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Search of human proteins with 239742769
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742769 PREDICTED: hypothetical protein XP_002342619 [Homo
sapiens]
(351 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239742769 PREDICTED: hypothetical protein XP_002342619 [Homo ... 755 0.0
gi|239740980 PREDICTED: hypothetical protein XP_002344293 [Homo ... 462 e-130
gi|239753062 PREDICTED: hypothetical protein [Homo sapiens] 421 e-118
gi|169171432 PREDICTED: similar to hCG2014367 [Homo sapiens] 401 e-112
gi|169171899 PREDICTED: similar to hCG2014367 [Homo sapiens] 401 e-112
gi|169171130 PREDICTED: hypothetical protein LOC100130600 [Homo ... 401 e-112
gi|239509024 PREDICTED: similar to hCG2014367 [Homo sapiens] 401 e-112
gi|239747616 PREDICTED: similar to hCG1996386 [Homo sapiens] 341 5e-94
gi|169162775 PREDICTED: similar to hCG1996386 [Homo sapiens] 341 5e-94
gi|169172340 PREDICTED: hypothetical protein LOC442676 [Homo sap... 214 9e-56
gi|169170016 PREDICTED: hypothetical protein LOC442676 [Homo sap... 214 9e-56
gi|239508816 PREDICTED: hypothetical protein LOC442676 [Homo sap... 214 9e-56
gi|169171742 PREDICTED: hypothetical protein LOC442676 [Homo sap... 212 5e-55
gi|112421108 capicua homolog [Homo sapiens] 197 2e-50
gi|217035121 HMG-BOX transcription factor BBX isoform 1 [Homo sa... 41 0.002
gi|18378731 HMG-BOX transcription factor BBX isoform 2 [Homo sap... 41 0.002
gi|65508004 Wilms tumor 1 isoform D [Homo sapiens] 40 0.002
gi|65507908 Wilms tumor 1 isoform C [Homo sapiens] 40 0.002
gi|65507817 Wilms tumor 1 isoform B [Homo sapiens] 40 0.002
gi|65507714 Wilms tumor 1 isoform A [Homo sapiens] 40 0.002
gi|160707881 formin 2 [Homo sapiens] 40 0.003
gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo sapi... 40 0.004
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 39 0.005
gi|226437579 NAC alpha domain containing [Homo sapiens] 38 0.012
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] 38 0.012
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] 38 0.012
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] 38 0.012
gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens] 38 0.012
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 37 0.020
gi|23957680 ral guanine nucleotide dissociation stimulator-like ... 37 0.035
>gi|239742769 PREDICTED: hypothetical protein XP_002342619 [Homo
sapiens]
Length = 351
Score = 755 bits (1950), Expect = 0.0
Identities = 351/351 (100%), Positives = 351/351 (100%)
Query: 1 MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ 60
MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ
Sbjct: 1 MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ 60
Query: 61 AQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR 120
AQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR
Sbjct: 61 AQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR 120
Query: 121 TVSQMLSERWYTLGPNEMQKYNLAFQVKVAHLQQGPKEVQLRGQAHKPGASRSSSDTKEQ 180
TVSQMLSERWYTLGPNEMQKYNLAFQVKVAHLQQGPKEVQLRGQAHKPGASRSSSDTKEQ
Sbjct: 121 TVSQMLSERWYTLGPNEMQKYNLAFQVKVAHLQQGPKEVQLRGQAHKPGASRSSSDTKEQ 180
Query: 181 LLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTASYSGPKPSTQ 240
LLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTASYSGPKPSTQ
Sbjct: 181 LLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTASYSGPKPSTQ 240
Query: 241 HGAPGHFAAPGEGGDPWAALLPPTVPRSTCSFWQSMVTPCPPPTRTRMLPPQPWHPPPSY 300
HGAPGHFAAPGEGGDPWAALLPPTVPRSTCSFWQSMVTPCPPPTRTRMLPPQPWHPPPSY
Sbjct: 241 HGAPGHFAAPGEGGDPWAALLPPTVPRSTCSFWQSMVTPCPPPTRTRMLPPQPWHPPPSY 300
Query: 301 WAQEPSKPRSLVNAAERAPYGPNPWGWGPRDAFQGGLFPPNGSCHLLVQET 351
WAQEPSKPRSLVNAAERAPYGPNPWGWGPRDAFQGGLFPPNGSCHLLVQET
Sbjct: 301 WAQEPSKPRSLVNAAERAPYGPNPWGWGPRDAFQGGLFPPNGSCHLLVQET 351
>gi|239740980 PREDICTED: hypothetical protein XP_002344293 [Homo
sapiens]
Length = 616
Score = 462 bits (1189), Expect = e-130
Identities = 229/263 (87%), Positives = 232/263 (88%), Gaps = 14/263 (5%)
Query: 1 MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ 60
MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ
Sbjct: 45 MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ 104
Query: 61 AQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR 120
SLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR
Sbjct: 105 --SLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR 162
Query: 121 TVSQMLSERWYTLGPNEMQKYNLAFQVKVAHLQQGPKEVQLRGQAHKPGASR-------- 172
TVSQMLSERWYTLGPNEMQKYNLAFQ + + + G A PG S
Sbjct: 163 TVSQMLSERWYTLGPNEMQKYNLAFQ--ECNKGSWERSISETGTATAPGVSSELLSVAAQ 220
Query: 173 --SSSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTA 230
SSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTA
Sbjct: 221 TLQSSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTA 280
Query: 231 SYSGPKPSTQHGAPGHFAAPGEG 253
SYSGPKPSTQHGAPGHFAAPGEG
Sbjct: 281 SYSGPKPSTQHGAPGHFAAPGEG 303
>gi|239753062 PREDICTED: hypothetical protein [Homo sapiens]
Length = 811
Score = 421 bits (1083), Expect = e-118
Identities = 213/265 (80%), Positives = 222/265 (83%), Gaps = 18/265 (6%)
Query: 1 MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ 60
MFVWRNVEGHS AVF WYSIPFLTPPCSH RPS LPVTQWPPTRENNLPSWQ LLMSVHQ
Sbjct: 238 MFVWRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQ 297
Query: 61 AQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR 120
SLSALRKEQDSSSEKDGRSPNK DKDHI WPMSG+H+LQQAAPGPG AHQGHPNQDNR
Sbjct: 298 --SLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNR 355
Query: 121 TVSQMLSERWYTLGPNEMQKYNLAFQVKVAHLQQGPKE--VQLRGQAHKPGASR------ 172
T+SQMLSE+WYTLGPNEMQKY+LAFQ +G E + G A PG S
Sbjct: 356 TISQMLSEQWYTLGPNEMQKYDLAFQ----ECNKGSWEWSISEMGTATAPGVSSELLSVA 411
Query: 173 ----SSSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSG 228
SSDTKEQLLWGRTAAHSQ TWLSLAQAFSHSGVHSLDGREIDRQAL+ELTQVVSG
Sbjct: 412 AQTLQSSDTKEQLLWGRTAAHSQETWLSLAQAFSHSGVHSLDGREIDRQALQELTQVVSG 471
Query: 229 TASYSGPKPSTQHGAPGHFAAPGEG 253
TASYSGPKPSTQ+GAPGHFAAP G
Sbjct: 472 TASYSGPKPSTQYGAPGHFAAPAFG 496
>gi|169171432 PREDICTED: similar to hCG2014367 [Homo sapiens]
Length = 594
Score = 401 bits (1031), Expect = e-112
Identities = 207/264 (78%), Positives = 215/264 (81%), Gaps = 15/264 (5%)
Query: 1 MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ 60
MFVWRNVE S AVFSWYS+PFLTPPCS+ R SNLPVTQWPPTR NLPS Q LLMSVHQ
Sbjct: 21 MFVWRNVEPCSVAVFSWYSVPFLTPPCSYVRSSNLPVTQWPPTRAKNLPSQQLLLMSVHQ 80
Query: 61 AQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR 120
SLSALRKEQDSSSEKDG SPNK DKDHIRWPMSG HDLQQAAPGPG AHQGHPNQDNR
Sbjct: 81 --SLSALRKEQDSSSEKDGCSPNKWDKDHIRWPMSGGHDLQQAAPGPGRAHQGHPNQDNR 138
Query: 121 TVSQMLSERWYTLGPNEMQKY-NLAFQVKVAHLQQGPKEVQLRGQAHKPGASR------- 172
TVSQMLS+RWYTLGPNE QKY +LAFQ + + + G A PG S
Sbjct: 139 TVSQMLSKRWYTLGPNETQKYHDLAFQ--ECNKGSWERRISETGTATAPGVSSELLSVAA 196
Query: 173 ---SSSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGT 229
SSDTKEQLLWGR AAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGT
Sbjct: 197 QTLQSSDTKEQLLWGRMAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGT 256
Query: 230 ASYSGPKPSTQHGAPGHFAAPGEG 253
ASYSGPKPSTQ+GAPGHFAAP G
Sbjct: 257 ASYSGPKPSTQYGAPGHFAAPAFG 280
>gi|169171899 PREDICTED: similar to hCG2014367 [Homo sapiens]
Length = 594
Score = 401 bits (1031), Expect = e-112
Identities = 207/264 (78%), Positives = 215/264 (81%), Gaps = 15/264 (5%)
Query: 1 MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ 60
MFVWRNVE S AVFSWYS+PFLTPPCS+ R SNLPVTQWPPTR NLPS Q LLMSVHQ
Sbjct: 21 MFVWRNVEPCSVAVFSWYSVPFLTPPCSYVRSSNLPVTQWPPTRAKNLPSQQLLLMSVHQ 80
Query: 61 AQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR 120
SLSALRKEQDSSSEKDG SPNK DKDHIRWPMSG HDLQQAAPGPG AHQGHPNQDNR
Sbjct: 81 --SLSALRKEQDSSSEKDGCSPNKWDKDHIRWPMSGGHDLQQAAPGPGRAHQGHPNQDNR 138
Query: 121 TVSQMLSERWYTLGPNEMQKY-NLAFQVKVAHLQQGPKEVQLRGQAHKPGASR------- 172
TVSQMLS+RWYTLGPNE QKY +LAFQ + + + G A PG S
Sbjct: 139 TVSQMLSKRWYTLGPNETQKYHDLAFQ--ECNKGSWERRISETGTATAPGVSSELLSVAA 196
Query: 173 ---SSSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGT 229
SSDTKEQLLWGR AAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGT
Sbjct: 197 QTLQSSDTKEQLLWGRMAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGT 256
Query: 230 ASYSGPKPSTQHGAPGHFAAPGEG 253
ASYSGPKPSTQ+GAPGHFAAP G
Sbjct: 257 ASYSGPKPSTQYGAPGHFAAPAFG 280
>gi|169171130 PREDICTED: hypothetical protein LOC100130600 [Homo
sapiens]
Length = 594
Score = 401 bits (1031), Expect = e-112
Identities = 207/264 (78%), Positives = 215/264 (81%), Gaps = 15/264 (5%)
Query: 1 MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ 60
MFVWRNVE S AVFSWYS+PFLTPPCS+ R SNLPVTQWPPTR NLPS Q LLMSVHQ
Sbjct: 21 MFVWRNVEPCSVAVFSWYSVPFLTPPCSYVRSSNLPVTQWPPTRAKNLPSQQLLLMSVHQ 80
Query: 61 AQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR 120
SLSALRKEQDSSSEKDG SPNK DKDHIRWPMSG HDLQQAAPGPG AHQGHPNQDNR
Sbjct: 81 --SLSALRKEQDSSSEKDGCSPNKWDKDHIRWPMSGGHDLQQAAPGPGRAHQGHPNQDNR 138
Query: 121 TVSQMLSERWYTLGPNEMQKY-NLAFQVKVAHLQQGPKEVQLRGQAHKPGASR------- 172
TVSQMLS+RWYTLGPNE QKY +LAFQ + + + G A PG S
Sbjct: 139 TVSQMLSKRWYTLGPNETQKYHDLAFQ--ECNKGSWERRISETGTATAPGVSSELLSVAA 196
Query: 173 ---SSSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGT 229
SSDTKEQLLWGR AAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGT
Sbjct: 197 QTLQSSDTKEQLLWGRMAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGT 256
Query: 230 ASYSGPKPSTQHGAPGHFAAPGEG 253
ASYSGPKPSTQ+GAPGHFAAP G
Sbjct: 257 ASYSGPKPSTQYGAPGHFAAPAFG 280
>gi|239509024 PREDICTED: similar to hCG2014367 [Homo sapiens]
Length = 594
Score = 401 bits (1031), Expect = e-112
Identities = 207/264 (78%), Positives = 215/264 (81%), Gaps = 15/264 (5%)
Query: 1 MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ 60
MFVWRNVE S AVFSWYS+PFLTPPCS+ R SNLPVTQWPPTR NLPS Q LLMSVHQ
Sbjct: 21 MFVWRNVEPCSVAVFSWYSVPFLTPPCSYVRSSNLPVTQWPPTRAKNLPSQQLLLMSVHQ 80
Query: 61 AQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR 120
SLSALRKEQDSSSEKDG SPNK DKDHIRWPMSG HDLQQAAPGPG AHQGHPNQDNR
Sbjct: 81 --SLSALRKEQDSSSEKDGCSPNKWDKDHIRWPMSGGHDLQQAAPGPGRAHQGHPNQDNR 138
Query: 121 TVSQMLSERWYTLGPNEMQKY-NLAFQVKVAHLQQGPKEVQLRGQAHKPGASR------- 172
TVSQMLS+RWYTLGPNE QKY +LAFQ + + + G A PG S
Sbjct: 139 TVSQMLSKRWYTLGPNETQKYHDLAFQ--ECNKGSWERRISETGTATAPGVSSELLSVAA 196
Query: 173 ---SSSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGT 229
SSDTKEQLLWGR AAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGT
Sbjct: 197 QTLQSSDTKEQLLWGRMAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGT 256
Query: 230 ASYSGPKPSTQHGAPGHFAAPGEG 253
ASYSGPKPSTQ+GAPGHFAAP G
Sbjct: 257 ASYSGPKPSTQYGAPGHFAAPAFG 280
>gi|239747616 PREDICTED: similar to hCG1996386 [Homo sapiens]
Length = 441
Score = 341 bits (875), Expect = 5e-94
Identities = 160/173 (92%), Positives = 165/173 (95%)
Query: 1 MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ 60
MFVWRNVEGHS AVF WYSIPFLTPPCSH RPS LPVTQWPPTRENNLPSWQ LLMSVHQ
Sbjct: 1 MFVWRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQ 60
Query: 61 AQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR 120
AQSLSALRKEQDSSSEKDGRSPNK DKDHI WPMSG+H+LQQAAPGPG AHQGHPNQDNR
Sbjct: 61 AQSLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNR 120
Query: 121 TVSQMLSERWYTLGPNEMQKYNLAFQVKVAHLQQGPKEVQLRGQAHKPGASRS 173
T+SQMLSE+WYTLGPNEMQKY+LAFQVKVAHLQQGPKEVQLRGQAHKPGASRS
Sbjct: 121 TISQMLSEQWYTLGPNEMQKYDLAFQVKVAHLQQGPKEVQLRGQAHKPGASRS 173
>gi|169162775 PREDICTED: similar to hCG1996386 [Homo sapiens]
Length = 441
Score = 341 bits (875), Expect = 5e-94
Identities = 160/173 (92%), Positives = 165/173 (95%)
Query: 1 MFVWRNVEGHSAAVFSWYSIPFLTPPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQ 60
MFVWRNVEGHS AVF WYSIPFLTPPCSH RPS LPVTQWPPTRENNLPSWQ LLMSVHQ
Sbjct: 1 MFVWRNVEGHSVAVFPWYSIPFLTPPCSHMRPSKLPVTQWPPTRENNLPSWQLLLMSVHQ 60
Query: 61 AQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNR 120
AQSLSALRKEQDSSSEKDGRSPNK DKDHI WPMSG+H+LQQAAPGPG AHQGHPNQDNR
Sbjct: 61 AQSLSALRKEQDSSSEKDGRSPNKWDKDHIWWPMSGSHNLQQAAPGPGRAHQGHPNQDNR 120
Query: 121 TVSQMLSERWYTLGPNEMQKYNLAFQVKVAHLQQGPKEVQLRGQAHKPGASRS 173
T+SQMLSE+WYTLGPNEMQKY+LAFQVKVAHLQQGPKEVQLRGQAHKPGASRS
Sbjct: 121 TISQMLSEQWYTLGPNEMQKYDLAFQVKVAHLQQGPKEVQLRGQAHKPGASRS 173
>gi|169172340 PREDICTED: hypothetical protein LOC442676 [Homo
sapiens]
Length = 679
Score = 214 bits (545), Expect = 9e-56
Identities = 139/291 (47%), Positives = 153/291 (52%), Gaps = 44/291 (15%)
Query: 25 PPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQAQSLSALRKEQDSSSEKDGRSPNK 84
P HT P PPT E W P AQSLSALRKEQDSSS+KDG SPNK
Sbjct: 289 PGTPHTLGVVEPGKSPPPTMEEE--PWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNK 346
Query: 85 SDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRTVSQMLSERWYTLGPNEMQKY-NL 143
DKDHIRWPMSG H+LQQAAPG G AHQGHPNQDN TVSQ+LS+RWYTLGPNE QKY +L
Sbjct: 347 WDKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDL 406
Query: 144 AFQVKVAHLQQGPKEVQLRGQAHKPGASRSSSDTKEQLLWGRTAAHSQGTWLSLAQAFSH 203
AFQVKVAHLQQGPKEVQLRGQAHKPGASR+ QG ++ S
Sbjct: 407 AFQVKVAHLQQGPKEVQLRGQAHKPGASRT----------------VQGLHMASEDTASD 450
Query: 204 SG---VHSLDG--REIDRQALRELTQVVSGTASYSGPKPSTQHGAPGHFAAP-------- 250
+H +G + AL LT + S + P P H F P
Sbjct: 451 EEPMVIHEEEGVTMSLLMMALAPLTLISSSRSHSRPPGPLCTHPPLQGFFCPCPDSQPCG 510
Query: 251 -----GEGGDPWAALLPPTVPRSTCSFWQSMVTPCPPPTRTRMLPPQPWHP 296
G D AAL P +P PC P QPW P
Sbjct: 511 GPDPTSPGSDSDAALDAPPLPLPESH-------PCLTPPHPAQALVQPWLP 554
>gi|169170016 PREDICTED: hypothetical protein LOC442676 [Homo
sapiens]
Length = 679
Score = 214 bits (545), Expect = 9e-56
Identities = 139/291 (47%), Positives = 153/291 (52%), Gaps = 44/291 (15%)
Query: 25 PPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQAQSLSALRKEQDSSSEKDGRSPNK 84
P HT P PPT E W P AQSLSALRKEQDSSS+KDG SPNK
Sbjct: 289 PGTPHTLGVVEPGKSPPPTMEEE--PWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNK 346
Query: 85 SDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRTVSQMLSERWYTLGPNEMQKY-NL 143
DKDHIRWPMSG H+LQQAAPG G AHQGHPNQDN TVSQ+LS+RWYTLGPNE QKY +L
Sbjct: 347 WDKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDL 406
Query: 144 AFQVKVAHLQQGPKEVQLRGQAHKPGASRSSSDTKEQLLWGRTAAHSQGTWLSLAQAFSH 203
AFQVKVAHLQQGPKEVQLRGQAHKPGASR+ QG ++ S
Sbjct: 407 AFQVKVAHLQQGPKEVQLRGQAHKPGASRT----------------VQGLHMASEDTASD 450
Query: 204 SG---VHSLDG--REIDRQALRELTQVVSGTASYSGPKPSTQHGAPGHFAAP-------- 250
+H +G + AL LT + S + P P H F P
Sbjct: 451 EEPMVIHEEEGVTMSLLMMALAPLTLISSSRSHSRPPGPLCTHPPLQGFFCPCPDSQPCG 510
Query: 251 -----GEGGDPWAALLPPTVPRSTCSFWQSMVTPCPPPTRTRMLPPQPWHP 296
G D AAL P +P PC P QPW P
Sbjct: 511 GPDPTSPGSDSDAALDAPPLPLPESH-------PCLTPPHPAQALVQPWLP 554
>gi|239508816 PREDICTED: hypothetical protein LOC442676 [Homo
sapiens]
Length = 679
Score = 214 bits (545), Expect = 9e-56
Identities = 139/291 (47%), Positives = 153/291 (52%), Gaps = 44/291 (15%)
Query: 25 PPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQAQSLSALRKEQDSSSEKDGRSPNK 84
P HT P PPT E W P AQSLSALRKEQDSSS+KDG SPNK
Sbjct: 289 PGTPHTLGVVEPGKSPPPTMEEE--PWAPKGSPCWTAQSLSALRKEQDSSSKKDGHSPNK 346
Query: 85 SDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRTVSQMLSERWYTLGPNEMQKY-NL 143
DKDHIRWPMSG H+LQQAAPG G AHQGHPNQDN TVSQ+LS+RWYTLGPNE QKY +L
Sbjct: 347 WDKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDL 406
Query: 144 AFQVKVAHLQQGPKEVQLRGQAHKPGASRSSSDTKEQLLWGRTAAHSQGTWLSLAQAFSH 203
AFQVKVAHLQQGPKEVQLRGQAHKPGASR+ QG ++ S
Sbjct: 407 AFQVKVAHLQQGPKEVQLRGQAHKPGASRT----------------VQGLHMASEDTASD 450
Query: 204 SG---VHSLDG--REIDRQALRELTQVVSGTASYSGPKPSTQHGAPGHFAAP-------- 250
+H +G + AL LT + S + P P H F P
Sbjct: 451 EEPMVIHEEEGVTMSLLMMALAPLTLISSSRSHSRPPGPLCTHPPLQGFFCPCPDSQPCG 510
Query: 251 -----GEGGDPWAALLPPTVPRSTCSFWQSMVTPCPPPTRTRMLPPQPWHP 296
G D AAL P +P PC P QPW P
Sbjct: 511 GPDPTSPGSDSDAALDAPPLPLPESH-------PCLTPPHPAQALVQPWLP 554
>gi|169171742 PREDICTED: hypothetical protein LOC442676 [Homo
sapiens]
Length = 679
Score = 212 bits (539), Expect = 5e-55
Identities = 138/291 (47%), Positives = 152/291 (52%), Gaps = 44/291 (15%)
Query: 25 PPCSHTRPSNLPVTQWPPTRENNLPSWQPLLMSVHQAQSLSALRKEQDSSSEKDGRSPNK 84
P HT P PPT E W P AQSLSALRKEQDSSS+KDG SPNK
Sbjct: 289 PGTPHTLGVVEPGKSPPPTMEEE--PWAPQGSPCWTAQSLSALRKEQDSSSKKDGHSPNK 346
Query: 85 SDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRTVSQMLSERWYTLGPNEMQKY-NL 143
DKDHIRWPMSG H+LQQAAPG G AHQGHPNQDN TVSQ+LS+RWYTLGPNE QKY +
Sbjct: 347 WDKDHIRWPMSGGHELQQAAPGSGRAHQGHPNQDNWTVSQILSKRWYTLGPNETQKYHDQ 406
Query: 144 AFQVKVAHLQQGPKEVQLRGQAHKPGASRSSSDTKEQLLWGRTAAHSQGTWLSLAQAFSH 203
AFQVKVAHLQQGPKEVQLRGQAHKPGASR+ QG ++ S
Sbjct: 407 AFQVKVAHLQQGPKEVQLRGQAHKPGASRT----------------VQGLHMASEDTASD 450
Query: 204 SG---VHSLDG--REIDRQALRELTQVVSGTASYSGPKPSTQHGAPGHFAAP-------- 250
+H +G + AL LT + S + P P H F P
Sbjct: 451 EEPMVIHEEEGVTMSLLMMALAPLTLISSSRSHSRPPGPLCTHPPLQGFFCPCPDSQPCG 510
Query: 251 -----GEGGDPWAALLPPTVPRSTCSFWQSMVTPCPPPTRTRMLPPQPWHP 296
G D AAL P +P PC P QPW P
Sbjct: 511 GPDPTSPGSDSDAALDAPPLPLPESH-------PCLTPPHPAQALVQPWLP 554
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 197 bits (500), Expect = 2e-50
Identities = 129/260 (49%), Positives = 147/260 (56%), Gaps = 48/260 (18%)
Query: 53 PLLMSVHQAQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQ 112
PL + QSLSAL KE+DSSSEKDGRSPNK +KDHIR PM+ + HQ
Sbjct: 163 PLPPGKRRTQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRAL--VHQ 220
Query: 113 GHPNQDNRTVSQMLSERWYTLGPNEMQKYN-LAFQVKVAHLQQGP--------------- 156
HPNQDNRTVS++L E WY LGP E QKY+ LAFQVK AH + P
Sbjct: 221 RHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSE 280
Query: 157 ------------KEVQLR-----GQAHKPGASRS----------SSDTKE--QLLWGRTA 187
KE + R G A PG S SSDTK G
Sbjct: 281 AKPTSLGLAGGHKETRERSMSETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSSSCGAER 340
Query: 188 AHSQG-TWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTASYSGPKPSTQHGAPGH 246
H+ G + +AFSHSGVHSLDG E+D QAL+ELTQ+VSG ASYSGPKPSTQ+GAPG
Sbjct: 341 LHTVGGPGSARPRAFSHSGVHSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGP 400
Query: 247 FAAPGEGGDPWAALLPPTVP 266
FAAPGEGG A PP +P
Sbjct: 401 FAAPGEGGALAATGRPPLLP 420
Score = 38.9 bits (89), Expect = 0.007
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 9/46 (19%)
Query: 1 MFVWRNVEGHSAAVFSWYS-IPFLTP--------PCSHTRPSNLPV 37
MFVW NVE S AVF W+S +PFL P P +P++ PV
Sbjct: 21 MFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQPASHPV 66
Score = 28.5 bits (62), Expect = 9.4
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Query: 279 PCPPPTRTRMLPPQPWHPPPS-YWAQEPSKPRSLVNAAERAPYGPNPWGWGP 329
P PPPT T P P PS +P+ P S A+ AP P P GP
Sbjct: 1536 PVPPPTGTAAAPA----PTPSPAGGPDPTSPSSDSGTAQAAPPLPPPPESGP 1583
>gi|217035121 HMG-BOX transcription factor BBX isoform 1 [Homo
sapiens]
Length = 941
Score = 40.8 bits (94), Expect = 0.002
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 58 VHQAQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQ 117
+ + Q L A EQD +D SP + R PM+ L Q HP
Sbjct: 52 IDKVQLLGADGLEQDVGETEDDESPEQ----RARRPMNAF--LLFCKRHRSLVRQEHPRL 105
Query: 118 DNRTVSQMLSERWYTLGPNEMQKY-NLAFQVKVAHLQQGP 156
DNR +++L++ W L P E QKY ++A + K A ++ P
Sbjct: 106 DNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANP 145
>gi|18378731 HMG-BOX transcription factor BBX isoform 2 [Homo
sapiens]
Length = 911
Score = 40.8 bits (94), Expect = 0.002
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 58 VHQAQSLSALRKEQDSSSEKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQ 117
+ + Q L A EQD +D SP + R PM+ L Q HP
Sbjct: 52 IDKVQLLGADGLEQDVGETEDDESPEQ----RARRPMNAF--LLFCKRHRSLVRQEHPRL 105
Query: 118 DNRTVSQMLSERWYTLGPNEMQKY-NLAFQVKVAHLQQGP 156
DNR +++L++ W L P E QKY ++A + K A ++ P
Sbjct: 106 DNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANP 145
>gi|65508004 Wilms tumor 1 isoform D [Homo sapiens]
Length = 517
Score = 40.4 bits (93), Expect = 0.002
Identities = 36/116 (31%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 192 GTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTASYSGPKPSTQH-GAPGHFAAP 250
G W L A + L GR + E Q+ S + P+ G G A P
Sbjct: 38 GIWAKLGAA--EASAERLQGRRSRGASGSEPQQMGSDVRDLNALLPAVPSLGGGGGCALP 95
Query: 251 GEGGDPWAALLPPTVPRSTCSFWQSMVTPCPPPTRTRMLPPQPWHPPPSYWAQEPS 306
G WA +L P + S + S+ P PPP PP P PP S+ QEPS
Sbjct: 96 VSGAAQWAPVLDFAPPGA--SAYGSLGGPAPPPAP----PPPPPPPPHSFIKQEPS 145
>gi|65507908 Wilms tumor 1 isoform C [Homo sapiens]
Length = 500
Score = 40.4 bits (93), Expect = 0.002
Identities = 36/116 (31%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 192 GTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTASYSGPKPSTQH-GAPGHFAAP 250
G W L A + L GR + E Q+ S + P+ G G A P
Sbjct: 38 GIWAKLGAA--EASAERLQGRRSRGASGSEPQQMGSDVRDLNALLPAVPSLGGGGGCALP 95
Query: 251 GEGGDPWAALLPPTVPRSTCSFWQSMVTPCPPPTRTRMLPPQPWHPPPSYWAQEPS 306
G WA +L P + S + S+ P PPP PP P PP S+ QEPS
Sbjct: 96 VSGAAQWAPVLDFAPPGA--SAYGSLGGPAPPPAP----PPPPPPPPHSFIKQEPS 145
>gi|65507817 Wilms tumor 1 isoform B [Homo sapiens]
Length = 514
Score = 40.4 bits (93), Expect = 0.002
Identities = 36/116 (31%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 192 GTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTASYSGPKPSTQH-GAPGHFAAP 250
G W L A + L GR + E Q+ S + P+ G G A P
Sbjct: 38 GIWAKLGAA--EASAERLQGRRSRGASGSEPQQMGSDVRDLNALLPAVPSLGGGGGCALP 95
Query: 251 GEGGDPWAALLPPTVPRSTCSFWQSMVTPCPPPTRTRMLPPQPWHPPPSYWAQEPS 306
G WA +L P + S + S+ P PPP PP P PP S+ QEPS
Sbjct: 96 VSGAAQWAPVLDFAPPGA--SAYGSLGGPAPPPAP----PPPPPPPPHSFIKQEPS 145
>gi|65507714 Wilms tumor 1 isoform A [Homo sapiens]
Length = 497
Score = 40.4 bits (93), Expect = 0.002
Identities = 36/116 (31%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 192 GTWLSLAQAFSHSGVHSLDGREIDRQALRELTQVVSGTASYSGPKPSTQH-GAPGHFAAP 250
G W L A + L GR + E Q+ S + P+ G G A P
Sbjct: 38 GIWAKLGAA--EASAERLQGRRSRGASGSEPQQMGSDVRDLNALLPAVPSLGGGGGCALP 95
Query: 251 GEGGDPWAALLPPTVPRSTCSFWQSMVTPCPPPTRTRMLPPQPWHPPPSYWAQEPS 306
G WA +L P + S + S+ P PPP PP P PP S+ QEPS
Sbjct: 96 VSGAAQWAPVLDFAPPGA--SAYGSLGGPAPPPAP----PPPPPPPPHSFIKQEPS 145
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 40.0 bits (92), Expect = 0.003
Identities = 54/189 (28%), Positives = 72/189 (38%), Gaps = 28/189 (14%)
Query: 156 PKEVQLRGQAHKPGASRSSSDTKEQLLW--GRTAAHSQGTWLSLAQAFSHSGVHSLDGRE 213
P+ + ++ +H+P S S LLW G+ SQ S++ F S HS+
Sbjct: 791 PRRISVQLDSHQPTQSISQPPPPPSLLWSAGQGQPGSQPPH-SISTEFQTSHEHSVSS-- 847
Query: 214 IDRQALRELTQVVSGTASYSGPKPSTQHGAPGHFAAPGEGGDPWAALLPPTVPRSTCSFW 273
A + + S P P T+ + + PG G P PP +P T
Sbjct: 848 ----AFKNSCNIPSPP-----PLPCTESSS----SMPGLGMVPPP---PPPLPGMTVPTL 891
Query: 274 QSMVTPCPPPTR-TRMLPPQPWHPPPSYWAQEPSKPRSLVNAAERAPYGPNPW-GWGPRD 331
S P PPP + T MLPP PPP A P P + A P P P G P
Sbjct: 892 PSTAIPQPPPLQGTEMLPPP---PPPLPGAGIPPPPP--LPGAGILPLPPLPGAGIPPPP 946
Query: 332 AFQGGLFPP 340
G PP
Sbjct: 947 PLPGAAIPP 955
>gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo
sapiens]
Length = 520
Score = 39.7 bits (91), Expect = 0.004
Identities = 39/124 (31%), Positives = 52/124 (41%), Gaps = 26/124 (20%)
Query: 238 STQHGAPGHFAAPGEGGDPWAALLPPTVPRSTCSFWQSMV-TPCP---------PPTRTR 287
S H +P AA G+ P + P VP S S TP P PP+
Sbjct: 279 SRGHASP--LAANGQSPSPGSQ--SPVVPAGAVSTGSSSPGTPQPAPQLPLNAAPPSSVP 334
Query: 288 MLPPQPWHPPPSYWAQEPSKPRSLVNAAERAPYGPNPWGWGPRDAF-QGGLFPPNG---S 343
+PP PPP+ P+ RS+++ P PWGW R A + G +PP G +
Sbjct: 335 PVPPSEALPPPAC-PSAPAPRRSIISR-------PPPWGWRLRGALGRRGQWPPWGGGRA 386
Query: 344 CHLL 347
CH L
Sbjct: 387 CHCL 390
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 39.3 bits (90), Expect = 0.005
Identities = 43/131 (32%), Positives = 45/131 (34%), Gaps = 30/131 (22%)
Query: 225 VVSGTASYSGPKPSTQHG------APGHFAAPGEGGDPWAALLPPTVPRSTCSFWQSMVT 278
+V G SGP P G P PG GG P PP P + S
Sbjct: 331 IVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRGGPP-----PPPPPATGRS------G 379
Query: 279 PCPPPTRTRMLPPQPWHPPPSYWAQEPSKPRSLVNAAERAPYGPNPWGWGPRDAFQGGLF 338
P PPP PP P PPP P P S N GP P P GGL
Sbjct: 380 PLPPPPPGAGGPPMPPPPPP------PPPPPSSGN-------GPAPPPLPPALVPAGGLA 426
Query: 339 PPNGSCHLLVQ 349
P G LL Q
Sbjct: 427 PGGGRGALLDQ 437
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 38.1 bits (87), Expect = 0.012
Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 20/115 (17%)
Query: 232 YSGPKPSTQHGAPGHFAAPGEGGDPWAALLPPTVPRSTCSFWQSMVTPCPP--------- 282
++ P P + + G + P DP + PP+ P T +++ C P
Sbjct: 146 HASPDPPPELCSQGDLSVPSPPPDPDSFFTPPSTPTKTT---YALLPACGPHGDARDSEA 202
Query: 283 PTRTRMLPPQPWHPPPSY-------WAQEPSKPRSLVNAAERAPYGPNPWGWGPR 330
R +L P P SY WA PS SL+ AE + P+ WG P+
Sbjct: 203 ELRDELLDSPPASPSGSYITADGDSWASSPSCSLSLLAPAEGLDF-PSGWGLSPQ 256
>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 38.1 bits (87), Expect = 0.012
Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 20/115 (17%)
Query: 232 YSGPKPSTQHGAPGHFAAPGEGGDPWAALLPPTVPRSTCSFWQSMVTPCPP--------- 282
++ P P + + G + P DP + PP+ P T +++ C P
Sbjct: 146 HASPDPPPELCSQGDLSVPSPPPDPDSFFTPPSTPTKTT---YALLPACGPHGDARDSEA 202
Query: 283 PTRTRMLPPQPWHPPPSY-------WAQEPSKPRSLVNAAERAPYGPNPWGWGPR 330
R +L P P SY WA PS SL+ AE + P+ WG P+
Sbjct: 203 ELRDELLDSPPASPSGSYITADGDSWASSPSCSLSLLAPAEGLDF-PSGWGLSPQ 256
>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 38.1 bits (87), Expect = 0.012
Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 20/115 (17%)
Query: 232 YSGPKPSTQHGAPGHFAAPGEGGDPWAALLPPTVPRSTCSFWQSMVTPCPP--------- 282
++ P P + + G + P DP + PP+ P T +++ C P
Sbjct: 146 HASPDPPPELCSQGDLSVPSPPPDPDSFFTPPSTPTKTT---YALLPACGPHGDARDSEA 202
Query: 283 PTRTRMLPPQPWHPPPSY-------WAQEPSKPRSLVNAAERAPYGPNPWGWGPR 330
R +L P P SY WA PS SL+ AE + P+ WG P+
Sbjct: 203 ELRDELLDSPPASPSGSYITADGDSWASSPSCSLSLLAPAEGLDF-PSGWGLSPQ 256
>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 38.1 bits (87), Expect = 0.012
Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 20/115 (17%)
Query: 232 YSGPKPSTQHGAPGHFAAPGEGGDPWAALLPPTVPRSTCSFWQSMVTPCPP--------- 282
++ P P + + G + P DP + PP+ P T +++ C P
Sbjct: 146 HASPDPPPELCSQGDLSVPSPPPDPDSFFTPPSTPTKTT---YALLPACGPHGDARDSEA 202
Query: 283 PTRTRMLPPQPWHPPPSY-------WAQEPSKPRSLVNAAERAPYGPNPWGWGPR 330
R +L P P SY WA PS SL+ AE + P+ WG P+
Sbjct: 203 ELRDELLDSPPASPSGSYITADGDSWASSPSCSLSLLAPAEGLDF-PSGWGLSPQ 256
>gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 38.1 bits (87), Expect = 0.012
Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 20/115 (17%)
Query: 232 YSGPKPSTQHGAPGHFAAPGEGGDPWAALLPPTVPRSTCSFWQSMVTPCPP--------- 282
++ P P + + G + P DP + PP+ P T +++ C P
Sbjct: 146 HASPDPPPELCSQGDLSVPSPPPDPDSFFTPPSTPTKTT---YALLPACGPHGDARDSEA 202
Query: 283 PTRTRMLPPQPWHPPPSY-------WAQEPSKPRSLVNAAERAPYGPNPWGWGPR 330
R +L P P SY WA PS SL+ AE + P+ WG P+
Sbjct: 203 ELRDELLDSPPASPSGSYITADGDSWASSPSCSLSLLAPAEGLDF-PSGWGLSPQ 256
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 37.4 bits (85), Expect = 0.020
Identities = 31/90 (34%), Positives = 36/90 (40%), Gaps = 12/90 (13%)
Query: 235 PKPSTQHGAPGHFAAPGEGGDPWAALLPPTVPRSTCSFWQSMVTPCPPPTRTRMLPPQPW 294
P P+ GAP P P AA PP R S+ P PPP RM PP P
Sbjct: 301 PPPARGRGAP----PPPPSRAPTAAPPPPPPSRP------SVAVPPPPPN--RMYPPPPP 348
Query: 295 HPPPSYWAQEPSKPRSLVNAAERAPYGPNP 324
P S + P P S++ AP P P
Sbjct: 349 ALPSSAPSGPPPPPPSVLGVGPVAPPPPPP 378
Score = 31.2 bits (69), Expect = 1.5
Identities = 32/115 (27%), Positives = 41/115 (35%), Gaps = 20/115 (17%)
Query: 215 DRQALRELTQVVSGTASYSGPKPSTQHGAPGHFAAPGEGGDPWAALLPPTVPRSTCSFWQ 274
DR+ + + + T K + AP P GG P PP P ++
Sbjct: 248 DRETSKVIYDFIEKTGGVEAVKNELRRQAPPP-PPPSRGGPP----PPPPPPHNS----- 297
Query: 275 SMVTPCPPPTRTRMLPPQPWHPPPSYWAQEPSKPRSLVNAAERAP-----YGPNP 324
P PPP R R PP P P + A P P S + A P Y P P
Sbjct: 298 ---GPPPPPARGRGAPPPP--PSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPP 347
>gi|23957680 ral guanine nucleotide dissociation stimulator-like 4
[Homo sapiens]
Length = 473
Score = 36.6 bits (83), Expect = 0.035
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 234 GPKPSTQHGAPGHFAAPGEGGDPWAALLPPTVPRSTC 270
GP P H APG APGEG P L P + P S+C
Sbjct: 163 GP-PGYLHSAPGPAPAPGEGPPPGTVLEPQSAPESSC 198
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,820,523
Number of Sequences: 37866
Number of extensions: 1115876
Number of successful extensions: 5716
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 268
Number of HSP's that attempted gapping in prelim test: 4940
Number of HSP's gapped (non-prelim): 961
length of query: 351
length of database: 18,247,518
effective HSP length: 103
effective length of query: 248
effective length of database: 14,347,320
effective search space: 3558135360
effective search space used: 3558135360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.