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Search of human proteins with 239742492
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742492 PREDICTED: hypothetical protein XP_002342529 [Homo
sapiens]
(229 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239748521 PREDICTED: hypothetical protein XP_002346713 [Homo ... 466 e-132
gi|239742492 PREDICTED: hypothetical protein XP_002342529 [Homo ... 466 e-132
gi|239753986 PREDICTED: similar to hCG1989907 [Homo sapiens] 464 e-131
gi|239746366 PREDICTED: hypothetical protein XP_002343738 [Homo ... 40 0.002
gi|15011916 nucleolar protein family A, member 1 [Homo sapiens] 37 0.011
gi|9506713 nucleolar protein family A, member 1 [Homo sapiens] 37 0.011
gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ... 37 0.014
gi|110611170 ADAM metallopeptidase with thrombospondin type 1 mo... 36 0.024
gi|4506321 protein tyrosine phosphatase, receptor type, N precur... 36 0.024
gi|28875797 small protein rich in arginine and glycine [Homo sap... 36 0.031
gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo ... 35 0.041
gi|239743103 PREDICTED: hypothetical protein XP_002342755 [Homo ... 35 0.041
gi|239508758 PREDICTED: hypothetical protein [Homo sapiens] 35 0.041
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 35 0.053
gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens] 35 0.053
gi|239756845 PREDICTED: hypothetical protein [Homo sapiens] 34 0.091
gi|169211844 PREDICTED: hypothetical protein [Homo sapiens] 34 0.091
gi|169211031 PREDICTED: hypothetical protein [Homo sapiens] 34 0.091
gi|13994190 frizzled 8 [Homo sapiens] 34 0.091
gi|239754516 PREDICTED: hypothetical protein [Homo sapiens] 34 0.12
gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo ... 34 0.12
gi|157743247 F-box protein 45 [Homo sapiens] 34 0.12
gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo ... 33 0.16
gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens] 33 0.16
gi|169168202 PREDICTED: hypothetical protein [Homo sapiens] 33 0.20
gi|109255251 loricrin [Homo sapiens] 33 0.20
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 33 0.26
gi|169167967 PREDICTED: hypothetical protein [Homo sapiens] 33 0.26
gi|169167681 PREDICTED: hypothetical protein [Homo sapiens] 33 0.26
gi|6912372 forkhead box D3 [Homo sapiens] 33 0.26
>gi|239748521 PREDICTED: hypothetical protein XP_002346713 [Homo
sapiens]
Length = 229
Score = 466 bits (1198), Expect = e-132
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MFVMRTLSKQRRFFSALNSVVTDDRTPLSTKETDISLAFLKSAFWRDKPVAQGLSIPVCS 60
MFVMRTLSKQRRFFSALNSVVTDDRTPLSTKETDISLAFLKSAFWRDKPVAQGLSIPVCS
Sbjct: 1 MFVMRTLSKQRRFFSALNSVVTDDRTPLSTKETDISLAFLKSAFWRDKPVAQGLSIPVCS 60
Query: 61 PWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQPGYRGRRPA 120
PWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQPGYRGRRPA
Sbjct: 61 PWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQPGYRGRRPA 120
Query: 121 RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR 180
RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR
Sbjct: 121 RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR 180
Query: 181 HLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL 229
HLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL
Sbjct: 181 HLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL 229
>gi|239742492 PREDICTED: hypothetical protein XP_002342529 [Homo
sapiens]
Length = 229
Score = 466 bits (1198), Expect = e-132
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MFVMRTLSKQRRFFSALNSVVTDDRTPLSTKETDISLAFLKSAFWRDKPVAQGLSIPVCS 60
MFVMRTLSKQRRFFSALNSVVTDDRTPLSTKETDISLAFLKSAFWRDKPVAQGLSIPVCS
Sbjct: 1 MFVMRTLSKQRRFFSALNSVVTDDRTPLSTKETDISLAFLKSAFWRDKPVAQGLSIPVCS 60
Query: 61 PWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQPGYRGRRPA 120
PWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQPGYRGRRPA
Sbjct: 61 PWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQPGYRGRRPA 120
Query: 121 RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR 180
RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR
Sbjct: 121 RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR 180
Query: 181 HLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL 229
HLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL
Sbjct: 181 HLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL 229
>gi|239753986 PREDICTED: similar to hCG1989907 [Homo sapiens]
Length = 229
Score = 464 bits (1193), Expect = e-131
Identities = 228/229 (99%), Positives = 228/229 (99%)
Query: 1 MFVMRTLSKQRRFFSALNSVVTDDRTPLSTKETDISLAFLKSAFWRDKPVAQGLSIPVCS 60
MFVMRTLSKQRRFFSALNSVVTDDRTPLSTKETDISLAFLKSAFWRDKPVAQGLSIPVCS
Sbjct: 1 MFVMRTLSKQRRFFSALNSVVTDDRTPLSTKETDISLAFLKSAFWRDKPVAQGLSIPVCS 60
Query: 61 PWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQPGYRGRRPA 120
PWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQPGYRGRRPA
Sbjct: 61 PWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQPGYRGRRPA 120
Query: 121 RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR 180
RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR
Sbjct: 121 RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR 180
Query: 181 HLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL 229
HLQLCFQ GTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL
Sbjct: 181 HLQLCFQAGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL 229
>gi|239746366 PREDICTED: hypothetical protein XP_002343738 [Homo
sapiens]
Length = 522
Score = 40.0 bits (92), Expect = 0.002
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 57 PVCSPWTCVRRKVAVSLSPEQQVGSDEAEQAPQRPLPAQQLVGAAAQPQHRLPEQP---G 113
PVC+ W C R +V L P+ + +RP+ + + + + LP P
Sbjct: 329 PVCTRWCCRRLEVCAKLLPQTPQAWGLSPVKARRPVCTRWWMASREERLKALPHSPHCLS 388
Query: 114 YRGRRPARGLLHL 126
RGR P RGL H+
Sbjct: 389 LRGRAPGRGLFHV 401
>gi|15011916 nucleolar protein family A, member 1 [Homo sapiens]
Length = 217
Score = 37.4 bits (85), Expect = 0.011
Identities = 21/39 (53%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 189 GTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLG 227
G G G R G G G R GRGGGGG R G R G R G
Sbjct: 179 GRGGGGRGGGRGGGFRGGRGGGGGGFR-GGRGGGFRGRG 216
Score = 30.8 bits (68), Expect = 1.0
Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 192 PGARAGAPGCGCRRGRGGG-GGRSRSGARTAGHR 224
P G P G R GRGGG GG R G R G R
Sbjct: 161 PPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFR 194
Score = 28.9 bits (63), Expect = 3.8
Identities = 16/36 (44%), Positives = 16/36 (44%)
Query: 189 GTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHR 224
G G G R G G G R G GGG R G G R
Sbjct: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFR 205
>gi|9506713 nucleolar protein family A, member 1 [Homo sapiens]
Length = 217
Score = 37.4 bits (85), Expect = 0.011
Identities = 21/39 (53%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 189 GTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLG 227
G G G R G G G R GRGGGGG R G R G R G
Sbjct: 179 GRGGGGRGGGRGGGFRGGRGGGGGGFR-GGRGGGFRGRG 216
Score = 30.8 bits (68), Expect = 1.0
Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 192 PGARAGAPGCGCRRGRGGG-GGRSRSGARTAGHR 224
P G P G R GRGGG GG R G R G R
Sbjct: 161 PPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFR 194
Score = 28.9 bits (63), Expect = 3.8
Identities = 16/36 (44%), Positives = 16/36 (44%)
Query: 189 GTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHR 224
G G G R G G G R G GGG R G G R
Sbjct: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFR 205
>gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo
sapiens]
Length = 944
Score = 37.0 bits (84), Expect = 0.014
Identities = 39/115 (33%), Positives = 50/115 (43%), Gaps = 7/115 (6%)
Query: 116 GRRPARGL-LHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVL 174
GRR G L LQ + L S L + + L G RR++ L GR R G
Sbjct: 650 GRRIGPGARLVLQEQLLAAESLLAAIAAVHQLHRGLR---RRQKELRHHGRGRGRRGG-- 704
Query: 175 RRRRARHLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL 229
RR RA L++ Q G AG PG G R GRGGG R +++G +
Sbjct: 705 RRGRAVGLEVPLQVGVAHEDLAGLPGLGGR-GRGGGTRGGGGAVRALVQQQVGGV 758
>gi|110611170 ADAM metallopeptidase with thrombospondin type 1
motif, 17 preproprotein [Homo sapiens]
Length = 1095
Score = 36.2 bits (82), Expect = 0.024
Identities = 37/105 (35%), Positives = 40/105 (38%), Gaps = 8/105 (7%)
Query: 108 LPEQPGYRGRRPARGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSR 167
LP PG R RR R P A R R LLL LP G L RR L
Sbjct: 53 LPAAPGPRRRRRPR----TPPAAPRARPGERALLLHLPAFGRDLYLQLRRDLRFLSRGFE 108
Query: 168 ASLLGVLRRRRARHLQLCFQTGT---GPGARAGAPGCGCRRGRGG 209
G RRR R +LCF +G PG+ CG G G
Sbjct: 109 VEEAGAARRR-GRPAELCFYSGRVLGHPGSLVSLSACGAAGGLVG 152
>gi|4506321 protein tyrosine phosphatase, receptor type, N precursor
[Homo sapiens]
Length = 979
Score = 36.2 bits (82), Expect = 0.024
Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Query: 73 LSPEQQVGSDEAEQAPQRPLPAQQLV------GAAAQPQHRLPEQP-GYRGRRPARGLLH 125
L P + D + AP+RP PA +L+ G+A QHRLP+ P G G + L
Sbjct: 116 LRPPEPRPRDRSGLAPKRPGPAGELLLQDIPTGSAPAAQHRLPQPPVGKGGAGASSSLSP 175
Query: 126 LQPRALRRPSFLRFLLL 142
LQ L P L LLL
Sbjct: 176 LQAELL--PPLLEHLLL 190
>gi|28875797 small protein rich in arginine and glycine [Homo
sapiens]
Length = 248
Score = 35.8 bits (81), Expect = 0.031
Identities = 51/167 (30%), Positives = 66/167 (39%), Gaps = 36/167 (21%)
Query: 65 VRRKVAVSLSPEQQVGSDEAEQAPQRPLPA--QQLVGAAAQP--QHRLPEQPGYRGRRPA 120
V+ + + S +Q++G + RP+ A + +G P Q LP + G RG R
Sbjct: 65 VQAALKLKQSLKQRLGKSNIQARLGRPIGALARGAIGGRGLPIIQRGLP-RGGLRGGRAT 123
Query: 121 RGLLHLQPRALRRPSFLRFLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR 180
R LL G R + LL GGR+ A +G LRR R
Sbjct: 124 RTLLRG-------------------------GMSLRGQNLLRGGRAVAPRMG-LRRGGVR 157
Query: 181 HLQLCFQTGTGPGA--RAGAPGCG---CRRGRGGGGGRSRSGARTAG 222
+ G G GA R G G G RGRGG GGR R R G
Sbjct: 158 GRGGPGRGGLGRGAMGRGGIGGRGRGMIGRGRGGFGGRGRGRGRGRG 204
>gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo
sapiens]
Length = 334
Score = 35.4 bits (80), Expect = 0.041
Identities = 41/134 (30%), Positives = 50/134 (37%), Gaps = 13/134 (9%)
Query: 104 PQHRLPEQPGYRGRRPARGLL---HLQPRALRRPSFLRFLLLLLPLCGGCL--GRWRRRR 158
P+ P + RGRR A GL+ HL R L+ +PL L GR
Sbjct: 128 PRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPST 187
Query: 159 RLLLGGRSRASLLGVLRRRRARHLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGRSR--- 215
R +A+LLG R C GA AGA G +GRG G R
Sbjct: 188 RACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARG----QGRGAAAGPERPPH 243
Query: 216 -SGARTAGHRRLGA 228
G R A +GA
Sbjct: 244 VQGRRPAPRGAVGA 257
>gi|239743103 PREDICTED: hypothetical protein XP_002342755 [Homo
sapiens]
Length = 329
Score = 35.4 bits (80), Expect = 0.041
Identities = 41/134 (30%), Positives = 50/134 (37%), Gaps = 13/134 (9%)
Query: 104 PQHRLPEQPGYRGRRPARGLL---HLQPRALRRPSFLRFLLLLLPLCGGCL--GRWRRRR 158
P+ P + RGRR A GL+ HL R L+ +PL L GR
Sbjct: 123 PRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPST 182
Query: 159 RLLLGGRSRASLLGVLRRRRARHLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGRSR--- 215
R +A+LLG R C GA AGA G +GRG G R
Sbjct: 183 RACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARG----QGRGAAAGPERPPH 238
Query: 216 -SGARTAGHRRLGA 228
G R A +GA
Sbjct: 239 VQGRRPAPRGAVGA 252
>gi|239508758 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 35.4 bits (80), Expect = 0.041
Identities = 41/134 (30%), Positives = 50/134 (37%), Gaps = 13/134 (9%)
Query: 104 PQHRLPEQPGYRGRRPARGLL---HLQPRALRRPSFLRFLLLLLPLCGGCL--GRWRRRR 158
P+ P + RGRR A GL+ HL R L+ +PL L GR
Sbjct: 123 PRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGLRPPALVPVPLATPLLLEGRSEPST 182
Query: 159 RLLLGGRSRASLLGVLRRRRARHLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGRSR--- 215
R +A+LLG R C GA AGA G +GRG G R
Sbjct: 183 RACAVSGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARG----QGRGAAAGPERPPH 238
Query: 216 -SGARTAGHRRLGA 228
G R A +GA
Sbjct: 239 VQGRRPAPRGAVGA 252
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 35.0 bits (79), Expect = 0.053
Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 12/79 (15%)
Query: 149 GCLGRWRRRRRLLLGGRSRASLLGVLRRRRAR------------HLQLCFQTGTGPGARA 196
G GR RRRRR RS AS RRR R + +G+G GA
Sbjct: 381 GGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPG 440
Query: 197 GAPGCGCRRGRGGGGGRSR 215
P G RG GG G R++
Sbjct: 441 PGPEPGSERGHGGHGKRAK 459
>gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens]
Length = 540
Score = 35.0 bits (79), Expect = 0.053
Identities = 20/39 (51%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 191 GPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGAL 229
GPG RAG G + GGGG RS A TAG R + AL
Sbjct: 2 GPGERAGGGGDAGKGNAAGGGGGGRS-ATTAGSRAVSAL 39
>gi|239756845 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 34.3 bits (77), Expect = 0.091
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 173 VLRRRRARHLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGA 228
V+ + AR LQ + G G A PG G GGGGG SG R+A RR GA
Sbjct: 2 VVPTQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSA-QRRAGA 56
>gi|169211844 PREDICTED: hypothetical protein [Homo sapiens]
Length = 193
Score = 34.3 bits (77), Expect = 0.091
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 173 VLRRRRARHLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGA 228
V+ + AR LQ + G G A PG G GGGGG SG R+A RR GA
Sbjct: 2 VVPTQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSA-QRRAGA 56
>gi|169211031 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 34.3 bits (77), Expect = 0.091
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 173 VLRRRRARHLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRRLGA 228
V+ + AR LQ + G G A PG G GGGGG SG R+A RR GA
Sbjct: 2 VVPTQPARRLQPRKSSFPGDGDEAPGPGGGEGAAAGGGGGGLGSGGRSA-QRRAGA 56
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 34.3 bits (77), Expect = 0.091
Identities = 36/134 (26%), Positives = 49/134 (36%), Gaps = 19/134 (14%)
Query: 92 LPAQQLVGAAAQPQHRLPEQPGYRGRRPARGLLHLQPRALRRPSFLRFLL--LLLPLCGG 149
+PA +V QH +P + L LQP RRP + F+L + + G
Sbjct: 542 VPAAVVVACLFYEQHN---RPRWEATHNCPCLRDLQPDQARRPDYAVFMLKYFMCLVVGI 598
Query: 150 CLGRWRRRRRLLLGGRSRASLLGVLRRRRARHLQLCFQT-GTGPGARAGAPGCGCRRGRG 208
G W + L RS + + C+ + G G AGA G G G
Sbjct: 599 TSGVWVWSGKTLESWRSLCT-------------RCCWASKGAAVGGGAGATAAGGGGGPG 645
Query: 209 GGGGRSRSGARTAG 222
GGGG G G
Sbjct: 646 GGGGGGPGGGGGPG 659
>gi|239754516 PREDICTED: hypothetical protein [Homo sapiens]
Length = 334
Score = 33.9 bits (76), Expect = 0.12
Identities = 43/136 (31%), Positives = 51/136 (37%), Gaps = 17/136 (12%)
Query: 104 PQHRLPEQPGYRGRRPARGLL---HLQPRALR----RPSFLRFLLLLLPLCGGCLGRWRR 156
P+ P + RGRR A GL+ HL R RP L + L PL GR
Sbjct: 128 PRRHAPPRKQLRGRRGAAGLVSAGHLGREPPRGGGPRPPALVPVPLATPLL--LEGRSEP 185
Query: 157 RRRLLLGGRSRASLLGVLRRRRARHLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGRSR- 215
R +A+LLG R C GA AGA G +GRG G R
Sbjct: 186 STRACAVSGRQAALLGAHVRPAPDRAARCAPRAKKAGANAGARG----QGRGAAAGPERP 241
Query: 216 ---SGARTAGHRRLGA 228
G R A +GA
Sbjct: 242 PHVQGRRPAPRGAVGA 257
>gi|239748639 PREDICTED: hypothetical protein XP_002346752 [Homo
sapiens]
Length = 286
Score = 33.9 bits (76), Expect = 0.12
Identities = 28/68 (41%), Positives = 29/68 (42%), Gaps = 14/68 (20%)
Query: 163 GGRSRASLLGVLRRRRARHLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGRSRSGART-A 221
GG + A LG R G G G G G G RRGRGGG R G R A
Sbjct: 160 GGGAEAQFLGGGRS----------SAGGGGGGGGGGGGRGSRRGRGGG---ERGGPRAQA 206
Query: 222 GHRRLGAL 229
RRL AL
Sbjct: 207 VRRRLSAL 214
>gi|157743247 F-box protein 45 [Homo sapiens]
Length = 286
Score = 33.9 bits (76), Expect = 0.12
Identities = 17/33 (51%), Positives = 18/33 (54%)
Query: 192 PGARAGAPGCGCRRGRGGGGGRSRSGARTAGHR 224
PGA A + G GC G G G S SGA AG R
Sbjct: 6 PGAGAASGGAGCSGGGAGAGAGSGSGAAGAGGR 38
>gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo
sapiens]
Length = 284
Score = 33.5 bits (75), Expect = 0.16
Identities = 22/42 (52%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 189 GTGPGARAGAPGCGCRRGRGGGGGRSRSGART-AGHRRLGAL 229
G G G G G G RRGRGGG R G R A RRL AL
Sbjct: 174 GGGGGGGGGGGGRGSRRGRGGG---ERGGPRAQAVRRRLSAL 212
Score = 30.8 bits (68), Expect = 1.0
Identities = 16/35 (45%), Positives = 16/35 (45%)
Query: 191 GPGARAGAPGCGCRRGRGGGGGRSRSGARTAGHRR 225
GPGA GA G R GGGG G G RR
Sbjct: 156 GPGAGGGAERGGSGRSSAGGGGGGGGGGGGRGSRR 190
>gi|7706143 armadillo repeat containing, X-linked 1 [Homo sapiens]
Length = 453
Score = 33.5 bits (75), Expect = 0.16
Identities = 17/36 (47%), Positives = 20/36 (55%)
Query: 187 QTGTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAG 222
+ GT G R AP C GRGGG +RSG+R G
Sbjct: 128 RVGTISGNRTLAPSLPCPGGRGGGCHPTRSGSRAGG 163
>gi|169168202 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 33.1 bits (74), Expect = 0.20
Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 15/126 (11%)
Query: 89 QRPLPAQQLVGAAAQPQHRLP------EQPGYRGRRPARGLLHLQPRALRRPSFLR---- 138
QR A++++ P+ RLP E PG+ R GL P+ R S+ R
Sbjct: 244 QRAAGAERVLNNGRGPRSRLPGLAGGVEPPGWSRERAGAGLSRDSPQVPRSGSWARPCRE 303
Query: 139 ----FLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRARHLQLCFQTGTGPGA 194
+L L L R RRR GG + + + R R L+ GT A
Sbjct: 304 QGHPAVLALQSPAPPSLARAAARRRGP-GGATEPGFVTLAFRSRLPLLRSPGPEGTSDAA 362
Query: 195 RAGAPG 200
RA APG
Sbjct: 363 RAPAPG 368
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 33.1 bits (74), Expect = 0.20
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 185 CFQT--GTGPGARAGAPGCGCRRGRGGGGGRSRSGARTAG 222
C +T G G G +G GCG G G GGG S SG +G
Sbjct: 16 CVKTSGGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSG 55
Score = 27.7 bits (60), Expect = 8.5
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 163 GGRSRASLLGVLRRRRARHLQLCFQTGTGPGARAG--APGCGCRRGRGGGGGRSRSGART 220
GG S S G + ++ Q G G+ G + G GC GGGGG S G +
Sbjct: 198 GGSSGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGGSGGSGCFSS-GGGGGSSGCGGGS 256
Query: 221 AG 222
+G
Sbjct: 257 SG 258
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 32.7 bits (73), Expect = 0.26
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 155 RRRRRLLLGGRSRASLLGVLR-RRRARHLQLCFQTGTGPGARAGAPGCGCRRGRGGGGGR 213
RRRR G + + +G+ +RR + +L G G A + G G + RG GG +
Sbjct: 690 RRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRG---GGGAKSRGSGGAKSRGSGGAK 746
Query: 214 SRSGARTAGHRRLG 227
SRSG + A + G
Sbjct: 747 SRSGKKAAASKSHG 760
>gi|169167967 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 32.7 bits (73), Expect = 0.26
Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 15/126 (11%)
Query: 89 QRPLPAQQLVGAAAQPQHRLP------EQPGYRGRRPARGLLHLQPRALRRPSFLR---- 138
QR A++++ P+ RLP E PG+ R GL P+ R S+ R
Sbjct: 244 QRAAGAERVLDNGRGPRSRLPGLAGGVEPPGWSRERAGAGLSRDSPQVPRSGSWARPCRE 303
Query: 139 ----FLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRARHLQLCFQTGTGPGA 194
+L L L R RRR GG + + + R R L+ GT A
Sbjct: 304 QGHPAVLALQSPAPPSLARAAARRRGP-GGATEPGFVTLAFRSRLPLLRSPGPEGTSDAA 362
Query: 195 RAGAPG 200
RA APG
Sbjct: 363 RAPAPG 368
>gi|169167681 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 32.7 bits (73), Expect = 0.26
Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 15/126 (11%)
Query: 89 QRPLPAQQLVGAAAQPQHRLP------EQPGYRGRRPARGLLHLQPRALRRPSFLR---- 138
QR A++++ P+ RLP E PG+ R GL P+ R S+ R
Sbjct: 244 QRAAGAERVLDNGRGPRSRLPGLAGGVEPPGWSRERAGAGLSRDSPQVPRSGSWARPCRE 303
Query: 139 ----FLLLLLPLCGGCLGRWRRRRRLLLGGRSRASLLGVLRRRRARHLQLCFQTGTGPGA 194
+L L L R RRR GG + + + R R L+ GT A
Sbjct: 304 QGHPAVLALQSPAPPSLARAAARRRGP-GGATEPGFVTLAFRSRLPLLRSPGPEGTSDAA 362
Query: 195 RAGAPG 200
RA APG
Sbjct: 363 RAPAPG 368
>gi|6912372 forkhead box D3 [Homo sapiens]
Length = 478
Score = 32.7 bits (73), Expect = 0.26
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 189 GTGPGARAGAPGC-GCRRGRGGGGGRSRSGARTAGHRRLGAL 229
G GPG GAP GC+ G GG G + G AG G L
Sbjct: 89 GAGPGGDVGAPEADGCKGGVGGEEGGASGGGPGAGSGSAGGL 130
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.140 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,106,884
Number of Sequences: 37866
Number of extensions: 552906
Number of successful extensions: 6297
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 141
Number of HSP's that attempted gapping in prelim test: 5569
Number of HSP's gapped (non-prelim): 716
length of query: 229
length of database: 18,247,518
effective HSP length: 99
effective length of query: 130
effective length of database: 14,498,784
effective search space: 1884841920
effective search space used: 1884841920
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.