Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239742626
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742626 PREDICTED: hypothetical protein XP_002342598 [Homo
sapiens]
(207 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239748608 PREDICTED: hypothetical protein XP_002346730 [Homo ... 428 e-120
gi|239742626 PREDICTED: hypothetical protein XP_002342598 [Homo ... 428 e-120
gi|239754145 PREDICTED: hypothetical protein [Homo sapiens] 422 e-119
gi|239756433 PREDICTED: hypothetical protein [Homo sapiens] 35 0.034
gi|239750970 PREDICTED: hypothetical protein XP_002347634 [Homo ... 35 0.034
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 35 0.034
gi|239745376 PREDICTED: hypothetical protein XP_002343484 [Homo ... 35 0.034
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 35 0.034
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 35 0.034
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 35 0.045
gi|239749372 PREDICTED: hypothetical protein XP_002347017 [Homo ... 33 0.13
gi|239743509 PREDICTED: hypothetical protein XP_002342878 [Homo ... 33 0.13
gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens] 33 0.17
gi|126352446 elastin isoform d precursor [Homo sapiens] 32 0.29
gi|126352322 elastin isoform c precursor [Homo sapiens] 32 0.29
gi|126352700 elastin isoform b precursor [Homo sapiens] 32 0.29
gi|4758392 forkhead box D1 [Homo sapiens] 32 0.29
gi|126352608 elastin isoform e precursor [Homo sapiens] 32 0.50
gi|126352440 elastin isoform a precursor [Homo sapiens] 32 0.50
gi|239753580 PREDICTED: hypothetical protein [Homo sapiens] 31 0.65
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 31 0.65
gi|239748080 PREDICTED: hypothetical protein [Homo sapiens] 31 0.65
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 31 0.65
gi|239741977 PREDICTED: hypothetical protein XP_002342365 [Homo ... 31 0.65
gi|239741486 PREDICTED: hypothetical protein XP_002342213 [Homo ... 31 0.65
gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens] 31 0.65
gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] 31 0.65
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 31 0.65
gi|166795264 AE binding protein 2 isoform b [Homo sapiens] 31 0.65
gi|166795262 AE binding protein 2 isoform a [Homo sapiens] 31 0.65
>gi|239748608 PREDICTED: hypothetical protein XP_002346730 [Homo
sapiens]
Length = 207
Score = 428 bits (1100), Expect = e-120
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 1 MPSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPWTGEVGAGSRWGR 60
MPSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPWTGEVGAGSRWGR
Sbjct: 1 MPSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPWTGEVGAGSRWGR 60
Query: 61 GLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE 120
GLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE
Sbjct: 61 GLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE 120
Query: 121 RTFQKQTINKHRRHTSVKSVPRCELNRGDVMASEWVVNSDGLVRRGLAEQVPLKPKSEGR 180
RTFQKQTINKHRRHTSVKSVPRCELNRGDVMASEWVVNSDGLVRRGLAEQVPLKPKSEGR
Sbjct: 121 RTFQKQTINKHRRHTSVKSVPRCELNRGDVMASEWVVNSDGLVRRGLAEQVPLKPKSEGR 180
Query: 181 AGTCGRRSLSEPRIAGFPGECQIGQPR 207
AGTCGRRSLSEPRIAGFPGECQIGQPR
Sbjct: 181 AGTCGRRSLSEPRIAGFPGECQIGQPR 207
>gi|239742626 PREDICTED: hypothetical protein XP_002342598 [Homo
sapiens]
Length = 207
Score = 428 bits (1100), Expect = e-120
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 1 MPSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPWTGEVGAGSRWGR 60
MPSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPWTGEVGAGSRWGR
Sbjct: 1 MPSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPWTGEVGAGSRWGR 60
Query: 61 GLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE 120
GLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE
Sbjct: 61 GLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE 120
Query: 121 RTFQKQTINKHRRHTSVKSVPRCELNRGDVMASEWVVNSDGLVRRGLAEQVPLKPKSEGR 180
RTFQKQTINKHRRHTSVKSVPRCELNRGDVMASEWVVNSDGLVRRGLAEQVPLKPKSEGR
Sbjct: 121 RTFQKQTINKHRRHTSVKSVPRCELNRGDVMASEWVVNSDGLVRRGLAEQVPLKPKSEGR 180
Query: 181 AGTCGRRSLSEPRIAGFPGECQIGQPR 207
AGTCGRRSLSEPRIAGFPGECQIGQPR
Sbjct: 181 AGTCGRRSLSEPRIAGFPGECQIGQPR 207
>gi|239754145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 207
Score = 422 bits (1086), Expect = e-119
Identities = 206/207 (99%), Positives = 206/207 (99%)
Query: 1 MPSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPWTGEVGAGSRWGR 60
MPSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAP TGEVGAGSRWGR
Sbjct: 1 MPSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPRTGEVGAGSRWGR 60
Query: 61 GLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE 120
GLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE
Sbjct: 61 GLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE 120
Query: 121 RTFQKQTINKHRRHTSVKSVPRCELNRGDVMASEWVVNSDGLVRRGLAEQVPLKPKSEGR 180
RTFQKQTINKHRRHTSVKSVPRCELNRGDVMASEWVVNSDGLVRRGLAEQVPLKPKSEGR
Sbjct: 121 RTFQKQTINKHRRHTSVKSVPRCELNRGDVMASEWVVNSDGLVRRGLAEQVPLKPKSEGR 180
Query: 181 AGTCGRRSLSEPRIAGFPGECQIGQPR 207
AGTCGRRSLSEPRIAGFPGECQIGQPR
Sbjct: 181 AGTCGRRSLSEPRIAGFPGECQIGQPR 207
>gi|239756433 PREDICTED: hypothetical protein [Homo sapiens]
Length = 513
Score = 35.4 bits (80), Expect = 0.034
Identities = 38/119 (31%), Positives = 45/119 (37%), Gaps = 19/119 (15%)
Query: 2 PSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPW-------TGEVGA 54
P+AA++ AAR GA P + A RAR + PP P GE
Sbjct: 283 PAAAARRPLLAAARRGALPAPGALIGPAPRARRPLACTFANPPPPPAGCGSSAPIGEARR 342
Query: 55 GSR---WGRGLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHC 110
G R W LG G D A L PA +SL KC A +R P P C
Sbjct: 343 GERGDHWLPALGRPG--------DWLAGLQPAFGVKRSLRKCARGESSAGAR-PLFPGC 392
>gi|239750970 PREDICTED: hypothetical protein XP_002347634 [Homo
sapiens]
Length = 513
Score = 35.4 bits (80), Expect = 0.034
Identities = 38/119 (31%), Positives = 45/119 (37%), Gaps = 19/119 (15%)
Query: 2 PSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPW-------TGEVGA 54
P+AA++ AAR GA P + A RAR + PP P GE
Sbjct: 283 PAAAARRPLLAAARRGALPAPGALIGPAPRARRPLACTFANPPPPPAGCGSSAPIGEARR 342
Query: 55 GSR---WGRGLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHC 110
G R W LG G D A L PA +SL KC A +R P P C
Sbjct: 343 GERGDHWLPALGRPG--------DWLAGLQPAFGVKRSLRKCARGESSAGAR-PLFPGC 392
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 35.4 bits (80), Expect = 0.034
Identities = 37/116 (31%), Positives = 47/116 (40%), Gaps = 17/116 (14%)
Query: 8 GCQGGAARGGAAPPFRVFVAAAERAREAR---GKSTVKPPAAPWTGEVGAGS-------R 57
G GGA GGAA + A +R R+ R G+ V A G GAG+ R
Sbjct: 823 GVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGGGRRVR 882
Query: 58 WGRGLGGA----GKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPH 109
G G G A + + PAAA + A GV++ G RP P H H
Sbjct: 883 HGHGHGAAVLQRAPCRQQRHLAPAAA-AAAAQGVRAAQ--GRAHRPGAQGAPSHRH 935
>gi|239745376 PREDICTED: hypothetical protein XP_002343484 [Homo
sapiens]
Length = 513
Score = 35.4 bits (80), Expect = 0.034
Identities = 38/119 (31%), Positives = 45/119 (37%), Gaps = 19/119 (15%)
Query: 2 PSAASKGCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPW-------TGEVGA 54
P+AA++ AAR GA P + A RAR + PP P GE
Sbjct: 283 PAAAARRPLLAAARRGALPAPGALIGPAPRARRPLACTFANPPPPPAGCGSSAPIGEARR 342
Query: 55 GSR---WGRGLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHC 110
G R W LG G D A L PA +SL KC A +R P P C
Sbjct: 343 GERGDHWLPALGRPG--------DWLAGLQPAFGVKRSLRKCARGESSAGAR-PLFPGC 392
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 35.4 bits (80), Expect = 0.034
Identities = 37/116 (31%), Positives = 47/116 (40%), Gaps = 17/116 (14%)
Query: 8 GCQGGAARGGAAPPFRVFVAAAERAREAR---GKSTVKPPAAPWTGEVGAGS-------R 57
G GGA GGAA + A +R R+ R G+ V A G GAG+ R
Sbjct: 823 GVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGGGRRVR 882
Query: 58 WGRGLGGA----GKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPH 109
G G G A + + PAAA + A GV++ G RP P H H
Sbjct: 883 HGHGHGAAVLQRAPCRQQRHLAPAAA-AAAAQGVRAAQ--GRAHRPGAQGAPSHRH 935
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 35.4 bits (80), Expect = 0.034
Identities = 39/146 (26%), Positives = 57/146 (39%), Gaps = 13/146 (8%)
Query: 14 ARGGAAPPFRVFVAAAERAREARGKS----TVKPPAAPWTGEVGAGSRWGRGLG--GAGK 67
+R G++P + AA RA+ S P A P G+ S+ GRG G+
Sbjct: 1596 SRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSK-GRGPSPEGSSS 1654
Query: 68 AQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARK------SWSQSQER 121
+ PE P + + G+ K + P R + P RK S S S
Sbjct: 1655 TESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSP 1714
Query: 122 TFQKQTINKHRRHTSVKSVPRCELNR 147
+ +T +HRR SV S E +R
Sbjct: 1715 ETRSRTPPRHRRSPSVSSPEPAEKSR 1740
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 35.0 bits (79), Expect = 0.045
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 27 AAAERAREARGKSTVKPPAAPWTGEVGAGSRWGRGLGGAGKAQPLPEVDPAAALSPAGNG 86
AAA A A G +T KPPA P G G GR ++ A+ S + +
Sbjct: 340 AAAAAAAAASGVTTGKPPAPPQPG----GPAPGRNASARRRSSSSSSSSSASRTSSSRSS 395
Query: 87 VQSLNKCGALLRPARSRTPRHPHCARKSWSQSQERTFQ-KQTINKHRRHT 135
+S ++ + R+ RH +SWS+S+ R+ + ++ ++ RRH+
Sbjct: 396 SRSSSR--SRRGGGYYRSGRHARSRSRSWSRSRSRSRRYSRSRSRGRRHS 443
>gi|239749372 PREDICTED: hypothetical protein XP_002347017 [Homo
sapiens]
Length = 212
Score = 33.5 bits (75), Expect = 0.13
Identities = 37/125 (29%), Positives = 47/125 (37%), Gaps = 13/125 (10%)
Query: 2 PSAASKGCQGGAARGGAAPPFRVFVAAAER--AREARGKSTVKPPAAPWTGEVGAGSRWG 59
P+ S + GGA AAA R A + R + A P T SR G
Sbjct: 87 PARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAANATPRTPAEAKKSRLG 146
Query: 60 RGLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQ 119
RG +A P P DP +P Q++ G L R R RK W + +
Sbjct: 147 RG-----QATPPPPRDPRPGTAP----FQAVG--GTLGGGGTGRRGRGFSVPRKGWRRER 195
Query: 120 ERTFQ 124
ER FQ
Sbjct: 196 ERAFQ 200
>gi|239743509 PREDICTED: hypothetical protein XP_002342878 [Homo
sapiens]
Length = 212
Score = 33.5 bits (75), Expect = 0.13
Identities = 37/125 (29%), Positives = 47/125 (37%), Gaps = 13/125 (10%)
Query: 2 PSAASKGCQGGAARGGAAPPFRVFVAAAER--AREARGKSTVKPPAAPWTGEVGAGSRWG 59
P+ S + GGA AAA R A + R + A P T SR G
Sbjct: 87 PARPSLRLGSSSLTGGACCATAQLTAAARRTKATQLRPGIALAANATPRTPAEAKKSRLG 146
Query: 60 RGLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQ 119
RG +A P P DP +P Q++ G L R R RK W + +
Sbjct: 147 RG-----QATPPPPRDPRPGTAP----FQAVG--GTLGGGGTGRRGRGFSVPRKGWRRER 195
Query: 120 ERTFQ 124
ER FQ
Sbjct: 196 ERAFQ 200
>gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens]
Length = 645
Score = 33.1 bits (74), Expect = 0.17
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 38 KSTVKPPAAPWTGEVGAGSRWGRGLGGAGKAQPLPEVDPAAALSPAGNGV---QSLNKC- 93
+S +PP+ P V + + WGR LG AG +V SP G+ + SL C
Sbjct: 35 RSPSRPPSGPAPSSVHSSNTWGRVLGRAGGGPIDKQVFMPVESSPTGSELCRAVSLGLCR 94
Query: 94 GALLRPARSRTPRHP 108
G L R RT P
Sbjct: 95 GTFLAVPRVRTRMTP 109
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 32.3 bits (72), Expect = 0.29
Identities = 36/106 (33%), Positives = 41/106 (38%), Gaps = 11/106 (10%)
Query: 4 AASKGCQGG-AARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPWTGEVGAGSRWGRGL 62
AA G GG A GG P V V A A A K+ K A G VGA G G+
Sbjct: 602 AAVPGVLGGLGALGGVGIPGGV-VGAGPAAAAAAAKAAAK---AAQFGLVGAAGLGGLGV 657
Query: 63 GGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHP 108
GG G +P V + PA K G RP +P P
Sbjct: 658 GGLG----VPGVGGLGGIPPA--AAAKAAKYGVAARPGFGLSPIFP 697
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 32.3 bits (72), Expect = 0.29
Identities = 36/106 (33%), Positives = 41/106 (38%), Gaps = 11/106 (10%)
Query: 4 AASKGCQGG-AARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPWTGEVGAGSRWGRGL 62
AA G GG A GG P V V A A A K+ K A G VGA G G+
Sbjct: 583 AAVPGVLGGLGALGGVGIPGGV-VGAGPAAAAAAAKAAAK---AAQFGLVGAAGLGGLGV 638
Query: 63 GGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHP 108
GG G +P V + PA K G RP +P P
Sbjct: 639 GGLG----VPGVGGLGGIPPA--AAAKAAKYGVAARPGFGLSPIFP 678
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 32.3 bits (72), Expect = 0.29
Identities = 36/106 (33%), Positives = 41/106 (38%), Gaps = 11/106 (10%)
Query: 4 AASKGCQGG-AARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPWTGEVGAGSRWGRGL 62
AA G GG A GG P V V A A A K+ K A G VGA G G+
Sbjct: 568 AAVPGVLGGLGALGGVGIPGGV-VGAGPAAAAAAAKAAAK---AAQFGLVGAAGLGGLGV 623
Query: 63 GGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPRHP 108
GG G +P V + PA K G RP +P P
Sbjct: 624 GGLG----VPGVGGLGGIPPA--AAAKAAKYGVAARPGFGLSPIFP 663
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 32.3 bits (72), Expect = 0.29
Identities = 26/83 (31%), Positives = 30/83 (36%)
Query: 8 GCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPWTGEVGAGSRWGRGLGGAGK 67
GC G APP +F AAA A A PP P G +R G
Sbjct: 275 GCGYGLQLPPYAPPSALFAAAAAAAAAAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPL 334
Query: 68 AQPLPEVDPAAALSPAGNGVQSL 90
LP PA+A G G +L
Sbjct: 335 GAALPGPLPASAAKAGGPGASAL 357
Score = 28.5 bits (62), Expect = 4.2
Identities = 32/124 (25%), Positives = 47/124 (37%), Gaps = 14/124 (11%)
Query: 1 MPSAASKGCQGGAAR------------GGAAPPFRVFVAAAERAREARGKSTVKPPAA-P 47
+P++A+K GA+ GG+ P AAA+ A A+ + P AA P
Sbjct: 342 LPASAAKAGGPGASALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSPSPVAAPP 401
Query: 48 WTGEVGAGSRWGRGLG-GAGKAQPLPEVDPAAALSPAGNGVQSLNKCGALLRPARSRTPR 106
G G G +G A + L AAA S + + G L + T R
Sbjct: 402 APGSSGGGCAAQAAVGPAAALTRSLVAAAAAAASSVSSSAALGTLHQGTALSSVENFTAR 461
Query: 107 HPHC 110
+C
Sbjct: 462 ISNC 465
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 31.6 bits (70), Expect = 0.50
Identities = 34/90 (37%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 4 AASKGCQGG-AARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPWTGEVGAGSRWGRGL 62
AA G GG A GG P V V A A A K+ K A G VGA G G+
Sbjct: 578 AAVPGVLGGLGALGGVGIPGGV-VGAGPAAAAAAAKAAAK---AAQFGLVGAAGLGGLGV 633
Query: 63 GGAG--KAQPLPEVDPAAALSPAGNGVQSL 90
GG G L + PAAA A G L
Sbjct: 634 GGLGVPGVGGLGGIPPAAAAKAAKYGAAGL 663
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 31.6 bits (70), Expect = 0.50
Identities = 34/90 (37%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 4 AASKGCQGG-AARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPWTGEVGAGSRWGRGL 62
AA G GG A GG P V V A A A K+ K A G VGA G G+
Sbjct: 597 AAVPGVLGGLGALGGVGIPGGV-VGAGPAAAAAAAKAAAK---AAQFGLVGAAGLGGLGV 652
Query: 63 GGAG--KAQPLPEVDPAAALSPAGNGVQSL 90
GG G L + PAAA A G L
Sbjct: 653 GGLGVPGVGGLGGIPPAAAAKAAKYGAAGL 682
>gi|239753580 PREDICTED: hypothetical protein [Homo sapiens]
Length = 103
Score = 31.2 bits (69), Expect = 0.65
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Query: 8 GCQGGAAR--GGAAPPFRVFVAAAERA---REARGKSTVKPPAAPWTGEVGAGSRWGRGL 62
G GG +R GG P A+A R RE G++ + PA TG G +R G
Sbjct: 11 GEAGGRSRSAGGTDP------ASARRGWGCRERSGRARRRAPAG--TGSRGVRARPGEPA 62
Query: 63 GGAGKAQPLPEVDPAAALSPAG 84
G G+ + LP+V P ++ G
Sbjct: 63 GAEGEVESLPKVLPVLVVACRG 84
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 31.2 bits (69), Expect = 0.65
Identities = 33/104 (31%), Positives = 39/104 (37%), Gaps = 19/104 (18%)
Query: 13 AARGGAAPPFRVF---VAAAERAREARGKSTVKP-----PAAPWTGEVGAGSRWGRGLG- 63
A RG PP R V+A AR R S + PA G G G RW +GLG
Sbjct: 84 AGRGAQRPPERFLPSSVSAGSAARTLRRGSEARKAQTPRPAGVAQGSGGGGERWLQGLGP 143
Query: 64 ----GAGKAQP------LPEVDPAAALSPAGNGVQSLNKCGALL 97
G A P LP +PAG + K A+L
Sbjct: 144 PRGRGLSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVL 187
Score = 28.1 bits (61), Expect = 5.5
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Query: 36 RGKSTVKPPAAPWTGEVGAGSRWGRGLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGA 95
+G+ K A W G G G + R + A P DPA + A G++
Sbjct: 176 KGEGGGKESAVLWKGAEGGGEKGNRNMAAA------PLGDPAREAAQAQTGLRRRRPLEL 229
Query: 96 LLRPARSRTP 105
+ RPA P
Sbjct: 230 VPRPALPSAP 239
>gi|239748080 PREDICTED: hypothetical protein [Homo sapiens]
Length = 103
Score = 31.2 bits (69), Expect = 0.65
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Query: 8 GCQGGAAR--GGAAPPFRVFVAAAERA---REARGKSTVKPPAAPWTGEVGAGSRWGRGL 62
G GG +R GG P A+A R RE G++ + PA TG G +R G
Sbjct: 11 GEAGGRSRSAGGTDP------ASARRGWGCRERSGRARRRAPAG--TGSRGVRARPGEPA 62
Query: 63 GGAGKAQPLPEVDPAAALSPAG 84
G G+ + LP+V P ++ G
Sbjct: 63 GAEGEVESLPKVLPVLVVACRG 84
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 31.2 bits (69), Expect = 0.65
Identities = 33/104 (31%), Positives = 39/104 (37%), Gaps = 19/104 (18%)
Query: 13 AARGGAAPPFRVF---VAAAERAREARGKSTVKP-----PAAPWTGEVGAGSRWGRGLG- 63
A RG PP R V+A AR R S + PA G G G RW +GLG
Sbjct: 84 AGRGAQRPPERFLPSSVSAGSAARTLRRGSEARKAQTPRPAGVAQGSGGGGERWLQGLGP 143
Query: 64 ----GAGKAQP------LPEVDPAAALSPAGNGVQSLNKCGALL 97
G A P LP +PAG + K A+L
Sbjct: 144 PRGRGLSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVL 187
Score = 28.1 bits (61), Expect = 5.5
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Query: 36 RGKSTVKPPAAPWTGEVGAGSRWGRGLGGAGKAQPLPEVDPAAALSPAGNGVQSLNKCGA 95
+G+ K A W G G G + R + A P DPA + A G++
Sbjct: 176 KGEGGGKESAVLWKGAEGGGEKGNRNMAAA------PLGDPAREAAQAQTGLRRRRPLEL 229
Query: 96 LLRPARSRTP 105
+ RPA P
Sbjct: 230 VPRPALPSAP 239
>gi|239741977 PREDICTED: hypothetical protein XP_002342365 [Homo
sapiens]
Length = 103
Score = 31.2 bits (69), Expect = 0.65
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Query: 8 GCQGGAAR--GGAAPPFRVFVAAAERA---REARGKSTVKPPAAPWTGEVGAGSRWGRGL 62
G GG +R GG P A+A R RE G++ + PA TG G +R G
Sbjct: 11 GEAGGRSRSAGGTDP------ASARRGWGCRERSGRARRRAPAG--TGSRGVRARPGEPA 62
Query: 63 GGAGKAQPLPEVDPAAALSPAG 84
G G+ + LP+V P ++ G
Sbjct: 63 GAEGEVESLPKVLPVLVVACRG 84
>gi|239741486 PREDICTED: hypothetical protein XP_002342213 [Homo
sapiens]
Length = 233
Score = 31.2 bits (69), Expect = 0.65
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 2 PSAASKGCQG-GAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPWT---GEVGAGSR 57
PS S+ +G G RG A ERA +RG+ST ++P T G+ A +R
Sbjct: 139 PSPGSRVGRGLGTGRGKLAHRVAPSKEPPERACGSRGRSTGWAASSPKTHAAGQAPAAAR 198
Query: 58 WGRGLGGAGKAQPLP 72
GRG G A + P
Sbjct: 199 SGRGAGPAREGSGAP 213
>gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens]
Length = 636
Score = 31.2 bits (69), Expect = 0.65
Identities = 27/102 (26%), Positives = 38/102 (37%), Gaps = 11/102 (10%)
Query: 19 APPFRVFVAAAERAREARGKSTVKPPAAPWTGEVGAGSRWGRGLGGAGKAQPLPEVDPAA 78
A PF V AAE S ++ PAAP GA + G G G G+A P+
Sbjct: 73 AKPFVPNVHAAEFV-----PSFLRGPAAPPPPAGGAANNHGAGSGAGGRAAPVESSQEEQ 127
Query: 79 ALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE 120
+L N S+ + +P +SW +E
Sbjct: 128 SLCEGSNSAVSMELSEPIENGETEMSP------EESWEHKEE 163
>gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens]
Length = 637
Score = 31.2 bits (69), Expect = 0.65
Identities = 28/102 (27%), Positives = 39/102 (38%), Gaps = 10/102 (9%)
Query: 19 APPFRVFVAAAERAREARGKSTVKPPAAPWTGEVGAGSRWGRGLGGAGKAQPLPEVDPAA 78
A PF V AAE S ++ PAAP GA + G G G G+A P+
Sbjct: 73 AKPFVPNVHAAEFV-----PSFLRGPAAPPPPAGGAANNHGAGSGAGGRAAPVESSQEEQ 127
Query: 79 ALSPAGNGVQSLNKCGALLRPARSRTPRHPHCARKSWSQSQE 120
+L N S+ ++ T P +SW +E
Sbjct: 128 SLCEGSNSAVSMELSEPIVE--NGETEMSP---EESWEHKEE 164
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 31.2 bits (69), Expect = 0.65
Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 14/74 (18%)
Query: 3 SAASKGCQGGAARGGAAPP---------FRVFVAAAERAREARGKSTVKPPAAPWTGEVG 53
S G GG +PP R AAA ARGK + P +AP
Sbjct: 317 SGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAP-----S 371
Query: 54 AGSRWGRGLGGAGK 67
+ R GR GGAG+
Sbjct: 372 SQGRGGRAAGGAGR 385
>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
Length = 517
Score = 31.2 bits (69), Expect = 0.65
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 8 GCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPWT--GEVGAGSRWGRGLGGA 65
G G AARG A PP E E ++ + AA G G G G G+GG
Sbjct: 23 GSPGSAARGRAEPP-----EEEEEEEEEEEEAEAEAVAALLLNGGSGGGGGGGGGGVGG- 76
Query: 66 GKAQPLPEVDPAAALSPAG 84
G+A+ + E P +A S AG
Sbjct: 77 GEAETMSEPSPESA-SQAG 94
>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
Length = 503
Score = 31.2 bits (69), Expect = 0.65
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 8 GCQGGAARGGAAPPFRVFVAAAERAREARGKSTVKPPAAPWT--GEVGAGSRWGRGLGGA 65
G G AARG A PP E E ++ + AA G G G G G+GG
Sbjct: 23 GSPGSAARGRAEPP-----EEEEEEEEEEEEAEAEAVAALLLNGGSGGGGGGGGGGVGG- 76
Query: 66 GKAQPLPEVDPAAALSPAG 84
G+A+ + E P +A S AG
Sbjct: 77 GEAETMSEPSPESA-SQAG 94
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,467,489
Number of Sequences: 37866
Number of extensions: 494823
Number of successful extensions: 2562
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 134
Number of HSP's that attempted gapping in prelim test: 2446
Number of HSP's gapped (non-prelim): 229
length of query: 207
length of database: 18,247,518
effective HSP length: 98
effective length of query: 109
effective length of database: 14,536,650
effective search space: 1584494850
effective search space used: 1584494850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.