRPLPAIPTSIPACKQWWALALSWSSTSAGLPGHK 101
>gi|153792110 HEG homolog 1 [Homo sapiens]
Length = 1381
Score = 34.7 bits (78), Expect = 0.017
Identities = 26/76 (34%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Query: 7 TRAVRSILPDHLTVETSLSHPPGQRPNSLTAGTSLPYPAGQQALP---PTPLLPSPMITP 63
TRA +L T S P P SLT TS P Q LP TP+LP TP
Sbjct: 695 TRASVHLLKSTSDASTPWSSSPSPLPVSLTTSTSAPLSVSQTTLPQSSSTPVLPRARETP 754
Query: 64 ACERQLVLAVSWFPPL 79
Q S+ L
Sbjct: 755 VTSFQTSTMTSFMTML 770
>gi|93277115 ataxin 7-like 2 [Homo sapiens]
Length = 722
Score = 33.1 bits (74), Expect = 0.049
Identities = 17/57 (29%), Positives = 24/57 (42%)
Query: 9 AVRSILPDHLTVETSLSHPPGQRPNSLTAGTSLPYPAGQQALPPTPLLPSPMITPAC 65
A+ S+L HL+ PP P + + L P + P LP P + PAC
Sbjct: 438 ALSSMLERHLSTHMWKKIPPAAEPPAHLVNSPLSAPLSPSSTGTCPRLPGPTLRPAC 494
>gi|117938768 GNAS complex locus alex [Homo sapiens]
Length = 626
Score = 32.7 bits (73), Expect = 0.064
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 7/43 (16%)
Query: 28 PGQRPNSLTAGTSLPYPAGQQALPP-------TPLLPSPMITP 63
PGQ LT G S P P Q LPP PL P P+ TP
Sbjct: 351 PGQHQPILTPGHSQPIPTPGQPLPPQPIPTPGRPLTPQPIPTP 393
>gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B
subunit [Homo sapiens]
Length = 2339
Score = 32.7 bits (73), Expect = 0.064
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Query: 26 HPPGQ-----RPNSLTAGTSLPYPAGQQALPPTPLLPSPMIT 62
HP G P T+G S P G++ LP TPL P P IT
Sbjct: 2161 HPQGSGSVNGSPLLSTSGASTPGRGGRRQLPQTPLTPRPSIT 2202
>gi|239757559 PREDICTED: hypothetical protein [Homo sapiens]
Length = 196
Score = 32.0 bits (71), Expect = 0.11
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 7 TRAVRSILPDHL-TVETSLSHPPGQRPNSLTAGTSLPYPAGQQAL-PPTPLLPSPM 60
++A + I P L T E L+ PPG S G S P P G L PP P P P+
Sbjct: 132 SQASQLIRPTPLGTRERPLAAPPGNCARSRREGPSRPAPTGAAPLAPPAPHAPPPL 187
>gi|239757256 PREDICTED: hypothetical protein XP_002345223 [Homo
sapiens]
Length = 113
Score = 32.0 bits (71), Expect = 0.11
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 22 TSLSHPPGQRPNSLTAGTSLPYPAGQQALPPTPLLPSP 59
TSL+ PPG + GT LP P+ + P P P P
Sbjct: 61 TSLASPPGSASLDSSPGTELPVPSLASSAPLAPTKPHP 98
>gi|239751761 PREDICTED: hypothetical protein [Homo sapiens]
Length = 113
Score = 32.0 bits (71), Expect = 0.11
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 22 TSLSHPPGQRPNSLTAGTSLPYPAGQQALPPTPLLPSP 59
TSL+ PPG + GT LP P+ + P P P P
Sbjct: 61 TSLASPPGSASLDSSPGTELPVPSLASSAPLAPTKPHP 98
>gi|239746261 PREDICTED: hypothetical protein XP_002343718 [Homo
sapiens]
Length = 113
Score = 32.0 bits (71), Expect = 0.11
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 22 TSLSHPPGQRPNSLTAGTSLPYPAGQQALPPTPLLPSP 59
TSL+ PPG + GT LP P+ + P P P P
Sbjct: 61 TSLASPPGSASLDSSPGTELPVPSLASSAPLAPTKPHP 98
>gi|40254823 SH2 containing inositol phosphatase isoform b [Homo
sapiens]
Length = 1188
Score = 31.2 bits (69), Expect = 0.19
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 11 RSILPDHLTVETSLSHPPGQRPNSLTAGTSLPYPAGQQALPPTPLLPS 58
+++ PD S PP P G S P P GQ + P LPS
Sbjct: 930 QTLSPDQQPTAWSYDQPPKDSPLGPCRGESPPTPPGQPPISPKKFLPS 977
>gi|64085167 SH2 containing inositol phosphatase isoform a [Homo
sapiens]
Length = 1189
Score = 31.2 bits (69), Expect = 0.19
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 11 RSILPDHLTVETSLSHPPGQRPNSLTAGTSLPYPAGQQALPPTPLLPS 58
+++ PD S PP P G S P P GQ + P LPS
Sbjct: 931 QTLSPDQQPTAWSYDQPPKDSPLGPCRGESPPTPPGQPPISPKKFLPS 978
>gi|46409278 zinc finger protein 474 [Homo sapiens]
Length = 364
Score = 30.4 bits (67), Expect = 0.32
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 11 RSILPDHLTVETSLSHPPGQRPNSLTAGTSLPYPAGQQALPPTPLLPSPMITPACERQ 68
R+ LPDHL V P G+ P + + +S ++A TP P +I C ++
Sbjct: 173 RTFLPDHLLVHHRSCKPKGEGPRAPHSNSSDHLTGLKKACSGTPARPRTVICYICGKE 230
>gi|224451082 cytospin A [Homo sapiens]
Length = 1117
Score = 30.0 bits (66), Expect = 0.42
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 34 SLTAGTSLPYPAGQQALPPTPLLPSPMITP 63
S + + +P PA A+P TPL PSPM TP
Sbjct: 847 SFDSASQVPNPAAA-AIPRTPLSPSPMKTP 875
>gi|224451080 cytospin A [Homo sapiens]
Length = 1117
Score = 30.0 bits (66), Expect = 0.42
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 34 SLTAGTSLPYPAGQQALPPTPLLPSPMITP 63
S + + +P PA A+P TPL PSPM TP
Sbjct: 847 SFDSASQVPNPAAA-AIPRTPLSPSPMKTP 875
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 30.0 bits (66), Expect = 0.42
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 37 AGTSLPYPAGQQALPPTPLLPSPMITPACERQLVLAVSWFPPLQGFASNKGVAVEAVN 94
A T + P+ Q + P P+ PSP+ +PA + L LA + P L G + ++ +++ N
Sbjct: 1650 APTPVLAPSSTQTMLPAPV-PSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGN 1706
Score = 26.6 bits (57), Expect = 4.6
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 15 PDHLTVETSLSHPPGQRPNSLTAGTSLPYPAGQQAL----PPTPLLPSPMITPACERQLV 70
P+ + SL P +L + P A Q A+ P PL P P++ P+ V
Sbjct: 1563 PNPAPAQASLLAPASSASQALATPLA-PMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPV 1621
Query: 71 LAVSWFP-PLQGFASNKGVAVEAVN 94
LA S P P+ +S G ++ + +
Sbjct: 1622 LASSQTPVPVMAPSSTPGTSLASAS 1646
>gi|169234663 tumor protein p63 isoform 5 [Homo sapiens]
Length = 461
Score = 29.6 bits (65), Expect = 0.54
Identities = 16/52 (30%), Positives = 20/52 (38%)
Query: 13 ILPDHLTVETSLSHPPGQRPNSLTAGTSLPYPAGQQALPPTPLLPSPMITPA 64
I P T + P G N GT +P L PT LP P+ P+
Sbjct: 388 INPQQRNALTPTTIPDGMGANIPMMGTHMPMAGDMNGLSPTQALPPPLSMPS 439
>gi|169234661 tumor protein p63 isoform 4 [Homo sapiens]
Length = 586
Score = 29.6 bits (65), Expect = 0.54
Identities = 16/52 (30%), Positives = 20/52 (38%)
Query: 13 ILPDHLTVETSLSHPPGQRPNSLTAGTSLPYPAGQQALPPTPLLPSPMITPA 64
I P T + P G N GT +P L PT LP P+ P+
Sbjct: 388 INPQQRNALTPTTIPDGMGANIPMMGTHMPMAGDMNGLSPTQALPPPLSMPS 439
>gi|169234657 tumor protein p63 isoform 2 [Homo sapiens]
Length = 555
Score = 29.6 bits (65), Expect = 0.54
Identities = 16/52 (30%), Positives = 20/52 (38%)
Query: 13 ILPDHLTVETSLSHPPGQRPNSLTAGTSLPYPAGQQALPPTPLLPSPMITPA 64
I P T + P G N GT +P L PT LP P+ P+
Sbjct: 482 INPQQRNALTPTTIPDGMGANIPMMGTHMPMAGDMNGLSPTQALPPPLSMPS 533
>gi|31543818 tumor protein p63 isoform 1 [Homo sapiens]
Length = 680
Score = 29.6 bits (65), Expect = 0.54
Identities = 16/52 (30%), Positives = 20/52 (38%)
Query: 13 ILPDHLTVETSLSHPPGQRPNSLTAGTSLPYPAGQQALPPTPLLPSPMITPA 64
I P T + P G N GT +P L PT LP P+ P+
Sbjct: 482 INPQQRNALTPTTIPDGMGANIPMMGTHMPMAGDMNGLSPTQALPPPLSMPS 533
>gi|169207534 PREDICTED: hypothetical protein [Homo sapiens]
Length = 183
Score = 29.6 bits (65), Expect = 0.54
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 14 LPDHLTVETSLSHPPGQRPNSLTAGTSLPYPAGQQALP--PTPLLPSPMITPACERQLVL 71
+PDHL + + P RP+ A PA +A P P P+ P+P P + +
Sbjct: 58 VPDHLHLSCPRASPDRPRPSCPLASPDRRRPAIPRASPDRPRPISPAPPGPPTSRQPPRI 117
Query: 72 AVSWFPPL 79
+V+ P L
Sbjct: 118 SVAAAPVL 125
>gi|24308527 stereocilin [Homo sapiens]
Length = 1775
Score = 29.6 bits (65), Expect = 0.54
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 18 LTVETSLSHPPGQRPNSLTAGTSLPYPAGQQALPPTPLLPSPMITPACERQLVLAVSWFP 77
+TVE + G P + S+ + Q P TP P P T C+ + AVSW P
Sbjct: 346 ITVEALCENHLGPAPPYSISNFSI-HLLCQHTKPATPQ-PHPSTTAICQTAVWYAVSWAP 403
Query: 78 PLQGF 82
QG+
Sbjct: 404 GAQGW 408
>gi|109452617 chromosome 19 open reading frame 34 [Homo sapiens]
Length = 148
Score = 29.6 bits (65), Expect = 0.54
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 10/62 (16%)
Query: 20 VETSLSHPPGQRPNSLTAGTSLPYPAGQQALPPTPLLPSPMITPACERQLVLAVSWFPPL 79
V+TS S+P +RP+ L SL P + L P+ +C + + FPPL
Sbjct: 87 VDTSASNPSQRRPSRLRGKRSLALPPRLECLFPS----------SCGSRRATSRPGFPPL 136
Query: 80 QG 81
+G
Sbjct: 137 EG 138
>gi|150417981 glucocorticoid receptor DNA binding factor 1 [Homo
sapiens]
Length = 1499
Score = 29.3 bits (64), Expect = 0.71
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 10/51 (19%)
Query: 24 LSHPPGQRPNSLTA-GTSLPY---------PAGQQALPPTPLLPSPMITPA 64
++ PPG RP+S +A +++P+ P+ Q+ PPTP P + P+
Sbjct: 1441 ITEPPGARPSSPSAVASTVPFLTSTPVTSQPSPPQSPPPTPQSPMQPLLPS 1491
>gi|239752069 PREDICTED: hypothetical protein [Homo sapiens]
Length = 216
Score = 29.3 bits (64), Expect = 0.71
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 7 TRAVRSILPDHL-TVETSLSHPPGQRPNSLTAGTSLPYPAGQQAL-----PPTPLLPSP 59
++A + I P L T E L+ PPG S G S P P G +AL P P P P
Sbjct: 132 SQASQLIRPTPLGTRERPLAAPPGNCARSRREGPSRPAPTGARALGAACTPRAPSAPRP 190
>gi|169201198 PREDICTED: hypothetical protein [Homo sapiens]
Length = 105
Score = 29.3 bits (64), Expect = 0.71
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 24 LSHPPGQRPNSLTAGTSLPYPAGQQALPPTPLLPSPMITPACERQ 68
L PPG + S AG + P P+ PTP LP P TP RQ
Sbjct: 33 LEEPPGLQHVSERAGPAAPAPSTH----PTP-LPLPKPTPGASRQ 72
>gi|239746566 PREDICTED: hypothetical protein XP_002343789 [Homo
sapiens]
Length = 216
Score = 29.3 bits (64), Expect = 0.71
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 7 TRAVRSILPDHL-TVETSLSHPPGQRPNSLTAGTSLPYPAGQQAL-----PPTPLLPSP 59
++A + I P L T E L+ PPG S G S P P G +AL P P P P
Sbjct: 132 SQASQLIRPTPLGTRERPLAAPPGNCARSRREGPSRPAPTGARALGAACTPRAPSAPRP 190
>gi|169188531 PREDICTED: hypothetical protein [Homo sapiens]
Length = 105
Score = 29.3 bits (64), Expect = 0.71
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 24 LSHPPGQRPNSLTAGTSLPYPAGQQALPPTPLLPSPMITPACERQ 68
L PPG + S AG + P P+ PTP LP P TP RQ
Sbjct: 33 LEEPPGLQHVSERAGPAAPAPSTH----PTP-LPLPKPTPGASRQ 72
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,192,748
Number of Sequences: 37866
Number of extensions: 281294
Number of successful extensions: 2365
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 2031
Number of HSP's gapped (non-prelim): 464
length of query: 109
length of database: 18,247,518
effective HSP length: 79
effective length of query: 30
effective length of database: 15,256,104
effective search space: 457683120
effective search space used: 457683120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.