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Search of human proteins with 239742946
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742946 PREDICTED: hypothetical protein [Homo sapiens]
(435 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754370 PREDICTED: hypothetical protein [Homo sapiens] 896 0.0
gi|239748924 PREDICTED: hypothetical protein [Homo sapiens] 896 0.0
gi|239742946 PREDICTED: hypothetical protein [Homo sapiens] 896 0.0
gi|110832843 TBP-associated factor 4 [Homo sapiens] 57 3e-08
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 56 6e-08
gi|163965366 nascent polypeptide-associated complex alpha subuni... 54 4e-07
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 52 1e-06
gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo ... 49 7e-06
gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo ... 49 7e-06
gi|239756937 PREDICTED: hypothetical protein [Homo sapiens] 49 9e-06
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 48 2e-05
gi|239755232 PREDICTED: hypothetical protein [Homo sapiens] 48 2e-05
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 47 3e-05
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 47 3e-05
gi|239749768 PREDICTED: hypothetical protein [Homo sapiens] 47 3e-05
gi|239744027 PREDICTED: hypothetical protein XP_002343007 [Homo ... 47 3e-05
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 47 3e-05
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 47 3e-05
gi|145309320 forkhead box Q1 [Homo sapiens] 47 4e-05
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 47 4e-05
gi|18079216 CASK interacting protein 1 [Homo sapiens] 46 6e-05
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 46 6e-05
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 46 8e-05
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 46 8e-05
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|169163019 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 45 1e-04
gi|71274152 hypothetical protein LOC388939 [Homo sapiens] 45 1e-04
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 45 2e-04
>gi|239754370 PREDICTED: hypothetical protein [Homo sapiens]
Length = 435
Score = 896 bits (2315), Expect = 0.0
Identities = 435/435 (100%), Positives = 435/435 (100%)
Query: 1 MPESPKAKISAVKERESEPKKMSTPTPTGPCLKLSCLPANPAPSFREAAMANVALGLRRI 60
MPESPKAKISAVKERESEPKKMSTPTPTGPCLKLSCLPANPAPSFREAAMANVALGLRRI
Sbjct: 1 MPESPKAKISAVKERESEPKKMSTPTPTGPCLKLSCLPANPAPSFREAAMANVALGLRRI 60
Query: 61 KKKRRRERAGRKAGGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQKRSPT 120
KKKRRRERAGRKAGGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQKRSPT
Sbjct: 61 KKKRRRERAGRKAGGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQKRSPT 120
Query: 121 PARYKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPP 180
PARYKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPP
Sbjct: 121 PARYKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPP 180
Query: 181 CPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKD 240
CPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKD
Sbjct: 181 CPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKD 240
Query: 241 AARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPA 300
AARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPA
Sbjct: 241 AARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPA 300
Query: 301 RTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLNLPFIP 360
RTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLNLPFIP
Sbjct: 301 RTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLNLPFIP 360
Query: 361 GPGGRARPRWSFTAGAPEPPKRVPAQAVGAHGRCRRLFWWRLRVPGPVTPGSPRAACPGH 420
GPGGRARPRWSFTAGAPEPPKRVPAQAVGAHGRCRRLFWWRLRVPGPVTPGSPRAACPGH
Sbjct: 361 GPGGRARPRWSFTAGAPEPPKRVPAQAVGAHGRCRRLFWWRLRVPGPVTPGSPRAACPGH 420
Query: 421 HSEQHNSRVAETTKM 435
HSEQHNSRVAETTKM
Sbjct: 421 HSEQHNSRVAETTKM 435
>gi|239748924 PREDICTED: hypothetical protein [Homo sapiens]
Length = 435
Score = 896 bits (2315), Expect = 0.0
Identities = 435/435 (100%), Positives = 435/435 (100%)
Query: 1 MPESPKAKISAVKERESEPKKMSTPTPTGPCLKLSCLPANPAPSFREAAMANVALGLRRI 60
MPESPKAKISAVKERESEPKKMSTPTPTGPCLKLSCLPANPAPSFREAAMANVALGLRRI
Sbjct: 1 MPESPKAKISAVKERESEPKKMSTPTPTGPCLKLSCLPANPAPSFREAAMANVALGLRRI 60
Query: 61 KKKRRRERAGRKAGGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQKRSPT 120
KKKRRRERAGRKAGGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQKRSPT
Sbjct: 61 KKKRRRERAGRKAGGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQKRSPT 120
Query: 121 PARYKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPP 180
PARYKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPP
Sbjct: 121 PARYKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPP 180
Query: 181 CPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKD 240
CPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKD
Sbjct: 181 CPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKD 240
Query: 241 AARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPA 300
AARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPA
Sbjct: 241 AARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPA 300
Query: 301 RTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLNLPFIP 360
RTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLNLPFIP
Sbjct: 301 RTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLNLPFIP 360
Query: 361 GPGGRARPRWSFTAGAPEPPKRVPAQAVGAHGRCRRLFWWRLRVPGPVTPGSPRAACPGH 420
GPGGRARPRWSFTAGAPEPPKRVPAQAVGAHGRCRRLFWWRLRVPGPVTPGSPRAACPGH
Sbjct: 361 GPGGRARPRWSFTAGAPEPPKRVPAQAVGAHGRCRRLFWWRLRVPGPVTPGSPRAACPGH 420
Query: 421 HSEQHNSRVAETTKM 435
HSEQHNSRVAETTKM
Sbjct: 421 HSEQHNSRVAETTKM 435
>gi|239742946 PREDICTED: hypothetical protein [Homo sapiens]
Length = 435
Score = 896 bits (2315), Expect = 0.0
Identities = 435/435 (100%), Positives = 435/435 (100%)
Query: 1 MPESPKAKISAVKERESEPKKMSTPTPTGPCLKLSCLPANPAPSFREAAMANVALGLRRI 60
MPESPKAKISAVKERESEPKKMSTPTPTGPCLKLSCLPANPAPSFREAAMANVALGLRRI
Sbjct: 1 MPESPKAKISAVKERESEPKKMSTPTPTGPCLKLSCLPANPAPSFREAAMANVALGLRRI 60
Query: 61 KKKRRRERAGRKAGGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQKRSPT 120
KKKRRRERAGRKAGGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQKRSPT
Sbjct: 61 KKKRRRERAGRKAGGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQKRSPT 120
Query: 121 PARYKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPP 180
PARYKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPP
Sbjct: 121 PARYKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPP 180
Query: 181 CPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKD 240
CPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKD
Sbjct: 181 CPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKD 240
Query: 241 AARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPA 300
AARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPA
Sbjct: 241 AARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPA 300
Query: 301 RTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLNLPFIP 360
RTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLNLPFIP
Sbjct: 301 RTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLNLPFIP 360
Query: 361 GPGGRARPRWSFTAGAPEPPKRVPAQAVGAHGRCRRLFWWRLRVPGPVTPGSPRAACPGH 420
GPGGRARPRWSFTAGAPEPPKRVPAQAVGAHGRCRRLFWWRLRVPGPVTPGSPRAACPGH
Sbjct: 361 GPGGRARPRWSFTAGAPEPPKRVPAQAVGAHGRCRRLFWWRLRVPGPVTPGSPRAACPGH 420
Query: 421 HSEQHNSRVAETTKM 435
HSEQHNSRVAETTKM
Sbjct: 421 HSEQHNSRVAETTKM 435
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 57.0 bits (136), Expect = 3e-08
Identities = 95/309 (30%), Positives = 106/309 (34%), Gaps = 76/309 (24%)
Query: 139 PSGGAAPCVPDEPAPAARTRRRD--------PSLRRTLAPCAPAWPA----PPP------ 180
P+ GA P EP PA R R PS RR L P PA PA PPP
Sbjct: 78 PAEGAPGAAP-EPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGS 136
Query: 181 C--------------PAPPSRSKP----ALAARQQPQRRAWAAAVATQCPHRAPTQQHRA 222
C PAP +KP ALAAR P P + P A
Sbjct: 137 CAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGK-PAGPGAA 195
Query: 223 GRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLPRGA------QSSPLPGARASSFLPA 276
+GS +N A L N L LP+ A Q+ P GA A A
Sbjct: 196 QTLNGSAALLNSHHAAAPAV-SLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAA 254
Query: 277 PQ---HGAPLDVAHVPDSGPRAASAPARTPGHARTRAAAGPAAYLRGLMVASLAWVRRHA 333
P AP A P P A + AR PGH AGP + + A A
Sbjct: 255 PSPPAAPAPAAPAAAPPPPPPAPATLARPPGH-----PAGPPTAAPAVPPPAAAQNGGSA 309
Query: 334 HTCPPPLPAASLAAGAERARLNLPFIPGPGGRARPRWSFTAGAP----EPPKRV------ 383
P P PAA AG PGPG A A AP E PKRV
Sbjct: 310 GAAPAPAPAAGGPAGVSGQ-------PGPGAAA------AAPAPGVKAESPKRVVQAAPP 356
Query: 384 PAQAVGAHG 392
AQ + A G
Sbjct: 357 AAQTLAASG 365
Score = 44.7 bits (104), Expect = 2e-04
Identities = 74/263 (28%), Positives = 97/263 (36%), Gaps = 61/263 (23%)
Query: 140 SGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPAPPSRSKPALAARQQPQ 199
+ G A +P A T + P AP APA P+PP PAP + PA A P
Sbjct: 219 NNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAP---AAPAAAPPPPPP 275
Query: 200 RRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLPRG 259
A A R P H AG + AA +P P
Sbjct: 276 APATLA--------RPP--GHPAGPPT--------------AAPAVPP---------PAA 302
Query: 260 AQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPA-------------RTPGHA 306
AQ+ GA + PAP G P V+ P G AA+APA P A
Sbjct: 303 AQNGGSAGAAPA---PAPAAGGPAGVSGQPGPG-AAAAAPAPGVKAESPKRVVQAAPPAA 358
Query: 307 RTRAAAGPAAYLRGLMVA-SLAWVRRHAHTCPPPLPAASL-----AAGAERARLN-LPFI 359
+T AA+GPA+ +++ ++ PPP P AAGA L+ P
Sbjct: 359 QTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTA 418
Query: 360 PGPGGRARPRWSFTA-GAPEPPK 381
G RA + A P+PP+
Sbjct: 419 TTSGIRATLTPTVLAPRLPQPPQ 441
Score = 40.0 bits (92), Expect = 0.004
Identities = 86/315 (27%), Positives = 106/315 (33%), Gaps = 64/315 (20%)
Query: 109 LVNHLAQKRSPTPARYKAVRLAEREREVRTPSGGAAP--CVPDEPAPAARTRRRDPSLRR 166
LV L + + + A + LA R EVR + GA V PA AA
Sbjct: 25 LVGSLESQLAASAAHHH--HLAPRTPEVRAAAAGALGNHVVSGSPAGAAGA--------- 73
Query: 167 TLAPCAPAWPAPPPCPAPP--SRSKPALAARQQ-----PQRRAWAAAVATQCPHRAPTQQ 219
P APA AP P PP R++P Q+ P+R A A P +
Sbjct: 74 --GPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPE 131
Query: 220 HRAG--RESGSTGAINQGRRRKDAARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAP 277
AG + A+ G A P G P PG P P
Sbjct: 132 GSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPG-------PGP 184
Query: 278 QHGAPLDVAHVPDSGPRAA-----SAPARTPGHARTRAAA----GPAAYL-------RGL 321
G P +GP AA SA HA A + GPAA L G
Sbjct: 185 GPGKP--------AGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGT 236
Query: 322 MVASLAWVRRHAHTCPPPLPAA----SLAAGAERARLNLPFIPGPGGRARPRWSFTAGAP 377
++ + +V A PP PAA + A A A P P P ARP AG P
Sbjct: 237 VIQTPPFVGAAA----PPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPP-GHPAGPP 291
Query: 378 EPPKRVPAQAVGAHG 392
VP A +G
Sbjct: 292 TAAPAVPPPAAAQNG 306
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 56.2 bits (134), Expect = 6e-08
Identities = 66/226 (29%), Positives = 80/226 (35%), Gaps = 34/226 (15%)
Query: 94 RPARRANCPDSFR-RVLVNHLAQKRSPTPARYKAVRLAEREREVRTPSGGAAPCVPDEPA 152
R RR + P+ R R + L Q+R+ YK V+ P GA P PA
Sbjct: 56 RMVRRRHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATP-----PA 110
Query: 153 PAARTRRRDPSLRRTLAPCAPAWPAPPPCPAPPSRSKPALAARQQPQRRAWAAAVATQCP 212
P R AP A A APPP PAPP P AA RA AAA AT P
Sbjct: 111 PPRAPRG---------APAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRA-AAAAATAPP 160
Query: 213 HRAPTQQHRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLPRGAQSSPLP--GARA 270
P Q + + A A ++ P G + +P P AR
Sbjct: 161 SPGPAQPGPRAQRAAPLAAPPPAPAAPPA------------VAPPAGPRRAPPPAVAARE 208
Query: 271 SSFLPAPQHGAPLDVAHVPDSGPRAASAPARTPGHARTRAAAGPAA 316
P PQ AP P P+ P G R AA P +
Sbjct: 209 PPLPPPPQPPAPPQQQQPPPPQPQ----PPPEGGAVRAGGAARPVS 250
Score = 50.8 bits (120), Expect = 2e-06
Identities = 45/158 (28%), Positives = 60/158 (37%), Gaps = 10/158 (6%)
Query: 119 PTPARYKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAP 178
P+P + A+R + P AP P AP A RR P +A P P P
Sbjct: 160 PSPGPAQPGPRAQRAAPLAAPP--PAPAAPPAVAPPAGPRRAPPP---AVAAREPPLPPP 214
Query: 179 PPCPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGR-- 236
P PAPP + +P Q P A P G G+ G + +GR
Sbjct: 215 PQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGGRLTRGRVQ 274
Query: 237 ---RRKDAARRLPNRNLLRDLSLPRGAQSSPLPGARAS 271
+ AAR R L L+LPRG + P A ++
Sbjct: 275 GLLEEEAAARGRLERTRLGALALPRGDRPGRAPPAASA 312
Score = 31.6 bits (70), Expect = 1.5
Identities = 53/224 (23%), Positives = 71/224 (31%), Gaps = 28/224 (12%)
Query: 173 PAWPAPPPCPAPPSRSKPALAARQQPQRRAWAA-AVATQCPHRAPTQQHRAGRESGSTGA 231
PA P PP A + + A ++ P + W + + +A R R
Sbjct: 5 PALP-PPETAAAATTAAAASSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRRRHG 63
Query: 232 INQGRRRKDAARRLPNRNLLR-----DLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVA 286
R R + + + R +LR +S A+ P P+ GA
Sbjct: 64 PEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQP------------PRRGA---TP 108
Query: 287 HVPDSGPRAASAPARTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLA 346
P PR A A A T A P A + A A T PP A
Sbjct: 109 PAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPG 168
Query: 347 AGAERARLNLPFIPGPGGRARPRWSFTAGAPEPPKRVPAQAVGA 390
A+RA P P A P P P+R P AV A
Sbjct: 169 PRAQRA---APLAAPPPAPAAPP---AVAPPAGPRRAPPPAVAA 206
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 53.5 bits (127), Expect = 4e-07
Identities = 66/258 (25%), Positives = 84/258 (32%), Gaps = 37/258 (14%)
Query: 138 TPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPAPPS-RSKPALAARQ 196
TP AP P P+ + PSL+ P A P+P PA PS + P A
Sbjct: 1050 TPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAAT 1109
Query: 197 QPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSL 256
P + A PH+ A S G
Sbjct: 1110 PPSPKGGLATP----PHKGAPTTPAATPPSPKGGLATPP--------------------- 1144
Query: 257 PRGAQSSP--LPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPARTPGHARTRAAAGP 314
P+GA ++P P + P GAP A P S + P +P A T AA P
Sbjct: 1145 PKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATP--SPKGAPTTPAATP 1202
Query: 315 AAYLRGLMVASLAWVRRHAHTCP---PPLPAASLAAGAERARLNLPFIPGPGGRARPRWS 371
+ GL S + A T P PP P LA + + P P + P
Sbjct: 1203 PSPKGGLATPS----PKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATP 1258
Query: 372 FTAGAPEPPKRVPAQAVG 389
GAP PP P G
Sbjct: 1259 PPKGAPTPPAATPPSLKG 1276
Score = 53.5 bits (127), Expect = 4e-07
Identities = 78/287 (27%), Positives = 101/287 (35%), Gaps = 25/287 (8%)
Query: 138 TPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPPCP-----APPSRSKPAL 192
TPS AP P P+ + PS + AP PA A PP P PP + P
Sbjct: 1073 TPSLKGAPTPPAATPPSPKGGPATPSPKG--APMPPA--ATPPSPKGGLATPPHKGAPTT 1128
Query: 193 AARQQPQRRAWAAAVATQCPHRAPTQQHRA--GRESGSTGAINQGRRRKDAARRLPNRNL 250
A P + +AT P APT + G +G AA +
Sbjct: 1129 PAATPPSPKG---GLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGG 1185
Query: 251 LRDLSLPRGAQSSPL---PGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPARTPGHAR 307
L S P+GA ++P P + P+P+ GAP A P S + P+ P A
Sbjct: 1186 LATPS-PKGAPTTPAATPPSPKGGLATPSPK-GAPTTPAATPPSPKGGLATPS--PKGAP 1241
Query: 308 TRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLNLPFIPGPGGRAR 367
T AA P + G PP L LA + N + P +
Sbjct: 1242 TTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGG-LATPPHKGAPNPAVVTPPSPKGG 1300
Query: 368 PRWSFTAGAPEPPKRVPAQAVGAHGRCRRLFWWRLRVPGPVTPGSPR 414
P S GAP PP P G+ G P VTP SP+
Sbjct: 1301 PATSPPKGAPTPPAATPPSPKGSPGTPPPK---GAPTPPAVTPPSPK 1344
Score = 52.0 bits (123), Expect = 1e-06
Identities = 80/298 (26%), Positives = 99/298 (33%), Gaps = 30/298 (10%)
Query: 138 TPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPPCP-----APPSRSKPAL 192
TPS AP P P+ + P + AP PA A PP P PP + P
Sbjct: 1096 TPSPKGAPMPPAATPPSPKGGLATPPHKG--APTTPA--ATPPSPKGGLATPPPKGAPTT 1151
Query: 193 AARQQPQRRAWAAAVATQCPHRAPTQQHRA--GRESGSTGAINQGRRRKDAARRLPNRNL 250
A P + +AT P APT + G +G AA +
Sbjct: 1152 PAATPPSPKG---GLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGG 1208
Query: 251 LRDLSLPRGAQSSPL---PGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPARTPGHAR 307
L S P+GA ++P P + P+P+ GAP A P S + P P A
Sbjct: 1209 LATPS-PKGAPTTPAATPPSPKGGLATPSPK-GAPTTPAATPPSPKGGPATPP--PKGAP 1264
Query: 308 TRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLNLPFIPGPGGRAR 367
T AA P + GL A PP P A + P P +
Sbjct: 1265 TPPAATPPSLKGGLATPPHKGAPNPA-VVTPPSPKGGPATSPPKGAPTPPAATPPSPKGS 1323
Query: 368 PRWSFTAGAPEPPKRVPAQAVGAHGRCRRLFWWRLRVPGPVTPGS-----PRAACPGH 420
P GAP PP P G GP TP S P AA P H
Sbjct: 1324 PGTPPPKGAPTPPAVTPPSPKGTPTLPATT---PSSKGGPTTPSSKEGPTPPAATPSH 1378
Score = 50.1 bits (118), Expect = 4e-06
Identities = 86/338 (25%), Positives = 115/338 (34%), Gaps = 52/338 (15%)
Query: 109 LVNHLAQKRSP-TPARYKAVRLA------EREREVRTPSG-GAAPCVPDEPAPAARTRRR 160
+VN K P TPA +A L+ ++ R P G A+P P P A T
Sbjct: 890 VVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAAT--- 946
Query: 161 DPSLRRTLAPCAPAWPAPPPCPAPPS----------RSKPALAARQQPQRRAWAAAVATQ 210
PS + A +P W PP PPS + P A P + A + +
Sbjct: 947 PPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPK 1006
Query: 211 CPHRAPTQQHRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLPRGAQSSP---LPG 267
P + + S + +G AA + LP+GA ++P LP
Sbjct: 1007 GAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPS 1066
Query: 268 ARASSFLPAPQHGAPLDVAHVPDSGPRAASAPARTPGHARTRAAAGPAAYLRGLMVASLA 327
+ P+ + GAP A P S + P +P A AA P + GL
Sbjct: 1067 PKGGPATPSLK-GAPTPPAATPPSPKGGPATP--SPKGAPMPPAATPPSPKGGLATPP-- 1121
Query: 328 WVRRHAHTCP---PPLPAASLAAGAERARLNLPFIPGP---GGRARPRWSFTAGAPEPPK 381
+ A T P PP P LA + P P GG A P GAP P
Sbjct: 1122 --HKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPP---PKGAPTTPA 1176
Query: 382 RVPAQAVGAHGRCRRLFWWRLRVPGPV-TPGSPRAACP 418
P G L P P P +P A P
Sbjct: 1177 ATPPSPKGG-----------LATPSPKGAPTTPAATPP 1203
Score = 44.7 bits (104), Expect = 2e-04
Identities = 105/424 (24%), Positives = 136/424 (32%), Gaps = 84/424 (19%)
Query: 41 PAPSFREAAMANVALGLRRIKKKRRRER-AGRKAGGDFRDLSL--PLARSLPPESRRPAR 97
P P + A+ LG+ + + AG + G SL P + P ES PA
Sbjct: 598 PLPIGKPASSMTSPLGVNSSASVIKTDSYAGPDSAGPLLKSSLITPTVAAFPLESADPAG 657
Query: 98 RANCPDSFRRVLVNHLAQKRSPTPARYKAVRLAEREREVRTPSGGAAPCVP--DEPAPAA 155
A P + + + +P V LA + V+ + P VP E P A
Sbjct: 658 VA--PTTAKGTST----YTTTASPFLEGTVSLAPKNHPVKEGTLTTLPLVPTASENCPVA 711
Query: 156 RTRRRDPSLRRTLAPCA-----PAWPAPPPCPAPPSRSKPALAARQQPQRRAWAAAVATQ 210
PS + T AP A P P P P+ P P + A A
Sbjct: 712 ------PSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVAS 765
Query: 211 CPHRAPTQQHRAGRESGSTGAINQ--------GRRRKDAARRLPNRNLLRDLSLPRGAQS 262
P PT+ A + S G + G +R P + P G S
Sbjct: 766 SPKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLS 825
Query: 263 SPLPGARAS-------SF-----LPAPQH--------GAPLDVAHVPDSGPRAASAPART 302
SP+ AS SF PA H GAP A P S P T
Sbjct: 826 SPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKET 885
Query: 303 PGHARTR---AAAGPAA----YLRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLN 355
P + GPA L + S + + A P +PA+ GA
Sbjct: 886 PTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAA 945
Query: 356 LPFIPGP-GGRA--RPRWSFTAGAPEPPKRVPAQAVGAHGRCRRLFWWRLRVPGPVTPGS 412
P P P GG A P+W AP PP P G GP TP S
Sbjct: 946 TP--PSPKGGPATPSPKW-----APTPPAATPPSPKG----------------GPATP-S 981
Query: 413 PRAA 416
P+ A
Sbjct: 982 PKGA 985
Score = 43.5 bits (101), Expect = 4e-04
Identities = 74/277 (26%), Positives = 96/277 (34%), Gaps = 39/277 (14%)
Query: 120 TPARYKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPP 179
TP K V L +E TPS P + PA A + S+ + A A PAP
Sbjct: 871 TPLSPKGVTLPPKETP--TPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPK 928
Query: 180 PCPAPPS-RSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRR 238
PA PS + P A P + AT P APT A S G
Sbjct: 929 GIPASPSPKGAPTPPAATPPSPK---GGPATPSPKWAPTPP-AATPPSPKGGPATPS--- 981
Query: 239 KDAARRLPNRNLLRDLSLPRGAQSSPL---PGARASSFLPAPQHGAPLDVAHVPDSGPRA 295
P+GA + P P + P+P+ GAP A P S P+
Sbjct: 982 ------------------PKGAPTPPAATPPSPKGGPATPSPK-GAPTPPAVTPPS-PKG 1021
Query: 296 ASAPARTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCPP---PLPAASLAAGAERA 352
+ A P A T AA P + +G A+ + + A T P P P A + +
Sbjct: 1022 SPAATPFPKGASTPPAATPPS-PKGSPAATP--LPKGAPTTPAATLPSPKGGPATPSLKG 1078
Query: 353 RLNLPFIPGPGGRARPRWSFTAGAPEPPKRVPAQAVG 389
P P + P GAP PP P G
Sbjct: 1079 APTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKG 1115
Score = 39.3 bits (90), Expect = 0.007
Identities = 99/447 (22%), Positives = 150/447 (33%), Gaps = 99/447 (22%)
Query: 2 PESPKAKISAVK-ERESEPKKM-STPTPTGPCLKLSCLPANP-----APSFREAAMANVA 54
P SPK + + S PKK +TP P G + +P++P PS R +A A
Sbjct: 1472 PPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTA 1531
Query: 55 LGLRRIKKKRRRERAGRKAGGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLA 114
L KK A ++A +P A ++P + PA
Sbjct: 1532 TLL---SKKTPATLAPKEA-------LIPPAMTVPSPKKTPA------------------ 1563
Query: 115 QKRSPTPARYKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPA 174
PTP A TPS A PA T + PS + L P A
Sbjct: 1564 ---IPTPKEAPA-----------TPSSKEAS---SPPAVTPSTYKGAPSPKELLIPPAVT 1606
Query: 175 WPAPPPCPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPT------QQHRAGRESGS 228
P+P P PP+ + P+ P++ AT P PT + S +
Sbjct: 1607 SPSPKEAPTPPAVTPPS------PEK-----GPATPAPKGTPTSPPVTPSSLKDSPTSPA 1655
Query: 229 TGAINQGRRRKDAARRLPNR---NLLRDLSLPRGAQSSPL--------PGARASSFLPAP 277
+ G A++ LP + L+++ + +S+P+ P + SS P
Sbjct: 1656 SVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPP 1715
Query: 278 QHGAPLDVAHVPDSGPRAASAPA-----------RTPGHARTRAAAGPAAYLRGLMVASL 326
P A GP + APA G + + GP A L
Sbjct: 1716 I--CPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPL 1773
Query: 327 AWVRRHAHTCPPPLPAASLAAGAERARLNLPFIPGPGGRARPRWSFTAGAPEPPKRVPAQ 386
A P P ++ + A ++LP P P P+ F +P P++
Sbjct: 1774 T---AAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPSK 1830
Query: 387 AVGAHGRCRRLFWWRLRVPGPVTPGSP 413
+ L L P P++ G P
Sbjct: 1831 PLAPADEDELL---PLIPPEPISGGVP 1854
Score = 30.0 bits (66), Expect = 4.3
Identities = 70/275 (25%), Positives = 92/275 (33%), Gaps = 46/275 (16%)
Query: 144 APCVPDEPAPAARTRRRD---PSLRRTLAPCAPAWPAPPPCPA-PPSRSKPALAARQQPQ 199
AP P AA + D P++ APA AP PA P S+ P L A P
Sbjct: 1415 APATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPS 1474
Query: 200 RRAWAA------------AVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKDAARRLPN 247
+ A A AT P APT A RR A P
Sbjct: 1475 PKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIA----PT 1530
Query: 248 RNLLRDLS----LPRGAQSSP---LPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPA 300
LL + P+ A P +P + + +P P+ A S A+S PA
Sbjct: 1531 ATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKE------APATPSSKEASSPPA 1584
Query: 301 RTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCP---PPLPAASLAAGAERARLNLP 357
TP + + A P L V S + + A T P PP P A A + P
Sbjct: 1585 VTP--STYKGAPSPKELLIPPAVTSPS--PKEAPTPPAVTPPSPEKGPATPAPKGTPTSP 1640
Query: 358 FI------PGPGGRARPRWSFTAGAPEPPKRVPAQ 386
+ P A A P+ K +PA+
Sbjct: 1641 PVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAK 1675
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 52.0 bits (123), Expect = 1e-06
Identities = 63/244 (25%), Positives = 91/244 (37%), Gaps = 45/244 (18%)
Query: 90 PESRRPARRAN---CPDSFRRVLVNHLAQKRSPTPARYKAVRLAEREREVRTPSGGAAPC 146
P + P RR++ S L +H + RSP+ RL+ + R+ +G
Sbjct: 243 PHTESPGRRSHRHSSGSSHSPSLSSHYSDSRSPS-------RLSPKHRDEGRKTGSQRSS 295
Query: 147 VPDEPAPAART-----RRRDPSLRRTLAP-----CAPAWPAPPPCPAPPSRSKPALAARQ 196
P+P+ + +R S +R+ A A + P P P+P R K A AA
Sbjct: 296 GSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPT 355
Query: 197 QPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSL 256
P R + P AP+ Q R GR +G G + RRR+ +R + R
Sbjct: 356 PPAR-----GKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRR 410
Query: 257 PRGAQSSPLPGARASSFLPAPQHGAPLDVAHV---PDSGP-RAASAPARTPGHARTRAAA 312
PR PAP G+ ++ DSG R A P PG R
Sbjct: 411 PR----------------PAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGH 454
Query: 313 GPAA 316
G A
Sbjct: 455 GKRA 458
Score = 42.4 bits (98), Expect = 8e-04
Identities = 83/342 (24%), Positives = 121/342 (35%), Gaps = 68/342 (19%)
Query: 17 SEPKKMSTPTPTGPCLKLSCLPANPA-----PSFREAAMAN-----VALGLRRIKKKRRR 66
S P K S+P+P + P PA PS R A + A G R +++RRR
Sbjct: 333 SPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRR 392
Query: 67 ERAGRKAGGDFRDLSLPLARSLPPE--SRRPARRANCPDSFRRVLVNHLAQKRSPTPARY 124
R R + R R PP SR +R + DS A P P
Sbjct: 393 RRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGS----GRGAPGPGPEPGSE 448
Query: 125 KAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPAP 184
+ + + R P A P+P A RR P + + + P P P
Sbjct: 449 RGHGGHGKRAKERPPRARPAST---SPSPGAHGRRGGPEGKSS---------SRSPGPHP 496
Query: 185 PSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKDAARR 244
S S ++R + R+ +A P R+P+ + R+ G ARR
Sbjct: 497 RSWS----SSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEATRARR 552
Query: 245 -----LPNRNLLRD---LSLPR---GAQSSPLP-----------------GARASSFLPA 276
P R RD PR A+ P+P R+ S P+
Sbjct: 553 RSRSYSPIRKRRRDSPSFMEPRRITSARKRPIPYYRPSPSSSSSCLSSDYSTRSHSRSPS 612
Query: 277 P--QHGAPLDVAHVPDSGPRAASAPARTPG---HARTRAAAG 313
P HG+ +H S R +P+RTP H+R+ + +G
Sbjct: 613 PGHSHGSYSSRSHGTRSRTR---SPSRTPSPSYHSRSSSESG 651
>gi|239751449 PREDICTED: hypothetical protein XP_002347867 [Homo
sapiens]
Length = 315
Score = 49.3 bits (116), Expect = 7e-06
Identities = 66/235 (28%), Positives = 88/235 (37%), Gaps = 32/235 (13%)
Query: 169 APCAPAWPAPPPCPAPPSRS---KPALAARQQPQRRAWAAAVATQCPH------RAPTQQ 219
AP + +P PC P +P A A A P P+++
Sbjct: 16 APAGSSLNSPDPCQLLPGTGWMMRPGEVAPAGGSPLAVGGAFRVSSPRPFPPRPERPSRR 75
Query: 220 HRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQH 279
HRAG G+ G ++GR R+ +R P + R + R A S P + A+ AP+
Sbjct: 76 HRAG--CGAHGPGSRGRERRRGSRDPPAGPVARARARGRSAPGSAQPASGAAGPAAAPEA 133
Query: 280 GAPL-DVAHVPDSGPR--AASAPARTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTC 336
P D A +P S R S+P R RA AGPA S+ V H
Sbjct: 134 APPAWDPATLPPSRKRNSLGSSPLHPVRLGRVRAHAGPAG-------TSILRVAPH---- 182
Query: 337 PPPLPAASLA-AG-----AERARLNLPFIPGPGGRARPRWSFTAGAPEPPKRVPA 385
P LP A + AG A R + GPGGR P PP + A
Sbjct: 183 -PALPGAQVHWAGRHRWAARRGKSLQSAWWGPGGRRNSISPGRTTFPAPPTQEAA 236
>gi|239745954 PREDICTED: hypothetical protein XP_002343623 [Homo
sapiens]
Length = 315
Score = 49.3 bits (116), Expect = 7e-06
Identities = 66/235 (28%), Positives = 88/235 (37%), Gaps = 32/235 (13%)
Query: 169 APCAPAWPAPPPCPAPPSRS---KPALAARQQPQRRAWAAAVATQCPH------RAPTQQ 219
AP + +P PC P +P A A A P P+++
Sbjct: 16 APAGSSLNSPDPCQLLPGTGWMMRPGEVAPAGGSPLAVGGAFRVSSPRPFPPRPERPSRR 75
Query: 220 HRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQH 279
HRAG G+ G ++GR R+ +R P + R + R A S P + A+ AP+
Sbjct: 76 HRAG--CGAHGPGSRGRERRRGSRDPPAGPVARARARGRSAPGSAQPASGAAGPAAAPEA 133
Query: 280 GAPL-DVAHVPDSGPR--AASAPARTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTC 336
P D A +P S R S+P R RA AGPA S+ V H
Sbjct: 134 APPAWDPATLPPSRKRNSLGSSPLHPVRLGRVRAHAGPAG-------TSILRVAPH---- 182
Query: 337 PPPLPAASLA-AG-----AERARLNLPFIPGPGGRARPRWSFTAGAPEPPKRVPA 385
P LP A + AG A R + GPGGR P PP + A
Sbjct: 183 -PALPGAQVHWAGRHRWAARRGKSLQSAWWGPGGRRNSISPGRTTFPAPPTQEAA 236
>gi|239756937 PREDICTED: hypothetical protein [Homo sapiens]
Length = 294
Score = 48.9 bits (115), Expect = 9e-06
Identities = 66/235 (28%), Positives = 88/235 (37%), Gaps = 32/235 (13%)
Query: 169 APCAPAWPAPPPCPAPPSRS---KPALAARQQPQRRAWAAAVATQCPH------RAPTQQ 219
AP + +P PC P +P A A A P P+++
Sbjct: 16 APAGSSLNSPDPCQLLPGTGWMMRPGEVAPAGGSPLAVGGAFRVSSPRPFPPRPERPSRR 75
Query: 220 HRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQH 279
HRAG G+ G ++GR R+ +R P + R + R A S P + A+ AP+
Sbjct: 76 HRAG--CGAHGPGSRGRERRRGSRDPPAGPVARARARGRSAPGSAQPASGAAGPAAAPEA 133
Query: 280 GAPL-DVAHVPDSGPR--AASAPARTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTC 336
P D A +P S R S+P R RA AGPA S+ V H
Sbjct: 134 APPAWDPATLPPSRKRNSLGSSPLHPVRLGRVRAHAGPAG-------PSILRVAPH---- 182
Query: 337 PPPLPAASLA-AG-----AERARLNLPFIPGPGGRARPRWSFTAGAPEPPKRVPA 385
P LP A + AG A R + GPGGR P PP + A
Sbjct: 183 -PALPGAQVHWAGRHRWAARRGKSLQSAWWGPGGRRNSISPGRTTFPAPPTQEAA 236
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 47.8 bits (112), Expect = 2e-05
Identities = 64/257 (24%), Positives = 101/257 (39%), Gaps = 35/257 (13%)
Query: 137 RTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWP---APPPCPAPPSRSKPALA 193
RTP +A P + PA ++DP+ + L P P P APP PAPP R P
Sbjct: 1113 RTPGPPSAQSSPIDAQPATPLPQKDPA--QPLEPKRPPPPRPVAPPTRPAPPQRPPPPSG 1170
Query: 194 ARQ-QPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKDAARRLPNRNLLR 252
AR P R+ + A P A ++ A + G+T RKD N+ R
Sbjct: 1171 ARSPAPTRKEFGGIGAPPSPGVA-RREMEAPKSPGTT--------RKD--------NIGR 1213
Query: 253 DLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPARTPGHARTRAAA 312
P+ + P P +++ P V P S RA++ ++T +
Sbjct: 1214 SQPSPQAGLAGPGPAGYSTARPTIPPRAG---VISAPQSHARASAGRLTPESQSKTSETS 1270
Query: 313 GPAAYLRGLMVASLAWVRRHAHTCPPPL-----PAASLAAGAERA--RLNLPFIPGPGGR 365
+ +L + A+ + + PPP P +AA ++ + NL P P R
Sbjct: 1271 KGSTFLPEPLKPQAAFPPQ--SSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPPQPPPR 1328
Query: 366 ARPRWSFTAGAPEPPKR 382
+R S + A P++
Sbjct: 1329 SRSSHSLPSEASSQPQQ 1345
Score = 29.3 bits (64), Expect = 7.3
Identities = 53/231 (22%), Positives = 75/231 (32%), Gaps = 48/231 (20%)
Query: 18 EPKKMSTPTPTGPCLKLSCLPANPAPSFREAAMANVALGLRRIKKKRRRERAGRKA---- 73
EPK+ P P P P PAP R + R R+E G A
Sbjct: 1143 EPKRPPPPRPVAP-------PTRPAPPQRPPPPSGA-----RSPAPTRKEFGGIGAPPSP 1190
Query: 74 GGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQKRSPTPARYKAVR--LAE 131
G R++ P + P +R+ D+ R + A P PA Y R +
Sbjct: 1191 GVARREMEAPKS---PGTTRK--------DNIGRSQPSPQAGLAGPGPAGYSTARPTIPP 1239
Query: 132 REREVRTPSG----GAAPCVPDEPAPAARTRRRDPSLRRTLAPCA---PAWPAPPPC--- 181
R + P A P+ + + T + L L P A P PPP
Sbjct: 1240 RAGVISAPQSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRL 1299
Query: 182 ---------PAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAG 223
P P S +P L QP R+ ++ P Q+ +G
Sbjct: 1300 QEPLVPVAAPMPQSGPQPNLETPPQPPPRSRSSHSLPSEASSQPQQEQPSG 1350
>gi|239755232 PREDICTED: hypothetical protein [Homo sapiens]
Length = 501
Score = 47.8 bits (112), Expect = 2e-05
Identities = 82/324 (25%), Positives = 114/324 (35%), Gaps = 53/324 (16%)
Query: 13 KERESEPKKMSTPTPTGPCLKLSCLPANPAPSFREAAMANVALGLRRIKKKRRRERAGRK 72
KE++ + S P TG ++ + P+P + + KK+++ +
Sbjct: 188 KEQQQGQRGASEPGMTGKKIRKNARNLVPSPETTDPQDGALVDQKPHHGKKKKKPAS--- 244
Query: 73 AGGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQKRSPTPARYKAVRLAER 132
LSLP +R P SR + + + R + L + PAR A R
Sbjct: 245 -------LSLPFSRFFSPGSRTLTQLRSFSSTCR---FSPLWVCPAAAPARSPA-RQQGS 293
Query: 133 EREVRTPSGGAAPCVPDEP---------APAARTRRRDPSLRRTLAPCAPAWPAPPPCPA 183
+R P A P P AP R LRRT AP P A
Sbjct: 294 PGVLRVPPEAAPPLPRPRPHLLTRCPPRAPRLRRLEAGRRLRRTAAPLGPVAGAGSSFGG 353
Query: 184 PPSRSKPALAARQQ----PQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRK 239
P R AL + ++ P WAAAV Q H Q RA R+ GS RR +
Sbjct: 354 RPHRPSLALGSDRRSPEAPHYLLWAAAVRGQEAHSLWPLQPRARRQGGSD---RHRRRGQ 410
Query: 240 DAARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAP 299
A L + + P GA+ P P AR V ++ P A
Sbjct: 411 SGASGLGTAAAGAERTSPVGAR--PPPPARL-----------------VTNTAPTLGGAG 451
Query: 300 ARTPGHARTRAAAGPAAYLRGLMV 323
R G R A P A RGL++
Sbjct: 452 PRLEG----RGGAAPPAGKRGLLI 471
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 47.4 bits (111), Expect = 3e-05
Identities = 64/256 (25%), Positives = 100/256 (39%), Gaps = 35/256 (13%)
Query: 137 RTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWP---APPPCPAPPSRSKPALA 193
RTP +A P + PA ++DP+ + L P P P APP PAPP R P
Sbjct: 1113 RTPGPPSAQSSPIDAQPATPLPQKDPA--QPLEPKRPPPPRPVAPPTRPAPPQRPPPPSG 1170
Query: 194 ARQ-QPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKDAARRLPNRNLLR 252
AR P R+ + A P A ++ A + G+T RKD N+ R
Sbjct: 1171 ARSPAPTRKEFGGIGAPPSPGVA-RREMEAPKSPGTT--------RKD--------NIGR 1213
Query: 253 DLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPARTPGHARTRAAA 312
P+ + P P +++ P V P S RA++ ++T +
Sbjct: 1214 SQPSPQAGLAGPGPAGYSTARPTIPPRAG---VISAPQSHARASAGRLTPESQSKTSETS 1270
Query: 313 GPAAYLRGLMVASLAWVRRHAHTCPPPL-----PAASLAAGAERA--RLNLPFIPGPGGR 365
+ +L + A+ + + PPP P +AA ++ + NL P P R
Sbjct: 1271 KGSTFLPEPLKPQAAFPPQ--SSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPPQPPPR 1328
Query: 366 ARPRWSFTAGAPEPPK 381
+R S + A P+
Sbjct: 1329 SRSSHSLPSEASSQPQ 1344
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 47.4 bits (111), Expect = 3e-05
Identities = 79/269 (29%), Positives = 94/269 (34%), Gaps = 49/269 (18%)
Query: 159 RRDPSLRRTLAPCAPAWPAPPPCPAPPSRSKPALAARQQPQRRAWAAAVATQCP--HRAP 216
R DP RR AP P PA PP P+P + P R++ AA P H
Sbjct: 709 RHDPPPRRPAAPPGPPGPAAPPAPSP---AAPVRTRRRRKLYELHAAGAPPPPPPGHAPA 765
Query: 217 TQQHRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLS-LPRGAQSSPLPGARASSFLP 275
+ R G SGS + R AA + DLS PR PLPGA A +
Sbjct: 766 PESPRPGSGSGSGPGLAPARSPGPAA------DGPIDLSKKPR----RPLPGAPAPALAD 815
Query: 276 APQ--------HGAPLDVAHVPDSGPRAASAPARTPGHARTRAAAGPAAYLRGLMVASLA 327
+ H +AH S P A PG AAA P G + L
Sbjct: 816 YHECTACRVSFHSLEAYLAHKKYSCPAAP-----PPGALGLPAAACPYCPPNGPVRGDLL 870
Query: 328 WVRRHAHTCPPPLPAASLAAGAERARLNLPFIPGPGGRARPRWSFTAGAPEPPKRVPAQA 387
R AH L A LA AR P GP P A +P+P R P
Sbjct: 871 EHFRLAHGL---LLGAPLAGPGVEAR--TPADRGPSPAPAP-----AASPQPGSRGPRDG 920
Query: 388 VGAHGRCRRLFWWRLRVPGPVTPGSPRAA 416
+G + P P P SP AA
Sbjct: 921 LGPEP----------QEPPPGPPPSPAAA 939
Score = 45.4 bits (106), Expect = 1e-04
Identities = 86/302 (28%), Positives = 101/302 (33%), Gaps = 59/302 (19%)
Query: 124 YKAVRLAEREREVRTPSGGAAPCVPDEPAPAA--RTRRRDPSLRRTLAPCAPAWPAPPPC 181
Y A R R P G P P P+PAA RTRRR L A AP P P
Sbjct: 705 YCASRHDPPPRRPAAPPGPPGPAAPPAPSPAAPVRTRRR-RKLYELHAAGAPPPPPPGHA 763
Query: 182 PAPP-------SRSKPALAARQQPQRRAWAAAVATQCPHR----------APTQQHRAGR 224
PAP S S P LA + P A ++ P R A + A R
Sbjct: 764 PAPESPRPGSGSGSGPGLAPARSPGPAADGPIDLSKKPRRPLPGAPAPALADYHECTACR 823
Query: 225 ES-GSTGAINQGRRRKDAARRLPNRNLLRDLSLPRGAQSSPLPGARASSF-------LPA 276
S S A ++ A P L + P + P+ G F L A
Sbjct: 824 VSFHSLEAYLAHKKYSCPAAPPPGALGLPAAACPYCPPNGPVRGDLLEHFRLAHGLLLGA 883
Query: 277 PQHGAPLDVAHVPDSGPRAASAPART--PGHARTRAAAGPAAYLRGLMVASLAWVRRHAH 334
P G ++ D GP A APA + PG R GP
Sbjct: 884 PLAGPGVEARTPADRGPSPAPAPAASPQPGSRGPRDGLGPEPQE---------------- 927
Query: 335 TCPPPLPAASLAAGAERARLNLPFIPGPGGRARPRWSFTAGAPEPPKRVPAQAV-GAHGR 393
PPP P S AA E +P P A P +S G P K PA G H
Sbjct: 928 --PPPGPPPSPAAAPEA-------VPPP--PAPPSYS-DKGVQTPSKGTPAPLPNGNHRY 975
Query: 394 CR 395
CR
Sbjct: 976 CR 977
>gi|239749768 PREDICTED: hypothetical protein [Homo sapiens]
Length = 591
Score = 47.0 bits (110), Expect = 3e-05
Identities = 75/278 (26%), Positives = 100/278 (35%), Gaps = 52/278 (18%)
Query: 59 RIKKKRRRERAGRKAGGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQKRS 118
++K K++++ A LSLP +R P SR + + + R + L +
Sbjct: 323 KVKGKKKKKPAS---------LSLPFSRFFSPGSRTLTQLRSFSSTCR---FSPLWVCPA 370
Query: 119 PTPARYKAVRLAEREREVRTPSGGAAPCVPDEP---------APAARTRRRDPSLRRTLA 169
PAR A R +R P A P P AP R LRRT A
Sbjct: 371 AAPARSPA-RQQGSPGVLRVPPEAAPPLPRPRPHLLTRCPPRAPRLRRLEAGRRLRRTAA 429
Query: 170 PCAPAWPAPPPCPAPPSRSKPALAARQQ----PQRRAWAAAVATQCPHRAPTQQHRAGRE 225
P P A P R AL + ++ P WAAAV Q H Q RA R+
Sbjct: 430 PLGPVAGAGSSFGGRPHRPSLALGSDRRSPEAPHYLLWAAAVRGQEAHSLWPLQPRARRQ 489
Query: 226 SGSTGAINQGRRRKDAARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDV 285
GS RR + A L + + P GA+ P P AR
Sbjct: 490 GGSD---RHRRRGQSGASGLGTAAAGAERTSPVGAR--PPPPARL--------------- 529
Query: 286 AHVPDSGPRAASAPARTPGHARTRAAAGPAAYLRGLMV 323
V ++ P A R G R A P A RGL++
Sbjct: 530 --VTNTAPTLGGAGPRLEG----RGGAAPPAGKRGLLI 561
>gi|239744027 PREDICTED: hypothetical protein XP_002343007 [Homo
sapiens]
Length = 591
Score = 47.0 bits (110), Expect = 3e-05
Identities = 75/278 (26%), Positives = 100/278 (35%), Gaps = 52/278 (18%)
Query: 59 RIKKKRRRERAGRKAGGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQKRS 118
++K K++++ A LSLP +R P SR + + + R + L +
Sbjct: 323 KVKGKKKKKPAS---------LSLPFSRFFSPGSRTLTQLRSFSSTCR---FSPLWVCPA 370
Query: 119 PTPARYKAVRLAEREREVRTPSGGAAPCVPDEP---------APAARTRRRDPSLRRTLA 169
PAR A R +R P A P P AP R LRRT A
Sbjct: 371 AAPARSPA-RQQGSPGVLRVPPEAAPPLPRPRPHLLTRCPPRAPRLRRLEAGRRLRRTAA 429
Query: 170 PCAPAWPAPPPCPAPPSRSKPALAARQQ----PQRRAWAAAVATQCPHRAPTQQHRAGRE 225
P P A P R AL + ++ P WAAAV Q H Q RA R+
Sbjct: 430 PLGPVAGAGSSFGGRPHRPSLALGSDRRSPEAPHYLLWAAAVRGQEAHSLWPLQPRARRQ 489
Query: 226 SGSTGAINQGRRRKDAARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDV 285
GS RR + A L + + P GA+ P P AR
Sbjct: 490 GGSD---RHRRRGQSGASGLGTAAAGAERTSPVGAR--PPPPARL--------------- 529
Query: 286 AHVPDSGPRAASAPARTPGHARTRAAAGPAAYLRGLMV 323
V ++ P A R G R A P A RGL++
Sbjct: 530 --VTNTAPTLGGAGPRLEG----RGGAAPPAGKRGLLI 561
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 47.0 bits (110), Expect = 3e-05
Identities = 67/261 (25%), Positives = 87/261 (33%), Gaps = 58/261 (22%)
Query: 138 TPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPAPPSRSKPALAARQQ 197
T G CVP E APA RDP + P PA P P+P + PA A
Sbjct: 557 TTDEGPVYCVPHEEAPA---ESRDPEV--------PTVPAEAPAPSPVPLTTPASAEE-- 603
Query: 198 PQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLP 257
P A + R+ G R + AR R + LSL
Sbjct: 604 ------------AIPLPASSDSERSASSVEGPGGALYARVARREARPARARGEIGGLSL- 650
Query: 258 RGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPARTPGHARTRAAAGPAAY 317
SP P R P P V+ + AA+ A +P + AA P+
Sbjct: 651 -----SPSPERRKP---PPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKR 702
Query: 318 LRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLNLPFIPGPGGRARPRWSFTAGAP 377
R P A ++ G+ R R P PG P + AP
Sbjct: 703 KR----------------TPSDKSAHTVEHGSPRTRDPTPRPPG-----LPEEATALAAP 741
Query: 378 EPPK---RVPAQAVGAHGRCR 395
PP+ R + +GAHGR R
Sbjct: 742 SPPRARARAAPRPLGAHGRRR 762
Score = 46.6 bits (109), Expect = 4e-05
Identities = 86/322 (26%), Positives = 122/322 (37%), Gaps = 72/322 (22%)
Query: 19 PKKMSTPTP---TGPCLKLSCLPANPAPSFREAAMANV-ALGLRRIKKKRRRERAGRKAG 74
P + P+P T P +P PA S E + ++V G + RRE +A
Sbjct: 584 PAEAPAPSPVPLTTPASAEEAIPL-PASSDSERSASSVEGPGGALYARVARREARPARAR 642
Query: 75 GDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQKRSPTPARYKAVRLAERER 134
G+ LSL S PE R+P PD + V+ + K S A
Sbjct: 643 GEIGGLSL----SPSPERRKPPP----PDPATKPKVSWIHGKHSAAAA------------ 682
Query: 135 EVRTPSGGAAPCVP---DEPAPAARTRRRDPSLR--RTLAPCAPAWPAPPPCPAPPSRSK 189
G AP P E AP+ R+R PS + T+ +P P P P
Sbjct: 683 -------GRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEA 735
Query: 190 PALAARQQPQRRAWAA--AVATQCPHRAPTQQHRA---------------GRESGSTGAI 232
ALAA P+ RA AA + R+P ++ A GR + GA
Sbjct: 736 TALAAPSPPRARARAAPRPLGAHGRRRSPAKRAEAASMLAADVRGKTRSLGRAEVALGA- 794
Query: 233 NQGRRRKDAARRLPNRNLLRDLSLPRGAQSSPLPG-ARASSFLPAPQHGAPLDVAHVPDS 291
QG R K A + R+ + S R ++ PG +A++ LPAP+
Sbjct: 795 -QGPREKPAPPQKAKRS-VPPASPARAPPATETPGPEKAATDLPAPE------------- 839
Query: 292 GPRAASAPARTPGHARTRAAAG 313
PR P + P ++R AAG
Sbjct: 840 TPR-KKTPIQKPPRKKSREAAG 860
>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
sapiens]
Length = 865
Score = 47.0 bits (110), Expect = 3e-05
Identities = 67/261 (25%), Positives = 87/261 (33%), Gaps = 58/261 (22%)
Query: 138 TPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPAPPSRSKPALAARQQ 197
T G CVP E APA RDP + P PA P P+P + PA A
Sbjct: 552 TTDEGPVYCVPHEEAPA---ESRDPEV--------PTVPAEAPAPSPVPLTTPASAEE-- 598
Query: 198 PQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLP 257
P A + R+ G R + AR R + LSL
Sbjct: 599 ------------AIPLPASSDSERSASSVEGPGGALYARVARREARPARARGEIGGLSL- 645
Query: 258 RGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPARTPGHARTRAAAGPAAY 317
SP P R P P V+ + AA+ A +P + AA P+
Sbjct: 646 -----SPSPERRKP---PPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKR 697
Query: 318 LRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLNLPFIPGPGGRARPRWSFTAGAP 377
R P A ++ G+ R R P PG P + AP
Sbjct: 698 KR----------------TPSDKSAHTVEHGSPRTRDPTPRPPG-----LPEEATALAAP 736
Query: 378 EPPK---RVPAQAVGAHGRCR 395
PP+ R + +GAHGR R
Sbjct: 737 SPPRARARAAPRPLGAHGRRR 757
Score = 46.6 bits (109), Expect = 4e-05
Identities = 86/322 (26%), Positives = 122/322 (37%), Gaps = 72/322 (22%)
Query: 19 PKKMSTPTP---TGPCLKLSCLPANPAPSFREAAMANV-ALGLRRIKKKRRRERAGRKAG 74
P + P+P T P +P PA S E + ++V G + RRE +A
Sbjct: 579 PAEAPAPSPVPLTTPASAEEAIPL-PASSDSERSASSVEGPGGALYARVARREARPARAR 637
Query: 75 GDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQKRSPTPARYKAVRLAERER 134
G+ LSL S PE R+P PD + V+ + K S A
Sbjct: 638 GEIGGLSL----SPSPERRKPPP----PDPATKPKVSWIHGKHSAAAA------------ 677
Query: 135 EVRTPSGGAAPCVP---DEPAPAARTRRRDPSLR--RTLAPCAPAWPAPPPCPAPPSRSK 189
G AP P E AP+ R+R PS + T+ +P P P P
Sbjct: 678 -------GRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEA 730
Query: 190 PALAARQQPQRRAWAA--AVATQCPHRAPTQQHRA---------------GRESGSTGAI 232
ALAA P+ RA AA + R+P ++ A GR + GA
Sbjct: 731 TALAAPSPPRARARAAPRPLGAHGRRRSPAKRAEAASMLAADVRGKTRSLGRAEVALGA- 789
Query: 233 NQGRRRKDAARRLPNRNLLRDLSLPRGAQSSPLPG-ARASSFLPAPQHGAPLDVAHVPDS 291
QG R K A + R+ + S R ++ PG +A++ LPAP+
Sbjct: 790 -QGPREKPAPPQKAKRS-VPPASPARAPPATETPGPEKAATDLPAPE------------- 834
Query: 292 GPRAASAPARTPGHARTRAAAG 313
PR P + P ++R AAG
Sbjct: 835 TPR-KKTPIQKPPRKKSREAAG 855
>gi|145309320 forkhead box Q1 [Homo sapiens]
Length = 403
Score = 46.6 bits (109), Expect = 4e-05
Identities = 65/212 (30%), Positives = 81/212 (38%), Gaps = 55/212 (25%)
Query: 162 PSLRRTLAPCAPAWPAPPPCPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHR 221
P LR AP PA APPP PA P+ + ARQ+ +
Sbjct: 225 PGLRPEEAPGLPA--APPPAPAAPASPRMRSPARQEERASP------------------- 263
Query: 222 AGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLPRGAQSSP--------LPGARASSF 273
AG+ S S+ AI+ R+ +RRL R+ +L GA P LP A +
Sbjct: 264 AGKFS-SSFAIDSILRKPFRSRRL--RDTAPGTTLQWGAAPCPPLPAFPALLPAAPCRAL 320
Query: 274 LPAPQHGAPLDV------AHVPDSGPRAASAPARTPGHARTRAAAGPAAYLRGLMVASLA 327
LP +GA A VP + P AP AA PA LRG
Sbjct: 321 LPLCAYGAGEPARLGAREAEVPPTAPPLLLAPL---------PAAAPAKPLRGPAAGG-- 369
Query: 328 WVRRHAHT-CPPPLPAASLAAGAERARLNLPF 358
AH CP LPAA AA R +LP+
Sbjct: 370 -----AHLYCPLRLPAALQAASVRRPGPHLPY 396
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 46.6 bits (109), Expect = 4e-05
Identities = 52/182 (28%), Positives = 74/182 (40%), Gaps = 32/182 (17%)
Query: 46 REAAMANVALGLRRIKKKRRRERAGRKAGGDFRDLSLPLARSLPPESRRPARRANCPDSF 105
RE AL R KKR+ A +A LS A L P+S+ AR ++ S+
Sbjct: 422 RENEKEKSALARERSLKKRQSLPASPRAR-----LSASTASELSPKSK--ARPSSPSTSW 474
Query: 106 RRVLV-------NHLAQKRSPTPARYKAV---RLAEREREVRTPSGGAAPCVPDEPAPAA 155
R H + P+P A R+ +E +PS P +
Sbjct: 475 HRPASPCPSPGPGHTLPPKPPSPRGTTASPKGRVRRKEEAKESPSAAG-------PEDKS 527
Query: 156 RTRRRDPSLRRTLAPCAPA-WPAPPPCPAPPSRSKPALAARQQPQRRAWAAAVATQCPHR 214
+++RR + + + AP +PA PAP P PAPP + +P P AAV T P
Sbjct: 528 QSKRRASNEKESAAPASPAPSPAPSPTPAPPQKEQP-------PAETPTDAAVLTSPPAP 580
Query: 215 AP 216
AP
Sbjct: 581 AP 582
Score = 37.7 bits (86), Expect = 0.021
Identities = 42/161 (26%), Positives = 61/161 (37%), Gaps = 29/161 (18%)
Query: 1 MPESPKAKISAVKERESEPKKMSTPT--------PTGPCLKLSCLPANPAPSFREAAMAN 52
+P SP+A++SA E PK + P+ P PC S P + P +
Sbjct: 443 LPASPRARLSASTASELSPKSKARPSSPSTSWHRPASPC--PSPGPGHTLPPKPPSPRGT 500
Query: 53 VALGLRRIKKKRRRERAGRKAGGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNH 112
A R+++K + + AG + + S A S ES PA A P
Sbjct: 501 TASPKGRVRRKEEAKESPSAAGPEDKSQSKRRA-SNEKESAAPASPAPSP---------- 549
Query: 113 LAQKRSPTPARYKAVRLAEREREVRTPSGGAAPCVPDEPAP 153
SPTPA + + + TP+ A P PAP
Sbjct: 550 ---APSPTPAPPQ-----KEQPPAETPTDAAVLTSPPAPAP 582
Score = 34.3 bits (77), Expect = 0.23
Identities = 72/354 (20%), Positives = 121/354 (34%), Gaps = 65/354 (18%)
Query: 121 PARYKAVRLAEREREVRTPSG--GAAPCVPDEPAPAARTRRRDPS-----LRRTLAPCAP 173
PA A + E +PSG G P P E +P++ + R P+ R P
Sbjct: 53 PAMKNATSSKQLPLEPESPSGQVGPRPAPPQEESPSSEAKSRGPTPPAMGPRDARPPRRS 112
Query: 174 AWPAPPPCPA---PPSR-------SKPALAARQQPQRRAWAAAVATQC------------ 211
+ P+P PA PP++ + LA ++ +R + AA
Sbjct: 113 SQPSPTAVPASDSPPTKQEVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKAKALRE 172
Query: 212 -----------PHRAPTQQHRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLPR-- 258
R +Q RA E + + + R +AA + + ++ R
Sbjct: 173 KQLQERRRRLEEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWS 232
Query: 259 --GAQSSPLPGARAS------SFLPAPQHGAPLDVAHVPDSGPRAASAPARTPGHARTRA 310
GA PG + S S + P+H + + S ++P+R + +
Sbjct: 233 WAGALHHSSPGHKTSGSRCSVSAVNLPKHVDSIINKRLSKSSATLWNSPSR---NRSLQL 289
Query: 311 AAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLNLPFIPGPGGRARPRW 370
+A ++ + LM +L+++ R P G + PG G
Sbjct: 290 SAWESSIVDRLMTPTLSFLARSRSAVTLPRNGRDQGRGCD---------PGRGPTWGRAG 340
Query: 371 SFTAGAPEPPKRVPAQAVGAHGRCRRLFWWRLRVPGPVTPGSPRAACPGHHSEQ 424
+ A P+P + P+ AV C R P VT R A G E+
Sbjct: 341 ASLARGPQPDRTHPSAAVPV---CPRSASASPLTPCSVTRSVHRCAPAGERGER 391
Score = 33.5 bits (75), Expect = 0.39
Identities = 48/205 (23%), Positives = 72/205 (35%), Gaps = 20/205 (9%)
Query: 118 SPTPARYKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPA 177
SP P R + +++E + +E +A R R R++L PA P
Sbjct: 399 SPAPVRRRPEASPVQKKEKKDKER------ENEKEKSALARERSLKKRQSL----PASPR 448
Query: 178 PPPCPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAP--TQQHRAGRESGSTGAINQG 235
+ S P AR +W A+ CP P T + G+T +
Sbjct: 449 ARLSASTASELSPKSKARPSSPSTSWHRP-ASPCPSPGPGHTLPPKPPSPRGTTASPKGR 507
Query: 236 RRRKDAARRLPNRNLLRDLSLPR----GAQSSPLPGARASSFLPAPQHGAP---LDVAHV 288
RRK+ A+ P+ D S + + S P + A S P+P P A
Sbjct: 508 VRRKEEAKESPSAAGPEDKSQSKRRASNEKESAAPASPAPSPAPSPTPAPPQKEQPPAET 567
Query: 289 PDSGPRAASAPARTPGHARTRAAAG 313
P S PA P ++ AG
Sbjct: 568 PTDAAVLTSPPAPAPPVTPSKPMAG 592
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 46.2 bits (108), Expect = 6e-05
Identities = 48/152 (31%), Positives = 63/152 (41%), Gaps = 16/152 (10%)
Query: 89 PPESRRPARRANCPDSFRRVL---VNHLAQKRSPTPARYKAVRLAEREREVRTPSGGAAP 145
PP S +P P + V +P+PAR LA+ PS GA+P
Sbjct: 1268 PPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGT--PPSLGASP 1325
Query: 146 CVPDEP-APAARTRRRDPSLRRTLAPCAPAWPAPPPCPAPPSRSKPALAARQQPQRRAWA 204
P P APA + P R A A A AP PAPP + P +ARQ+ + +
Sbjct: 1326 AKPPSPGAPALHVPAKPP---RAAAAAAAAAAAP---PAPPEGASPGDSARQKLEETSAC 1379
Query: 205 AAVATQCPHRAPTQQHRAG-RESG---STGAI 232
A A Q Q+ G R+S STG+I
Sbjct: 1380 LAAALQAVEEKIRQEDAQGPRDSAAEKSTGSI 1411
Score = 43.9 bits (102), Expect = 3e-04
Identities = 43/153 (28%), Positives = 52/153 (33%), Gaps = 27/153 (17%)
Query: 88 LPPESRRPARRANCPDSFRRVLVNHLAQKR-SPTPARYKAVRLAEREREVRTPSGGAAPC 146
LPP + A P S + VL + + + SPTP K EV+ G P
Sbjct: 1211 LPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPPV 1270
Query: 147 VPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPA----------------------- 183
P P P + P P A P+P P PA
Sbjct: 1271 SPKPPPPPTAPK---PVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAK 1327
Query: 184 PPSRSKPALAARQQPQRRAWAAAVATQCPHRAP 216
PPS PAL +P R A AAA A P P
Sbjct: 1328 PPSPGAPALHVPAKPPRAAAAAAAAAAAPPAPP 1360
Score = 30.4 bits (67), Expect = 3.3
Identities = 73/283 (25%), Positives = 97/283 (34%), Gaps = 63/283 (22%)
Query: 88 LPPESR----RPARRANCPDSFRRVLVNHLAQKRSP--TPAR---YKAV-RLAEREREVR 137
LPPE+ RP +RA+ S R + +R PA Y V R R VR
Sbjct: 865 LPPEADAEPGRPKKRAH---SLNRYAASDSEPERDELLVPAAAGPYATVQRRVGRSHSVR 921
Query: 138 TPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPAPPSRSKPALAARQQ 197
P+G A V + A R R++ P PPP PP RS ALA+
Sbjct: 922 APAG-ADKNVNRSQSFAVRPRKKGP---------------PPP---PPKRSSSALAS--- 959
Query: 198 PQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLP 257
A P P E G G Q RR D A + + S+
Sbjct: 960 ------ANLADEPVPDAEP--------EDGLLGVRAQCRRASDLAGSVDTGSAGSVKSIA 1005
Query: 258 RGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPARTPGHARTRAAAGPAA- 316
+ S + G ++ P H P + P+ G R A+ A + + A GP
Sbjct: 1006 AMLELSSIGGGGRAARRPPEGHPTPRPAS--PEPG-RVATVLA----SVKHKEAIGPGGE 1058
Query: 317 ------YLRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERAR 353
L G + LA RR P P G +R R
Sbjct: 1059 VVNRRRTLSGPVTGLLATARRGPGESADPGPFVEDGTGRQRPR 1101
Score = 29.6 bits (65), Expect = 5.6
Identities = 43/163 (26%), Positives = 56/163 (34%), Gaps = 32/163 (19%)
Query: 275 PAPQHGAPLDVAHVPDSGPRAASA--PARTPGHARTRAAAGPAAYLRGLMVASLAWVR-- 330
P P P D+AH+P P A PA+ P + P L+G + V
Sbjct: 1195 PPPAEPPPTDLAHLPPLPPPEGEARKPAKPPVSPKP-VLTQPVPKLQGSPTPTSKKVPLP 1253
Query: 331 -------RHAHTCPPPL----PAASLAAGAERARLNLPFIPGPGGRARPRWSFTAGAPEP 379
+ AH PPP+ P A +A L P G A P + AP P
Sbjct: 1254 GPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGL-----PSGSAGP-----SPAPSP 1303
Query: 380 PKRVPAQAVGAHGRCRRLFWWRLRVPGPVTPG------SPRAA 416
++ PA G L + P P P PRAA
Sbjct: 1304 ARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAA 1346
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 46.2 bits (108), Expect = 6e-05
Identities = 79/289 (27%), Positives = 99/289 (34%), Gaps = 69/289 (23%)
Query: 115 QKRSPTPARYKAVRLAEREREVRTPSGGA-APCVPDEPAPAART---RRRDPSLRRTLAP 170
++RSP P K L E TP+G A PC+ PAPA +T R + L L P
Sbjct: 768 EERSPQPPTGKWPSLPE------TPTGLADIPCLVIPPAPAKKTALQRSPETPLEICLVP 821
Query: 171 C--APAWPAPPPCPAPPSRSKPA---------LAARQQPQRRAWAAAVATQCPHRAPTQQ 219
+PA P+P P + P S P L AR P ++ + AV T P+
Sbjct: 822 VGPSPASPSPEPPVSKPVASSPTEQVPSQEMPLLARPSPPVQSVSPAVPTP-----PSMS 876
Query: 220 HRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAP-Q 278
AA P L SLP P LP P
Sbjct: 877 ---------------------AALPFPAGGLGMPPSLPPPPLQPPSLPLSMGPVLPDPFT 915
Query: 279 HGAPLD----VAHVPDSGPRAASAPARTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAH 334
H APL HV SG P P + T P AY S+ W
Sbjct: 916 HYAPLPSWPCYPHVSPSGYPCLPPPPTVPLVSGT-----PGAYAVP-PTCSVPWA----- 964
Query: 335 TCPPPLPAASLAAGAERARLNLPFIPGPGGRARPRWSFTAGAPEPPKRV 383
PPP P + ++ L GPG + P WS P PP +
Sbjct: 965 --PPPAPVSPYSSTCTYGPLGW----GPGPQHAPFWSTVPPPPLPPASI 1007
Score = 31.2 bits (69), Expect = 1.9
Identities = 53/215 (24%), Positives = 71/215 (33%), Gaps = 44/215 (20%)
Query: 180 PCPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRK 239
P PA P A Q PQ +A A A P + R E+ T
Sbjct: 1059 PVPASPHPKHKVSALVQSPQMKALACVSAEGVTVEEPASE-RLKPETQET---------- 1107
Query: 240 DAARRLPNRNLLRDLSLPRGAQSSPLPGA-----RASSFLPAPQHGAPLDV--AHVPDSG 292
R P + + PR + LP R SFLP P+ DV A + + G
Sbjct: 1108 -RPREKPPLPATKAVPTPRQSTVPKLPAVHPARLRKLSFLPTPRTQGSEDVVQAFISEIG 1166
Query: 293 PRAASAPARTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERA 352
A+ + ++ A CPPP PA SLA G
Sbjct: 1167 IEASDLSSLLEQFEKSEAKK----------------------ECPPPAPADSLAVG-NSG 1203
Query: 353 RLNLPFIPGPGGRAR-PRWSFTAGAPEPPKRVPAQ 386
+++P P R + P + AG PP P Q
Sbjct: 1204 GVDIPQEKRPLDRLQAPELANVAGL-TPPATPPHQ 1237
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 45.8 bits (107), Expect = 8e-05
Identities = 46/150 (30%), Positives = 56/150 (37%), Gaps = 33/150 (22%)
Query: 178 PPPCPAPP-------SRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTG 230
PPP PAPP +R P AAR P + +CP A G T
Sbjct: 39 PPPRPAPPRPGEEPGNRHPPPPAARTHP------GSCRARCPSPAA-----GGLRGPWTA 87
Query: 231 AINQGRRRKDAARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQH----------- 279
A + R + AA P R + LP G+ ++P PG A P P
Sbjct: 88 APGRQRADEGAAAARPERQRVWARRLP-GSAAAPAPGRDALRLPPPPPPPPERPRLPPAG 146
Query: 280 --GAPLDVAHVPDSGPRAASAPARTPGHAR 307
G P D A P P S PA PGHA+
Sbjct: 147 LAGGPADSAP-PSPAPAPRSRPAPRPGHAQ 175
Score = 30.8 bits (68), Expect = 2.5
Identities = 49/172 (28%), Positives = 58/172 (33%), Gaps = 40/172 (23%)
Query: 237 RRKDAARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAA 296
RR+ AR P+ + SL R A PG R P P AP P +
Sbjct: 8 RRQGRARGRPHSQV----SLARRAPLMFGPGLRD----PPPPRPAPPRPGEEPGNRHPPP 59
Query: 297 SAPARTPGHARTRAAAGPAAYLRGLMVAS------------------LAWVRRHAHTCPP 338
A PG R R + A LRG A+ W RR
Sbjct: 60 PAARTHPGSCRARCPSPAAGGLRGPWTAAPGRQRADEGAAAARPERQRVWARR------- 112
Query: 339 PLPAASLAAGAERARLNLPFIPGPGGRARPRW--SFTAGAP---EPPKRVPA 385
LP ++ A R L LP P P RPR + AG P PP PA
Sbjct: 113 -LPGSAAAPAPGRDALRLP-PPPPPPPERPRLPPAGLAGGPADSAPPSPAPA 162
Score = 29.3 bits (64), Expect = 7.3
Identities = 39/127 (30%), Positives = 45/127 (35%), Gaps = 28/127 (22%)
Query: 83 PLARSLPPESRRP---ARRANCPDSFRRVLVNHLAQKRSPTPARYKAVRLA-----ERER 134
P R PP + R + RA CP L + P R +A A ER+R
Sbjct: 52 PGNRHPPPPAARTHPGSCRARCPSP----AAGGLRGPWTAAPGRQRADEGAAAARPERQR 107
Query: 135 --EVRTPSGGAAPCV--------PDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPAP 184
R P AAP P P P R R L A AP P PAP
Sbjct: 108 VWARRLPGSAAAPAPGRDALRLPPPPPPPPERPRLPPAGLAGGPADSAP------PSPAP 161
Query: 185 PSRSKPA 191
RS+PA
Sbjct: 162 APRSRPA 168
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 45.8 bits (107), Expect = 8e-05
Identities = 94/411 (22%), Positives = 145/411 (35%), Gaps = 58/411 (14%)
Query: 2 PESPKAKISAVKERESEPKKMSTPTPTGPCLKLSCLPANPAP-----SFREAAMANVALG 56
P+SP+ K+ ES P +P PT S P +P P S RE + + +
Sbjct: 406 PKSPE-KLPQSSSSESSPP---SPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKN 461
Query: 57 LRRIKKKRRRERAGRKAGGDFRDLSLPLARSLPPESRRPARRANC----PDSFRRVLVNH 112
+ KR + + + R S A+ SR P +R + P R
Sbjct: 462 RSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQR 521
Query: 113 LAQKRSP-------TPARYKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLR 165
+ RSP +P R R +R R+ S PA R+R R P+ R
Sbjct: 522 WGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARR 581
Query: 166 ---RTLAPCAPAWPAPPPC--------PAPPSRSKPALAARQQPQRRAWAAAVATQCPHR 214
R+ P + P PA RS+ AR++ + R+ V + R
Sbjct: 582 GRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRS---PVRRRSRSR 638
Query: 215 APTQQHRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLPRGAQSSPLPGARASSFL 274
+P + R+GR T A R + ARR R+ R + G S P R S
Sbjct: 639 SPAR--RSGRSRSRTPARRGRSRSRTPARR--GRSRSRTPARRSGRSRSRTPARRGRSRS 694
Query: 275 PAPQHGAPLDVAHVPDSGPRAASAPARTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAH 334
P+ G R+ S R H+RT G + S RR
Sbjct: 695 RTPRRGR-----------SRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRS 743
Query: 335 TCPPPLPAASLAAGAERARLNLPFIPGPGGRARPRWSF---TAGAPEPPKR 382
P + + +++ R+ + P +A+ R S +G+ PK+
Sbjct: 744 NSSPEMKKSRISSRRSRS------LSSPRSKAKSRLSLRRSLSGSSPCPKQ 788
Score = 43.9 bits (102), Expect = 3e-04
Identities = 92/370 (24%), Positives = 133/370 (35%), Gaps = 59/370 (15%)
Query: 71 RKAGGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQKRSPTPARYKAVRLA 130
++AGG D P P+ +R + N S + + ++ + P A LA
Sbjct: 2150 QQAGGSMMDGPGPRI----PDHQRTSVPENHAQSRIALALTAISLGTARPPPSMSAAGLA 2205
Query: 131 EREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPA-WPAPPPCPAPPSRSK 189
R +V P P + APAA R P+ A A PA P
Sbjct: 2206 ARMSQVPAP----VPLMSLRTAPAANLASRIPAASAAAMNLASARTPAIPTAVNLADSRT 2261
Query: 190 PALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKDAARRLPNRN 249
PA AA A +A+ AP+ + A + + A+N R AA L +
Sbjct: 2262 PAAAA---------AMNLASPRTAVAPSAVNLADPRTPTAPAVNLAGARTPAA--LAALS 2310
Query: 250 LLRDLSLPRGAQ---SSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPARTPGHA 306
L + P A SS P A AS+ L P+ ++ S AA APA
Sbjct: 2311 LTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVNIAGSRTAAALAPASLTSAR 2370
Query: 307 RTRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLNLPFIPGPGGRA 366
A +G A L V A+ R T PP L +RAR P P +
Sbjct: 2371 MAPALSG--ANLTSPRVPLSAYERVSGRTSPPLL---------DRARSRTP----PSAPS 2415
Query: 367 RPRWSFTAGAPEPPKRV---PAQAVGAHGRCRRLFWWRLRVPGPVTPGSPRAACPGHHSE 423
+ R + + AP P R+ P+Q++ P PR+ P S+
Sbjct: 2416 QSRMT-SERAPSPSSRMGQAPSQSLL-----------------PPAQDQPRSPVPSAFSD 2457
Query: 424 QHNSRVAETT 433
Q +A+TT
Sbjct: 2458 QSRCLIAQTT 2467
Score = 42.4 bits (98), Expect = 8e-04
Identities = 83/355 (23%), Positives = 124/355 (34%), Gaps = 45/355 (12%)
Query: 60 IKKKRRRERAGRKAGGDFRDLSLPL----ARSLPPESRRPARRANCPDSFRR-------V 108
+ ++R R RA + R + P+ +RS P +RR +R P + RR V
Sbjct: 1906 VTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPV 1965
Query: 109 LVNHLAQKRSPTPARYKAVRLA----EREREVRTPSGGAAPCVPDEPAPAARTRRRDP-S 163
+ SP R R + R R +P P R+R R P +
Sbjct: 1966 TRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPA 2025
Query: 164 LRRTLAPCAPAWPAPPPCPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHR-- 221
+RR P P SRS+ LA R++ + R A + R+P R
Sbjct: 2026 IRRRSRSRTPL------LPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRS 2079
Query: 222 -AGRESGSTGAINQGRRRKDAARRLP----NRNLLRDLSLPRGAQSSPLPGARASSFL-P 275
+G S + + R + R P N + + S P +PL R+ L P
Sbjct: 2080 ASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRP-SMSPTPLDRCRSPGMLEP 2138
Query: 276 APQHGAPLDVAHVPDSGPRAASAPARTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHT 335
P+ V P R P H RT P + + + +L +
Sbjct: 2139 LGSSRTPMSVLQQAGGSMMDGPGP-RIPDHQRTSV---PENHAQSRIALALTAISLGTAR 2194
Query: 336 CPPPLPAASLAAGAERARLNLPFIPGPGGRARPRWSFTAGAPEPPKRVPAQAVGA 390
PP + AA LAA + +P P R TA A R+PA + A
Sbjct: 2195 PPPSMSAAGLAA-------RMSQVPAPVPLMSLR---TAPAANLASRIPAASAAA 2239
Score = 40.8 bits (94), Expect = 0.002
Identities = 63/282 (22%), Positives = 104/282 (36%), Gaps = 50/282 (17%)
Query: 56 GLRRIKKKRRRERAGRKAGGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQ 115
G R + RR R+ + R S L R SR P RR S R + +Q
Sbjct: 679 GRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQ 738
Query: 116 KRS---PTPARYKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTL---A 169
+RS +P K+ + R R + +P A + SLRR+L +
Sbjct: 739 RRSRSNSSPEMKKSRISSRRSRSLSSPRSKA---------------KSRLSLRRSLSGSS 783
Query: 170 PCAPAWPAPPPCPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGR----- 224
PC PP + S+P +R P+R +++ + + P++Q +
Sbjct: 784 PCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPK 843
Query: 225 -ESGS---TGAINQGRRRKDAA-----------------RRLPNRNLLRDLSLPRGAQSS 263
+SG+ G+I + + + R P+R+ S PR S+
Sbjct: 844 VKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSST 903
Query: 264 PLPGARASSFLPAPQHGA---PLDVAHVPDSGPRAASAPART 302
P + + S P P+ A P +H S P + +RT
Sbjct: 904 PPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRT 945
Score = 38.5 bits (88), Expect = 0.012
Identities = 86/392 (21%), Positives = 130/392 (33%), Gaps = 63/392 (16%)
Query: 19 PKKMSTPTPTGPCLKLSCLPANPAPSFREAAMANVALGLRR---------IKKKRRRERA 69
P+ ++ GP + P N A S AA+A +L R + R A
Sbjct: 2330 PQAPASANLVGPRSAHATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTSPRVPLSA 2389
Query: 70 GRKAGGDFRDLSLPLARS-----LPPESRRPARRANCPDS------FRRVLVNHLAQKRS 118
+ G L ARS P +SR + RA P S + +L Q RS
Sbjct: 2390 YERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRS 2449
Query: 119 PTPARYK---------------AVRLAEREREVRTPSGG--------AAPCVP--DEPAP 153
P P+ + + L+ T S G AP VP D P
Sbjct: 2450 PVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEP 2509
Query: 154 AARTRRRDPSLRRTLAPCAPAWPAPPPCPAPPSRSKPALAARQQPQRRAWA--------- 204
A T + PS L P + + S S + ++ + +
Sbjct: 2510 PASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLP 2569
Query: 205 -----AAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLPRG 259
A P AP + R GR T A R+R+ ++ + + S
Sbjct: 2570 VQPEVALKRVPSPTPAPKEAVREGRPPEPTPA---KRKRRSSSSSSSSSSSSSSSSSSSS 2626
Query: 260 AQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPARTPGHARTRAAAGPAAYLR 319
+ SS + +SS + +P P + P+ AS PG R+R+ P LR
Sbjct: 2627 SSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLR 2686
Query: 320 GLMVASLAWVRRHAHTCPPPLPAASLAAGAER 351
S + V R P P P ++ +ER
Sbjct: 2687 DSRSLSYSPVERR-RPSPQPSPRDQQSSSSER 2717
Score = 38.1 bits (87), Expect = 0.016
Identities = 57/276 (20%), Positives = 102/276 (36%), Gaps = 17/276 (6%)
Query: 4 SPKAKISAVKERESEPKKMSTPTPTGPCLKLSCLPANPAPSFREAAMANVALGLRRIKKK 63
SP+ K ++ S+P P P + LP G +
Sbjct: 1601 SPEVKDKPRAAPRAQSGSDSSPEPKAPAPR--ALPRRSRSGSSSKGRGPSPEGSSSTESS 1658
Query: 64 RRRERAGRKAGGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQKRSPTPAR 123
R A R P +S P RR +R + P+ R+ ++ ++ S +P
Sbjct: 1659 PEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSS--PELTRKARLSRRSRSASSSPE- 1715
Query: 124 YKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPA 183
R R R+PS + P E + ++R RR S R P+P P
Sbjct: 1716 ---TRSRTPPRHRRSPSVSSPE--PAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGL 1770
Query: 184 PPSRSKPALAARQQPQR--RAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKDA 241
SRS+ + +R R+ ++ ++ R+ ++ R G +G ++ R+++
Sbjct: 1771 QRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQES 1830
Query: 242 ARRLPNRNLLRDLSLPRG-----AQSSPLPGARASS 272
+R R R + P +++SP P R+ S
Sbjct: 1831 SRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRS 1866
Score = 36.6 bits (83), Expect = 0.046
Identities = 86/403 (21%), Positives = 139/403 (34%), Gaps = 59/403 (14%)
Query: 2 PESP----KAKISAVKERESEPKKMSTPTPTGPCLKLSCLPANPAPSFREAAMANVALGL 57
P SP K S ++++ + K+ S P+ + S P PAP+
Sbjct: 321 PSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPT------------- 367
Query: 58 RRIKKKRRRERAGRKAGGDFRDLSL-PLARSL--PPESRRPARRANCPDSFRRVLVNHLA 114
+ GG + L+ PL++ PP P R + P S ++ + +
Sbjct: 368 ---------PLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSS 418
Query: 115 QKRSPTPARYKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTR-----RRDPSLRRTLA 169
+ P+P K R A E P+ +P ++ R +RD S T
Sbjct: 419 ESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHT-- 476
Query: 170 PCAPAWPAPPPCPAPPSRSK---PALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRES 226
P + P A RS+ P + + W + + Q R+ + Q R S
Sbjct: 477 PSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRS 536
Query: 227 GSTGAINQGRRRKDAARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVA 286
+ R ++ RR +R+ R S R SP R+ S PA + + +
Sbjct: 537 PQRPGWS---RSRNTQRRGRSRSARRGRSHSR----SPATRGRSRSRTPARRGRSR---S 586
Query: 287 HVPDSGPRAASAPARTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLA 346
P + P R +RT A G + S RR + T P +
Sbjct: 587 RTPARRRSRSRTPTRRRSRSRTPARRGRS--------RSRTPARRRSRTRSPVRRRSRSR 638
Query: 347 AGAERARLNLPFIPGPGGRARPRWSFTAGAPEPPKRVPAQAVG 389
+ A R+ + P GR+R R G R PA+ G
Sbjct: 639 SPARRSGRSRSRTPARRGRSRSRTPARRGRSR--SRTPARRSG 679
Score = 35.4 bits (80), Expect = 0.10
Identities = 53/208 (25%), Positives = 80/208 (38%), Gaps = 37/208 (17%)
Query: 65 RRERAGRKAGGDFRDLSLPLARS---LPPESRRPARRANCPDSFRRVLVNHLAQKRSPTP 121
RR R+G + + P A+S PE + PA RA P RR ++ R P+P
Sbjct: 1594 RRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRA-LP---RRSRSGSSSKGRGPSP 1649
Query: 122 ARYKAVRLA-EREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPP 180
+ + E + RT G+ +P +T+ R P RR+
Sbjct: 1650 EGSSSTESSPEHPPKSRTARRGS------RSSPEPKTKSRTPPRRRS------------- 1690
Query: 181 CPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGA--INQGRRR 238
SRS P L + + RR+ +A+ + + R P + R+ S A RRR
Sbjct: 1691 -----SRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRR 1745
Query: 239 KDAARRLPNRNLLRDLS---LPRGAQSS 263
+ A+ R S PRG Q S
Sbjct: 1746 RSASSPRTKTTSRRGRSPSPKPRGLQRS 1773
Score = 31.2 bits (69), Expect = 1.9
Identities = 52/185 (28%), Positives = 68/185 (36%), Gaps = 34/185 (18%)
Query: 138 TPS----GGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPAPPSR--SKPA 191
TPS G++P + D P R PS R+ +P A P P P SR S P
Sbjct: 1453 TPSRHSLSGSSPGMKDIP--------RTPSRGRSECDSSPEPKALPQTPRPRSRSPSSPE 1504
Query: 192 L---AARQQPQRRAWAAAVATQCPHRAPT-QQHRAGRESG---STGAINQGRRRKD---- 240
L Q +R ++V + R P Q+ R+G A Q R D
Sbjct: 1505 LNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPD 1564
Query: 241 --AARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASA 298
A R P R R S P S L R+ S G+ +V P + PRA S
Sbjct: 1565 SKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRS-------GSSPEVKDKPRAAPRAQSG 1617
Query: 299 PARTP 303
+P
Sbjct: 1618 SDSSP 1622
Score = 31.2 bits (69), Expect = 1.9
Identities = 36/178 (20%), Positives = 68/178 (38%), Gaps = 8/178 (4%)
Query: 87 SLPPESRRPARRANCPDSFRRVLVNHLAQKRSPTPARYKAVRLAEREREVRTPSGGAAPC 146
SLP + +R P + V + PTPA+ K + + S ++
Sbjct: 2567 SLPVQPEVALKRVPSPTPAPKEAVRE-GRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSS 2625
Query: 147 VPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPAPPSRSKPALAARQ-QPQRRAWAA 205
+ ++ + S + +P +PA P P P P S KP R+ + R+ +
Sbjct: 2626 SSSSSSSSSSSSSSSSSSSSSSSP-SPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDS 2684
Query: 206 AVATQCPHRAPTQQHR-----AGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLPR 258
++ +P ++ R + R+ S+ + RR + R P+ R+ PR
Sbjct: 2685 LRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRRRETPSPR 2742
Score = 30.0 bits (66), Expect = 4.3
Identities = 78/373 (20%), Positives = 134/373 (35%), Gaps = 51/373 (13%)
Query: 61 KKKRRRERAGRKAGGDFRDLSLPLARSLPPESRRPARRANCPDSFRRVLVNHLAQKRSPT 120
+KK R RA + D S + E+++PA P S LV + RSPT
Sbjct: 129 EKKNERLRAAFGISDSYVDGSSFDPQRRAREAKQPAPEPPKPYS----LVRESSSSRSPT 184
Query: 121 PARYKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPP 180
P + K + +R R + S R R+ S ++ + +
Sbjct: 185 PKQKKKKKKKDRGRRSESSS--------------PRRERKKSSKKKKHRSESESKKRKHR 230
Query: 181 CPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKD 240
P P S+ K +++ + R+ A ++ HR+ +S S+ ++ R R
Sbjct: 231 SPTPKSKRKS--KDKKRKRSRSTTPAPKSRRAHRS------TSADSASSSDTSRSRSRSA 282
Query: 241 AARRLPNRNLLRD---LSLPRGAQSSPL--PGARASSFLPAPQHGAPLDVAHVPDSGPRA 295
AA+ R S RG +P PG ++ +P+ + D
Sbjct: 283 AAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDK 342
Query: 296 ASAPARTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLN 355
A P + R++ GP ++A RH + P PL L+ + +N
Sbjct: 343 KEKSATRPSPSPERSSTGPEPPAPTPLLA-----ERHGGS-PQPLATTPLS----QEPVN 392
Query: 356 LPFIPGPGGRARPRWSFTAGAPEPPKRVPAQAVGAHGRCRRLFWWRLRVPGPVTPGSPR- 414
P P P P+ P+++P Q+ + ++ +P SP+
Sbjct: 393 PPSEASPTRDRSP--------PKSPEKLP-QSSSSESSPPSPQPTKVSRHASSSPESPKP 443
Query: 415 AACPGHHSEQHNS 427
A PG H E +S
Sbjct: 444 APAPGSHREISSS 456
Score = 29.3 bits (64), Expect = 7.3
Identities = 66/312 (21%), Positives = 97/312 (31%), Gaps = 34/312 (10%)
Query: 89 PPESRRPARRANCPDSFRRVLVNHLAQKRSPTPARYKAVRLAEREREVRTP-----SGGA 143
P E R +RR S R + + SP P + R R + RT SG +
Sbjct: 1735 PAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSS 1794
Query: 144 APCVPDEPAPAARTR------------RRDPSLR---RTLAPCAPAWPAPPPCPAPPSRS 188
+R+R R P+ + RT + PP SRS
Sbjct: 1795 QSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRS 1854
Query: 189 KPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRKDAARRLP-- 246
+ + A ++ + RA + A + R P R R S + + R R RR
Sbjct: 1855 RTSPAPWKRSRSRA-SPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRS 1913
Query: 247 -------NRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAP 299
R+ R + R S P R S P + P R + +
Sbjct: 1914 RASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSR 1973
Query: 300 ARTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLA----AGAERARLN 355
R+R+ P R S RR P S + A R+R
Sbjct: 1974 TSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSR 2033
Query: 356 LPFIPGPGGRAR 367
P +P R+R
Sbjct: 2034 TPLLPRKRSRSR 2045
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 45.1 bits (105), Expect = 1e-04
Identities = 38/127 (29%), Positives = 54/127 (42%), Gaps = 24/127 (18%)
Query: 151 PAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPAPPSRSKPALAARQQPQRRAWAAAVATQ 210
P+P R RRR LR P AP+ P PA P+R++P ++ ++RA A A
Sbjct: 37 PSPVGRARRRGTWLRVLRGPRAPS-----PAPALPARARPP----RENRKRAVPARAA-- 85
Query: 211 CPHRAPTQQHRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLPRGAQSSPLPGARA 270
R P ++ G+ G A + R + RR P P + P PG R
Sbjct: 86 ---RGPPKRPAGGQTGGVEAASGEERSQPRRPRRPP----------PAPRRPRPAPGRRK 132
Query: 271 SSFLPAP 277
S + AP
Sbjct: 133 SLYEAAP 139
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 45.1 bits (105), Expect = 1e-04
Identities = 38/127 (29%), Positives = 54/127 (42%), Gaps = 24/127 (18%)
Query: 151 PAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPAPPSRSKPALAARQQPQRRAWAAAVATQ 210
P+P R RRR LR P AP+ P PA P+R++P ++ ++RA A A
Sbjct: 37 PSPVGRARRRGTWLRVLRGPRAPS-----PAPALPARARPP----RENRKRAVPARAA-- 85
Query: 211 CPHRAPTQQHRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLPRGAQSSPLPGARA 270
R P ++ G+ G A + R + RR P P + P PG R
Sbjct: 86 ---RGPPKRPAGGQTGGVEAASGEERSQPRRPRRPP----------PAPRRPRPAPGRRK 132
Query: 271 SSFLPAP 277
S + AP
Sbjct: 133 SLYEAAP 139
>gi|169163019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 45.1 bits (105), Expect = 1e-04
Identities = 38/127 (29%), Positives = 54/127 (42%), Gaps = 24/127 (18%)
Query: 151 PAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPAPPSRSKPALAARQQPQRRAWAAAVATQ 210
P+P R RRR LR P AP+ P PA P+R++P ++ ++RA A A
Sbjct: 37 PSPVGRARRRGTWLRVLRGPRAPS-----PAPALPARARPP----RENRKRAVPARAA-- 85
Query: 211 CPHRAPTQQHRAGRESGSTGAINQGRRRKDAARRLPNRNLLRDLSLPRGAQSSPLPGARA 270
R P ++ G+ G A + R + RR P P + P PG R
Sbjct: 86 ---RGPPKRPAGGQTGGVEAASGEERSQPRRPRRPP----------PAPRRPRPAPGRRK 132
Query: 271 SSFLPAP 277
S + AP
Sbjct: 133 SLYEAAP 139
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 45.1 bits (105), Expect = 1e-04
Identities = 68/284 (23%), Positives = 99/284 (34%), Gaps = 41/284 (14%)
Query: 131 EREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPAP------ 184
ER E G + P P A R P P AP P PPP P
Sbjct: 368 ERPPEADGKKGNSPNSEPPTPKTAWAETSRPPETEP--GPPAPKPPLPPPHRGPAGNWGP 425
Query: 185 ----PSRSKPAL----------AARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTG 230
P R P A RQ+ ++ + ++A + R ++ R +E
Sbjct: 426 PGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEERRMQEE-RRA 484
Query: 231 AINQGRRRKDAARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVAHVPD 290
A + +R D P++ L + + P A S+P P LPAP P A P+
Sbjct: 485 ACAEKLKRLDEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPAPPAPPPAS-APTPE 543
Query: 291 SGPR--AASAPAR---TPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASL 345
+ P A + PA+ TPG AA P G +S + A P LP+
Sbjct: 544 TEPEEPAQAPPAQSTPTPG-----VAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSKEG 598
Query: 346 AAGAERARLNLPFIPGPGGRARPRWSFTAGAPEPPKRVPAQAVG 389
E +P P P+ P ++ P+Q +G
Sbjct: 599 PEPPEE-------VPPPTTPPVPKVEPKGDGIGPTRQPPSQGLG 635
Score = 37.4 bits (85), Expect = 0.027
Identities = 45/165 (27%), Positives = 59/165 (35%), Gaps = 37/165 (22%)
Query: 68 RAGRKAGGDFRDLSLPLARSLPPESRR---PARRANCPDSFRRVLVNHLAQKRSPTPARY 124
R RK L++ AR E R RRA C + +R L +K R
Sbjct: 450 RQRRKQSSSEISLAVERARRRREEEERRMQEERRAACAEKLKR-----LDEKFGAPDKRL 504
Query: 125 KAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPAP 184
KA A P P PAP P++ + L PA PAPPP AP
Sbjct: 505 KA-------------EPAAPPAAPSTPAPP-------PAVPKEL----PAPPAPPPASAP 540
Query: 185 PSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGST 229
++P A+ P + VA APT G S ++
Sbjct: 541 TPETEPEEPAQAPPAQSTPTPGVAA-----APTLVSGGGSTSSTS 580
Score = 33.5 bits (75), Expect = 0.39
Identities = 64/287 (22%), Positives = 86/287 (29%), Gaps = 64/287 (22%)
Query: 122 ARYKAVRLAEREREVRTPS----GGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPA 177
+ Y+ + R+R T S AP + P P T T P AP P
Sbjct: 1092 SEYEEIPKRRRQRGSETGSETHESDLAPSDKEAPTPKEGTL--------TQVPLAPPPPG 1143
Query: 178 PPPCPAP---PSRSKPALAARQQPQRR-------------AWAAAVATQCPHRAPTQQHR 221
PP PAP +R R P RR W+ + P + PT
Sbjct: 1144 APPSPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQVCPGWSPPAKSLAPKKPPTGPLP 1203
Query: 222 AGRE----------------SGSTGAINQG--------RRRKDAARRLPNRNLLRDLSLP 257
+E GS G N G RRR A++ R L
Sbjct: 1204 PSKEPLKEKLIPGPLSPVARGGSNGGSNVGMEDGERPRRRRHGRAQQQDKPPRFRRLKQE 1263
Query: 258 RGAQSSPLPGARASSFLPAPQHGAPLDVAHVPDSGPRAASAPARTPGHARTRAAAGPAAY 317
R + G + S LPA G P + P A A++P + + +
Sbjct: 1264 RENAARGSEG-KPSLTLPASAPG-PEEALTTVTVAPAPRRAAAKSPDLSNQNSDQANEEW 1321
Query: 318 LRGLMVASLAWVRRHAHTCPPPLPAASLAAGAERARLNLPFIPGPGG 364
+ RR PPP+ A G PG GG
Sbjct: 1322 ETASESSDFTSERRGDKEAPPPVLLTPKAVGT----------PGGGG 1358
>gi|71274152 hypothetical protein LOC388939 [Homo sapiens]
Length = 1288
Score = 45.1 bits (105), Expect = 1e-04
Identities = 92/372 (24%), Positives = 129/372 (34%), Gaps = 70/372 (18%)
Query: 6 KAKISAVKERESEPKK-MSTPTPTGPCLKLSCLPA---NPAPSFREAAMANVALGLRRIK 61
K+ S K + P S+ P P L LS PA +P + A A L R
Sbjct: 895 KSTASLTKPHSTGPGSGRSSCQPRKPALDLSSPPATSQSPEVKGGTWSQAEKATSLYRQP 954
Query: 62 KKRRRERAGRKAGGDFRDLSLPLARSLPPESRRP--ARRANCPDSFRRVLVNHLAQKRSP 119
+K G R LAR R P R+A+ R V ++R
Sbjct: 955 RKAIAWHHSGPPSGQNRTSESSLARPRQSRERSPPVGRKAS---PTRTHWVPQADKRRRS 1011
Query: 120 TPARYKAVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPP 179
P+ Y+ + PS A P P + R + RRT P P P PP
Sbjct: 1012 LPSSYRPAQ----------PSPSAVQTPPSPPV-SPRVLSPPTTKRRTSPPHQPKLPNPP 1060
Query: 180 PCPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGSTGAINQGRRRK 239
P AP P+ Q P+ ++ + P +P+Q+H+ R+S + A+
Sbjct: 1061 PESAPAQCKVPS-PPTQHPEASP-PFSIPSPSPPMSPSQEHKETRDSEDSQAV------- 1111
Query: 240 DAARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVAH--VPDSGPRAAS 297
++ G S A +S F P PL AH P S P A
Sbjct: 1112 --------------IAKVSGNTHSIFCPATSSLFEAKP----PLSTAHPLTPPSLPPEAG 1153
Query: 298 APARTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCP-PPLPAASLAAGAERARLNL 356
P P + ++GP +LR A +R A C PLP A +
Sbjct: 1154 GPLGNPAEC-WKNSSGP--WLR-------ADSQRRAALCALNPLPFLRRTASDRQ----- 1198
Query: 357 PFIPGPGGRARP 368
PGGR +P
Sbjct: 1199 -----PGGRPQP 1205
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 44.7 bits (104), Expect = 2e-04
Identities = 75/309 (24%), Positives = 103/309 (33%), Gaps = 31/309 (10%)
Query: 126 AVRLAEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPP----- 180
AVR++ E + P P PA A T P +PA PPP
Sbjct: 991 AVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEE---------PTSPAAAVPPPEEPTS 1041
Query: 181 ----CPAPPSRSKPALAARQQPQRRAWAAAVATQCPHRAPTQQHRAGRESGS-TGAINQG 235
P P + PA A + + AAAV T +P E S A+
Sbjct: 1042 PAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTP 1101
Query: 236 RRRKDAARRLPNRNLLRDLSLPRGAQSSPLPGARASSFLPAPQHGA-PLDVAHVPDSGPR 294
A +P + + P A +P A ++ +P P+ A P P+
Sbjct: 1102 EEPTSPAAAVPTP---EEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEESAS 1158
Query: 295 AASAPARTPGHARTRAAAGPAAYLRGLMVASLAWVRR-HAHTCPPPLPAASLAAGAE--R 351
AA A TP + + AAA P A +A + + P PAA +A E
Sbjct: 1159 AAVA-VPTPEESASPAAAVPTPAESASFAAVVATLEEPTSPAASVPTPAAMVATLEEFTS 1217
Query: 352 ARLNLPFIPGPGGRA----RPRWSFTAGAPEPPKRVPAQAVGAHGRCRRLFWWRLRVPGP 407
++P P A P + A P P + A L VP P
Sbjct: 1218 PAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEELSSPAASVPTP 1277
Query: 408 VTPGSPRAA 416
P SP AA
Sbjct: 1278 EEPASPAAA 1286
Score = 32.0 bits (71), Expect = 1.1
Identities = 66/282 (23%), Positives = 100/282 (35%), Gaps = 18/282 (6%)
Query: 119 PTPARYKAVRLAEREREVRTPSGGAAPCVPDEP-APAARTRRRDPSLRRTLAPCAPAWPA 177
PTP + A E T A P P+EP +PAA + A P PA
Sbjct: 1073 PTPEEPTSPAAAVPTPEEPTSPAAAVP-TPEEPTSPAAAVPTPEEPASPAAAVPTPEEPA 1131
Query: 178 PPPCPAPPSRSKPALAARQQPQ-RRAWAAAVATQCPHR--APTQQHRAGRESGSTGAINQ 234
P A P+ +PA A P + +AAVA P +P ES S A+
Sbjct: 1132 SPAA-AVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVPTPAESASFAAVVA 1190
Query: 235 GRRRKDA-ARRLPNR----NLLRDLSLPRGAQSSPLPGARASSFLPAPQHGAPLDVAHVP 289
+ A +P L + + P + + A ++ + P+ A
Sbjct: 1191 TLEEPTSPAASVPTPAAMVATLEEFTSPAASVPTSEEPASLAAAVSNPEEPTSPAAAVPT 1250
Query: 290 DSGPRAASAPARTPGHARTRAAAGPAAYLRGLMVASLAWVRRHAHTCPPPLPAASLAAGA 349
P +++A TP + AA+ P A+++ + P PAA++
Sbjct: 1251 LEEPTSSAAAVLTPEELSSPAASVPTPEEPASPAAAVSNLEE------PASPAAAVPT-P 1303
Query: 350 ERARLNLPFIPGPGGRARPRWSFTAGAPEPPKRVPAQAVGAH 391
E A + +P P A P + P VP V AH
Sbjct: 1304 EVAAIPAASVPTPEVPAIPAAAVPPMEEVSPIGVPFLGVSAH 1345
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.131 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,939,470
Number of Sequences: 37866
Number of extensions: 1468224
Number of successful extensions: 15833
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 1057
Number of HSP's that attempted gapping in prelim test: 11242
Number of HSP's gapped (non-prelim): 4108
length of query: 435
length of database: 18,247,518
effective HSP length: 105
effective length of query: 330
effective length of database: 14,271,588
effective search space: 4709624040
effective search space used: 4709624040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.