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Search of human proteins with 239743256
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743256 PREDICTED: hypothetical protein XP_002342781 [Homo
sapiens]
(142 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239743256 PREDICTED: hypothetical protein XP_002342781 [Homo ... 296 5e-81
gi|239508931 PREDICTED: hypothetical protein [Homo sapiens] 296 5e-81
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 35 0.021
gi|116517292 cut-like 2 [Homo sapiens] 35 0.021
gi|16554449 zonadhesin isoform 3 [Homo sapiens] 34 0.047
gi|27881494 zonadhesin isoform 6 [Homo sapiens] 34 0.047
gi|161019170 mucin 5AC [Homo sapiens] 33 0.079
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 33 0.079
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 33 0.10
gi|116284392 mucin 2 precursor [Homo sapiens] 32 0.14
gi|91982772 mucin 17 [Homo sapiens] 31 0.30
gi|169160951 PREDICTED: hypothetical protein [Homo sapiens] 31 0.39
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 30 0.52
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 30 0.52
gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens] 30 0.52
gi|157785645 SPEG complex locus [Homo sapiens] 30 0.52
gi|41281981 toll-like receptor adaptor molecule 1 [Homo sapiens] 30 0.67
gi|239752529 PREDICTED: similar to mucin [Homo sapiens] 30 0.88
gi|169205253 PREDICTED: hypothetical protein [Homo sapiens] 30 0.88
gi|13654239 WW domain containing E3 ubiquitin protein ligase 1 [... 30 0.88
gi|109150431 ring finger protein 31 [Homo sapiens] 30 0.88
gi|151301154 mucin 6, gastric [Homo sapiens] 30 0.88
gi|119395746 Kallmann syndrome 1 protein precursor [Homo sapiens] 30 0.88
gi|239756839 PREDICTED: hypothetical protein [Homo sapiens] 29 1.1
gi|239753972 PREDICTED: hypothetical protein [Homo sapiens] 29 1.1
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 29 1.1
gi|239751352 PREDICTED: hypothetical protein XP_002347815 [Homo ... 29 1.1
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 29 1.1
gi|239740933 PREDICTED: hypothetical protein XP_002344111 [Homo ... 29 1.1
gi|206597522 ArfGAP with SH3 domain, ankyrin repeat and PH domai... 29 1.1
>gi|239743256 PREDICTED: hypothetical protein XP_002342781 [Homo
sapiens]
Length = 142
Score = 296 bits (757), Expect = 5e-81
Identities = 142/142 (100%), Positives = 142/142 (100%)
Query: 1 MGTESPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLH 60
MGTESPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLH
Sbjct: 1 MGTESPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLH 60
Query: 61 VLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAATPSLLHSQLHHRD 120
VLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAATPSLLHSQLHHRD
Sbjct: 61 VLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAATPSLLHSQLHHRD 120
Query: 121 PAGACHVVSVLECSTHRFRMTE 142
PAGACHVVSVLECSTHRFRMTE
Sbjct: 121 PAGACHVVSVLECSTHRFRMTE 142
>gi|239508931 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 296 bits (757), Expect = 5e-81
Identities = 142/142 (100%), Positives = 142/142 (100%)
Query: 1 MGTESPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLH 60
MGTESPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLH
Sbjct: 1 MGTESPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLH 60
Query: 61 VLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAATPSLLHSQLHHRD 120
VLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAATPSLLHSQLHHRD
Sbjct: 61 VLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAATPSLLHSQLHHRD 120
Query: 121 PAGACHVVSVLECSTHRFRMTE 142
PAGACHVVSVLECSTHRFRMTE
Sbjct: 121 PAGACHVVSVLECSTHRFRMTE 142
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 35.0 bits (79), Expect = 0.021
Identities = 37/122 (30%), Positives = 47/122 (38%), Gaps = 15/122 (12%)
Query: 3 TESPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTP----------AH 52
TE P +S A HS T P + A + SR L + TP A
Sbjct: 193 TEGPRKSVSSA-SEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSAR 251
Query: 53 PLPLRTLHVLQAQ---LASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAATP 109
P H Q + L +LR TP AP +++S SPSAPP +A P
Sbjct: 252 GTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATP-SPSAPPSPSAPP 310
Query: 110 SL 111
SL
Sbjct: 311 SL 312
>gi|116517292 cut-like 2 [Homo sapiens]
Length = 1486
Score = 35.0 bits (79), Expect = 0.021
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 22 PLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRMTHHTPSAPST 81
PLL G G+ P PS + A HP PL ++ SL ++ ++PSA S+
Sbjct: 1348 PLLPG----GSTPDCPSLHPQQESEAGERLHPDPLSFKSASESSRCSLEVSLNSPSAASS 1403
Query: 82 APTRTLVTASTCGCDHSPSAPPQVAATPSLLHSQLHHRDPAGACH 126
+++ S +P +P A P+ + S D AGA H
Sbjct: 1404 --PGLMMSVSPVPSSSAPISPSPPGAPPAKVPSASPTADMAGALH 1446
>gi|16554449 zonadhesin isoform 3 [Homo sapiens]
Length = 2812
Score = 33.9 bits (76), Expect = 0.047
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 14 LCTHSPTWPL--LTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRM 71
+ T PT P LT + +P + + L A+ P HP P T LA+L M
Sbjct: 964 ISTEKPTIPTEKLTIPTEKPTIPTEKPTIPTEKLTALRPPHPSPTAT------GLAALVM 1017
Query: 72 THHTPSAPSTAPTRTLVTASTCGCDHSP 99
+ H PS P T+ T S + P
Sbjct: 1018 SPHAPSTPMTSVILGTTTTSRSSTERCP 1045
>gi|27881494 zonadhesin isoform 6 [Homo sapiens]
Length = 2721
Score = 33.9 bits (76), Expect = 0.047
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 14 LCTHSPTWPL--LTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRM 71
+ T PT P LT + +P + + L A+ P HP P T LA+L M
Sbjct: 964 ISTEKPTIPTEKLTIPTEKPTIPTEKPTIPTEKLTALRPPHPSPTAT------GLAALVM 1017
Query: 72 THHTPSAPSTAPTRTLVTASTCGCDHSP 99
+ H PS P T+ T S + P
Sbjct: 1018 SPHAPSTPMTSVILGTTTTSRSSTERCP 1045
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 33.1 bits (74), Expect = 0.079
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 20/129 (15%)
Query: 3 TESPLSGLSKA----LCTHSPTWPLLTGHQAQG--------ALPHIPSSTSRDLLLAVTP 50
T +P S L A + T + T P +T +A ALP + S+ + +VTP
Sbjct: 2616 TATPTSTLRTAPPPKVLTTTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSVTP 2675
Query: 51 AHPLPLRT--LHVLQAQLASLRMTHHTPSA-PSTAPTRTLV--TASTCGCDHSPSAPPQV 105
L T + Q + M+ TPS+ P TA T T++ TA+T G S + P
Sbjct: 2676 IPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTATATTTGATGSVATP--- 2732
Query: 106 AATPSLLHS 114
++TP H+
Sbjct: 2733 SSTPGTAHT 2741
Score = 32.3 bits (72), Expect = 0.14
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 38 SSTSRDLLLAVTPAH-PLPLRTLHVLQAQLASLRMTHH--TPSA-PSTAPTRTLVTASTC 93
++T + TP+ P + T VL + R T TPS+ P TA T + T +T
Sbjct: 3838 TTTPTATMSTATPSSTPETVHTSTVLTTTTTTTRATGSVATPSSTPGTAHTTKVPTTTTT 3897
Query: 94 GCDHSPSAPPQVAATPSLLHSQLHHRDPAGACHVVSVLECSTH 136
G +PS+ P A TP + S G+ S + +TH
Sbjct: 3898 GFTATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIPGTTH 3940
Score = 32.3 bits (72), Expect = 0.14
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 13/113 (11%)
Query: 5 SPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLHVLQA 64
+P + SKA + SP + LP + S+ ++ +VTP L T L
Sbjct: 4761 TPTATSSKATSSSSP--------RTATTLPVLTSTATKSTATSVTPIPSSTLGTTGTLPE 4812
Query: 65 QL---ASLRMTHHTPSAPSTAPTRTLVT--ASTCGCDHSPSAPPQVAATPSLL 112
Q + T H S P T T T++T A+T S S P T +L
Sbjct: 4813 QTTTPVATMSTIHPSSTPETTHTSTVLTTKATTTRATSSTSTPSSTPGTTWIL 4865
Score = 31.6 bits (70), Expect = 0.23
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 38 SSTSRDLLLAVTPAH-PLPLRTLHVLQAQLASLRMTHH--TPSA-PSTAPTRTLVTASTC 93
++T + TP+ P T VL + R T TPS+ P TA T + T +T
Sbjct: 4340 TTTPTATMSTATPSSTPETAHTSTVLTTTATTTRATGSVATPSSTPGTAHTTKVPTTTTT 4399
Query: 94 GCDHSPSAPPQVAATPSLLHSQLHHRDPAGACHVVSVLECSTH 136
G +PS+ P A TP + S +G+ S + +TH
Sbjct: 4400 GFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTPSSVPGTTH 4442
Score = 30.8 bits (68), Expect = 0.39
Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 13/113 (11%)
Query: 5 SPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLHVLQA 64
+P + SKA + SP + LP + S+ ++ + TP L T L
Sbjct: 3614 TPTATSSKATSSSSP--------RTATTLPVLTSTATKSTATSFTPIPSFTLGTTGTLPE 3665
Query: 65 QLA---SLRMTHHTPSAPSTAPTRTLVT--ASTCGCDHSPSAPPQVAATPSLL 112
Q + T H S P T T T++T A+T S S P T +L
Sbjct: 3666 QTTTPMATMSTIHPSSTPETTHTSTVLTTKATTTRATSSMSTPSSTPGTTWIL 3718
Score = 30.8 bits (68), Expect = 0.39
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 9/113 (7%)
Query: 38 SSTSRDLLLAVTPAH-PLPLRTLHVLQAQLASLRMTHH--TPSA-PSTAPTRTLVTASTC 93
++T + TP+ P + T VL A + T TPS+ P TA T + T +T
Sbjct: 5013 TTTPTATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTT 5072
Query: 94 GCDHSPSAPPQVA-----ATPSLLHSQLHHRDPAGACHVVSVLECSTHRFRMT 141
G +PS+ P A TP S +H H +VL + R T
Sbjct: 5073 GFTATPSSSPGTALTPPTTTPMSTMSTIHTSSTPETTHTSTVLTTTATMTRAT 5125
Score = 30.4 bits (67), Expect = 0.52
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 75 TPSA-PSTAPTRTLVTASTCGCDHSPSAPPQVAATPSLLHSQLHHRDPAGACHVVSVLEC 133
TPS+ P TA T + T +T G +PS+ P A TP + S G+ S +
Sbjct: 2731 TPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIPG 2790
Query: 134 STH 136
+TH
Sbjct: 2791 TTH 2793
Score = 28.5 bits (62), Expect = 2.0
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 75 TPSA-PSTAPTRTLVTASTCGCDHSPSAPPQVA----------ATPSLLHSQLHHRDPAG 123
TPS+ P TA T ++T +T G +PS+ P A TP+ S + G
Sbjct: 3233 TPSSTPGTAHTTKVLTTTTTGFTATPSSSPGTARTLPVWISTTTTPTTRGSTVTPSSIPG 3292
Query: 124 ACHVVSVLECST 135
H +VL +T
Sbjct: 3293 TTHTPTVLTTTT 3304
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 33.1 bits (74), Expect = 0.079
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 20/129 (15%)
Query: 3 TESPLSGLSKA----LCTHSPTWPLLTGHQAQG--------ALPHIPSSTSRDLLLAVTP 50
T +P S L A + T + T P +T +A ALP + S+ + +VTP
Sbjct: 1926 TATPTSTLRTAPPPKVLTTTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSVTP 1985
Query: 51 AHPLPLRT--LHVLQAQLASLRMTHHTPSA-PSTAPTRTLV--TASTCGCDHSPSAPPQV 105
L T + Q + M+ TPS+ P TA T T++ TA+T G S + P
Sbjct: 1986 IPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTATATTTGATGSVATP--- 2042
Query: 106 AATPSLLHS 114
++TP H+
Sbjct: 2043 SSTPGTAHT 2051
Score = 32.3 bits (72), Expect = 0.14
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 38 SSTSRDLLLAVTPAH-PLPLRTLHVLQAQLASLRMTHH--TPSA-PSTAPTRTLVTASTC 93
++T + TP+ P + T VL + R T TPS+ P TA T + T +T
Sbjct: 3258 TTTPTATMSTATPSSTPETVHTSTVLTTTTTTTRATGSVATPSSTPGTAHTTKVPTTTTT 3317
Query: 94 GCDHSPSAPPQVAATPSLLHSQLHHRDPAGACHVVSVLECSTH 136
G +PS+ P A TP + S G+ S + +TH
Sbjct: 3318 GFTATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIPGTTH 3360
Score = 32.3 bits (72), Expect = 0.14
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 13/113 (11%)
Query: 5 SPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLHVLQA 64
+P + SKA + SP + LP + S+ ++ +VTP L T L
Sbjct: 4291 TPTATSSKATSSSSP--------RTATTLPVLTSTATKSTATSVTPIPSSTLGTTGTLPE 4342
Query: 65 QL---ASLRMTHHTPSAPSTAPTRTLVT--ASTCGCDHSPSAPPQVAATPSLL 112
Q + T H S P T T T++T A+T S S P T +L
Sbjct: 4343 QTTTPVATMSTIHPSSTPETTHTSTVLTTKATTTRATSSTSTPSSTPGTTWIL 4395
Score = 32.3 bits (72), Expect = 0.14
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 13/113 (11%)
Query: 5 SPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLHVLQA 64
+P + SKA + SP + LP + S+ ++ + TP L T + A
Sbjct: 4718 TPAATSSKATSSSSP--------RTATTLPVLTSTATKSTATSFTPIPSSTLWTTWTVPA 4769
Query: 65 QLA---SLRMTHHTPSAPSTAPTRTLV--TASTCGCDHSPSAPPQVAATPSLL 112
Q S T HT S P T T T++ TA+ +S + P T +L
Sbjct: 4770 QTTTPMSTMSTIHTSSTPETTHTSTVLTTTATMTRATNSTATPSSTLGTTRIL 4822
Score = 31.6 bits (70), Expect = 0.23
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 38 SSTSRDLLLAVTPAH-PLPLRTLHVLQAQLASLRMTHH--TPSA-PSTAPTRTLVTASTC 93
++T + TP+ P T VL + R T TPS+ P TA T + T +T
Sbjct: 3815 TTTPTATMSTATPSSTPETAHTSTVLTTTATTTRATGSVATPSSTPGTAHTTKVPTTTTT 3874
Query: 94 GCDHSPSAPPQVAATPSLLHSQLHHRDPAGACHVVSVLECSTH 136
G +PS+ P A TP + S +G+ S + +TH
Sbjct: 3875 GFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTPSSVPGTTH 3917
Score = 30.8 bits (68), Expect = 0.39
Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 13/113 (11%)
Query: 5 SPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLHVLQA 64
+P + SKA + SP + LP + S+ ++ + TP L T L
Sbjct: 3034 TPTATSSKATSSSSP--------RTATTLPVLTSTATKSTATSFTPIPSFTLGTTGTLPE 3085
Query: 65 QLA---SLRMTHHTPSAPSTAPTRTLVT--ASTCGCDHSPSAPPQVAATPSLL 112
Q + T H S P T T T++T A+T S S P T +L
Sbjct: 3086 QTTTPMATMSTIHPSSTPETTHTSTVLTTKATTTRATSSMSTPSSTPGTTWIL 3138
Score = 30.4 bits (67), Expect = 0.52
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 75 TPSA-PSTAPTRTLVTASTCGCDHSPSAPPQVAATPSLLHSQLHHRDPAGACHVVSVLEC 133
TPS+ P TA T + T +T G +PS+ P A TP + S G+ S +
Sbjct: 2041 TPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIPG 2100
Query: 134 STH 136
+TH
Sbjct: 2101 TTH 2103
Score = 30.0 bits (66), Expect = 0.67
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 38 SSTSRDLLLAVTPAH-PLPLRTLHVLQAQLASLRMTHH--TPSA-PSTAPTRTLVTASTC 93
++T + TP+ P + T VL A + T TPS+ P TA T + T +T
Sbjct: 4543 TTTPTATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTT 4602
Query: 94 GCDHSPSAPPQVAATP 109
G +PS+ P A TP
Sbjct: 4603 GFTATPSSSPGTALTP 4618
Score = 28.5 bits (62), Expect = 2.0
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 75 TPSA-PSTAPTRTLVTASTCGCDHSPSAPPQVA----------ATPSLLHSQLHHRDPAG 123
TPS+ P TA T ++T +T G +PS+ P A TP+ S + G
Sbjct: 2598 TPSSTPGTAHTTKVLTTTTTGFTATPSSSPGTARTLPVWISTTTTPTTRGSTVTPSSIPG 2657
Query: 124 ACHVVSVLECST 135
H +VL +T
Sbjct: 2658 TTHTPTVLTTTT 2669
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 32.7 bits (73), Expect = 0.10
Identities = 37/126 (29%), Positives = 44/126 (34%), Gaps = 20/126 (15%)
Query: 3 TESPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTP----------AH 52
TE P +S A HS T P + A + SR L + TP A
Sbjct: 202 TEGPRKSVSSA-SEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSAR 260
Query: 53 PLPLRTLHVLQAQ---LASLRMTHHTPSAPSTAP------TRTLVTASTCGCDHSPSAPP 103
P H Q + L +LR TP AP + L T S G P PP
Sbjct: 261 GTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPP 320
Query: 104 QVAATP 109
AATP
Sbjct: 321 DNAATP 326
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 32.3 bits (72), Expect = 0.14
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Query: 16 THSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRMTHHT 75
T SP P T P P++T+ + T P P T S T T
Sbjct: 1640 TPSPP-PTTTTTPPPTTTPSPPTTTTPSPPITTTTTPP-PTTTPSSPITTTPSPPTTTMT 1697
Query: 76 PSAPSTAPTRTLVTASTCGCDHSPSAPPQVAATPS 110
+P+T P+ + T +T +PS PP TPS
Sbjct: 1698 TPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPS 1732
Score = 30.4 bits (67), Expect = 0.52
Identities = 27/107 (25%), Positives = 37/107 (34%), Gaps = 10/107 (9%)
Query: 3 TESPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLHVL 62
T SP + T + T P T P P +++ L TP+ P T
Sbjct: 1476 TPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPP 1535
Query: 63 QAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAATP 109
TPS P+T P + +T +PS PP TP
Sbjct: 1536 TT----------TPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTP 1572
Score = 28.9 bits (63), Expect = 1.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 75 TPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAATP 109
TPS P+T P + +T +PS PP TP
Sbjct: 1617 TPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTP 1651
Score = 28.5 bits (62), Expect = 2.0
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 6/112 (5%)
Query: 2 GTESPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLHV 61
GT++P + T +PT P TG Q G H ++ +L + P +T
Sbjct: 4169 GTQTPTTTPITTTTTVTPT-PTPTGTQT-GPPTHTSTAPIAELTTSNPPPESSTPQTSRS 4226
Query: 62 LQAQLA-SLRMTHHTPSA---PSTAPTRTLVTASTCGCDHSPSAPPQVAATP 109
+ L S + P A STAP T +T H+ S PP +P
Sbjct: 4227 TSSPLTESTTLLSTLPPAIEMTSTAPPSTPTAPTTTSGGHTLSPPPSTTTSP 4278
Score = 26.2 bits (56), Expect = 9.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 75 TPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAATP 109
TPS P+T P+ + +T +PS P TP
Sbjct: 1398 TPSPPTTTPSPPPTSTTTLPPTTTPSPPTTTTTTP 1432
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 31.2 bits (69), Expect = 0.30
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 36 IPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGC 95
+P+ST + TP +P+ T V+ ++ ++L T S P T T + +T
Sbjct: 1091 MPTSTYSE---GSTPLTSVPVSTRLVVSSEASTLSTTPVDTSIPVTTSTEASSSPTTAEG 1147
Query: 96 DHSPSAPPQVAATP 109
P++PP TP
Sbjct: 1148 TSIPTSPPSEGTTP 1161
Score = 30.8 bits (68), Expect = 0.39
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 36 IPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGC 95
+P+ST + TP +P+ T+ V+ ++ ++ T S P T T + +T
Sbjct: 2387 MPTSTYSE---GSTPLTSVPVSTMPVVSSEASTHSTTPVDTSTPVTTSTEASSSPTTAEG 2443
Query: 96 DHSPSAPPQVAATP 109
P++PP TP
Sbjct: 2444 TSIPTSPPSEGTTP 2457
Score = 30.0 bits (66), Expect = 0.67
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 36 IPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGC 95
+P+ST + TP +P+ T V ++ ++L T S P T T + +T
Sbjct: 678 MPTSTYTE---GSTPLTSMPVNTTLVASSEASTLSTTPVDTSTPVTTSTEASSSPTTADG 734
Query: 96 DHSPSAPPQVAATP--SLLHSQLHHRDPAGACHVVSVLECSTHRFRMTE 142
P++ P +TP S+ S+ + + L+ STH TE
Sbjct: 735 ASMPTSTPSEGSTPLTSMPVSKTLLTSSEASTLSTTPLDTSTHITTSTE 783
Score = 30.0 bits (66), Expect = 0.67
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 49 TPAHPLPLRTLHVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAAT 108
TP +PL T V+ ++ ++L T S P+T T + +T G ++ P T
Sbjct: 1985 TPLTSMPLSTTLVVSSEASTLSTTPVDTSTPATTSTEGSSSPTTAGGTSIQTSTPSERTT 2044
Query: 109 P 109
P
Sbjct: 2045 P 2045
Score = 28.9 bits (63), Expect = 1.5
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 22 PLLTGHQAQGALP-----HIPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRMTHHTP 76
P+ T QA + P +P+ST + TP + T V+ ++ ++L T
Sbjct: 3311 PVTTYSQASSSPPIADGTSMPTSTYSE---GSTPLTNMSFSTTPVVSSEASTLSTTPVDT 3367
Query: 77 SAPSTAPTRTLVTASTCGCDHSPSAPPQVAATP 109
S P T T ++ +T P++ P TP
Sbjct: 3368 STPVTTSTEASLSPTTAEGTSIPTSSPSEGTTP 3400
Score = 28.1 bits (61), Expect = 2.6
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 36 IPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGC 95
+P+ST + TP +P+ T VL ++ ++L T S P T T + +T
Sbjct: 1739 MPNSTPSE---GTTPLTSIPVSTTPVLSSEASTLSATPIDTSTPVTTSTEATSSPTTAEG 1795
Query: 96 DHSPSAPPQVAATP 109
P++ TP
Sbjct: 1796 TSIPTSTLSEGMTP 1809
Score = 28.1 bits (61), Expect = 2.6
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 36 IPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGC 95
+P+ST+ + TP +PL T V ++ ++L T S P T + T + +T
Sbjct: 3448 LPTSTTSE---GSTPLSIMPLSTTPVASSEASTLSTTPVDTSTPVTTSSPTNSSPTTAEV 3504
Query: 96 DHSPSAPPQVAATP 109
P++ +TP
Sbjct: 3505 TSMPTSTAGEGSTP 3518
Score = 27.7 bits (60), Expect = 3.3
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 49 TPAHPLPLRTLHVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAAT 108
TP +P+ T V + +++L T S P T T + +T P++ P +T
Sbjct: 2161 TPLTSMPVSTTVVASSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPSEGST 2220
Query: 109 P 109
P
Sbjct: 2221 P 2221
Score = 27.7 bits (60), Expect = 3.3
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 49 TPAHPLPLRTLHVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAAT 108
TP +P+ T V + +++L T S P T T + +T P++ P +T
Sbjct: 3105 TPLTGVPVSTTPVTSSAISTLSTTPVDTSTPVTTSTEAHSSPTTSEGTSMPTSTPSEGST 3164
Query: 109 P 109
P
Sbjct: 3165 P 3165
Score = 27.3 bits (59), Expect = 4.4
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 36 IPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGC 95
+P+ST + TP +P T V+ ++ +L T S P T T + +T
Sbjct: 914 MPTSTPGE---GSTPLTSMPDSTTPVVSSEARTLSATPVDTSTPVTTSTEATSSPTTAEG 970
Query: 96 DHSPSAPPQVAATP 109
P++ P TP
Sbjct: 971 TSIPTSTPSEGTTP 984
Score = 27.3 bits (59), Expect = 4.4
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 22 PLLTGHQAQGALP-----HIPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRMTHHTP 76
PL T +A P +P+ST + TP +P+ T V ++ ++L T
Sbjct: 1013 PLTTSTEASSPPPTAEGTSMPTSTPSE---GSTPLTRMPVSTTMVASSETSTLSTTPADT 1069
Query: 77 SAPSTAPTRTLVTASTCGCDHSPSAPPQVAATP 109
S P T ++ +++T P++ +TP
Sbjct: 1070 STPVTTYSQASSSSTTADGTSMPTSTYSEGSTP 1102
Score = 27.3 bits (59), Expect = 4.4
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 49 TPAHPLPLRTLHVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAAT 108
TP +P+ T V+ ++ ++L T S P T + +T P++ P T
Sbjct: 1396 TPLTSIPVSTTPVVSSEASTLSATPVDTSTPGTTSAEATSSPTTAEGISIPTSTPSEGKT 1455
Query: 109 P 109
P
Sbjct: 1456 P 1456
Score = 27.3 bits (59), Expect = 4.4
Identities = 16/61 (26%), Positives = 26/61 (42%)
Query: 49 TPAHPLPLRTLHVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAAT 108
TP + +RT V + +++L T S P T T + +T P++ P T
Sbjct: 1690 TPLTSITVRTTPVASSAISTLSTTPVDNSTPVTTSTEARSSPTTSEGTSMPNSTPSEGTT 1749
Query: 109 P 109
P
Sbjct: 1750 P 1750
Score = 26.9 bits (58), Expect = 5.7
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 49 TPAHPLPLRTLHVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAAT 108
TP +P+ T V + ++ L T S P T T + +T P++ P T
Sbjct: 1337 TPLTSIPVNTTLVASSAISILSTTPVDNSTPVTTSTEACSSPTTSEGTSMPNSNPSEGTT 1396
Query: 109 P 109
P
Sbjct: 1397 P 1397
Score = 26.9 bits (58), Expect = 5.7
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 36 IPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGC 95
+P+ST + TP +P+ T+ V+ ++ ++L T S P T T + +T
Sbjct: 2210 MPTSTPSE---GSTPFTSMPVSTMPVVTSEASTLSATPVDTSTPVTTSTEATSSPTTAEG 2266
Query: 96 DHSPSAPPQVAATP 109
P++ TP
Sbjct: 2267 TSIPTSTLSEGTTP 2280
Score = 26.6 bits (57), Expect = 7.4
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 49 TPAHPLPLRTLHVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAAT 108
TP +P+ T V + +++L T S P T T + +T P++ P +T
Sbjct: 865 TPLTSMPVSTTLVATSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPGEGST 924
Query: 109 P 109
P
Sbjct: 925 P 925
Score = 26.6 bits (57), Expect = 7.4
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 36 IPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGC 95
+P+ST + TP +P+ T+ V+ ++ ++L T S P T T T T+ST
Sbjct: 3154 MPTSTPSE---GSTPLTYMPVSTMLVVSSEDSTLSATPVDTSTPVT--TSTEATSSTTAE 3208
Query: 96 DHS-PSAPPQVAATP 109
S P++ P TP
Sbjct: 3209 GTSIPTSTPSEGMTP 3223
>gi|169160951 PREDICTED: hypothetical protein [Homo sapiens]
Length = 109
Score = 30.8 bits (68), Expect = 0.39
Identities = 18/67 (26%), Positives = 27/67 (40%)
Query: 29 AQGALPHIPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRMTHHTPSAPSTAPTRTLV 88
++ LP +P + L A + + LQ L SL H +PSA +
Sbjct: 27 SKAKLPSLPLPVTHHFLAAALVSGAAAVLQCETLQEPLPSLPTAHQSPSALKGQQPCLSL 86
Query: 89 TASTCGC 95
S+CGC
Sbjct: 87 PGSSCGC 93
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 30.4 bits (67), Expect = 0.52
Identities = 36/143 (25%), Positives = 54/143 (37%), Gaps = 25/143 (17%)
Query: 17 HSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHP----LPLRTLHVLQAQLASLR-- 70
H PT P L H PH+P+ + P HP P+ + Q++LA +
Sbjct: 8 HLPTHPHLPTHPHLPTHPHLPTHPHLPTHPHL-PTHPHLPTHPMMSKETRQSKLAEAKEQ 66
Query: 71 -MTHHTPSAPS--TAPTRTL----------VTASTCGCDHSPSAPPQVAATPSLLHSQLH 117
HH + PS TA + T T ++ GC HSP + S H +
Sbjct: 67 LTDHHPQTNPSVGTAASDTKKKKINNGTNPETTTSGGC-HSPEDEQKA----SHQHQEAL 121
Query: 118 HRDPAGACHVVSVLECSTHRFRM 140
R+ H + +L C +M
Sbjct: 122 RRELEAQVHTIRILTCQKTELQM 144
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 30.4 bits (67), Expect = 0.52
Identities = 36/143 (25%), Positives = 54/143 (37%), Gaps = 25/143 (17%)
Query: 17 HSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHP----LPLRTLHVLQAQLASLR-- 70
H PT P L H PH+P+ + P HP P+ + Q++LA +
Sbjct: 8 HLPTHPHLPTHPHLPTHPHLPTHPHLPTHPHL-PTHPHLPTHPMMSKETRQSKLAEAKEQ 66
Query: 71 -MTHHTPSAPS--TAPTRTL----------VTASTCGCDHSPSAPPQVAATPSLLHSQLH 117
HH + PS TA + T T ++ GC HSP + S H +
Sbjct: 67 LTDHHPQTNPSVGTAASDTKKKKINNGTNPETTTSGGC-HSPEDEQKA----SHQHQEAL 121
Query: 118 HRDPAGACHVVSVLECSTHRFRM 140
R+ H + +L C +M
Sbjct: 122 RRELEAQVHTIRILTCQKTELQM 144
>gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 295
Score = 30.4 bits (67), Expect = 0.52
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Query: 66 LASLRMTHHTPSAPSTA---PTRTLVTASTCGCDHSPSAPPQVAATPSLLHSQLHHRD-- 120
LA+ ++HHTP+ P+ A P G P PPQ+ A LH HHR
Sbjct: 12 LAAHFLSHHTPAKPTCAGLLPHLHYFAPRRRGFLPPPPPPPQLFARRGFLHP--HHRSFL 69
Query: 121 -PAGACH 126
PA A +
Sbjct: 70 PPAAAAY 76
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 30.4 bits (67), Expect = 0.52
Identities = 33/94 (35%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Query: 4 ESPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLHVLQ 63
+SP S L+ L +PT P +T + P P S + L AV P P R LQ
Sbjct: 2798 DSPTS-LAPPLAPAAPTPPSVT---VSPSSPPTPPSQALSSLKAVGPPPQTPPRRHRGLQ 2853
Query: 64 AQL---ASLRMTHHTPSAPS--TAPTRTLVTAST 92
A +L TH TPS P T T + AST
Sbjct: 2854 AARPAEPTLPSTHVTPSEPKPFVLDTGTPIPAST 2887
>gi|41281981 toll-like receptor adaptor molecule 1 [Homo sapiens]
Length = 712
Score = 30.0 bits (66), Expect = 0.67
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 8/103 (7%)
Query: 3 TESPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLP---LRTL 59
T SP S S + SPT P L+ H++ PH PS D ++ P P+P
Sbjct: 197 TGSPASLASNLEISQSPTMPFLSLHRS----PHGPSKLCDDPQASLVP-EPVPGGCQEPE 251
Query: 60 HVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAP 102
+ + PS+P A++ G +P+AP
Sbjct: 252 EMSWPPSGEIASPPELPSSPPPGLPEVAPDATSTGLPDTPAAP 294
>gi|239752529 PREDICTED: similar to mucin [Homo sapiens]
Length = 594
Score = 29.6 bits (65), Expect = 0.88
Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 2/114 (1%)
Query: 3 TESPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLHVL 62
T S S ++ T T L + G H S + + + +H P T +
Sbjct: 305 TPSFTSLITTIEATSHSTPSLTSSITTTGTTSHSTPSFTYLTTITESTSHSTPSLTSAIT 364
Query: 63 QAQLASLRMTHHTPS--APSTAPTRTLVTASTCGCDHSPSAPPQVAATPSLLHS 114
+ S + TPS +PST +L+ + +PS P + T S HS
Sbjct: 365 TTETMSHSILGFTPSIISPSTPSYISLIATTETPSHSTPSFPSSITTTQSASHS 418
>gi|169205253 PREDICTED: hypothetical protein [Homo sapiens]
Length = 3859
Score = 29.6 bits (65), Expect = 0.88
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 34 PHIPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRMTHH----TPSAPSTAPTRTLVT 89
P IP +T+ DL++ VTPA L V A+ ++ +T P P+ P + +
Sbjct: 516 PFIPVTTADDLIVPVTPADS---PVLSVTPAESPAIPVTPADSPIVPVTPANGPVVPVTS 572
Query: 90 ASTCGCDHSPSAPPQVAATPS 110
A + P+ P V TP+
Sbjct: 573 ADSPFVPVIPADGPVVPVTPA 593
>gi|13654239 WW domain containing E3 ubiquitin protein ligase 1
[Homo sapiens]
Length = 922
Score = 29.6 bits (65), Expect = 0.88
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 83 PTRTLVTASTCGC----DHSPSAPPQVAATP 109
PT TLV S C D++PS+P QVAA P
Sbjct: 194 PTSTLVQNSCCSYVVNGDNTPSSPSQVAARP 224
>gi|109150431 ring finger protein 31 [Homo sapiens]
Length = 1072
Score = 29.6 bits (65), Expect = 0.88
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 52 HPLPLRTLHVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAA 107
H P R H+ Q L+ TH +PS P++A R T+ D S S+P +A
Sbjct: 245 HGHPSRAHHLRQTLPGVLQGTHLSPSLPASAQPRPQSTSLLALGDSSLSSPNPASA 300
Score = 27.3 bits (59), Expect = 4.4
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 14/105 (13%)
Query: 27 HQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRMTHHTPSAPSTAPTRT 86
H Q AL + D +L ++ PL LR ++A +T TPS P + P
Sbjct: 168 HPRQQALEQLLEDKVEDDMLQLSEFDPL-LR-------EIAPGPLT--TPSVPGSTPGPC 217
Query: 87 LVTASTCGCDHSPSAPPQVAATPSLLHSQLHHRDPAGACHVVSVL 131
+ S G H PS + A P+ H L H P+ A H+ L
Sbjct: 218 FLCGSAPGTLHCPSC--KQALCPACDH--LFHGHPSRAHHLRQTL 258
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 29.6 bits (65), Expect = 0.88
Identities = 38/118 (32%), Positives = 46/118 (38%), Gaps = 23/118 (19%)
Query: 5 SPLSGLSKALCTH---SPTWPLLTGHQAQGALP-HIPS-STSRDLLLAVTPAHPLPLRTL 59
SP S T + T+P T Q LP H+P STS VTP+ + T
Sbjct: 1976 SPFSSTGPMTATSFQTTTTYP--TPSHPQTTLPTHVPPFSTS-----LVTPSTHTVIITT 2028
Query: 60 HVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAATPSLLHSQLH 117
H A AS+ H TP+ PT T ST +APP T SQ H
Sbjct: 2029 HTQMATSASI---HSTPTGTVPPPTTLKATGST------HTAPPMTVTTSGT--SQTH 2075
Score = 28.1 bits (61), Expect = 2.6
Identities = 33/117 (28%), Positives = 43/117 (36%), Gaps = 17/117 (14%)
Query: 2 GTESPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPS-STSRDLLLAVTPAHPLPLRTLH 60
G+ P +G A H+ T H H+P STS VTP+ + H
Sbjct: 1413 GSPVPSTGPVTATSFHATTTYPTPSHPETTLPTHVPPFSTS-----LVTPSTHTVITPTH 1467
Query: 61 VLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAATPSLLHSQLH 117
AQ+A+ H P+ PT T ST +APP T SQ H
Sbjct: 1468 ---AQMATSASNHSAPTGTIPPPTTLKATGST------HTAPPITPTTSGT--SQAH 1513
Score = 26.6 bits (57), Expect = 7.4
Identities = 30/105 (28%), Positives = 39/105 (37%), Gaps = 10/105 (9%)
Query: 3 TESPLSGLSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDL----LLAVTPAHPLPLRT 58
T SP + S A T T L T G P +P ST+++L T P P T
Sbjct: 1312 TASPAT-TSTAQSTTRTTMTLPTP-ATSGTSPTLPKSTNQELPGTTATQTTGPRPTPAST 1369
Query: 59 LHVLQAQLASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPP 103
Q P+A T TRT +T H+ +PP
Sbjct: 1370 TGPTTPQPGQPTR----PTATETTQTRTTTEYTTPQTPHTTHSPP 1410
>gi|119395746 Kallmann syndrome 1 protein precursor [Homo sapiens]
Length = 680
Score = 29.6 bits (65), Expect = 0.88
Identities = 26/103 (25%), Positives = 38/103 (36%), Gaps = 14/103 (13%)
Query: 20 TWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRMTHHTPSAP 79
TW +T Q +LP+ S S+ + P+ L ++ + L L + TP
Sbjct: 588 TWAEVTTESRQNSLPNSIISQSQ-----ILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGE 642
Query: 80 STAPTRTLVTASTCGCDHSPSAPPQVAATPSLLHSQLHHRDPA 122
A +T T P PP A L H HH P+
Sbjct: 643 GPATIKTFRT---------PELPPSSAHRSHLKHRHPHHYKPS 676
>gi|239756839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 743
Score = 29.3 bits (64), Expect = 1.1
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 60 HVLQAQL--ASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAATPSLLHSQLH 117
HVL+ Q+ A+ +T H P AP + + G +AP +LH LH
Sbjct: 648 HVLRRQVEGAAAGLTPHVPPVLGAAPQQPVALIRPDG----HAAPVLAGVLEGVLHQHLH 703
Query: 118 HR 119
HR
Sbjct: 704 HR 705
>gi|239753972 PREDICTED: hypothetical protein [Homo sapiens]
Length = 298
Score = 29.3 bits (64), Expect = 1.1
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 74 HTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAATPSLLHSQLH 117
H P PST P L+ ST H P+ PP + +HS +H
Sbjct: 186 HPPIHPSTHP---LIHPSTHTSTHPPTHPPTHPPSNPSIHSSIH 226
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 29.3 bits (64), Expect = 1.1
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Query: 10 LSKALCTHSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASL 69
L +A P+ LT ++ +L PS S + + A +P R ASL
Sbjct: 107 LPRASLMRRPSTASLTRSPSRASLTTTPSRASLSMTPSTAAALTMPSRASLTRTPPRASL 166
Query: 70 RMTHHTPSAPSTAP-TRTLVTASTCGCDHSPSAPPQVAATPSL 111
MT PSTA TRT AS G S ++P + +T SL
Sbjct: 167 TMT------PSTASLTRTPPRASPTGMP-SRTSPTGMPSTASL 202
>gi|239751352 PREDICTED: hypothetical protein XP_002347815 [Homo
sapiens]
Length = 697
Score = 29.3 bits (64), Expect = 1.1
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 60 HVLQAQL--ASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAATPSLLHSQLH 117
HVL+ Q+ A+ +T H P AP + + G +AP +LH LH
Sbjct: 602 HVLRRQVEGAAAGLTPHVPPVLGAAPQQPVALIRPDG----HAAPVLAGVLEGVLHQHLH 657
Query: 118 HR 119
HR
Sbjct: 658 HR 659
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 29.3 bits (64), Expect = 1.1
Identities = 29/136 (21%), Positives = 44/136 (32%), Gaps = 23/136 (16%)
Query: 17 HSPTWPLLTGHQAQGALPHIPSSTSRDLLLAVTPAHPLPLRTLHVLQAQLASLRMTHHTP 76
H PT P L H PH+P+ P HP+ + + A ++T H P
Sbjct: 8 HLPTHPHLPTHPHLPTHPHLPTHPH-------LPTHPMMSKETRQSKLAEAKEQLTDHHP 60
Query: 77 SAPSTAPTRTLVT------------ASTCGCDHSPSAPPQVAATPSLLHSQLHHRDPAGA 124
+ T T +T G HSP + S H + R+
Sbjct: 61 QTNPSVGTAASDTKKKKINNGTNPETTTSGGCHSPEDEQKA----SHQHQEALRRELEAQ 116
Query: 125 CHVVSVLECSTHRFRM 140
+ +L C +M
Sbjct: 117 VQTIRILTCQKTELQM 132
>gi|239740933 PREDICTED: hypothetical protein XP_002344111 [Homo
sapiens]
Length = 697
Score = 29.3 bits (64), Expect = 1.1
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 60 HVLQAQL--ASLRMTHHTPSAPSTAPTRTLVTASTCGCDHSPSAPPQVAATPSLLHSQLH 117
HVL+ Q+ A+ +T H P AP + + G +AP +LH LH
Sbjct: 602 HVLRRQVEGAAAGLTPHVPPVLGAAPQQPVALIRPDG----HAAPVLAGVLEGVLHQHLH 657
Query: 118 HR 119
HR
Sbjct: 658 HR 659
>gi|206597522 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
isoform b [Homo sapiens]
Length = 961
Score = 29.3 bits (64), Expect = 1.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 76 PSAPSTAPTRTLVTASTCGCDHSPSAPPQVAATPSLLHSQLHHRDPA 122
P+APST L + +P+ PP VA TPS++ + PA
Sbjct: 776 PAAPSTTSAPPLPPRNVGKDPLTPTPPPPVAKTPSVMEALSQPSKPA 822
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.127 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,504,040
Number of Sequences: 37866
Number of extensions: 310423
Number of successful extensions: 1749
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 1542
Number of HSP's gapped (non-prelim): 278
length of query: 142
length of database: 18,247,518
effective HSP length: 92
effective length of query: 50
effective length of database: 14,763,846
effective search space: 738192300
effective search space used: 738192300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.