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Search of human proteins with 239742481
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo
sapiens]
(359 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo ... 736 0.0
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 716 0.0
gi|239748510 PREDICTED: hypothetical protein XP_002346712 [Homo ... 672 0.0
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 57 3e-08
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 57 3e-08
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 54 2e-07
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 54 3e-07
gi|19924099 synapsin I isoform Ia [Homo sapiens] 53 5e-07
gi|19924097 synapsin I isoform Ib [Homo sapiens] 53 5e-07
gi|150170670 piccolo isoform 2 [Homo sapiens] 52 8e-07
gi|150378539 piccolo isoform 1 [Homo sapiens] 52 8e-07
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 52 8e-07
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 52 8e-07
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 52 1e-06
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ... 52 1e-06
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ... 52 1e-06
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s... 52 1e-06
gi|153792074 proline rich 12 [Homo sapiens] 51 1e-06
gi|118402590 myosin XV [Homo sapiens] 49 5e-06
gi|13273315 homeobox B4 [Homo sapiens] 49 7e-06
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin... 49 7e-06
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 49 9e-06
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 49 9e-06
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 48 1e-05
gi|236459851 ubinuclein 2 [Homo sapiens] 48 2e-05
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens] 47 2e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 47 2e-05
gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3 [... 47 3e-05
gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1 [... 47 3e-05
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 47 3e-05
>gi|239742481 PREDICTED: hypothetical protein XP_002342546 [Homo
sapiens]
Length = 359
Score = 736 bits (1899), Expect = 0.0
Identities = 359/359 (100%), Positives = 359/359 (100%)
Query: 1 MTPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIP 60
MTPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIP
Sbjct: 1 MTPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIP 60
Query: 61 GNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTR 120
GNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTR
Sbjct: 61 GNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTR 120
Query: 121 PPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSPRPVRGPHPRRAV 180
PPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSPRPVRGPHPRRAV
Sbjct: 121 PPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSPRPVRGPHPRRAV 180
Query: 181 VVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRP 240
VVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRP
Sbjct: 181 VVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRP 240
Query: 241 PRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHL 300
PRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHL
Sbjct: 241 PRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHL 300
Query: 301 GSLLPSSSGGARLGDAAGTTHFQPAHLSHAAAPASLTDHSFARPLVTEHLAHGVSGAGD 359
GSLLPSSSGGARLGDAAGTTHFQPAHLSHAAAPASLTDHSFARPLVTEHLAHGVSGAGD
Sbjct: 301 GSLLPSSSGGARLGDAAGTTHFQPAHLSHAAAPASLTDHSFARPLVTEHLAHGVSGAGD 359
>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 716 bits (1849), Expect = 0.0
Identities = 357/389 (91%), Positives = 357/389 (91%), Gaps = 30/389 (7%)
Query: 1 MTPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIP 60
MTPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIP
Sbjct: 1 MTPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIP 60
Query: 61 GNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTR 120
GNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTR
Sbjct: 61 GNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTR 120
Query: 121 PPPQAVQPRPSEPTPGSEALPPGSLPEAA------------------------------Q 150
PPPQAVQPRPSEPTPGSEALPPGSLPE Q
Sbjct: 121 PPPQAVQPRPSEPTPGSEALPPGSLPEGEPRPYALPPRESPAPRPFRWGDPFSPAPPRPQ 180
Query: 151 PPSRPAAQPPSRPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLA 210
PPSRPAAQPPSRPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLA
Sbjct: 181 PPSRPAAQPPSRPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLA 240
Query: 211 PQRGRGGLLLVVLHAATVQRPRLGRGPSRPPRGPVGVCRPQVAQRQRLARVCVRSLPGNR 270
PQRGRGGLLLVVLHAATVQRPRLGRGPSRPPRGPVGVCRPQVAQRQRLARVCVRSLPGNR
Sbjct: 241 PQRGRGGLLLVVLHAATVQRPRLGRGPSRPPRGPVGVCRPQVAQRQRLARVCVRSLPGNR 300
Query: 271 RLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSGGARLGDAAGTTHFQPAHLSHA 330
RLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSGGARLGDAAGTTHFQPAHLSHA
Sbjct: 301 RLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSGGARLGDAAGTTHFQPAHLSHA 360
Query: 331 AAPASLTDHSFARPLVTEHLAHGVSGAGD 359
AAPASLTDHSFARPLVTEHLAHGVSGAGD
Sbjct: 361 AAPASLTDHSFARPLVTEHLAHGVSGAGD 389
>gi|239748510 PREDICTED: hypothetical protein XP_002346712 [Homo
sapiens]
Length = 336
Score = 672 bits (1733), Expect = 0.0
Identities = 335/359 (93%), Positives = 335/359 (93%), Gaps = 23/359 (6%)
Query: 1 MTPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIP 60
MTPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIP
Sbjct: 1 MTPLPLHLEQDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIP 60
Query: 61 GNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTR 120
GNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTR
Sbjct: 61 GNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTR 120
Query: 121 PPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSPRPVRGPHPRRAV 180
PPPQAVQPRPSEPTPGSEALPPGSLPE VRGPHPRRAV
Sbjct: 121 PPPQAVQPRPSEPTPGSEALPPGSLPE-----------------------VRGPHPRRAV 157
Query: 181 VVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRP 240
VVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSR
Sbjct: 158 VVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRQ 217
Query: 241 PRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHL 300
PRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHL
Sbjct: 218 PRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHL 277
Query: 301 GSLLPSSSGGARLGDAAGTTHFQPAHLSHAAAPASLTDHSFARPLVTEHLAHGVSGAGD 359
GSLLPSSSGGARLGDAAGTTHFQPAHLSHAAAPASLTDHSFARPLVTEHLAHGVSGAGD
Sbjct: 278 GSLLPSSSGGARLGDAAGTTHFQPAHLSHAAAPASLTDHSFARPLVTEHLAHGVSGAGD 336
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 56.6 bits (135), Expect = 3e-08
Identities = 81/313 (25%), Positives = 105/313 (33%), Gaps = 59/313 (18%)
Query: 101 LPVSPADPAAPPSSPHA---PTRPPPQAVQP----RPSEPTPGSEALPPGSLPEAAQPPS 153
L V P+ PA+PP SP A P PPP A P +P P + A PP L PP+
Sbjct: 479 LQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPP--LQALPSPPA 536
Query: 154 RPAAQPPSRPAFRSPR-PVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQ 212
Q P P+ P P+ P P+ V+A +Q P A L+ R P P
Sbjct: 537 SFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPL-LQVPPSPPASPTLQAPRRPPTPGPD 595
Query: 213 RGRGGLLLVVLHA------------ATVQRPRL-----------------------GRGP 237
G L + A +T+ P L G
Sbjct: 596 TSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAA 655
Query: 238 SRPPRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATL------PS 291
S PP + C P R + R PG L G T+ S
Sbjct: 656 SPPPDAELAACHPAAWSRGPAPPLAFRGAPG-APLPWPPATGPGSADGLCTIYETEGPES 714
Query: 292 SLPAPRLHLGSLLPSSSGG-ARLGDAAGTTHFQP-----AHLSHAAAPASLTDHSFARPL 345
+ PAP P +SGG A G AG + P L A AS+ H +R L
Sbjct: 715 ATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTL 774
Query: 346 VTEHLAHGVSGAG 358
+ G+G
Sbjct: 775 LLAAAEGAAGGSG 787
Score = 43.9 bits (102), Expect = 2e-04
Identities = 55/180 (30%), Positives = 68/180 (37%), Gaps = 36/180 (20%)
Query: 30 LALNLLLFLPLAAGGRCRVPSGLRRLADPI---PGNARAGVAR-TEQRDHS-QSSPPCRR 84
L L LPLA PS L+ L P P A + T Q HS SPP
Sbjct: 330 LTCQLATPLPLAPPSPSAPPS-LQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSP 388
Query: 85 LASYSFWSSAPWRELTLPVSPADPAAPPSSPHA---------------------PTRPPP 123
LA+ + L P+ PA+PP SP A P PP
Sbjct: 389 LATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPV 448
Query: 124 QAVQPRPSEP------TPGSEALPPGSLPEAAQPPSRPAAQPPS---RPAFRSPRPVRGP 174
QA P+ P TP S+A P + P PPS PA+ P S P ++P P+ P
Sbjct: 449 QAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP 508
Score = 42.0 bits (97), Expect = 9e-04
Identities = 73/268 (27%), Positives = 95/268 (35%), Gaps = 59/268 (22%)
Query: 78 SSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSS----------PHAPTRP-PPQAV 126
++P L+S + +P L P PA P SS P AP P P ++
Sbjct: 292 AAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSL 351
Query: 127 QPRPSEP-TPGSEA---------------LP-PGSLPEAAQPPSRPAA-------QPPSR 162
Q PS P TP S+A LP P P A PP P A PPS
Sbjct: 352 QTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSP 411
Query: 163 PAFRSPRPVRGPHPRRAVVVAVLF-----------GVQAPRRDVAEGGLRRDGRRPGLAP 211
PA P+ P P+ +AV VQAP A + P AP
Sbjct: 412 PASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAP 471
Query: 212 QRGRGGLLLVVLH--AATVQRPRLGRGPSRPP---RGPVGVCRPQVAQRQRLARVCVRSL 266
L V A+ P P PP P+ + +P LA +++L
Sbjct: 472 PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQAL 531
Query: 267 PGNRRLATRSCPAAFPLQGGATLPSSLP 294
P S PA+FP Q + +SLP
Sbjct: 532 P--------SPPASFPGQAPFSPSASLP 551
Score = 40.4 bits (93), Expect = 0.002
Identities = 57/219 (26%), Positives = 80/219 (36%), Gaps = 33/219 (15%)
Query: 111 PPSSPHA-PTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSPR 169
P S+P A PTR + + S P P E A P + P S P S
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRP-------PASGRGERAPPAKNTSPGPVSSPGRASGT 123
Query: 170 PVRGPHPRRAV------VVAVLFGVQAPRRDVAEGGLRRD--GRRPG-----LAPQRGRG 216
GP ++ + VA +AP+R G RRD G PG +A +
Sbjct: 124 TRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAA 183
Query: 217 GLLLVVLHAATVQRPRLGRGPSRPPRGPV------GVCRPQVAQRQRLARVCVRSLPGNR 270
G + + A RP R P+ PR V P A R+R + P +R
Sbjct: 184 GTEVGLPRPAPSARP---RPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASR 240
Query: 271 RLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSG 309
L++ + P + P + G PS+ PR P G
Sbjct: 241 SLSSSATPLSSPARSG---PSARGTPRAPAHPSQPKPKG 276
Score = 39.7 bits (91), Expect = 0.004
Identities = 79/302 (26%), Positives = 108/302 (35%), Gaps = 48/302 (15%)
Query: 49 PSGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRL----------ASYSFWSSAPWRE 98
P+ R P G R V+ + ++ SP RR AS S SSA
Sbjct: 192 PAPSARPRPPTEG-PRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSA--TP 248
Query: 99 LTLPVSPADPA-APPSSPHAPTRPPPQAVQP-RPSEPTPGSEALPPGSLPEAAQP---PS 153
L+ P A P +P P++P P+ +Q RP + TP + P P ++ P PS
Sbjct: 249 LSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPS 308
Query: 154 RPAA----QPPSRPA----------FRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGG 199
AA PP+ PA +P P+ P P + L A A
Sbjct: 309 PSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTS 368
Query: 200 LRRDGRR--------PGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRPPRGPVGVCRPQ 251
L + P L+P L +Q P P+ PP P+ PQ
Sbjct: 369 LGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAP--PSPPASPPLSPLATPSPQ 426
Query: 252 V--AQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPS----SLPAPRLHLGSLLP 305
A L + P A S PA+ P+ AT PS SL AP L + P
Sbjct: 427 APNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 486
Query: 306 SS 307
+S
Sbjct: 487 AS 488
Score = 32.3 bits (72), Expect = 0.67
Identities = 33/136 (24%), Positives = 49/136 (36%), Gaps = 17/136 (12%)
Query: 99 LTLPVSPADPAAPPSSPHAPTRPP------------PQAVQPRPSEPTPGSEALPPGSLP 146
LTL ++P P P SP + P P+ ++ S P G+ A PP
Sbjct: 603 LTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAE 662
Query: 147 EAAQPPSRPAAQPPSRPAFRSP--RPVRGP---HPRRAVVVAVLFGVQAPRRDVAEGGLR 201
AA P+ + P AFR P+ P P A + ++ + P G
Sbjct: 663 LAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGAL 722
Query: 202 RDGRRPGLAPQRGRGG 217
G PG + + G
Sbjct: 723 DPGPSPGTSGGKAAAG 738
Score = 29.3 bits (64), Expect = 5.7
Identities = 60/237 (25%), Positives = 75/237 (31%), Gaps = 36/237 (15%)
Query: 120 RPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPS------RPAFRSPRPVRG 173
RP P A RP PT G + + PS A + PS RPA RS
Sbjct: 191 RPAPSA---RPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSAT 247
Query: 174 PHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRL 233
P A R + G R P +G L L V PR
Sbjct: 248 PLSSPA------------RSGPSARGTPRAPAHPSQPKPKG-----LQALRPPQVTPPRK 290
Query: 234 GRGPSRPP--RGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPS 291
P+ P P+ P A L +LP ++ +C A PL PS
Sbjct: 291 DAAPALGPLSSSPLATPSPSAA----LQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPS 346
Query: 292 SLPA-PRLHLGSLLPSSSGGARLGDAA--GTTHFQPA-HLSHAAAPASLTDHSFARP 344
+ P+ L P S LG T F P+ LS A P + A P
Sbjct: 347 APPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALP 403
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 56.6 bits (135), Expect = 3e-08
Identities = 81/313 (25%), Positives = 105/313 (33%), Gaps = 59/313 (18%)
Query: 101 LPVSPADPAAPPSSPHA---PTRPPPQAVQP----RPSEPTPGSEALPPGSLPEAAQPPS 153
L V P+ PA+PP SP A P PPP A P +P P + A PP L PP+
Sbjct: 440 LQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPP--LQALPSPPA 497
Query: 154 RPAAQPPSRPAFRSPR-PVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQ 212
Q P P+ P P+ P P+ V+A +Q P A L+ R P P
Sbjct: 498 SFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPL-LQVPPSPPASPTLQAPRRPPTPGPD 556
Query: 213 RGRGGLLLVVLHA------------ATVQRPRL-----------------------GRGP 237
G L + A +T+ P L G
Sbjct: 557 TSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAA 616
Query: 238 SRPPRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATL------PS 291
S PP + C P R + R PG L G T+ S
Sbjct: 617 SPPPDAELAACHPAAWSRGPAPPLAFRGAPG-APLPWPPATGPGSADGLCTIYETEGPES 675
Query: 292 SLPAPRLHLGSLLPSSSGG-ARLGDAAGTTHFQP-----AHLSHAAAPASLTDHSFARPL 345
+ PAP P +SGG A G AG + P L A AS+ H +R L
Sbjct: 676 ATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTL 735
Query: 346 VTEHLAHGVSGAG 358
+ G+G
Sbjct: 736 LLAAAEGAAGGSG 748
Score = 48.9 bits (115), Expect = 7e-06
Identities = 81/303 (26%), Positives = 107/303 (35%), Gaps = 56/303 (18%)
Query: 39 PLAAGGRCRVPS-GLRRLADPIPGNARAGVAR--TEQRDHSQSSPPCRRLASYSFWSSAP 95
P A GG R S L A P+ AR+G + T + S P + L + P
Sbjct: 219 PSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTP 278
Query: 96 WRELTLPV------------SPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEAL--- 140
R+ P SP+ P +P + P T P P A P + + GS L
Sbjct: 279 PRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQAT 338
Query: 141 ------PPGSLPEAAQPPSRPAA-------QPPSRPAFRSPRPVRGPHPRRAVVVAVLF- 186
PP S P A PP P A PPS PA P+ P P+ +AV
Sbjct: 339 HSFLPSPPLS-PLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLL 397
Query: 187 ----------GVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLH--AATVQRPRLG 234
VQAP A + P AP L V A+ P
Sbjct: 398 QAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSAT 457
Query: 235 RGPSRPP---RGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPS 291
P PP P+ + +P LA +++LP S PA+FP Q + +
Sbjct: 458 PPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALP--------SPPASFPGQAPFSPSA 509
Query: 292 SLP 294
SLP
Sbjct: 510 SLP 512
Score = 37.0 bits (84), Expect = 0.027
Identities = 53/219 (24%), Positives = 74/219 (33%), Gaps = 44/219 (20%)
Query: 105 PADPAAPPSSPHAPTRPPPQAVQPRP-SEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRP 163
P + PP+S PP + P P S P S PG L +
Sbjct: 79 PTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQ---------------- 122
Query: 164 AFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRD--GRRPG-----LAPQRGRG 216
+G VA +AP+R G RRD G PG +A +
Sbjct: 123 --------KGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAA 174
Query: 217 GLLLVVLHAATVQRPRLGRGPSRPPRGPV------GVCRPQVAQRQRLARVCVRSLPGNR 270
G + + A RP R P+ PR V P A R+R + P +R
Sbjct: 175 GTEVGLPRPAPSARP---RPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASR 231
Query: 271 RLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSG 309
L++ + P + P + G PS+ PR P G
Sbjct: 232 SLSSSATPLSSPARSG---PSARGTPRAPAHPSQPKPKG 267
Score = 32.3 bits (72), Expect = 0.67
Identities = 33/136 (24%), Positives = 49/136 (36%), Gaps = 17/136 (12%)
Query: 99 LTLPVSPADPAAPPSSPHAPTRPP------------PQAVQPRPSEPTPGSEALPPGSLP 146
LTL ++P P P SP + P P+ ++ S P G+ A PP
Sbjct: 564 LTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAE 623
Query: 147 EAAQPPSRPAAQPPSRPAFRSP--RPVRGP---HPRRAVVVAVLFGVQAPRRDVAEGGLR 201
AA P+ + P AFR P+ P P A + ++ + P G
Sbjct: 624 LAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGAL 683
Query: 202 RDGRRPGLAPQRGRGG 217
G PG + + G
Sbjct: 684 DPGPSPGTSGGKAAAG 699
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 53.9 bits (128), Expect = 2e-07
Identities = 31/78 (39%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 108 PAAPPSSPHAPTRPPPQAV-QPRPSEPTPGSEALPP---GSLPEAAQPPSRPAAQPPSRP 163
P PPS P P PPPQ QP+ P PG PP G+ P+ PP +P PP
Sbjct: 47 PQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGD 106
Query: 164 AFRSPR----PVRGPHPR 177
RSPR +GP P+
Sbjct: 107 KSRSPRSPPGKPQGPPPQ 124
Score = 45.4 bits (106), Expect = 8e-05
Identities = 45/161 (27%), Positives = 55/161 (34%), Gaps = 41/161 (25%)
Query: 102 PVSPADPAAPP-----------SSPHAPTRPPPQAV-QPRPSEPTPGSEALPP---GSLP 146
P P P PP S P P PPPQ QP+ P PG PP G+ P
Sbjct: 277 PPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 336
Query: 147 EAAQPPSRPAAQPP-----SRPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLR 201
+ PP +P PP SR A P +GP + G GG
Sbjct: 337 QGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQE--------GNNPQGPPPPAGGNP 388
Query: 202 RDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRPPR 242
+ + P +G RP G PSRPP+
Sbjct: 389 QQPQAPPAGQPQGP-------------PRPPQGGRPSRPPQ 416
Score = 44.3 bits (103), Expect = 2e-04
Identities = 49/196 (25%), Positives = 63/196 (32%), Gaps = 51/196 (26%)
Query: 58 PIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHA 117
P PG + + + + S SPP + P P P PP P
Sbjct: 154 PPPGKPQGPPPQGDNKSRSSRSPPGKP-------QGPP------PQGGNQPQGPPPPPGK 200
Query: 118 PTRPPPQAVQPRPSEPTPGSEALPP----GSLPEAAQPPSRPAAQPP---SRPAFRSPRP 170
P PPPQ P PG PP A PP +P PP ++P P P
Sbjct: 201 PQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPP 260
Query: 171 --VRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATV 228
+GP P+ G P+ G G+ G PQ G
Sbjct: 261 GKPQGPPPQ---------GGNKPQ------GPPPPGKPQGPPPQGG-------------- 291
Query: 229 QRPRLGRGPSRPPRGP 244
+ R R P P+GP
Sbjct: 292 SKSRSSRSPPGKPQGP 307
Score = 43.5 bits (101), Expect = 3e-04
Identities = 54/206 (26%), Positives = 74/206 (35%), Gaps = 33/206 (16%)
Query: 58 PIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHA 117
P PG + + + + S SPP + P P P PP P
Sbjct: 216 PPPGKPQGPPPQGDNKSQSARSPPGKP-------QGPP------PQGGNQPQGPPPPPGK 262
Query: 118 PTRPPPQAVQPRPSEPTPGSEALPP---GSLPEAAQ-PPSRPAAQPP---SRPAFRSPRP 170
P PPPQ P PG PP GS +++ PP +P PP ++P P P
Sbjct: 263 PQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPP 322
Query: 171 --VRGPHPRRAVVVAVLFGVQAPRRDVAEGGLR-RDGRRPGLAPQ--------RGRGGLL 219
+GP P+ P+ +GG + R R P PQ +G
Sbjct: 323 GKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPP 382
Query: 220 LVVLHAATVQRPRLG--RGPSRPPRG 243
+ Q P G +GP RPP+G
Sbjct: 383 PAGGNPQQPQAPPAGQPQGPPRPPQG 408
Score = 40.4 bits (93), Expect = 0.002
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
Query: 102 PVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPP----GSLPEAAQPPSRPAA 157
P P PP P P PPPQ P PG PP + PP +P
Sbjct: 123 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQG 182
Query: 158 QPP---SRPAFRSPRP--VRGPHPR 177
PP ++P P P +GP P+
Sbjct: 183 PPPQGGNQPQGPPPPPGKPQGPPPQ 207
Score = 40.0 bits (92), Expect = 0.003
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
Query: 102 PVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEA---AQPPSRPAAQ 158
P P PP P P PPPQ P PG PP ++ PP +P
Sbjct: 62 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGP 121
Query: 159 PP---SRPAFRSPRP--VRGPHPR 177
PP ++P P P +GP P+
Sbjct: 122 PPQGGNQPQGPPPPPGKPQGPPPQ 145
Score = 37.7 bits (86), Expect = 0.016
Identities = 31/115 (26%), Positives = 38/115 (33%), Gaps = 39/115 (33%)
Query: 102 PVSPADPAAPPSS----------PHAPTRPPPQ---------------------AVQPRP 130
P P P PP P P PPPQ QP+
Sbjct: 72 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQG 131
Query: 131 SEPTPGSEALPP---GSLPEAAQPPSRPAAQPP-----SRPAFRSPRPVRGPHPR 177
P PG PP G+ P+ PP +P PP SR + P +GP P+
Sbjct: 132 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQ 186
Score = 35.8 bits (81), Expect = 0.061
Identities = 36/139 (25%), Positives = 44/139 (31%), Gaps = 15/139 (10%)
Query: 49 PSGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADP 108
P G + P P G + S SPP + + P P P P
Sbjct: 83 PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGP---PPPPGKP 139
Query: 109 AAPPSS----------PHAPTRPPPQAV-QPRPSEPTPGSEALPPGSLPEAAQPPSRPAA 157
PP P P PPPQ + R S PG PP Q P P
Sbjct: 140 QGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPG 199
Query: 158 QPPSRPAFRSPRPVRGPHP 176
+P P +P +GP P
Sbjct: 200 KPQGPPPQGGNKP-QGPPP 217
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 53.5 bits (127), Expect = 3e-07
Identities = 87/347 (25%), Positives = 112/347 (32%), Gaps = 68/347 (19%)
Query: 78 SSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRP--------PPQAVQPR 129
+SPP A+ + P L V P+ PA+PP SP A P PP V P
Sbjct: 712 ASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPS 771
Query: 130 PSEPTPGSE-ALPPGSLPEAA---------QPPSRPAAQPPSRPAFRSP-RPVRGPHPRR 178
P P S A PP P A PP+ Q P P+ P P+ P P+
Sbjct: 772 PPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQA 831
Query: 179 AVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHA------------A 226
V+A +Q P A L+ R P P G L + A +
Sbjct: 832 PPVLAAPL-LQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSS 890
Query: 227 TVQRPRL-----------------------GRGPSRPPRGPVGVCRPQVAQRQRLARVCV 263
T+ P L G S PP + C P R +
Sbjct: 891 TLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAF 950
Query: 264 RSLPGNRRLATRSCPAAFPLQGGATL------PSSLPAPRLHLGSLLPSSSGG-ARLGDA 316
R PG L G T+ S+ PAP P +SGG A G
Sbjct: 951 RGAPG-APLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAG 1009
Query: 317 AGTTHFQP-----AHLSHAAAPASLTDHSFARPLVTEHLAHGVSGAG 358
AG + P L A AS+ H +R L+ G+G
Sbjct: 1010 AGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSG 1056
Score = 46.6 bits (109), Expect = 3e-05
Identities = 76/295 (25%), Positives = 105/295 (35%), Gaps = 50/295 (16%)
Query: 78 SSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQA----VQPRPSEP 133
++P L+S + +P PV P D AA P P PP P PS P
Sbjct: 292 AAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAP 351
Query: 134 TPGSEALP-PGSLPEAAQPPSRPAAQPPSRPAFRSPRPVRGPHPRRAVVVAVLFGVQAPR 192
P + LP P + P + PPS + P+ ++ P++ PH + +QAP
Sbjct: 352 -PSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSP------SLQAPP 404
Query: 193 RDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGR----GPSRPPRGPVGVC 248
+A L+ G L H+ PR + PSRP P
Sbjct: 405 SPLALSSLQ---------ATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTP---- 451
Query: 249 RPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLP-----SSLP--APRLHLG 301
P Q SLP + L T PA PL T+ SSL +P+ L
Sbjct: 452 -PDSPPLQ-----APLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLS 505
Query: 302 SLL------PSSSGGARLGDAAGTTHFQPAHLSHAAAPASLTDHSFARPLVTEHL 350
SL+ SS L + P + AP L + + PL T HL
Sbjct: 506 SLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPL--QTASAPLTTPHL 558
Score = 45.4 bits (106), Expect = 8e-05
Identities = 46/147 (31%), Positives = 58/147 (39%), Gaps = 32/147 (21%)
Query: 27 DPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLA 86
D AL L PLA PSG + P P NA + T PP LA
Sbjct: 291 DAAPALGPLSSSPLATPS----PSGTKARPVPPPDNAATPLPAT--------LPPSPPLA 338
Query: 87 SYSFWSSAPWRELTLPVSPADPAAPPS---SPHAPTRPPPQA---VQPRPSEPTPGSEAL 140
+ LP++P P+APPS P P PP QA + P + P + +
Sbjct: 339 T------------PLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTI 386
Query: 141 PPGSLPEAAQPPSRPAAQPPSRPAFRS 167
PP +P + PS A PPS A S
Sbjct: 387 PPIQVPHSLTSPSLQA--PPSPLALSS 411
Score = 44.3 bits (103), Expect = 2e-04
Identities = 64/222 (28%), Positives = 88/222 (39%), Gaps = 44/222 (19%)
Query: 78 SSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSP-HAPTRPPPQAVQPRPSEPTPG 136
+SPP LA+ S AP L + + A + PPS P AP PP A P TP
Sbjct: 638 ASPPLSPLATPS--PQAP-NALAVHLLQAPFSPPPSPPVQAPFSPP--ASPPVSPSATPP 692
Query: 137 SEALPPGSLPEAAQPPSRPAAQPPS---RPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRR 193
S+A P + P PPS PA+ P S P ++P P+ P +Q P
Sbjct: 693 SQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP------------PLQVPPS 740
Query: 194 DVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRPPRGPVG-VCRPQV 252
A + P P +L A +Q P PS P P+ + +P
Sbjct: 741 PPASPPMSPSATPPPRVPP---------LLAAPPLQVP-----PSPPASLPMSPLAKPPP 786
Query: 253 AQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLP 294
LA +++LP S PA+FP Q + +SLP
Sbjct: 787 QAPPALATPPLQALP--------SPPASFPGQAPFSPSASLP 820
Score = 43.5 bits (101), Expect = 3e-04
Identities = 60/223 (26%), Positives = 76/223 (34%), Gaps = 24/223 (10%)
Query: 76 SQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTP 135
S ++PP L S + P + + P++ PP P + PP + P E TP
Sbjct: 529 SLTTPPLENLPSLA---PPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPE-TP 584
Query: 136 GSEALPPGSLP-EAAQPPSRPAAQPPSRPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRD 194
S A PP P A PP + PP P +P P P L +QAP
Sbjct: 585 SSIATPPPQAPPALASPPLQGLPSPPLSP-LATPPPQAPP-------XLALPPLQAPPSP 636
Query: 195 VAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRPPRGPVG-VCRPQVA 253
A L P P L V L A P PS P + P P V+
Sbjct: 637 PASPPL-----SPLATPSPQAPNALAVHLLQAPFSPP-----PSPPVQAPFSPPASPPVS 686
Query: 254 QRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAP 296
SL S PA+ P+ AT P P P
Sbjct: 687 PSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPP 729
Score = 40.4 bits (93), Expect = 0.002
Identities = 57/219 (26%), Positives = 80/219 (36%), Gaps = 33/219 (15%)
Query: 111 PPSSPHA-PTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSPR 169
P S+P A PTR + + S P P E A P + P S P S
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRP-------PASGRGERAPPAKNTSPGPVSSPGRASGT 123
Query: 170 PVRGPHPRRAV------VVAVLFGVQAPRRDVAEGGLRRD--GRRPG-----LAPQRGRG 216
GP ++ + VA +AP+R G RRD G PG +A +
Sbjct: 124 TRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAA 183
Query: 217 GLLLVVLHAATVQRPRLGRGPSRPPRGPV------GVCRPQVAQRQRLARVCVRSLPGNR 270
G + + A RP R P+ PR V P A R+R + P +R
Sbjct: 184 GTEVGLPRPAPSARP---RPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASR 240
Query: 271 RLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSG 309
L++ + P + P + G PS+ PR P G
Sbjct: 241 SLSSSATPLSSPARSG---PSARGTPRAPAHPSQPKPKG 276
Score = 37.7 bits (86), Expect = 0.016
Identities = 59/218 (27%), Positives = 78/218 (35%), Gaps = 22/218 (10%)
Query: 108 PAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPP-GSLPEAAQPPSRPAAQPPSRPAFR 166
P AP SS P ++ P + P S PP +LP A PP + A+ P + P
Sbjct: 500 PQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLE 559
Query: 167 SPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLA--PQRGRGGLLLVVLH 224
+P P P P +A + P + P LA P +G L L
Sbjct: 560 TP-PCPAPCPLQAPPSPL---TTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLA 615
Query: 225 AATVQRPRL---------GRGPSRPPRGPVGVCRPQV--AQRQRLARVCVRSLPGNRRLA 273
Q P P+ PP P+ PQ A L + P A
Sbjct: 616 TPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQA 675
Query: 274 TRSCPAAFPLQGGATLPS----SLPAPRLHLGSLLPSS 307
S PA+ P+ AT PS SL AP L + P+S
Sbjct: 676 PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPAS 713
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 52.8 bits (125), Expect = 5e-07
Identities = 49/158 (31%), Positives = 63/158 (39%), Gaps = 25/158 (15%)
Query: 101 LPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPP 160
LP P + P P + PP Q Q R S P G PP + P A+ P R A P
Sbjct: 504 LPQRLPSPTSAPQQPASQAAPPTQG-QGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQ 562
Query: 161 SRPAFRSPRPVRGPHPRRAVVVAVLFGVQ---APRRDVAEGGLRRDGRRPGLAPQRGRGG 217
+ V GP P +A A G Q P++ G R + G P+ G
Sbjct: 563 A----TRQTSVSGPAPPKA-SGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTG--- 614
Query: 218 LLLVVLHAATVQRPRLGRGPSRPPRGPVGVCRPQVAQR 255
T Q+PR PS P GP G +PQ+AQ+
Sbjct: 615 -------PPTTQQPR----PSGP--GPAGRPKPQLAQK 639
Score = 38.5 bits (88), Expect = 0.009
Identities = 40/139 (28%), Positives = 46/139 (33%), Gaps = 22/139 (15%)
Query: 39 PLAAGGRCRVPSGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAP--- 95
P+A G P R A P P T Q S +PP S AP
Sbjct: 535 PVAGGPGA--PPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKA--------SGAPPGG 584
Query: 96 WRELTLPVSPADPAAPPSSPH----APTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQP 151
+ P P PA P P PP QPRPS P P P + AQ
Sbjct: 585 QQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKP-----QLAQK 639
Query: 152 PSRPAAQPPSRPAFRSPRP 170
PS+ P + A P P
Sbjct: 640 PSQDVPPPATAAAGGPPHP 658
Score = 28.5 bits (62), Expect = 9.7
Identities = 29/116 (25%), Positives = 39/116 (33%), Gaps = 4/116 (3%)
Query: 55 LADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSS 114
++ P P A +QR PP + + P T P + P PS
Sbjct: 569 VSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPR-TGPPTTQQPR--PSG 625
Query: 115 PHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSPRP 170
P RP PQ Q +PS+ P G P S+ + P PRP
Sbjct: 626 PGPAGRPKPQLAQ-KPSQDVPPPATAAAGGPPHPQLNKSQSLTNAFNLPEPAPPRP 680
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 52.8 bits (125), Expect = 5e-07
Identities = 49/158 (31%), Positives = 63/158 (39%), Gaps = 25/158 (15%)
Query: 101 LPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPP 160
LP P + P P + PP Q Q R S P G PP + P A+ P R A P
Sbjct: 504 LPQRLPSPTSAPQQPASQAAPPTQG-QGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQ 562
Query: 161 SRPAFRSPRPVRGPHPRRAVVVAVLFGVQ---APRRDVAEGGLRRDGRRPGLAPQRGRGG 217
+ V GP P +A A G Q P++ G R + G P+ G
Sbjct: 563 A----TRQTSVSGPAPPKA-SGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTG--- 614
Query: 218 LLLVVLHAATVQRPRLGRGPSRPPRGPVGVCRPQVAQR 255
T Q+PR PS P GP G +PQ+AQ+
Sbjct: 615 -------PPTTQQPR----PSGP--GPAGRPKPQLAQK 639
Score = 39.7 bits (91), Expect = 0.004
Identities = 42/148 (28%), Positives = 49/148 (33%), Gaps = 22/148 (14%)
Query: 39 PLAAGGRCRVPSGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAP--- 95
P+A G P R A P P T Q S +PP S AP
Sbjct: 535 PVAGGPGA--PPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKA--------SGAPPGG 584
Query: 96 WRELTLPVSPADPAAPPSSPH----APTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQP 151
+ P P PA P P PP QPRPS P P P + AQ
Sbjct: 585 QQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKP-----QLAQK 639
Query: 152 PSRPAAQPPSRPAFRSPRPVRGPHPRRA 179
PS+ P + A P P P +A
Sbjct: 640 PSQDVPPPATAAAGGPPHPQLKASPAQA 667
Score = 28.9 bits (63), Expect = 7.5
Identities = 28/105 (26%), Positives = 36/105 (34%), Gaps = 4/105 (3%)
Query: 55 LADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSS 114
++ P P A +QR PP + + P T P + P PS
Sbjct: 569 VSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPR-TGPPTTQQPR--PSG 625
Query: 115 PHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQP 159
P RP PQ Q +PS+ P G P S AQP
Sbjct: 626 PGPAGRPKPQLAQ-KPSQDVPPPATAAAGGPPHPQLKASPAQAQP 669
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 52.0 bits (123), Expect = 8e-07
Identities = 53/174 (30%), Positives = 75/174 (43%), Gaps = 18/174 (10%)
Query: 12 KPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIPGNA---RAGVA 68
+PG + ++ G P LA L P A G + P + P PG +AG
Sbjct: 404 QPGPAKPPTQQVGTPKP-LAQQPGLQSPAKAPGPTKTP-----VQQPGPGKIPAQQAGPG 457
Query: 69 RTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQP 128
+T + + PP + P P P A PPS T+PPPQ P
Sbjct: 458 KTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGS-AKPPSQQPGSTKPPPQQPGP 516
Query: 129 -RPSEPTPGSEALP---PGSL-PEAAQP-PSRPAAQPPSRPAFR--SPRPVRGP 174
+PS PGS P PGS P A QP P++P+AQ ++P + S +P++ P
Sbjct: 517 AKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPP 570
Score = 50.4 bits (119), Expect = 2e-06
Identities = 48/212 (22%), Positives = 72/212 (33%), Gaps = 26/212 (12%)
Query: 55 LADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSS 114
+ P PG A E+ + PP + + P + PV P PP+
Sbjct: 306 IQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGT-VKPPVQPPGTTKPPAQ 364
Query: 115 PHAPTRPPPQAV---QPRPSEPTPGSEALPPG------SLPEAAQPPSRPAAQP---PSR 162
P P +PP Q +P +P P + A PPG P A+PP++ P +
Sbjct: 365 PLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQ 424
Query: 163 PAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVV 222
P +SP GP + P + G + PG + G
Sbjct: 425 PGLQSPAKAPGP-------------TKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPS 471
Query: 223 LHAATVQRPRLGRGPSRPPRGPVGVCRPQVAQ 254
+ P GP++PP G +P Q
Sbjct: 472 QLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQ 503
Score = 44.7 bits (104), Expect = 1e-04
Identities = 63/258 (24%), Positives = 93/258 (36%), Gaps = 50/258 (19%)
Query: 58 PIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPW-RELTLPVSPADPAAPPSSPH 116
P G G +T Q DH++ P +R AS A R ++ S P+ PP
Sbjct: 252 PGTGKPIQGPTQTPQTDHAKL--PLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQP 309
Query: 117 APTRPPPQAVQPRPSEPTPGSEALPPGSL--PEAAQPPS-RPAAQPP--SRPAFRSPRPV 171
P +PP Q S+P P P L P A QP + +P QPP ++P + P
Sbjct: 310 TPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPA 369
Query: 172 RGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRP 231
+ P A G + P + + G + + PG+ + P
Sbjct: 370 KPP--------AQQTGSEKPSSE--QPGPKALAQPPGVG------------------KTP 401
Query: 232 RLGRGPSRPPRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPS 291
GP++PP VG +P Q PG + A P P+Q P
Sbjct: 402 AQQPGPAKPPTQQVGTPKPLAQQ------------PGLQSPAKAPGPTKTPVQQPG--PG 447
Query: 292 SLPAPRLHLGSLLPSSSG 309
+PA + G +G
Sbjct: 448 KIPAQQAGPGKTSAQQTG 465
Score = 38.9 bits (89), Expect = 0.007
Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 20/140 (14%)
Query: 51 GLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAA 110
G + LA P GV +T + + PP +++ + + P L P P
Sbjct: 387 GPKALAQP------PGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPG--LQSPAKAPGPTK 438
Query: 111 PPSSPHAPTRPPPQAVQP-----------RPSEPTPGSEALPPGSLPEAAQPPSRP-AAQ 158
P P + P Q P +P PG PP A PP +P +A+
Sbjct: 439 TPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAK 498
Query: 159 PPSRPAFRSPRPVRGPHPRR 178
PPS+ + P + P P +
Sbjct: 499 PPSQQPGSTKPPPQQPGPAK 518
Score = 36.2 bits (82), Expect = 0.047
Identities = 31/115 (26%), Positives = 42/115 (36%), Gaps = 21/115 (18%)
Query: 60 PGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPT 119
P + G A+ + + PP ++ S S P P P PA P T
Sbjct: 469 PPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPG-PAKPSPQQPGST 527
Query: 120 RPP--------PQAVQPRPSEPTP------------GSEALPPGSLPEAAQPPSR 154
+PP P A QP P++P+ G PP P A QPPS+
Sbjct: 528 KPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQ 582
Score = 36.2 bits (82), Expect = 0.047
Identities = 58/231 (25%), Positives = 79/231 (34%), Gaps = 40/231 (17%)
Query: 74 DHSQSSP---PCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQ------ 124
DH SS P + S ++++S P S P+ PS P +P P
Sbjct: 2341 DHPPSSVIALPMKEQLSTTYFTSGETFGQEKPASQL-PSGSPSVSSLPAKPRPFFRSSSL 2399
Query: 125 --AVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSPRPVRGPHPRRAVVV 182
+ QP P P P PP PP P PP P SP+P P++ + V
Sbjct: 2400 DISAQPPPPPPPP-----PP-------PPPPPPPPPPPPLPPPTSPKPT--ILPKKKLTV 2445
Query: 183 AVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRPPR 242
A P D A R G L V T P + PS P
Sbjct: 2446 ASPVTTATPLFDAVT-------TLETTAVLRSNG---LPVTRICTTAPPPVPPKPSSIPS 2495
Query: 243 GPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSL 293
G V RP+ ++ + + LP T+ P G +L SS+
Sbjct: 2496 GLVFTHRPEPSKPPIAPKPVIPQLP----TTTQKPTDIHPKPTGLSLTSSM 2542
Score = 31.6 bits (70), Expect = 1.2
Identities = 35/146 (23%), Positives = 45/146 (30%), Gaps = 19/146 (13%)
Query: 103 VSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSR 162
V P P P P A +P P PPG P A Q P P +
Sbjct: 846 VDPVQKKEEPKKAQTKMSPKPDA------KPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQ 899
Query: 163 PAFR---------SPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQR 213
R + P P + V LFG A A + G +PG Q
Sbjct: 900 EQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTAG-QPGPHSQS 958
Query: 214 GRGGLLLVVLHAATVQRPRLGRGPSR 239
G G + A +P +GP +
Sbjct: 959 GPGA---PMKQAPAPSQPPTSQGPPK 981
Score = 30.8 bits (68), Expect = 2.0
Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 16/107 (14%)
Query: 75 HSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPT 134
HSQS P AP ++ P P PP S P +++ +
Sbjct: 955 HSQSGP------------GAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKA 1002
Query: 135 PGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSPRPVRGPHPRRAVV 181
P +E L P+A Q P+ + +P P++AV+
Sbjct: 1003 PAAEKLE----PKAEQAPTVKRTETEKKPPPIKDSKSLTAEPQKAVL 1045
Score = 29.6 bits (65), Expect = 4.4
Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 16/96 (16%)
Query: 93 SAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPP 152
S+P + T P A P S P +PPP QP L +A QPP
Sbjct: 675 SSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQP----------TLHGSPSAKAKQPP 724
Query: 153 SRPA------AQPPSRPAFRSPRPVRGPHPRRAVVV 182
+ + PS P+ + PV P++ +V
Sbjct: 725 EADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMV 760
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 52.0 bits (123), Expect = 8e-07
Identities = 53/174 (30%), Positives = 75/174 (43%), Gaps = 18/174 (10%)
Query: 12 KPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIPGNA---RAGVA 68
+PG + ++ G P LA L P A G + P + P PG +AG
Sbjct: 404 QPGPAKPPTQQVGTPKP-LAQQPGLQSPAKAPGPTKTP-----VQQPGPGKIPAQQAGPG 457
Query: 69 RTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQP 128
+T + + PP + P P P A PPS T+PPPQ P
Sbjct: 458 KTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGS-AKPPSQQPGSTKPPPQQPGP 516
Query: 129 -RPSEPTPGSEALP---PGSL-PEAAQP-PSRPAAQPPSRPAFR--SPRPVRGP 174
+PS PGS P PGS P A QP P++P+AQ ++P + S +P++ P
Sbjct: 517 AKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPP 570
Score = 50.4 bits (119), Expect = 2e-06
Identities = 48/212 (22%), Positives = 72/212 (33%), Gaps = 26/212 (12%)
Query: 55 LADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSS 114
+ P PG A E+ + PP + + P + PV P PP+
Sbjct: 306 IQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGT-VKPPVQPPGTTKPPAQ 364
Query: 115 PHAPTRPPPQAV---QPRPSEPTPGSEALPPG------SLPEAAQPPSRPAAQP---PSR 162
P P +PP Q +P +P P + A PPG P A+PP++ P +
Sbjct: 365 PLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQ 424
Query: 163 PAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVV 222
P +SP GP + P + G + PG + G
Sbjct: 425 PGLQSPAKAPGP-------------TKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPS 471
Query: 223 LHAATVQRPRLGRGPSRPPRGPVGVCRPQVAQ 254
+ P GP++PP G +P Q
Sbjct: 472 QLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQ 503
Score = 44.7 bits (104), Expect = 1e-04
Identities = 63/258 (24%), Positives = 93/258 (36%), Gaps = 50/258 (19%)
Query: 58 PIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPW-RELTLPVSPADPAAPPSSPH 116
P G G +T Q DH++ P +R AS A R ++ S P+ PP
Sbjct: 252 PGTGKPIQGPTQTPQTDHAKL--PLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQP 309
Query: 117 APTRPPPQAVQPRPSEPTPGSEALPPGSL--PEAAQPPS-RPAAQPP--SRPAFRSPRPV 171
P +PP Q S+P P P L P A QP + +P QPP ++P + P
Sbjct: 310 TPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPA 369
Query: 172 RGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRP 231
+ P A G + P + + G + + PG+ + P
Sbjct: 370 KPP--------AQQTGSEKPSSE--QPGPKALAQPPGVG------------------KTP 401
Query: 232 RLGRGPSRPPRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPS 291
GP++PP VG +P Q PG + A P P+Q P
Sbjct: 402 AQQPGPAKPPTQQVGTPKPLAQQ------------PGLQSPAKAPGPTKTPVQQPG--PG 447
Query: 292 SLPAPRLHLGSLLPSSSG 309
+PA + G +G
Sbjct: 448 KIPAQQAGPGKTSAQQTG 465
Score = 38.9 bits (89), Expect = 0.007
Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 20/140 (14%)
Query: 51 GLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAA 110
G + LA P GV +T + + PP +++ + + P L P P
Sbjct: 387 GPKALAQP------PGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPG--LQSPAKAPGPTK 438
Query: 111 PPSSPHAPTRPPPQAVQP-----------RPSEPTPGSEALPPGSLPEAAQPPSRP-AAQ 158
P P + P Q P +P PG PP A PP +P +A+
Sbjct: 439 TPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAK 498
Query: 159 PPSRPAFRSPRPVRGPHPRR 178
PPS+ + P + P P +
Sbjct: 499 PPSQQPGSTKPPPQQPGPAK 518
Score = 36.2 bits (82), Expect = 0.047
Identities = 31/115 (26%), Positives = 42/115 (36%), Gaps = 21/115 (18%)
Query: 60 PGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPT 119
P + G A+ + + PP ++ S S P P P PA P T
Sbjct: 469 PPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPG-PAKPSPQQPGST 527
Query: 120 RPP--------PQAVQPRPSEPTP------------GSEALPPGSLPEAAQPPSR 154
+PP P A QP P++P+ G PP P A QPPS+
Sbjct: 528 KPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQ 582
Score = 36.2 bits (82), Expect = 0.047
Identities = 58/231 (25%), Positives = 79/231 (34%), Gaps = 40/231 (17%)
Query: 74 DHSQSSP---PCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQ------ 124
DH SS P + S ++++S P S P+ PS P +P P
Sbjct: 2341 DHPPSSVIALPMKEQLSTTYFTSGETFGQEKPASQL-PSGSPSVSSLPAKPRPFFRSSSL 2399
Query: 125 --AVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSPRPVRGPHPRRAVVV 182
+ QP P P P PP PP P PP P SP+P P++ + V
Sbjct: 2400 DISAQPPPPPPPP-----PP-------PPPPPPPPPPPPLPPPTSPKPT--ILPKKKLTV 2445
Query: 183 AVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRPPR 242
A P D A R G L V T P + PS P
Sbjct: 2446 ASPVTTATPLFDAVT-------TLETTAVLRSNG---LPVTRICTTAPPPVPPKPSSIPS 2495
Query: 243 GPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSL 293
G V RP+ ++ + + LP T+ P G +L SS+
Sbjct: 2496 GLVFTHRPEPSKPPIAPKPVIPQLP----TTTQKPTDIHPKPTGLSLTSSM 2542
Score = 31.6 bits (70), Expect = 1.2
Identities = 35/146 (23%), Positives = 45/146 (30%), Gaps = 19/146 (13%)
Query: 103 VSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSR 162
V P P P P A +P P PPG P A Q P P +
Sbjct: 846 VDPVQKKEEPKKAQTKMSPKPDA------KPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQ 899
Query: 163 PAFR---------SPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQR 213
R + P P + V LFG A A + G +PG Q
Sbjct: 900 EQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTAG-QPGPHSQS 958
Query: 214 GRGGLLLVVLHAATVQRPRLGRGPSR 239
G G + A +P +GP +
Sbjct: 959 GPGA---PMKQAPAPSQPPTSQGPPK 981
Score = 30.8 bits (68), Expect = 2.0
Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 16/107 (14%)
Query: 75 HSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPT 134
HSQS P AP ++ P P PP S P +++ +
Sbjct: 955 HSQSGP------------GAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKA 1002
Query: 135 PGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSPRPVRGPHPRRAVV 181
P +E L P+A Q P+ + +P P++AV+
Sbjct: 1003 PAAEKLE----PKAEQAPTVKRTETEKKPPPIKDSKSLTAEPQKAVL 1045
Score = 29.6 bits (65), Expect = 4.4
Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 16/96 (16%)
Query: 93 SAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPP 152
S+P + T P A P S P +PPP QP L +A QPP
Sbjct: 675 SSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQP----------TLHGSPSAKAKQPP 724
Query: 153 SRPA------AQPPSRPAFRSPRPVRGPHPRRAVVV 182
+ + PS P+ + PV P++ +V
Sbjct: 725 EADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMV 760
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 52.0 bits (123), Expect = 8e-07
Identities = 89/344 (25%), Positives = 110/344 (31%), Gaps = 67/344 (19%)
Query: 38 LPLAAGGRCRVPSGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWR 97
LP +A P GL + A P A T Q + +PP S P
Sbjct: 588 LPPSAVAMLNTPDGLVQPATPAAATGEAAPVLTVQP--APQAPPA---------VSTP-- 634
Query: 98 ELTLPVSPADPAA--PPSSPHAPTRPPPQAVQPRPSEPTPGSE-----ALPPGSLP---- 146
LP+ P A PP +P PPQA P+PS S PP + P
Sbjct: 635 ---LPLGLQQPQAQQPPQAPTPQAAAPPQATTPQPSPGLASSPEKIVLGQPPSATPTAIL 691
Query: 147 -----------EAAQPP---SRPAAQPPSRPAFRSPRPVRGPHPRRAVVVAVLFGVQAPR 192
E +Q P P P+ +P P + P P V G QAP
Sbjct: 692 TQDSLQMFLPQERSQQPLSAEGPHLSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPD 751
Query: 193 RDVAEGGLRRDGRRPGLAPQRGRGGLLLVVL-HAAT------VQRPRLGRGPSRPPRGPV 245
+ + P AP +G G L H A + P R PSRPP P
Sbjct: 752 SQASPAPA---PQIPAAAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQ 808
Query: 246 GVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQG--GATLPSSLPAPRL---HL 300
V RP P A + P F +Q G P+S PAP
Sbjct: 809 SVSRPPSEPPLH---------PCPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQ 859
Query: 301 GSLLPSSSGGARLGDAAGTTHFQPAHLSHAAAPASLTDHSFARP 344
L P S G H P+ S A A +S T P
Sbjct: 860 PPLRPQSQPPE--GPLPPAPHLPPSSTSSAVASSSETSSRLPAP 901
Score = 40.8 bits (94), Expect = 0.002
Identities = 63/249 (25%), Positives = 81/249 (32%), Gaps = 57/249 (22%)
Query: 57 DPIPGNARA-GVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSP 115
DP P A G Q SQ+SP + AP P+ P++ PS P
Sbjct: 732 DPAPATPVAKGAGLGPQAPDSQASP-----------APAPQIPAAAPLKGPGPSSSPSLP 780
Query: 116 H-APTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSPRPVRGP 174
H AP P P P+ P + PP ++PPS P P P P P
Sbjct: 781 HQAPLGDSPHLPSPHPTRPP----SRPPSRPQSVSRPPSEPPLHP-------CPPPQAPP 829
Query: 175 HPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLG 234
V+ GV P + A +P L PQ
Sbjct: 830 TLPGIFVIQNQLGVPPPASNPAP--TAPGPPQPPLRPQ---------------------- 865
Query: 235 RGPSRPPRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQ---GGATLPS 291
S+PP GP+ P + + V S +R A P+ F LQ S
Sbjct: 866 ---SQPPEGPLPPA-PHLPPSSTSSAVASSSETSSRLPA--PTPSDFQLQFPPSQGPHKS 919
Query: 292 SLPAPRLHL 300
P P LHL
Sbjct: 920 PTPPPTLHL 928
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 52.0 bits (123), Expect = 8e-07
Identities = 38/91 (41%), Positives = 41/91 (45%), Gaps = 10/91 (10%)
Query: 108 PAAPPSSPHAPT---RPPP---QAVQPRPSEPTPGS-EALPPGSLPEAAQPPSRPAAQPP 160
P APPS P P RPPP + PRP P P S PPG LP PP+ PA P
Sbjct: 217 PPAPPSLPAGPPGVKRPPPPLMNGLPPRP--PLPESLPPPPPGGLPLPPMPPTGPAPSGP 274
Query: 161 SRPAFRSPRPVRGPHPRRAVVVAVLFGVQAP 191
P + P P G HP VV GV P
Sbjct: 275 PGPP-QLPPPAPGVHPPAPVVHPPASGVHPP 304
Score = 39.7 bits (91), Expect = 0.004
Identities = 32/92 (34%), Positives = 37/92 (40%), Gaps = 12/92 (13%)
Query: 101 LPVSPADPAAP-PSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQP 159
LP+ P P P PS P P + PP P P P PP S PP+ P P
Sbjct: 259 LPLPPMPPTGPAPSGPPGPPQLPP----PAPGVHPPAPVVHPPAS---GVHPPA-PGVHP 310
Query: 160 PSRPAFRSPRPVRGPHPRRAVVVAVLFGVQAP 191
P+ P P P G HP + V GV P
Sbjct: 311 PA-PGVHPPAP--GVHPPTSGVHPPAPGVHPP 339
Score = 38.9 bits (89), Expect = 0.007
Identities = 31/94 (32%), Positives = 33/94 (35%), Gaps = 8/94 (8%)
Query: 102 PVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPS 161
P P + PP P PP P PS P PG LPP P P P PP+
Sbjct: 243 PRPPLPESLPPPPPGGLPLPPMPPTGPAPSGP-PGPPQLPP---PAPGVHPPAPVVHPPA 298
Query: 162 R----PAFRSPRPVRGPHPRRAVVVAVLFGVQAP 191
PA P G HP V GV P
Sbjct: 299 SGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPP 332
Score = 38.9 bits (89), Expect = 0.007
Identities = 28/78 (35%), Positives = 31/78 (39%), Gaps = 15/78 (19%)
Query: 108 PAAPPSSPHAP-TRPPPQAVQPRPSEPTPGSEALPPGSLPEAA----QPPSRPAAQP--- 159
PAAP P AP PP + P+ PG PPG P A QPP + P
Sbjct: 381 PAAPAVHPQAPGVHPPAPGMHPQ----APGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVH 436
Query: 160 ---PSRPAFRSPRPVRGP 174
P P R P P GP
Sbjct: 437 PPTPMPPMLRPPLPSEGP 454
Score = 35.0 bits (79), Expect = 0.10
Identities = 31/98 (31%), Positives = 38/98 (38%), Gaps = 8/98 (8%)
Query: 102 PVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPS 161
P+ P PP P + PPP + P PT + + PPG P+ PP P PP+
Sbjct: 236 PLMNGLPPRPP-LPESLPPPPPGGLPLPPMPPTGPAPSGPPGP-PQL--PPPAPGVHPPA 291
Query: 162 ----RPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDV 195
PA P G HP V GV P V
Sbjct: 292 PVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGV 329
Score = 32.0 bits (71), Expect = 0.88
Identities = 34/102 (33%), Positives = 36/102 (35%), Gaps = 17/102 (16%)
Query: 102 PVSPADPAAPPSSPHAP-TRPPPQAVQPRPS---EPTPGSEALPPGSLPEA--AQPPS-- 153
P P P P P AP PP V P S P PG PG P A PP+
Sbjct: 271 PSGPPGP--PQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSG 328
Query: 154 ----RPAAQPPSRPAFRSPRPVRGPHPRRAVVVAVLFGVQAP 191
P PP+ P P P G HP V GV P
Sbjct: 329 VHPPAPGVHPPA-PGVHPPAP--GVHPPAPGVHPPAPGVHPP 367
Score = 32.0 bits (71), Expect = 0.88
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 103 VSPADPAAPPSSP--HAPTRPPPQAVQPRPSEPTPGSEALPP 142
V P P PS+P H PT PP P PSE PG+ PP
Sbjct: 421 VHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSE-GPGNIPPPP 461
Score = 31.6 bits (70), Expect = 1.2
Identities = 26/87 (29%), Positives = 27/87 (31%), Gaps = 8/87 (9%)
Query: 105 PADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPA 164
PA PP+S P P P P PG PG P A P PP
Sbjct: 318 PAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPA------PGVHPPPSAG 371
Query: 165 FRSPRPVRGPHPRRAVVVAVLFGVQAP 191
P G HP V GV P
Sbjct: 372 VHPQAP--GVHPAAPAVHPQAPGVHPP 396
Score = 29.3 bits (64), Expect = 5.7
Identities = 23/73 (31%), Positives = 26/73 (35%), Gaps = 9/73 (12%)
Query: 103 VSPADPAAPPSSPHAPTRPP---PQA--VQPRPSEPTPGSEALPPGSLPEAAQPPSRPAA 157
V P P P +P +PP P A V P+P PG PG P PP
Sbjct: 393 VHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQP----PGVHPSNPGVHPPTPMPPMLRPP 448
Query: 158 QPPSRPAFRSPRP 170
P P P P
Sbjct: 449 LPSEGPGNIPPPP 461
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 51.6 bits (122), Expect = 1e-06
Identities = 31/81 (38%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 96 WRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRP 155
W + P +PA + P +P APT P P VQP + P PG A P G P++A S P
Sbjct: 572 WTRMARPAAPALTSVPAPAP-APT-PTPTPVQP--TSPPPGPVAQPTGPQPQSAGSTSGP 627
Query: 156 AAQPPSRPAFRSPRPVRGPHP 176
QP P +P P P P
Sbjct: 628 VPQPACPPPGPAPHPTGPPGP 648
Score = 38.9 bits (89), Expect = 0.007
Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 94 APWRELTLPVSPADPAAPPSSPHA-PTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPP 152
AP T +P P +PP P A PT P PQ+ S P P PPG P PP
Sbjct: 588 APAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSA-GSTSGPVPQPACPPPGPAPHPTGPP 646
Query: 153 SR-PAAQPP 160
P PP
Sbjct: 647 GPIPVPAPP 655
Score = 32.3 bits (72), Expect = 0.67
Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 14/116 (12%)
Query: 98 ELTLPVSPADPAAPPSSPHAPTR---PPPQAVQPRPSEPTPGSEALPP---GSLPEAAQP 151
E+ P +P+ A S P AP P P + P P SE PP G++ + +
Sbjct: 418 EMPSPWAPSGDCAMESPPPAPPPCPGPAPDTIDLTLQPPPPVSEPAPPKKDGAISDNTKA 477
Query: 152 PSRPAAQPPSRPAFRS--PRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGR 205
+ A R R P+ P PR+ V Q +R+ E RR R
Sbjct: 478 ALKAALLKSLRSRLRDGPSAPLEAPEPRKPVT------AQERQREREEKRRRRQER 527
Score = 28.9 bits (63), Expect = 7.5
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 10/63 (15%)
Query: 108 PAAPPSSPH-APTRPPPQAVQPRPSEPTPGSEAL------PPGSLPEAAQP---PSRPAA 157
PA PP P PT PP P P + + L PP LP ++ P P P
Sbjct: 631 PACPPPGPAPHPTGPPGPIPVPAPPQIATSTSLLAAQSLVPPPGLPGSSTPGVLPYFPPG 690
Query: 158 QPP 160
PP
Sbjct: 691 LPP 693
>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 51.6 bits (122), Expect = 1e-06
Identities = 31/81 (38%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 96 WRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRP 155
W + P +PA + P +P APT P P VQP + P PG A P G P++A S P
Sbjct: 572 WTRMARPAAPALTSVPAPAP-APT-PTPTPVQP--TSPPPGPVAQPTGPQPQSAGSTSGP 627
Query: 156 AAQPPSRPAFRSPRPVRGPHP 176
QP P +P P P P
Sbjct: 628 VPQPACPPPGPAPHPTGPPGP 648
Score = 38.9 bits (89), Expect = 0.007
Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 94 APWRELTLPVSPADPAAPPSSPHA-PTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPP 152
AP T +P P +PP P A PT P PQ+ S P P PPG P PP
Sbjct: 588 APAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSA-GSTSGPVPQPACPPPGPAPHPTGPP 646
Query: 153 SR-PAAQPP 160
P PP
Sbjct: 647 GPIPVPAPP 655
Score = 32.3 bits (72), Expect = 0.67
Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 14/116 (12%)
Query: 98 ELTLPVSPADPAAPPSSPHAPTR---PPPQAVQPRPSEPTPGSEALPP---GSLPEAAQP 151
E+ P +P+ A S P AP P P + P P SE PP G++ + +
Sbjct: 418 EMPSPWAPSGDCAMESPPPAPPPCPGPAPDTIDLTLQPPPPVSEPAPPKKDGAISDNTKA 477
Query: 152 PSRPAAQPPSRPAFRS--PRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGR 205
+ A R R P+ P PR+ V Q +R+ E RR R
Sbjct: 478 ALKAALLKSLRSRLRDGPSAPLEAPEPRKPVT------AQERQREREEKRRRRQER 527
Score = 28.9 bits (63), Expect = 7.5
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 10/63 (15%)
Query: 108 PAAPPSSPH-APTRPPPQAVQPRPSEPTPGSEAL------PPGSLPEAAQP---PSRPAA 157
PA PP P PT PP P P + + L PP LP ++ P P P
Sbjct: 631 PACPPPGPAPHPTGPPGPIPVPAPPQIATSTSLLAAQSLVPPPGLPGSSTPGVLPYFPPG 690
Query: 158 QPP 160
PP
Sbjct: 691 LPP 693
>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 51.6 bits (122), Expect = 1e-06
Identities = 31/81 (38%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 96 WRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRP 155
W + P +PA + P +P APT P P VQP + P PG A P G P++A S P
Sbjct: 572 WTRMARPAAPALTSVPAPAP-APT-PTPTPVQP--TSPPPGPVAQPTGPQPQSAGSTSGP 627
Query: 156 AAQPPSRPAFRSPRPVRGPHP 176
QP P +P P P P
Sbjct: 628 VPQPACPPPGPAPHPTGPPGP 648
Score = 38.9 bits (89), Expect = 0.007
Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 94 APWRELTLPVSPADPAAPPSSPHA-PTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPP 152
AP T +P P +PP P A PT P PQ+ S P P PPG P PP
Sbjct: 588 APAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSA-GSTSGPVPQPACPPPGPAPHPTGPP 646
Query: 153 SR-PAAQPP 160
P PP
Sbjct: 647 GPIPVPAPP 655
Score = 32.3 bits (72), Expect = 0.67
Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 14/116 (12%)
Query: 98 ELTLPVSPADPAAPPSSPHAPTR---PPPQAVQPRPSEPTPGSEALPP---GSLPEAAQP 151
E+ P +P+ A S P AP P P + P P SE PP G++ + +
Sbjct: 418 EMPSPWAPSGDCAMESPPPAPPPCPGPAPDTIDLTLQPPPPVSEPAPPKKDGAISDNTKA 477
Query: 152 PSRPAAQPPSRPAFRS--PRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGR 205
+ A R R P+ P PR+ V Q +R+ E RR R
Sbjct: 478 ALKAALLKSLRSRLRDGPSAPLEAPEPRKPVT------AQERQREREEKRRRRQER 527
Score = 28.9 bits (63), Expect = 7.5
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 10/63 (15%)
Query: 108 PAAPPSSPH-APTRPPPQAVQPRPSEPTPGSEAL------PPGSLPEAAQP---PSRPAA 157
PA PP P PT PP P P + + L PP LP ++ P P P
Sbjct: 631 PACPPPGPAPHPTGPPGPIPVPAPPQIATSTSLLAAQSLVPPPGLPGSSTPGVLPYFPPG 690
Query: 158 QPP 160
PP
Sbjct: 691 LPP 693
>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
sapiens]
Length = 677
Score = 51.6 bits (122), Expect = 1e-06
Identities = 31/81 (38%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 96 WRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRP 155
W + P +PA + P +P APT P P VQP + P PG A P G P++A S P
Sbjct: 433 WTRMARPAAPALTSVPAPAP-APT-PTPTPVQP--TSPPPGPVAQPTGPQPQSAGSTSGP 488
Query: 156 AAQPPSRPAFRSPRPVRGPHP 176
QP P +P P P P
Sbjct: 489 VPQPACPPPGPAPHPTGPPGP 509
Score = 38.9 bits (89), Expect = 0.007
Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 94 APWRELTLPVSPADPAAPPSSPHA-PTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPP 152
AP T +P P +PP P A PT P PQ+ S P P PPG P PP
Sbjct: 449 APAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSA-GSTSGPVPQPACPPPGPAPHPTGPP 507
Query: 153 SR-PAAQPP 160
P PP
Sbjct: 508 GPIPVPAPP 516
Score = 32.3 bits (72), Expect = 0.67
Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 14/116 (12%)
Query: 98 ELTLPVSPADPAAPPSSPHAPTR---PPPQAVQPRPSEPTPGSEALPP---GSLPEAAQP 151
E+ P +P+ A S P AP P P + P P SE PP G++ + +
Sbjct: 279 EMPSPWAPSGDCAMESPPPAPPPCPGPAPDTIDLTLQPPPPVSEPAPPKKDGAISDNTKA 338
Query: 152 PSRPAAQPPSRPAFRS--PRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGR 205
+ A R R P+ P PR+ V Q +R+ E RR R
Sbjct: 339 ALKAALLKSLRSRLRDGPSAPLEAPEPRKPVT------AQERQREREEKRRRRQER 388
Score = 28.9 bits (63), Expect = 7.5
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 10/63 (15%)
Query: 108 PAAPPSSPH-APTRPPPQAVQPRPSEPTPGSEAL------PPGSLPEAAQP---PSRPAA 157
PA PP P PT PP P P + + L PP LP ++ P P P
Sbjct: 492 PACPPPGPAPHPTGPPGPIPVPAPPQIATSTSLLAAQSLVPPPGLPGSSTPGVLPYFPPG 551
Query: 158 QPP 160
PP
Sbjct: 552 LPP 554
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 51.2 bits (121), Expect = 1e-06
Identities = 25/70 (35%), Positives = 30/70 (42%)
Query: 102 PVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPS 161
P PA P+ PP P+ PPP + P P P PP + A PP PAA P
Sbjct: 1477 PPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPE 1536
Query: 162 RPAFRSPRPV 171
P RP+
Sbjct: 1537 DPELPDTRPL 1546
Score = 47.0 bits (110), Expect = 3e-05
Identities = 28/80 (35%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Query: 102 PVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGS-EALPPGSLPEAAQPP---SRPAA 157
P P PP P PP V P PS P P PP ++P PP + P A
Sbjct: 1465 PTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLA 1524
Query: 158 QPPSRPAFRSPRPVRGPHPR 177
PP PA SP P R
Sbjct: 1525 APPEEPAAPSPEDPELPDTR 1544
Score = 45.8 bits (107), Expect = 6e-05
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 108 PAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRS 167
P PP +P +PPP P+P+ P+P PP P + PP P PP PA S
Sbjct: 1458 PPTPPPAPTPQPQPPPPPPPPQPALPSP-----PPLVAPTPSSPPP-PPLPPPPPPAMPS 1511
Query: 168 PRPVRGPHPRRAVVVA 183
P P P P A +A
Sbjct: 1512 PPP---PPPPAAAPLA 1524
Score = 45.4 bits (106), Expect = 8e-05
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Query: 95 PWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTP--GSEALPPGSLPEAAQP- 151
PW +PV + A P S + PPP+A P P TP + PP PE A P
Sbjct: 1666 PWHRPPVPVRRSGQAKNPVSAGGSSAPPPKAPAPPPKPETPEKTTSEKPPEQTPETAMPE 1725
Query: 152 ---PSRPAAQPPSRPAFRSPRPVRGPHPRR 178
P +P+ P + RG P R
Sbjct: 1726 PPAPEKPSLLRPVEKEKEKEKVTRGERPLR 1755
Score = 43.1 bits (100), Expect = 4e-04
Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 14/85 (16%)
Query: 102 PVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAA---- 157
P + P PP +P A PP P P P+ S P L E PP+ P A
Sbjct: 1413 PKDTSTPDGPPLAPAAAVPGPP----PLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQ 1468
Query: 158 ------QPPSRPAFRSPRPVRGPHP 176
PP +PA SP P+ P P
Sbjct: 1469 PQPPPPPPPPQPALPSPPPLVAPTP 1493
Score = 38.5 bits (88), Expect = 0.009
Identities = 66/255 (25%), Positives = 89/255 (34%), Gaps = 36/255 (14%)
Query: 76 SQSSPPCRRLASYSFWSSAPWRELTLPVSPA---DPAAPPS----SPHAPTRPPPQAVQP 128
S + P L++Y +S R +P S + P +PP+ SPH P
Sbjct: 139 SSTFPSSSALSAYQHPASFGSRPFPVPSSLSLQDPPFSPPANGLLSPHDVLHLKPSQAPT 198
Query: 129 RPS----EPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSPRPVRGPHPRRAVVVAV 184
PS E G L P L A PP RP P P PR + P + ++A
Sbjct: 199 VPSSLGFERLAGGGVLGPAGLGPAQTPPYRPGPPDPPPP----PRHL----PTQFNLLAS 250
Query: 185 LFGVQAPRRDVAEGGLRRDGRRPG-LAPQRGRGGLLLVVLHAATVQRPRLGRGPSRPPRG 243
A + G PG P+R V+ H QRP + P PP
Sbjct: 251 SSAAAAAAEQSSPQLYNFSGAAPGPPPPERALPRQDTVIKH---YQRPASAQPPPPPP-- 305
Query: 244 PVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHLGSL 303
P A + L+ C S P A +C PL GG P + +
Sbjct: 306 ------PAHALQHYLS--CGGSYPSMGHRANLACS---PLGGGEPSPGAGEPSKAGPSGA 354
Query: 304 LPSSSGGARLGDAAG 318
+SG A +AAG
Sbjct: 355 TAGASGRATGPEAAG 369
Score = 34.3 bits (77), Expect = 0.18
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 8/63 (12%)
Query: 109 AAPPSSPHAPTRPPPQ--------AVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPP 160
A P P PPPQ A P PS G L P + A QPP P PP
Sbjct: 785 AGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVHLLEPATRDGAPQPPPPPPPPPP 844
Query: 161 SRP 163
P
Sbjct: 845 PMP 847
Score = 31.6 bits (70), Expect = 1.2
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 11/67 (16%)
Query: 107 DPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPP---SRP 163
DP PP P P +Q P + P PP P PP PA++P + P
Sbjct: 1011 DPNKPPELPSTVNAEPLGLIQSGPHQAAP-----PP---PPPPPPPPAPASEPKGGLTSP 1062
Query: 164 AFRSPRP 170
F S +P
Sbjct: 1063 IFCSTKP 1069
Score = 30.8 bits (68), Expect = 2.0
Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 26/103 (25%)
Query: 110 APPSSPHAPTRPPPQAVQ---------PRPSEPTP---GSEAL-PPGSLPE---AAQP-- 151
AP P P PPP +Q P+ P+P E+L PPG++ E A +P
Sbjct: 832 APQPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSPRLRPEESLDPPGAMQELLGALEPLP 891
Query: 152 --PSRPAAQPPSRP------AFRSPRPVRGPHPRRAVVVAVLF 186
P PP+ A+RSP P PR + ++ F
Sbjct: 892 PAPGDTGVGPPNSEGKDPAGAYRSPSPQGTKAPRFVPLTSICF 934
Score = 28.9 bits (63), Expect = 7.5
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 99 LTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQ 150
LT P+SP + PPS P +P P A P P G+ L G EAA+
Sbjct: 1303 LTPPLSPPK-SVPPSVPARGLQPQPPATPAVPHPPPSGAFGL--GGALEAAE 1351
Score = 28.5 bits (62), Expect = 9.7
Identities = 69/245 (28%), Positives = 82/245 (33%), Gaps = 50/245 (20%)
Query: 114 SPHAPTRPPPQAVQPR---PSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSPRP 170
SP P P A +P PS T G+ G PEAA RP +SP
Sbjct: 332 SPLGGGEPSPGAGEPSKAGPSGATAGASGRATG--PEAAGGGGAGGGGGGYRPIIQSPGY 389
Query: 171 VRG-------------PHPRRAVVVAVLFGVQAPRRDVAEG------GLRRDGRRPG--- 208
G P P R+ + P A G G PG
Sbjct: 390 KTGKGGYGAAAGGATRPPPPRSTATPKCQSLGGPAAAYATGKASGAGGAGGQAYSPGQPQ 449
Query: 209 --LAPQ---RGRGGLLLVVLHAATVQRPRLGRGPSRPPRGP----VGVCR---PQVAQRQ 256
L PQ +G GG L A P GP +PP GP + C+ P Q Q
Sbjct: 450 GLLGPQAYGQGFGGGQAQDLSKA----PSYSGGPPQPPSGPPPPGLATCQSYSPDQLQGQ 505
Query: 257 RLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSGGARLGDA 316
L V PG ++ P A P +T S PA H G PSS GG G
Sbjct: 506 -LYGVQGEPYPG-PAAHSQGLPTASPSLSYSTGHS--PALSGHGGGWGPSSLGG---GGE 558
Query: 317 AGTTH 321
A +H
Sbjct: 559 ASPSH 563
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 49.3 bits (116), Expect = 5e-06
Identities = 77/259 (29%), Positives = 95/259 (36%), Gaps = 52/259 (20%)
Query: 57 DPIPGNARAGVARTEQRDHSQSS---PPCRRLA--SYSFWSSAPWRELTLPVSPADPAAP 111
DP + R + R S + PP + A + S WS+ +SP P P
Sbjct: 618 DPEKPGTPIVLRRAQPRARSSNDARRPPAPQPAPRTLSHWSAL--------LSPPVPPRP 669
Query: 112 PSS--PHAPTRPPPQAVQPRPSEPTPGSEALP-----PGSLPEAAQ--------PPSRPA 156
PSS P AP P + PRP+ P P P +P A Q PP+
Sbjct: 670 PSSGPPPAPPLSPALSGLPRPASPYGSLRRHPPPWAAPAHVPPAPQASWWAFVEPPAVSP 729
Query: 157 AQPPSRPAFRSPRP-VRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQ--- 212
PP AF PRP RG R A A F +PR RR P +PQ
Sbjct: 730 EVPPDLLAFPGPRPSFRGSRRRGA---AFGFPGASPRAS------RRRAWSPLASPQPSL 780
Query: 213 RGRGGLLLVVLHAATVQRPRLGRGPSRPPRGPVGVCRPQVAQRQRLARVCVRSLPGNRRL 272
R GL A + L GP +PP P A+R R ++ P RR
Sbjct: 781 RSSPGLGYCSPLAPPSPQLSLRTGPFQPPFLP-------PARRPR----SLQESPAPRRA 829
Query: 273 ATRSCPAAFPLQGGATLPS 291
A R P PL G PS
Sbjct: 830 AGRLGPPGSPLPGSPRPPS 848
Score = 35.0 bits (79), Expect = 0.10
Identities = 75/287 (26%), Positives = 98/287 (34%), Gaps = 48/287 (16%)
Query: 58 PIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAP------WRELTLPVSPADPAAP 111
P+P A + +AR ++ S+ P R S + P ++ ++ DP P
Sbjct: 564 PVPRPATS-LARFLKKTLSEKKPIARLRGSQKARAGGPAVREAAYKRFGYKLAGMDPEKP 622
Query: 112 PSSPHAPTRPPPQAVQP----RPSEPTPGSEAL--------------PPGSLPEAAQPPS 153
+P R P+A RP P P L PP S P A PP
Sbjct: 623 -GTPIVLRRAQPRARSSNDARRPPAPQPAPRTLSHWSALLSPPVPPRPPSSGPPPA-PPL 680
Query: 154 RPAAQPPSRPAF------RSPRPVRGP-HPRRAVVVAVLFGVQAP--RRDVAEGGLRRDG 204
PA RPA R P P P H A + V+ P +V L G
Sbjct: 681 SPALSGLPRPASPYGSLRRHPPPWAAPAHVPPAPQASWWAFVEPPAVSPEVPPDLLAFPG 740
Query: 205 RRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRPPRGPVGVCRPQVAQRQRLARVCVR 264
RP R RG PR R R P+ +P + L C
Sbjct: 741 PRPSFRGSRRRGAAF-----GFPGASPRASR---RRAWSPLASPQPSLRSSPGLG-YCSP 791
Query: 265 SLPGNRRLATRSCPAAFPLQGGATLPSSL---PAPRLHLGSLLPSSS 308
P + +L+ R+ P P A P SL PAPR G L P S
Sbjct: 792 LAPPSPQLSLRTGPFQPPFLPPARRPRSLQESPAPRRAAGRLGPPGS 838
Score = 34.7 bits (78), Expect = 0.14
Identities = 33/115 (28%), Positives = 42/115 (36%), Gaps = 14/115 (12%)
Query: 93 SAPWRELTLPVSPADP-----AAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGS-LP 146
S+P P++P P P P P P+++Q P+ PPGS LP
Sbjct: 782 SSPGLGYCSPLAPPSPQLSLRTGPFQPPFLPPARRPRSLQESPAPRRAAGRLGPPGSPLP 841
Query: 147 EAAQPPSRPAAQPPSRPAFRSPRPVRGPH--------PRRAVVVAVLFGVQAPRR 193
+ +PPS P S P R PH P RAV V P R
Sbjct: 842 GSPRPPSPPLGLCHSPRRSSLNLPSRLPHTWRRLSEPPTRAVKPQVRLPFHRPPR 896
Score = 29.3 bits (64), Expect = 5.7
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 12/91 (13%)
Query: 95 PWRELTL--PVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPG-SLPEAAQP 151
P E TL P PA+ P +P PP P+ + P + L P S P AA
Sbjct: 1012 PEEEATLGDPQLPAETKPPTPAPPKDVTPPKDITPPK--DVLPEQKTLRPSLSYPLAACD 1069
Query: 152 PSRPAAQPP-----SRPAFRSP-RPVRGPHP 176
+R A PP + P +P P+R P P
Sbjct: 1070 QTR-ATWPPWHRWGTLPQAAAPLAPIRAPEP 1099
>gi|13273315 homeobox B4 [Homo sapiens]
Length = 251
Score = 48.9 bits (115), Expect = 7e-06
Identities = 26/61 (42%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 107 DPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALP-PGSLPEA--AQPPSRPAAQPPSRP 163
DP PP P P PPP + PR P P LP PG EA + PP P AQ P P
Sbjct: 70 DPGPPPPPPPPPPPPPPPGLSPRAPAPPPAGALLPEPGQRCEAVSSSPPPPPCAQNPLHP 129
Query: 164 A 164
+
Sbjct: 130 S 130
Score = 42.0 bits (97), Expect = 9e-04
Identities = 36/119 (30%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 56 ADPIPGNARAGVARTEQRDHSQSSPPCR--RLASYSFWSSAPWRELTLPVSPADPAAPPS 113
+D +P + G QR S P R A+ + A R+ P P P PP
Sbjct: 26 SDYLPSDHSPGYYAGGQRRESSFQPEAGFGRRAACTVQRYAACRDPGPPPPPPPPPPPPP 85
Query: 114 ----SPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSP 168
SP AP PP A+ P P + + PP P AQ P P+ PS A + P
Sbjct: 86 PPGLSPRAPAPPPAGALLPEPGQRCEAVSSSPPP--PPCAQNPLHPS---PSHSACKEP 139
>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
isoform a [Homo sapiens]
Length = 1749
Score = 48.9 bits (115), Expect = 7e-06
Identities = 59/194 (30%), Positives = 68/194 (35%), Gaps = 19/194 (9%)
Query: 109 AAPPS--SPHAPTRPP-PQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAF 165
A PS +P P P PQ P P G+ + PP PA QP +
Sbjct: 721 AGSPSLKTPDGPVPGPGPQGAAPEPL----GASVQRDSAQGRPCPPPQAPANQPEGASSA 776
Query: 166 RSPRPVRGPHPRRAVVVAVLFGVQAP-RRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLH 224
PV P P +A + V G P VA GGLR D P A R H
Sbjct: 777 APGSPVPAP-PTKASALPVEQGPAEPIPPGVASGGLRPDALGPTTAHHGPR--------H 827
Query: 225 AATVQRPRLGRGPSRPPRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQ 284
R + P + P GP G Q V R P +RRL C A PL
Sbjct: 828 PPKPPRSKATERPGQEPEGP-GATPAGERDDQSPDSVPERPRPADRRLCL-PCVDASPLP 885
Query: 285 GGATLPSSLPAPRL 298
G PS A RL
Sbjct: 886 GRTACPSLQEATRL 899
Score = 33.5 bits (75), Expect = 0.30
Identities = 46/194 (23%), Positives = 67/194 (34%), Gaps = 50/194 (25%)
Query: 10 QDKPGTFRNNGEKKGVDDPQLALNLLLFLPLAAGGRCRVPSGLRRLADPIPGNARAGVA- 68
+D+P + E++G L A + P G P+PG G A
Sbjct: 690 RDQPALAQEESEERGGQREGEGEEKLSLEAHAGSPSLKTPDG------PVPGPGPQGAAP 743
Query: 69 ----RTEQRDHSQSSP--PCRRLASYSFWSSA----------PWRELTLPVS--PADPAA 110
+ QRD +Q P P + A+ +S+ P + LPV PA+P
Sbjct: 744 EPLGASVQRDSAQGRPCPPPQAPANQPEGASSAAPGSPVPAPPTKASALPVEQGPAEPIP 803
Query: 111 P-------------PSSPHA----PTRPPPQAVQPRPSEPTPGSEALP--------PGSL 145
P P++ H P +PP RP + G A P P S+
Sbjct: 804 PGVASGGLRPDALGPTTAHHGPRHPPKPPRSKATERPGQEPEGPGATPAGERDDQSPDSV 863
Query: 146 PEAAQPPSRPAAQP 159
PE +P R P
Sbjct: 864 PERPRPADRRLCLP 877
Score = 29.6 bits (65), Expect = 4.4
Identities = 55/213 (25%), Positives = 75/213 (35%), Gaps = 22/213 (10%)
Query: 125 AVQPRPSEPTPGSEALPPGS-LPEAAQPPSRPAAQPPSRPAFRSPRPVRGPHPR-RAVVV 182
+V P P EP+PG LP S A P P P A + P + +V+
Sbjct: 626 SVAPAP-EPSPGF--LPVNSDTGLVAVPGPVPGQHPCGEEATQLPAAFTSEATHFKPIVL 682
Query: 183 AVLFGVQAPRRDVA-EGGLRRDGRRPGLAPQRGRGGLLLVVLHAA-----TVQRPRLGRG 236
A V + +A E R G+R G ++ L + HA T P G G
Sbjct: 683 AQNASVARDQPALAQEESEERGGQREGEGEEK-----LSLEAHAGSPSLKTPDGPVPGPG 737
Query: 237 PSRPPRGPVGVCRPQVAQRQRLARVCVR-SLPGNRRLATRSCPAAFPLQGGATLPSSLPA 295
P P+G V + R C P N+ S P+ T S+LP
Sbjct: 738 PQGAAPEPLGA---SVQRDSAQGRPCPPPQAPANQPEGASSAAPGSPVPAPPTKASALPV 794
Query: 296 PRLHLGSLLPSSSGGARLGDAAG--TTHFQPAH 326
+ + P + G DA G T H P H
Sbjct: 795 EQGPAEPIPPGVASGGLRPDALGPTTAHHGPRH 827
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 48.5 bits (114), Expect = 9e-06
Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 10/98 (10%)
Query: 93 SAPWRELTLPVSPADPAAP------PSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLP 146
++P + P P PAA P+SP A PP + P + PTP P ++P
Sbjct: 1001 ASPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVP 1060
Query: 147 EAAQPPSRPAAQP----PSRPAFRSPRPVRGPHPRRAV 180
+P S AA P P+ PA P P P AV
Sbjct: 1061 TPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAV 1098
Score = 48.5 bits (114), Expect = 9e-06
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 93 SAPWRELTLPVSPADPAAP------PSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLP 146
++P + P P PAA P+SP A P + P + PTP A P ++P
Sbjct: 1066 TSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVP 1125
Query: 147 EAAQPPSRPAAQP-PSRPAFRSPRPVRGPHPRRAVVVAV 184
+P S AA P P PAF +P V P + VAV
Sbjct: 1126 TPEEPASPAAAVPTPEEPAFPAP-AVPTPEESASAAVAV 1163
Score = 45.8 bits (107), Expect = 6e-05
Identities = 33/125 (26%), Positives = 47/125 (37%), Gaps = 4/125 (3%)
Query: 60 PGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPT 119
P + A V E+ ++ P + + P E T P + P+SP A
Sbjct: 1000 PASPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAV 1059
Query: 120 RPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQP----PSRPAFRSPRPVRGPH 175
P + P + PTP P ++P +P S AA P P+ PA P P
Sbjct: 1060 PTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPAS 1119
Query: 176 PRRAV 180
P AV
Sbjct: 1120 PAAAV 1124
Score = 45.1 bits (105), Expect = 1e-04
Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 10/98 (10%)
Query: 93 SAPWRELTLPVSPADPAAP------PSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLP 146
++P + P P PAA P+SP A P + P + PTP P ++P
Sbjct: 1053 TSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVP 1112
Query: 147 EAAQPPSRPAAQP----PSRPAFRSPRPVRGPHPRRAV 180
+P S AA P P+ PA P P P AV
Sbjct: 1113 TPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAV 1150
Score = 44.3 bits (103), Expect = 2e-04
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 18/100 (18%)
Query: 99 LTLPVS-----PADPAAPPSSPHAPTRP---------PPQAVQPRPSEPTPGSEALPPGS 144
+T+P++ P P P ++ HAP P P + P + PTP P +
Sbjct: 960 ITVPITEEDGTPEGPVTPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAA 1019
Query: 145 LPEAAQPPSRPAAQP----PSRPAFRSPRPVRGPHPRRAV 180
+P +P S AA P P+ PA P P P AV
Sbjct: 1020 VPTPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAV 1059
Score = 41.6 bits (96), Expect = 0.001
Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 10/98 (10%)
Query: 93 SAPWRELTLPVSPADPAAP------PSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLP 146
++P + P P PAA P+SP A P + P + PTP A P ++P
Sbjct: 1079 TSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVP 1138
Query: 147 EAAQP----PSRPAAQPPSRPAFRSPRPVRGPHPRRAV 180
+P P+ P + + A P P P AV
Sbjct: 1139 TPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAV 1176
Score = 41.2 bits (95), Expect = 0.001
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 18/113 (15%)
Query: 93 SAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSE------PTPGSEALPPGSLP 146
++P + P PA PAA +P P P P P S PTP A P ++P
Sbjct: 1118 ASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVP 1177
Query: 147 EAAQPPSRPAA----QPPSRPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDV 195
A+ S A + P+ PA P P A +VA L +P V
Sbjct: 1178 TPAESASFAAVVATLEEPTSPAASVPTP--------AAMVATLEEFTSPAASV 1222
Score = 38.5 bits (88), Expect = 0.009
Identities = 26/101 (25%), Positives = 40/101 (39%)
Query: 60 PGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPT 119
P + A V+ E+ ++ P + S + EL+ P + P+SP A
Sbjct: 1228 PASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEELSSPAASVPTPEEPASPAAAV 1287
Query: 120 RPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPP 160
+ P + PTP A+P S+P P AA PP
Sbjct: 1288 SNLEEPASPAAAVPTPEVAAIPAASVPTPEVPAIPAAAVPP 1328
Score = 29.3 bits (64), Expect = 5.7
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Query: 92 SSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQP 151
S++P + P A AA ++ PT P P T P S+P + +P
Sbjct: 1169 SASPAAAVPTPAESASFAAVVATLEEPTSPAASVPTPAAMVATLEEFTSPAASVPTSEEP 1228
Query: 152 PSRPAA----QPPSRPAFRSP 168
S AA + P+ PA P
Sbjct: 1229 ASLAAAVSNPEEPTSPAAAVP 1249
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 48.5 bits (114), Expect = 9e-06
Identities = 65/249 (26%), Positives = 76/249 (30%), Gaps = 21/249 (8%)
Query: 88 YSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPP---QAVQPRPSEPTPGSEALPPGS 144
+ F S P L P P S P P PPP Q QP P +P P + PP
Sbjct: 29 HDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPP--QQPPPHQ 86
Query: 145 LPEAAQPPSRPAAQPPSRPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDG 204
P QP + PP + + + P +GP P V A AP G G
Sbjct: 87 PPPHPQPHQQQQPPPPPQDSSK-PVVAQGPGPAPGVGSAPPASSSAPPATPPTSG-APPG 144
Query: 205 RRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRPPRGPVGVCRPQVAQRQRLARVCVR 264
PG P A T P G P PP V PQ
Sbjct: 145 SGPGPTP---------TPPPAVTSAPP--GAPPPTPPSSGVPTTPPQAGGPPPPPAAVPG 193
Query: 265 SLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSGGARLGDAAGTTHFQP 324
PG ++ P + GG P P G P GG G H P
Sbjct: 194 PGPGPKQGPGPGGPKGGKMPGGPK-PGGGPGLSTPGGHPKPPHRGGGE--PRGGRQHHPP 250
Query: 325 AHLSHAAAP 333
H H P
Sbjct: 251 YHQQHHQGP 259
Score = 47.4 bits (111), Expect = 2e-05
Identities = 53/188 (28%), Positives = 74/188 (39%), Gaps = 34/188 (18%)
Query: 105 PADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPA 164
PA +APP++P PP P P+ P P + PPG A PP+ P++ P+
Sbjct: 126 PASSSAPPATPPTSGAPPGSGPGPTPTPP-PAVTSAPPG-----APPPTPPSSGVPT--- 176
Query: 165 FRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLH 224
+P GP P A V G P++ GG + G+ PG G GL H
Sbjct: 177 --TPPQAGGPPPPPAAVPGPGPG---PKQGPGPGG-PKGGKMPGGPKPGGGPGLSTPGGH 230
Query: 225 AATVQR----PRLGR------------GPSRPPRGPVGVCRPQVAQRQRL-ARVCVRSLP 267
R PR GR GP PP GP G +++ + A + + P
Sbjct: 231 PKPPHRGGGEPRGGRQHHPPYHQQHHQGP--PPGGPGGRSEEKISDSEGFKANLSLLRRP 288
Query: 268 GNRRLATR 275
G + R
Sbjct: 289 GEKTYTQR 296
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 48.1 bits (113), Expect = 1e-05
Identities = 53/205 (25%), Positives = 70/205 (34%), Gaps = 32/205 (15%)
Query: 54 RLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPS 113
R A P P + + +R S S PP RR S S PA PP
Sbjct: 527 RSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPS------------------PAPPPR 568
Query: 114 SPHAPTRPPPQAVQ---PRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSPRP 170
PT PP + PR P+P + P + PP R A PP P R+
Sbjct: 569 RRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRAS-- 626
Query: 171 VRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATVQR 230
P P+R V P + + +R R P L+ + +G A +
Sbjct: 627 -PSPPPKRRV------SHSPPPKQRSSPVTKR--RSPSLSSKHRKGSSPSRSTREARSPQ 677
Query: 231 PRLGRGPSRPPRGPVGVCRPQVAQR 255
P PS PR P P +R
Sbjct: 678 PNKRHSPSPRPRAPQTSSSPPPVRR 702
Score = 38.1 bits (87), Expect = 0.012
Identities = 43/173 (24%), Positives = 59/173 (34%), Gaps = 12/173 (6%)
Query: 49 PSGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSP--- 105
P+ RR P P R R + S PP RR S +S R + P
Sbjct: 554 PTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRR 613
Query: 106 -ADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPA 164
A P PP +P+ PP + V P P S + P + + ++ S
Sbjct: 614 TASPPPPPKRRASPSPPPKRRVSHSP-PPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTRE 672
Query: 165 FRSPRPVR----GPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQR 213
RSP+P + P PR + RR + RR P P R
Sbjct: 673 ARSPQPNKRHSPSPRPRAPQTSS---SPPPVRRGASSSPQRRQSPSPSTRPIR 722
Score = 33.5 bits (75), Expect = 0.30
Identities = 40/133 (30%), Positives = 55/133 (41%), Gaps = 22/133 (16%)
Query: 49 PSGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRR-----------LASYSFWSSAPWR 97
P R + P P RA + +R S S PP +R L+S S+P R
Sbjct: 609 PPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSR 668
Query: 98 ELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAA 157
SP P+ H+P+ P P+A Q S P A S P+ Q PS P+
Sbjct: 669 STREARSPQ-----PNKRHSPS-PRPRAPQTSSSPPPVRRGA---SSSPQRRQSPS-PST 718
Query: 158 QPPSRPAFRSPRP 170
+P R + R+P P
Sbjct: 719 RPIRRVS-RTPEP 730
Score = 33.1 bits (74), Expect = 0.40
Identities = 42/157 (26%), Positives = 57/157 (36%), Gaps = 37/157 (23%)
Query: 53 RRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPP 112
R+ P P + V R +R HS+S P R S S S AP ++ P P +P+
Sbjct: 175 RKSRSPSPRRRSSPVRRERKRSHSRS--PRHRTKSRSP-SPAPEKKEKTPELP-EPSVKV 230
Query: 113 SSPHAPTR---------PPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRP 163
P P P+ + P P EP+P + E +P SR ++ SR
Sbjct: 231 KEPSVQEATSTSDILKVPKPEPI-PEPKEPSPEKNSKKEKE-KEKTRPRSRSRSKSRSRT 288
Query: 164 AFRSPR----------------------PVRGPHPRR 178
RSP P R P PRR
Sbjct: 289 RSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRR 325
Score = 33.1 bits (74), Expect = 0.40
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Query: 113 SSPHAPTRPPPQAVQPRPSEPTPGSEALPPG-SLPEAAQPPSRPAAQPPSRPAFRSPRPV 171
SS + +R PP+ R S P + L P S P PS PA PP SP P
Sbjct: 361 SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPK--TRHSPTPQ 418
Query: 172 RGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQR 213
+ R++ V+V G + + +G +R+ P P++
Sbjct: 419 QSNRTRKS-RVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRK 459
Score = 28.9 bits (63), Expect = 7.5
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 116 HAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSPRPVR--- 172
H+P+R + + R E +P S P + S A PP R +P P R
Sbjct: 523 HSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTP 582
Query: 173 GPHPRR 178
P PRR
Sbjct: 583 SPPPRR 588
>gi|236459851 ubinuclein 2 [Homo sapiens]
Length = 1347
Score = 47.8 bits (112), Expect = 2e-05
Identities = 39/110 (35%), Positives = 47/110 (42%), Gaps = 19/110 (17%)
Query: 79 SPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSE 138
SP RR A Y P RE P P PP P R P +A P P EP P S+
Sbjct: 13 SPVRRREAEYP----GPERE------PEYPREPPRLEPQPYREPARAEPPAPREPAPRSD 62
Query: 139 ALPPG---SLPE----AAQPPSRPAAQP--PSRPAFRSPRPVRGPHPRRA 179
A PP LP+ A+PP +P P P P P++ P PR +
Sbjct: 63 AQPPSREKPLPQREVSRAEPPMSLQREPPRPEPPPPFPPLPLQPPPPRES 112
>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
Length = 379
Score = 47.4 bits (111), Expect = 2e-05
Identities = 80/288 (27%), Positives = 102/288 (35%), Gaps = 43/288 (14%)
Query: 39 PLAAGGRCRVPSGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRE 98
PL GG P GL+ L P R GV T + + + RR P
Sbjct: 76 PLRPGGWA--PDGLKHLWAP---TGRPGVPNTAAGEDADVAACPRRGEEEEGGGGFPHFG 130
Query: 99 LTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQ 158
+ S A P P+ PH R + P P PG E P P AA PP P+++
Sbjct: 131 VR---SCAPPGRCPAPPHP--RESTTSFASAPPRPAPGLE---PQRGP-AASPPQEPSSR 181
Query: 159 PPSRPAFRS---------PRP--------VRGPHPRRAVVVAVLFGVQAPRRDVAEGGLR 201
PPS PA S PRP V G P A A A G LR
Sbjct: 182 PPSPPAGLSTEPAGPGTAPRPFLPGQPAEVDGNPPPAAPEAPAASPSTASPAPAAPGDLR 241
Query: 202 RDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRPP-RGPVGVCRPQVAQRQRLAR 260
++ + R L + P L RGP RPP +GP A+++RL
Sbjct: 242 QEH-----FDRLIRRSKLWCYAKGFALDTPSLRRGPERPPAKGPA----RGAAKKRRLPA 292
Query: 261 VCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSS 308
R+ R T + F L P +L G L P+SS
Sbjct: 293 PPPRTAQPRRPAPTLPTTSTFSLLNCFPCPPALVVG--EDGDLKPASS 338
Score = 28.5 bits (62), Expect = 9.7
Identities = 64/235 (27%), Positives = 78/235 (33%), Gaps = 55/235 (23%)
Query: 106 ADPAAPPSSPHAPT-RPPPQAVQPRP----------SEPTPGSEALPPGSLPEAAQPPSR 154
A PA+P SP +PT R P + Q + P + +L PG AA+ P
Sbjct: 11 AVPASPRGSPCSPTPRKPCRGTQEFSPLCLRALAFCALAKPRASSLGPGPGELAARSPVL 70
Query: 155 PAAQPPSRPAFRSP-------RPVRGPHPRRAVVVAVLFGVQAPRRDVAE---GGLRRDG 204
Q P RP +P P P PRR E GG G
Sbjct: 71 RGPQAPLRPGGWAPDGLKHLWAPTGRPGVPNTAAGEDADVAACPRRGEEEEGGGGFPHFG 130
Query: 205 RR----PGL--APQRGRGGLLLVVLHAATVQRPRLG----RGP---------SRPPRGPV 245
R PG AP R A+ RP G RGP SRPP P
Sbjct: 131 VRSCAPPGRCPAPPHPRES---TTSFASAPPRPAPGLEPQRGPAASPPQEPSSRPPSPPA 187
Query: 246 GV----CRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAP 296
G+ P A R LPG + P A P A+ ++ PAP
Sbjct: 188 GLSTEPAGPGTAPRP--------FLPGQPAEVDGNPPPAAPEAPAASPSTASPAP 234
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 47.4 bits (111), Expect = 2e-05
Identities = 65/233 (27%), Positives = 83/233 (35%), Gaps = 35/233 (15%)
Query: 104 SPADPAAPPSSPH-APTRPPPQ------AVQPRPSEPTPGSEALPPG-SLPEAAQPPS-- 153
+P PAA P SP P P P+ AV P + +P + P G S P AA PPS
Sbjct: 985 APTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPK 1044
Query: 154 -RPAAQP-----PSRPAFRSPRPVRGP--HPRRAVVVAVLFGVQAPRRDVAEGGLRRDGR 205
PAA P P+ PA P P GP + +P+ A +
Sbjct: 1045 GSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPM 1104
Query: 206 RPGLAPQRGRGGLL------LVVLHAATVQRPRLGRGPSRPPRGPVGVCRPQVAQRQRLA 259
P P +GGL AAT P+ G P P + + LA
Sbjct: 1105 PPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLA 1164
Query: 260 RVCVRSLPGNRRLATRSCPAAFP--LQGGATLPSSLPAPRLHLGSLLPSSSGG 310
+ P + PAA P +GG PS AP + PS GG
Sbjct: 1165 TPPPKGAP--------TTPAATPPSPKGGLATPSPKGAPTTP-AATPPSPKGG 1208
Score = 46.6 bits (109), Expect = 3e-05
Identities = 59/208 (28%), Positives = 77/208 (37%), Gaps = 32/208 (15%)
Query: 104 SPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSL--PEAAQPPSRPAAQPPS 161
+P PAA P SP PP P TP S P G L P P+ PAA PPS
Sbjct: 1125 APTTPAATPPSPKGGLATPPPKGAPTTPAATPPS---PKGGLATPPPKGAPTTPAATPPS 1181
Query: 162 -RPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLL- 219
+ +P P P A +P+ +A + P P +GGL
Sbjct: 1182 PKGGLATPSPKGAPTTPAAT-------PPSPKGGLATPSPKGAPTTPAATPPSPKGGLAT 1234
Query: 220 -----LVVLHAATVQRPRLGRGPSRPPRGPVGVCRPQVAQ----RQRLARVCVRSLPGNR 270
AAT P+ GP+ PP P G P A + LA + P N
Sbjct: 1235 PSPKGAPTTPAATPPSPK--GGPATPP--PKGAPTPPAATPPSLKGGLATPPHKGAP-NP 1289
Query: 271 RLAT----RSCPAAFPLQGGATLPSSLP 294
+ T + PA P +G T P++ P
Sbjct: 1290 AVVTPPSPKGGPATSPPKGAPTPPAATP 1317
Score = 45.4 bits (106), Expect = 8e-05
Identities = 56/215 (26%), Positives = 80/215 (37%), Gaps = 34/215 (15%)
Query: 102 PVSPAD-PAAPPSSPHAPT---RPPPQAVQPRPSEPTPGSEALPPGS-----LPEAAQPP 152
P PA P +P SP P P P AV P + TP A P S P + + P
Sbjct: 1310 PTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGP 1369
Query: 153 SRPAAQPPSR--PAFRSPRPVRG---PHPR---RAVVVAVLFGVQAPRRDVAEGGLRRDG 204
+ PAA P + PA P P RG P P+ + V L +AP V G
Sbjct: 1370 TPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREG----- 1424
Query: 205 RRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRPPRGPVGVCRPQVAQRQRLARVCVR 264
A +G L + ++++ P P P P + + +
Sbjct: 1425 -----AATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTL---PAVTPPSPK 1476
Query: 265 SLPGNRRLATRSCPAAFPL----QGGATLPSSLPA 295
P +++AT S P P G TLP+ +P+
Sbjct: 1477 EPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPS 1511
Score = 43.5 bits (101), Expect = 3e-04
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Query: 56 ADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSP 115
A P P A A + ++++P + + + AP P SP A PS
Sbjct: 901 ATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPK 960
Query: 116 HAPTRPPPQAVQPR--PSEPTPGSEALPPGSLPEAAQ-PPSRPAAQ-PPSRPAFRSPRPV 171
APT P P+ P+ P+P PP + P + + P+ P+ + P+ PA P P
Sbjct: 961 WAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPK 1020
Query: 172 RGP 174
P
Sbjct: 1021 GSP 1023
Score = 42.7 bits (99), Expect = 5e-04
Identities = 71/266 (26%), Positives = 87/266 (32%), Gaps = 45/266 (16%)
Query: 49 PSGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADP 108
PS LA P P A A T + P + AP P SP
Sbjct: 1157 PSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPK--------GAPTTPAATPPSPKGG 1208
Query: 109 AAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFRSP 168
A PS APT P P+ TP + P AA PPS P P + P +P
Sbjct: 1209 LATPSPKGAPTTPAATPPSPKGGLATPSPKGAP---TTPAATPPS-PKGGPATPPPKGAP 1264
Query: 169 RPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHAATV 228
P P +A AP V + G P +P +G AAT
Sbjct: 1265 TPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGG--PATSPPKG-----APTPPAATP 1317
Query: 229 QRPRLGRGPSRPPRG---PVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFP-LQ 284
P+ G + PP+G P V P T + PA P +
Sbjct: 1318 PSPK-GSPGTPPPKGAPTPPAVTPPSPK-------------------GTPTLPATTPSSK 1357
Query: 285 GGATLPSSLPAPRLHLGSLLPSSSGG 310
GG T PSS P + PS GG
Sbjct: 1358 GGPTTPSSKEGPTPPAAT--PSHKGG 1381
Score = 41.2 bits (95), Expect = 0.001
Identities = 56/214 (26%), Positives = 78/214 (36%), Gaps = 28/214 (13%)
Query: 104 SPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRP 163
+P PAA P S PP P P+ TP S P + P P+ PAA PPS
Sbjct: 1263 APTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKG-APTPPAATPPSPK 1321
Query: 164 AFRSPRPVRGPHPRRAVVVAVLFGVQA--PRRDVAEGG----LRRDGRRPGLAPQRGRGG 217
P +G AV G ++GG ++G P A +GG
Sbjct: 1322 GSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGG 1381
Query: 218 LLLVVLHAATVQRPRLGRGPSRP-PRG-PVGVCRPQVAQRQRLARVCVR----------- 264
A T P+ RGP+ P P+G P ++ ++ A R
Sbjct: 1382 ------PAMTPPSPK--RGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDL 1433
Query: 265 SLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRL 298
+ P ++ + PA +GG PSS P L
Sbjct: 1434 TPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTL 1467
Score = 40.0 bits (92), Expect = 0.003
Identities = 65/258 (25%), Positives = 79/258 (30%), Gaps = 39/258 (15%)
Query: 94 APWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSE-------ALPPG--- 143
AP P SP A P APT P P+ TP + A PP
Sbjct: 1148 APTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1207
Query: 144 --SLPEAAQPPSRPAAQPPS-RPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGL 200
+ P P+ PAA PPS + +P P P A + G P A
Sbjct: 1208 GLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAP--- 1264
Query: 201 RRDGRRPGLAPQRGRGGLLLV----VLHAATVQRPRLGRGPSRPPRGPVGVCRPQVAQRQ 256
P P +GGL + A V P GP+ P P G P A
Sbjct: 1265 ----TPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSP--PKGAPTPPAA--- 1315
Query: 257 RLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSGGARLGDA 316
+ P + P P T PS P L + PSS GG +
Sbjct: 1316 --------TPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPT--LPATTPSSKGGPTTPSS 1365
Query: 317 AGTTHFQPAHLSHAAAPA 334
A SH PA
Sbjct: 1366 KEGPTPPAATPSHKGGPA 1383
Score = 35.8 bits (81), Expect = 0.061
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 12/100 (12%)
Query: 94 APWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPR-PSEPTPGSEALPPG--------- 143
AP +P SP + A PSS P P + + P+ P +PP
Sbjct: 1502 APTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKT 1561
Query: 144 -SLPEAAQPPSRPAAQPPSRPAFRSPRPVRG-PHPRRAVV 181
++P + P+ P+++ S P +P +G P P+ ++
Sbjct: 1562 PAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLI 1601
Score = 35.4 bits (80), Expect = 0.080
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 48 VPSGLRRLADPIPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPAD 107
VPS + A P P A A + E SSPP ++Y S +EL +P +
Sbjct: 1555 VPSPKKTPAIPTPKEAPATPSSKEA-----SSPPAVTPSTYKGAPSP--KELLIPPAVTS 1607
Query: 108 PAAPPSSPHAPTRPPPQAVQPRPSEPTP-GSEALPPGSLPEAAQPPSRPAA 157
P+ P +P P PP + + P+ P P G+ PP + P+ PA+
Sbjct: 1608 PS-PKEAPTPPAVTPP-SPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPAS 1656
Score = 35.0 bits (79), Expect = 0.10
Identities = 57/233 (24%), Positives = 84/233 (36%), Gaps = 32/233 (13%)
Query: 92 SSAPWRELTLPVSPADPAAPPSSPHAPTRPP-PQAV------QPRPSEPTP-GSEALP-- 141
+SAP P S DP P +P +P PP P+ V + P+ P P G+ LP
Sbjct: 1449 TSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAV 1508
Query: 142 -PGS------LPEAAQPPSRPAAQPPSR--PAFRSPRPVRGPHPRRAVVVAVLFGVQAPR 192
P S P + + P P A S+ PA +P+ P + P+
Sbjct: 1509 IPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPK 1568
Query: 193 RDVAEGGLRRDGRRPGLAPQRGRGG---LLLVVLHAATVQRPRLGRGPS--RPPRGPVGV 247
A + P + P +G L++ A T P+ P PP G
Sbjct: 1569 EAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGP 1628
Query: 248 CRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSS---LPAPR 297
P V SL + + PA+ + GAT+P + LPA +
Sbjct: 1629 ATPAPKGTPTSPPVTPSSLKD-----SPTSPASVTCKMGATVPQASKGLPAKK 1676
Score = 33.9 bits (76), Expect = 0.23
Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 13/97 (13%)
Query: 94 APWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSL-------- 145
+P R +P DP +P P +P + P V R TP L P ++
Sbjct: 1388 SPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPV-TREGAATPSKGDLTPPAVTPVSLKKA 1446
Query: 146 PEAAQPPSRPAAQ----PPSRPAFRSPRPVRGPHPRR 178
P + P PA P+ PA P P P P++
Sbjct: 1447 PATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQ 1483
Score = 31.2 bits (69), Expect = 1.5
Identities = 52/234 (22%), Positives = 79/234 (33%), Gaps = 44/234 (18%)
Query: 95 PWRELTLPVSPADPAA-------------PPSSPHAPTRPPPQAVQPRPSEPTPGSEALP 141
P L+ PVSP + + P++ H+PT P P+ P PS TP S P
Sbjct: 820 PIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGA-PTPSAVTPLS---P 875
Query: 142 PGSLPEAAQPPSRPAAQPPSRPAFRSPRPVRG---PHPRRAVVVAVLF-------GVQAP 191
G + P + P+ P P G P P++A +++ AP
Sbjct: 876 KGV--------TLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAP 927
Query: 192 RRDVAEGGLRRDGRRPGLAPQRGRGG------LLLVVLHAATVQRPRLGRGPSRPPRGPV 245
+ A + P P +GG AAT P+ G P P
Sbjct: 928 KGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPT 987
Query: 246 GVCRPQVAQRQRLARVCVRSLPGNRRL---ATRSCPAAFPLQGGATLPSSLPAP 296
+ + A + P + + + PAA P GA+ P + P
Sbjct: 988 PPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPP 1041
Score = 31.2 bits (69), Expect = 1.5
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 68 ARTEQRDHSQSSP--PCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQA 125
A+ + HS P P AS ++A + L P S + AAP P P P
Sbjct: 1749 AKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVP 1808
Query: 126 VQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAFR--SPRPVRGPHPRRAVVV 182
P + P S PG + E+ PS+P A P P+ G P ++V+V
Sbjct: 1809 TLPPKQQFLPSS----PGLVLES---PSKPLAPADEDELLPLIPPEPISGGVPFQSVLV 1860
Score = 30.0 bits (66), Expect = 3.3
Identities = 38/165 (23%), Positives = 53/165 (32%), Gaps = 11/165 (6%)
Query: 92 SSAPWRELTLPVSPADPAA---------PPSSPHAPTRPPPQAVQPRPSEPTPGSEALPP 142
+S P +L SP PA+ P +S P + P A++ P P S +
Sbjct: 1638 TSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIIT 1697
Query: 143 GSLPEAAQPPSRPAAQPPSRPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRR 202
+ Q A PP P + +G P V A L VQ A+G
Sbjct: 1698 APTRKGPQTKKSSATSPPICPDPSAKNGSKG--PLSTVAPAPLLPVQKDSSKTAKGKDAS 1755
Query: 203 DGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRPPRGPVGV 247
+ LAP + L V S P PV +
Sbjct: 1756 HSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSL 1800
Score = 29.3 bits (64), Expect = 5.7
Identities = 28/109 (25%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 59 IPGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAP 118
+PG A V TEQ P + + SSA +T + P PP AP
Sbjct: 1 MPGEATETVPATEQE-----LPQPQAETAVLPMSSA--LSVTAALGQPGPTLPPPCSPAP 53
Query: 119 TRPPPQAVQPRPSEPTPGSEALPPGSL--PEAAQPPSRPAAQPPSRPAF 165
+ P A P+P + A P + P+++ + P P P F
Sbjct: 54 QQCPLSAANQASPFPSPSTIASTPLEVPFPQSSSGTALPLGTAPEAPTF 102
>gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3
[Homo sapiens]
Length = 650
Score = 47.0 bits (110), Expect = 3e-05
Identities = 37/132 (28%), Positives = 50/132 (37%), Gaps = 15/132 (11%)
Query: 88 YSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPE 147
Y+F++ A ++ P P PP P A +PPP P PG LP SL
Sbjct: 368 YAFFTQAGSQQ-----PPPQPQPPPPPPPASQQPPPPPPPQAPVRLPPGGPLLPSASLTR 422
Query: 148 AAQPPSRPAAQPPSRPAFRSPRPVRGPHPRRAVVVAVLFGVQ-------APRRDVAEGGL 200
QPP P S P +SP P P + +A +Q +P +
Sbjct: 423 GPQPPPLAVTVPSSLP--QSP-PENPGQPSMGIDIASAPALQQYRTSAGSPANQSPTSPV 479
Query: 201 RRDGRRPGLAPQ 212
G PG +PQ
Sbjct: 480 SNQGFSPGSSPQ 491
>gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1
[Homo sapiens]
Length = 634
Score = 47.0 bits (110), Expect = 3e-05
Identities = 37/132 (28%), Positives = 50/132 (37%), Gaps = 15/132 (11%)
Query: 88 YSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPE 147
Y+F++ A ++ P P PP P A +PPP P PG LP SL
Sbjct: 352 YAFFTQAGSQQ-----PPPQPQPPPPPPPASQQPPPPPPPQAPVRLPPGGPLLPSASLTR 406
Query: 148 AAQPPSRPAAQPPSRPAFRSPRPVRGPHPRRAVVVAVLFGVQ-------APRRDVAEGGL 200
QPP P S P +SP P P + +A +Q +P +
Sbjct: 407 GPQPPPLAVTVPSSLP--QSP-PENPGQPSMGIDIASAPALQQYRTSAGSPANQSPTSPV 463
Query: 201 RRDGRRPGLAPQ 212
G PG +PQ
Sbjct: 464 SNQGFSPGSSPQ 475
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 47.0 bits (110), Expect = 3e-05
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 106 ADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSR 162
A+PAAPP++P P PPP + P+ P P PP S P P PA PP++
Sbjct: 506 AEPAAPPAAPSTPA-PPPAVPKELPAPPAP-----PPASAPTPETEPEEPAQAPPAQ 556
Score = 39.3 bits (90), Expect = 0.006
Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 12/98 (12%)
Query: 64 RAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPP 123
RA A +R + P +RL + P P +PA P A P AP PPP
Sbjct: 483 RAACAEKLKRLDEKFGAPDKRL------KAEPAAPPAAPSTPAPPPAVPKELPAPPAPPP 536
Query: 124 QAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPS 161
S PTP +E P P A P+ A P+
Sbjct: 537 ------ASAPTPETEPEEPAQAPPAQSTPTPGVAAAPT 568
Score = 36.6 bits (83), Expect = 0.036
Identities = 33/114 (28%), Positives = 45/114 (39%), Gaps = 11/114 (9%)
Query: 109 AAPPSS-PHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSR----P 163
+APP+ P +P +P P P P P +AL PG+L +PP P R P
Sbjct: 671 SAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGAL---GRPPPMPPMNFDPRWMMIP 727
Query: 164 AFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRR---DGRRPGLAPQRG 214
+ PR ++G P V PR GG D P + +RG
Sbjct: 728 PYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSEPFDRHAPAMLRERG 781
Score = 36.2 bits (82), Expect = 0.047
Identities = 51/220 (23%), Positives = 73/220 (33%), Gaps = 25/220 (11%)
Query: 106 ADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRPAF 165
A+ + PP + P P P P P PPG P+ PP +P A A+
Sbjct: 393 AETSRPPETEPGPPAPKPPLPPPHRG---PAGNWGPPGDYPDRGGPPCKPPAPEDEDEAW 449
Query: 166 RSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRGGLLLVVLHA 225
R R AV +A RR E ++ RR A + R +
Sbjct: 450 RQRRKQSSSEISLAV-------ERARRRREEEERRMQEERRAACAEKLKR------LDEK 496
Query: 226 ATVQRPRLGRGPSRPPRGPVGVCRPQVAQRQRLARVCVRSLPGNRRLATRSCPAAFPLQG 285
RL P+ PP P P ++ A P A+ P P +
Sbjct: 497 FGAPDKRLKAEPAAPPAAPSTPAPPPAVPKELPA-------PPAPPPASAPTPETEPEEP 549
Query: 286 GATLPS-SLPAPRLHLGSLLPSSSGGARLGDAAGTTHFQP 324
P+ S P P + L S GG+ ++G+ P
Sbjct: 550 AQAPPAQSTPTPGVAAAPTL-VSGGGSTSSTSSGSFEASP 588
Score = 34.7 bits (78), Expect = 0.14
Identities = 37/121 (30%), Positives = 44/121 (36%), Gaps = 7/121 (5%)
Query: 97 RELTLPVSPADP--AAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSR 154
R T PV P P A+ P P PP + P EP P PPGS A
Sbjct: 822 RSETPPVPPPPPYLASYPGFPENGAPGPPISRFPL-EEPGPRPLPWPPGSDEVAKIQTPP 880
Query: 155 PAAQPPSRPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRD---VAEGGLRRDGRRPGLAP 211
P +PP + P G P R V G PRR+ G R R G+ P
Sbjct: 881 PKKEPPKEETAQLTGPEAGRKPARGVGSGGQ-GPPPPRRESRTETRWGPRPGSSRRGIPP 939
Query: 212 Q 212
+
Sbjct: 940 E 940
Score = 34.7 bits (78), Expect = 0.14
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 106 ADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSL-PEAAQPPSRPAAQPPSRPA 164
A P P P RPPP A + P + LPPG + E +Q R P RP+
Sbjct: 1695 AVPCEGPPGSEPPRRPPP-APHDGDRKELPREQPLPPGPIGTERSQRTDRGTEPGPIRPS 1753
Query: 165 FRSPRPVR 172
R PV+
Sbjct: 1754 HRPGPPVQ 1761
Score = 34.3 bits (77), Expect = 0.18
Identities = 28/94 (29%), Positives = 34/94 (36%), Gaps = 23/94 (24%)
Query: 101 LPVSPADPAA----PPSSPHAPTRPPPQAVQPRPSEPTPGSEALP-------------PG 143
LP PA P A P + P P + P P S PTPG A P G
Sbjct: 528 LPAPPAPPPASAPTPETEPEEPAQAP-----PAQSTPTPGVAAAPTLVSGGGSTSSTSSG 582
Query: 144 SLPEAAQPPSRPAAQPPSRPAFRSPRPVRGPHPR 177
S + P P+ + P P P P P P+
Sbjct: 583 SFEASPVEPQLPSKEGPEPPE-EVPPPTTPPVPK 615
Score = 33.9 bits (76), Expect = 0.23
Identities = 49/185 (26%), Positives = 67/185 (36%), Gaps = 22/185 (11%)
Query: 101 LPVSPADPAAPPS-SPHAPTRPPPQAVQPR--PSEPTPGSEALPPGSLPEAAQPPSRPAA 157
+P++P P APPS +P T + PR PS G PP P PP++ A
Sbjct: 1135 VPLAPPPPGAPPSPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQVCP-GWSPPAKSLA 1193
Query: 158 --QPPSRPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLR---RDGRRPGLAPQ 212
+PP+ P S P++ + P VA GG G G P+
Sbjct: 1194 PKKPPTGPLPPSKEPLKEKL------------IPGPLSPVARGGSNGGSNVGMEDGERPR 1241
Query: 213 RGRGGLLLVVLHAATVQRPRLGR-GPSRPPRGPVGVCRPQVAQRQRLARVCVRSLPGNRR 271
R R G +R + R +R G + P A A V P RR
Sbjct: 1242 RRRHGRAQQQDKPPRFRRLKQERENAARGSEGKPSLTLPASAPGPEEALTTVTVAPAPRR 1301
Query: 272 LATRS 276
A +S
Sbjct: 1302 AAAKS 1306
Score = 32.0 bits (71), Expect = 0.88
Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 11/80 (13%)
Query: 80 PPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHAPTRPPPQAVQPRPSEPTPGSEA 139
PP R + + W P + P +P APP +PPP PT E
Sbjct: 915 PPRRESRTETRWGPRPGSSRR-GIPPEEPGAPPRRAGPIKKPPP---------PTK-VEE 963
Query: 140 LPPGSLPEAAQPPSRPAAQP 159
LPP L + + P P P
Sbjct: 964 LPPKPLEQGDETPKPPKPDP 983
Score = 31.2 bits (69), Expect = 1.5
Identities = 32/111 (28%), Positives = 42/111 (37%), Gaps = 10/111 (9%)
Query: 56 ADPIPGNARAGVARTEQRDHSQSSP----PCRRLASYSFWSSAPWRELTLPVSPADPAAP 111
A P P A A TE + +Q+ P P +A+ S T S A
Sbjct: 530 APPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGS--TSSTSSGSFEAS 587
Query: 112 PSSPHAPTRP---PPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQP 159
P P P++ PP+ V P + P P E G P QPPS+ P
Sbjct: 588 PVEPQLPSKEGPEPPEEVPPPTTPPVPKVEPKGDGIGP-TRQPPSQGLGYP 637
Score = 30.4 bits (67), Expect = 2.6
Identities = 56/238 (23%), Positives = 80/238 (33%), Gaps = 37/238 (15%)
Query: 102 PVSPADPAAPPSSPHA---PTRPPPQA---VQPRPSEPTP-------GSEALPPGSLPEA 148
P P PP P + PPP + + +P P P G+EAL P
Sbjct: 1555 PFPPKRRERPPRKPELLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIWNRL 1614
Query: 149 AQPPSRPAAQPPSRPAFRSP----RPVRGPHPRRAVVVAVLFGVQ------APRRDVAEG 198
SR + +P S + P V G ++ L G +R +G
Sbjct: 1615 HTATSRKSYRPSSMEPWMEPLSPFEDVAGTEMSQSDSGVDLSGDSQVSSGPCSQRSSPDG 1674
Query: 199 GLRRDGRRPGLAPQRGRGGLLLVVLHAATVQRPRLGRGPSRPPRGPVGVCRPQVAQRQRL 258
GL+ P P+R G L+A + P P RPP P R ++ + Q
Sbjct: 1675 GLKGAAEGP---PKRPGGS---SPLNAVPCEGPPGSEPPRRPPPAPHDGDRKELPREQ-- 1726
Query: 259 ARVCVRSLPGNRRLATRSCPAAFPLQGGATLPSSLPAPRLHLGSLLPSSSGGARLGDA 316
LP RS + G PS P P + G+ S +GD+
Sbjct: 1727 ------PLPPGPIGTERSQRTDRGTEPGPIRPSHRPGPPVQFGTSDKDSDLRLVVGDS 1778
Score = 29.3 bits (64), Expect = 5.7
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 13/52 (25%)
Query: 112 PSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQPPSRPAAQPPSRP 163
P S A T PP++ QP P+ TP A+ P RP A P + P
Sbjct: 95 PKSSDASTAQPPES-QPLPASQTP------------ASNQPKRPPAAPENTP 133
Score = 28.5 bits (62), Expect = 9.7
Identities = 44/169 (26%), Positives = 55/169 (32%), Gaps = 19/169 (11%)
Query: 60 PGNARAGVARTEQRDHSQSSPPCRRLASYSFWSSAPWRELTLPVSPADP---------AA 110
PG +G+ E+ D SS S F AP P DP A
Sbjct: 746 PGVHPSGLVPRERSDSGGSS-------SEPFDRHAPAMLRERGTPPVDPKLAWVGDVFTA 798
Query: 111 PPSSPHAPTRPPPQAVQPRPSEPTPGSEALPPGSLPEAAQP--PSRPAAQPP-SRPAFRS 167
P+ P T P QA + +PP A+ P P A PP SR
Sbjct: 799 TPAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPYLASYPGFPENGAPGPPISRFPLEE 858
Query: 168 PRPVRGPHPRRAVVVAVLFGVQAPRRDVAEGGLRRDGRRPGLAPQRGRG 216
P P P P + VA + + E + G G P RG G
Sbjct: 859 PGPRPLPWPPGSDEVAKIQTPPPKKEPPKEETAQLTGPEAGRKPARGVG 907
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,187,153
Number of Sequences: 37866
Number of extensions: 1409141
Number of successful extensions: 30021
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 1734
Number of HSP's that attempted gapping in prelim test: 11417
Number of HSP's gapped (non-prelim): 11756
length of query: 359
length of database: 18,247,518
effective HSP length: 103
effective length of query: 256
effective length of database: 14,347,320
effective search space: 3672913920
effective search space used: 3672913920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.