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Search of human proteins with 239742057
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742057 PREDICTED: hypothetical protein XP_002342381 [Homo
sapiens]
(196 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753506 PREDICTED: hypothetical protein [Homo sapiens] 411 e-115
gi|239742057 PREDICTED: hypothetical protein XP_002342381 [Homo ... 411 e-115
gi|239748159 PREDICTED: hypothetical protein XP_002346542 [Homo ... 371 e-103
gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo ... 42 3e-04
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 41 6e-04
gi|239749325 PREDICTED: hypothetical protein [Homo sapiens] 41 6e-04
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 41 6e-04
gi|239509122 PREDICTED: hypothetical protein [Homo sapiens] 41 6e-04
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 41 6e-04
gi|188536004 zinc finger protein 469 [Homo sapiens] 41 6e-04
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens] 41 7e-04
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|222144283 hypothetical protein LOC65998 [Homo sapiens] 39 0.003
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 39 0.003
gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [H... 39 0.003
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 39 0.004
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ... 39 0.004
gi|239754797 PREDICTED: hypothetical protein [Homo sapiens] 38 0.006
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 38 0.006
gi|239743415 PREDICTED: hypothetical protein [Homo sapiens] 38 0.006
gi|26787962 advanced glycosylation end product-specific receptor... 37 0.008
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 37 0.011
gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens] 37 0.011
gi|115511036 alpha-kinase 3 [Homo sapiens] 37 0.011
gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo sapi... 37 0.011
gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo ... 37 0.014
gi|110832843 TBP-associated factor 4 [Homo sapiens] 37 0.014
gi|169217659 PREDICTED: similar to ectonucleotide pyrophosphatas... 36 0.018
>gi|239753506 PREDICTED: hypothetical protein [Homo sapiens]
Length = 196
Score = 411 bits (1056), Expect = e-115
Identities = 196/196 (100%), Positives = 196/196 (100%)
Query: 1 MNEGSVRRGQESPFGPKEAEAAPGRGTRSPAWHDPRRRWLRFSARGVEAGGARAVAKSGL 60
MNEGSVRRGQESPFGPKEAEAAPGRGTRSPAWHDPRRRWLRFSARGVEAGGARAVAKSGL
Sbjct: 1 MNEGSVRRGQESPFGPKEAEAAPGRGTRSPAWHDPRRRWLRFSARGVEAGGARAVAKSGL 60
Query: 61 LGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVA 120
LGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVA
Sbjct: 61 LGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVA 120
Query: 121 PARVASQGRQPQLPADEKVGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQET 180
PARVASQGRQPQLPADEKVGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQET
Sbjct: 121 PARVASQGRQPQLPADEKVGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQET 180
Query: 181 FRPAYLASAGRHSDSD 196
FRPAYLASAGRHSDSD
Sbjct: 181 FRPAYLASAGRHSDSD 196
>gi|239742057 PREDICTED: hypothetical protein XP_002342381 [Homo
sapiens]
Length = 196
Score = 411 bits (1056), Expect = e-115
Identities = 196/196 (100%), Positives = 196/196 (100%)
Query: 1 MNEGSVRRGQESPFGPKEAEAAPGRGTRSPAWHDPRRRWLRFSARGVEAGGARAVAKSGL 60
MNEGSVRRGQESPFGPKEAEAAPGRGTRSPAWHDPRRRWLRFSARGVEAGGARAVAKSGL
Sbjct: 1 MNEGSVRRGQESPFGPKEAEAAPGRGTRSPAWHDPRRRWLRFSARGVEAGGARAVAKSGL 60
Query: 61 LGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVA 120
LGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVA
Sbjct: 61 LGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVA 120
Query: 121 PARVASQGRQPQLPADEKVGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQET 180
PARVASQGRQPQLPADEKVGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQET
Sbjct: 121 PARVASQGRQPQLPADEKVGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQET 180
Query: 181 FRPAYLASAGRHSDSD 196
FRPAYLASAGRHSDSD
Sbjct: 181 FRPAYLASAGRHSDSD 196
>gi|239748159 PREDICTED: hypothetical protein XP_002346542 [Homo
sapiens]
Length = 246
Score = 371 bits (953), Expect = e-103
Identities = 177/178 (99%), Positives = 178/178 (100%)
Query: 19 AEAAPGRGTRSPAWHDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRPGRGPGSAG 78
AEAAPGRGTRSPAW+DPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRPGRGPGSAG
Sbjct: 69 AEAAPGRGTRSPAWNDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRPGRGPGSAG 128
Query: 79 RCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQGRQPQLPADEK 138
RCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQGRQPQLPADEK
Sbjct: 129 RCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQGRQPQLPADEK 188
Query: 139 VGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQETFRPAYLASAGRHSDSD 196
VGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQETFRPAYLASAGRHSDSD
Sbjct: 189 VGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQETFRPAYLASAGRHSDSD 246
>gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo
sapiens]
Length = 870
Score = 42.0 bits (97), Expect = 3e-04
Identities = 49/167 (29%), Positives = 58/167 (34%), Gaps = 36/167 (21%)
Query: 15 GPKEAEAAPGRGTRSPAWHDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRPGRGP 74
G + E P R P W ARG G R RPGR
Sbjct: 441 GARAGETTPLGEARGPCW----------KARGAVPSG-------------RLRGRPGRVA 477
Query: 75 GSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHG---------PPPLRVAPARVA 125
G++GR G S+AR R P R G P +G G P P A V
Sbjct: 478 GASGRRGASQARGGTGRAPARLRRGRGMPGRVGNGVGEGRGASEPEGEPEPRARADLEVL 537
Query: 126 SQG--RQPQLP-ADEKVGEGDWPGGWGEALRPRAGSAAASTDRGRWG 169
G R LP E++G G PG + RAG AA+ G G
Sbjct: 538 QAGFERLQSLPELAERLG-GRCPGQVAHGVLARAGLLAAAARPGLAG 583
Score = 35.0 bits (79), Expect = 0.041
Identities = 28/89 (31%), Positives = 34/89 (38%), Gaps = 6/89 (6%)
Query: 82 PSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQGRQP------QLPA 135
P+ + PR E PRL GR +A P PL AP QP L
Sbjct: 756 PASPAASPCQAPRAPEKETEAPRLRGRATAVAPRPLPAAPGFSGLCVLQPFPARSRGLGV 815
Query: 136 DEKVGEGDWPGGWGEALRPRAGSAAASTD 164
+ G PG A PRAG+ A S +
Sbjct: 816 PSQQGPTGSPGCRDRASAPRAGAEAGSME 844
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 41.2 bits (95), Expect = 6e-04
Identities = 40/111 (36%), Positives = 48/111 (43%), Gaps = 20/111 (18%)
Query: 65 RASPRPGRGPGSAGRCGPSEARHREARVPRR----QEVGPRTPRLLGRRSAHGPPPL--- 117
RASP P P +A R P A + R +VG R R G+ PPPL
Sbjct: 134 RASPAPA-APQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQ-----PPPLTCR 187
Query: 118 --RVAPARVASQGRQPQLPADEKVGEGDWP---GGWGEALRPRAGSAAAST 163
R AP R A R+P LP + G G G WG P G+AAAS+
Sbjct: 188 RCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGP--GTAAASS 236
>gi|239749325 PREDICTED: hypothetical protein [Homo sapiens]
Length = 155
Score = 41.2 bits (95), Expect = 6e-04
Identities = 41/142 (28%), Positives = 53/142 (37%), Gaps = 14/142 (9%)
Query: 55 VAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGP 114
V +GL R++ PGRG G G + V +G R PR G R A P
Sbjct: 7 VGAAGLGAAHRSTAAPGRGVSVRGTVGRQQGGPGHGNVDHLPNLG-RQPRGAGSRGASAP 65
Query: 115 PPLR--VAPARVASQGRQPQLPADEKVGEGDWP---------GGWGEALRPRAGSAAAST 163
+R AP V G + + EG+ P GG E RP G+AAA
Sbjct: 66 RAVRTGAAPEVVVQSGHRSHASKRRFLEEGEAPARRLSERRRGGGKEESRP--GTAAAPG 123
Query: 164 DRGRWGKLKLRPTRQETFRPAY 185
R P +E RP +
Sbjct: 124 GRAGLYPRAAGPASREPARPTH 145
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 41.2 bits (95), Expect = 6e-04
Identities = 40/111 (36%), Positives = 48/111 (43%), Gaps = 20/111 (18%)
Query: 65 RASPRPGRGPGSAGRCGPSEARHREARVPRR----QEVGPRTPRLLGRRSAHGPPPL--- 117
RASP P P +A R P A + R +VG R R G+ PPPL
Sbjct: 134 RASPAPA-APQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQ-----PPPLTCR 187
Query: 118 --RVAPARVASQGRQPQLPADEKVGEGDWP---GGWGEALRPRAGSAAAST 163
R AP R A R+P LP + G G G WG P G+AAAS+
Sbjct: 188 RCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGP--GTAAASS 236
>gi|239509122 PREDICTED: hypothetical protein [Homo sapiens]
Length = 155
Score = 41.2 bits (95), Expect = 6e-04
Identities = 41/142 (28%), Positives = 53/142 (37%), Gaps = 14/142 (9%)
Query: 55 VAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGP 114
V +GL R++ PGRG G G + V +G R PR G R A P
Sbjct: 7 VGAAGLGAAHRSTAAPGRGVSVRGTVGRQQGGPGHGNVDHLPNLG-RQPRGAGSRGASAP 65
Query: 115 PPLR--VAPARVASQGRQPQLPADEKVGEGDWP---------GGWGEALRPRAGSAAAST 163
+R AP V G + + EG+ P GG E RP G+AAA
Sbjct: 66 RAVRTGAAPEVVVQSGHRSHASKRRFLEEGEAPARRLSERRRGGGKEESRP--GTAAAPG 123
Query: 164 DRGRWGKLKLRPTRQETFRPAY 185
R P +E RP +
Sbjct: 124 GRAGLYPRAAGPASREPARPTH 145
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 41.2 bits (95), Expect = 6e-04
Identities = 40/111 (36%), Positives = 48/111 (43%), Gaps = 20/111 (18%)
Query: 65 RASPRPGRGPGSAGRCGPSEARHREARVPRR----QEVGPRTPRLLGRRSAHGPPPL--- 117
RASP P P +A R P A + R +VG R R G+ PPPL
Sbjct: 134 RASPAPA-APQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQ-----PPPLTCR 187
Query: 118 --RVAPARVASQGRQPQLPADEKVGEGDWP---GGWGEALRPRAGSAAAST 163
R AP R A R+P LP + G G G WG P G+AAAS+
Sbjct: 188 RCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGGP--GTAAASS 236
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 41.2 bits (95), Expect = 6e-04
Identities = 49/163 (30%), Positives = 60/163 (36%), Gaps = 21/163 (12%)
Query: 8 RGQESPFGPKEA----EAAPGRGTRSPAWHDPRRRWLRFSARGVEAGGARAVAKSGLLGT 63
R +P P+ A E R R P DPR+R R A G E K+ L
Sbjct: 1005 RADPAPRVPRAAALPEETRSSRRRRLPPRKDPRKRKARGGAWGKELILKIVQQKNRLREY 1064
Query: 64 WRASPR------PGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPL 117
AS P RGPG GR G E R +E P+ PR R+ A G
Sbjct: 1065 DFASESEEDEQPPPRGPGFRGRRGRGEKRKEVELTQGPREDEPQKPRKAARQEAGGDG-- 1122
Query: 118 RVAPARVASQGRQPQLPADEKVGEGDWPGGWGEALRPRAGSAA 160
APA P+ P + G G P G + G+AA
Sbjct: 1123 --APA-------NPEEPGGSRPGPGRSPQARGPSRSLETGAAA 1156
Score = 32.3 bits (72), Expect = 0.26
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 16 PKEAEAAPGRGTRSPAWHDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASP-RPGRGP 74
P EA+A P +G + R + L+ + +++GGA + SG G RAS RP R
Sbjct: 933 PTEADA-PSQGRQQR-----RGKQLKLFRKDLDSGGAAEGSGSG--GGGRASGLRPRRND 984
Query: 75 GSAGRCGPSEARHREARVPRRQEVGPRTPR 104
G R P R R R + PR PR
Sbjct: 985 GLGERPPPRPRRPRTQAPGSRADPAPRVPR 1014
>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 40.8 bits (94), Expect = 7e-04
Identities = 52/171 (30%), Positives = 57/171 (33%), Gaps = 44/171 (25%)
Query: 9 GQESPFGPKEAEAAPGRGTRSPAWHDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASP 68
G E G A A G+G R P R AR GGAR G G P
Sbjct: 26 GGEEVQGLARAGLATGKGQRPPGPGRVRAA----QARARRGGGARERPAEGARG-----P 76
Query: 69 RPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQG 128
R RG R A +P GP P L RR + PL AP+ AS G
Sbjct: 77 RAARGGA------------RAAPMPSSAPRGPTEPAL--RRPSSAERPLAQAPSSSASVG 122
Query: 129 RQPQLPADEKVGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQE 179
R P G P S A RGR G RP R+E
Sbjct: 123 RAP-----------------GAMASPSRSSEATGKPRGRDG----RPRREE 152
>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
Length = 316
Score = 40.4 bits (93), Expect = 0.001
Identities = 57/215 (26%), Positives = 75/215 (34%), Gaps = 42/215 (19%)
Query: 15 GPKEAEAAPGRGTRSPAWHDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRPGRGP 74
GP A G+RSP P R + RG GG R + G + + GRG
Sbjct: 64 GPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRG--RGRFPCAGSGGRGA 121
Query: 75 GSAGRCGPSEAR------HREARVPRRQEVGPR-TPRLL-----------------GRRS 110
S G PS R HR ++ R +E PR +P LL G R+
Sbjct: 122 RSRGCHSPSCCRSSSCAWHRWPQL-RGREADPRASPALLICIAPRPRPALPAALHIGARA 180
Query: 111 AHGPPPLRVAP----ARVASQGRQ-------PQLPADEKVGEGDWPGGWGEALRPRAGSA 159
G R P A A++GR+ P P + GD P G RP
Sbjct: 181 TAGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRG 240
Query: 160 AASTDRGRWGKLKLRPTRQETFRPAYLASAGRHSD 194
A GR G ++ P YL +S+
Sbjct: 241 AG----GRGGAQRIPPWPLRRLSLQYLGGVSEYSN 271
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 39.7 bits (91), Expect = 0.002
Identities = 52/182 (28%), Positives = 58/182 (31%), Gaps = 23/182 (12%)
Query: 1 MNEGSVRRGQESPFGPKEAEAA----PGRG------TRSPAWHDPRRRWLRFSARGVEAG 50
+ RRG P A A PG G RS AW P R R AG
Sbjct: 43 LGPAGARRGHSPPTVAPAASAGSQEHPGAGGPLCFPARSAAWGPPARASRAAGRRAGPAG 102
Query: 51 GARAVAKSGLLGTWRASPRPGRGPGS-------AGRCGPSEARHREARVPRRQEVGPRTP 103
G R SP PG GS G S A R VP R+ P
Sbjct: 103 PPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAASSAGTRS--VPARRLPPPCGG 160
Query: 104 RLLGRRSAHGPPPLRVAPARVASQGRQ----PQLPADEKVGEGDWPGGWGEALRPRAGSA 159
LG S P A R S R+ P A G WP G+ A P A ++
Sbjct: 161 TSLGAGSRALRRPGSAALPRSPSSSRRWAAMPGPGAPRPGAPGTWPVGFAVAAPPAAAAS 220
Query: 160 AA 161
A
Sbjct: 221 VA 222
>gi|222144283 hypothetical protein LOC65998 [Homo sapiens]
Length = 678
Score = 38.9 bits (89), Expect = 0.003
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 14/97 (14%)
Query: 13 PFGPKEAEAAPGRGTRSPAWHDPRRRWLRFSARGVEA------GGARAVAKSGLLGTWRA 66
P G + ++ GRG PA R R L + A GG + G LG+W +
Sbjct: 3 PGGDHRSRSSGGRGGPGPAVASARGRRLPPAGSSGSAEPEEDEGGQDLQLEGGALGSWGS 62
Query: 67 SPRP---GRGPGSAGR-----CGPSEARHREARVPRR 95
+P P RGP S+GR C +R ++R+P R
Sbjct: 63 APLPSSRARGPASSGRKYSDHCEARASRPGKSRIPGR 99
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 38.9 bits (89), Expect = 0.003
Identities = 55/206 (26%), Positives = 77/206 (37%), Gaps = 47/206 (22%)
Query: 8 RGQESPFGPKEAEAAPGRGTRSPAWHD------------------PRRRWLRFSARGVEA 49
RG+ESP P+ A ++ GRG R+ PRRR R
Sbjct: 359 RGKESP-SPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPR 417
Query: 50 GGARAVAK---SGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLL 106
G +R++++ S G+ R +P PG PGS G R +E R +P
Sbjct: 418 GSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAH 477
Query: 107 GRRS---------AHGPPPLRVAPARVASQGR------QPQLP----------ADEKVGE 141
GRR + GP P + +R S+ R +P P + +K GE
Sbjct: 478 GRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRDKDGE 537
Query: 142 GDWPGGWGEALRPRAGSAAASTDRGR 167
G EA R R S + S R R
Sbjct: 538 GRARHSEAEATRARRRSRSYSPIRKR 563
Score = 37.0 bits (84), Expect = 0.011
Identities = 36/120 (30%), Positives = 44/120 (36%), Gaps = 15/120 (12%)
Query: 65 RASPRPGRGPGSAGR----CGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPP---- 116
+ SP P P S GR G + R R R RR PR GRR PP
Sbjct: 361 KESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSS 420
Query: 117 ---LRVAPARVASQGRQPQLPADEKVGEGDWPGGWGEALR---PRAGSAAASTDRGRWGK 170
R + + GR P E G GG G+ + PRA A+ S G G+
Sbjct: 421 RSLSRARSSSDSGSGRGAPGPGPEP-GSERGHGGHGKRAKERPPRARPASTSPSPGAHGR 479
>gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [Homo
sapiens]
Length = 747
Score = 38.9 bits (89), Expect = 0.003
Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 8/112 (7%)
Query: 48 EAGGARAVAKSGLLGTWRASPRP----GRGPGSAGRCGPSEARHREARVPRRQEVGPRTP 103
EAGG A G G +A PRP G GPG E E + ++ P
Sbjct: 45 EAGGGGA----GPGGACKAEPRPVAASGGGPGGDEEEDEEEEEEDEEALLEDEDEEPPPA 100
Query: 104 RLLGRRSAHGPPPLRVAPARVASQGRQPQLPADEKVGEGDWPGGWGEALRPR 155
+ LG+ + P P A A++ + PA+ G G GG + L R
Sbjct: 101 QALGQAAQPPPEPPEAAAMEAAAEPDASEKPAEATAGSGGVNGGEEQGLGKR 152
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 38.5 bits (88), Expect = 0.004
Identities = 43/186 (23%), Positives = 65/186 (34%), Gaps = 26/186 (13%)
Query: 4 GSVRRGQESPFGPKEAEAAPGRGTRSPAWHDPRRRWLRFSARGVEAGGARAVAKSGLLGT 63
G+ RG G +EA+ G G + P W +PRRR + A GG++ + G
Sbjct: 377 GAKSRGGGDKKGLREAKRR-GDGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRRG---- 431
Query: 64 WRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPAR 123
P+ + G R G G + PR G+++
Sbjct: 432 ----PKAAKSRGGKSRSG-----------------GGKKPRRRGQKARQKAAEAGAESRG 470
Query: 124 VASQGRQPQLPADEKVGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRPTRQETFRP 183
QGRQ A K G G+ L R A A+ ++ K R +Q +
Sbjct: 471 DKKQGRQKASAAGTKSRGGGLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRGRKQPRRQK 530
Query: 184 AYLASA 189
+A A
Sbjct: 531 PAVAGA 536
Score = 30.4 bits (67), Expect = 1.0
Identities = 51/194 (26%), Positives = 74/194 (38%), Gaps = 44/194 (22%)
Query: 4 GSVRRGQESPFGPKEAEAAPGRGTRS-----PAW----HDPRRRW---LRFSARGVEAGG 51
G+ RRG + A+ GRG +S P W PRRR + +A G + GG
Sbjct: 285 GAKRRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGG 344
Query: 52 ARAVAKSGLLG--TWRASPRPGRGP--------GSAGRCGPSEARHREARVPRRQEVGPR 101
K+ ++G + + R G+ P G+ R G + REA +R+ G +
Sbjct: 345 G-GQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREA---KRRGDGRK 400
Query: 102 TPRLLG-RRSAHGPP-----------PLRVAPARVASQGRQPQLPADEKVGEGDWPGGWG 149
PR RR A P P R P S+G + G G P G
Sbjct: 401 KPRWQNPRRRAQKAPAAKPRGGGSKKPRRRGPKAAKSRG------GKSRSGGGKKPRRRG 454
Query: 150 EALRPRAGSAAAST 163
+ R +A A A +
Sbjct: 455 QKARQKAAEAGAES 468
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 38.5 bits (88), Expect = 0.004
Identities = 52/198 (26%), Positives = 69/198 (34%), Gaps = 38/198 (19%)
Query: 15 GPKEAEAAPGRGTRSPAWHDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRPGRGP 74
GP A G+RSP P R + RG GG R + G + + GRG
Sbjct: 64 GPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRG--RGRFPCAGSGGRGA 121
Query: 75 GSAGRCGPSEAR------HREARVPRRQEVGPRTPRLL-----------------GRRSA 111
S G PS R HR ++ R+ +P LL G R+
Sbjct: 122 RSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARAT 181
Query: 112 HGPPPLRVAP----ARVASQGRQ-------PQLPADEKVGEGDWPGGWGEALRPRAGSAA 160
G R P A A++GR+ P P + GD P G RP A
Sbjct: 182 AGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGA 241
Query: 161 ASTDRGRWGKLKLRPTRQ 178
RG ++ RP R+
Sbjct: 242 GG--RGGAQRIPPRPLRR 257
>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
Length = 304
Score = 38.5 bits (88), Expect = 0.004
Identities = 52/198 (26%), Positives = 69/198 (34%), Gaps = 38/198 (19%)
Query: 15 GPKEAEAAPGRGTRSPAWHDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRPGRGP 74
GP A G+RSP P R + RG GG R + G + + GRG
Sbjct: 64 GPAAGSAILRAGSRSPRGAGPGAAGPRAAGRGGAGGGGRCCTRG--RGRFPCAGSGGRGA 121
Query: 75 GSAGRCGPSEAR------HREARVPRRQEVGPRTPRLL-----------------GRRSA 111
S G PS R HR ++ R+ +P LL G R+
Sbjct: 122 RSRGCHSPSCCRSSSCAWHRWPQLRGREAEPRASPALLICIAPRPRPALPAALHIGARAT 181
Query: 112 HGPPPLRVAP----ARVASQGRQ-------PQLPADEKVGEGDWPGGWGEALRPRAGSAA 160
G R P A A++GR+ P P + GD P G RP A
Sbjct: 182 AGLAAKRAQPQLCSAGTAARGRRTRASPPTPPRPRPPGLRSGDVPRGGARVERPTGRRGA 241
Query: 161 ASTDRGRWGKLKLRPTRQ 178
RG ++ RP R+
Sbjct: 242 GG--RGGAQRIPPRPLRR 257
>gi|239754797 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 37.7 bits (86), Expect = 0.006
Identities = 37/122 (30%), Positives = 47/122 (38%), Gaps = 14/122 (11%)
Query: 55 VAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGP 114
V +GL R++ PGRG G G + V +G R PR G R A P
Sbjct: 7 VGAAGLGAAHRSTAAPGRGVSVRGTVGRQQGGPGHGNVDHLPNLG-RQPRGAGSRGASAP 65
Query: 115 PPLR--VAPARVASQGRQPQLPADEKVGEGDWP---------GGWGEALRPRAGSAAAST 163
+R AP V G + + EG+ P GG E RP G+AAA
Sbjct: 66 RAVRTGAAPEVVVQSGHRSHASKRRFLEEGEAPARRLSERRRGGGKEESRP--GTAAAPG 123
Query: 164 DR 165
R
Sbjct: 124 GR 125
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 37.7 bits (86), Expect = 0.006
Identities = 41/121 (33%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 65 RASPRPGRGPGS-AGRCGPSEARHREARVPRRQEV------GPRTPRLLGRRSAHGPPPL 117
R + +PG G GS A R GP E R R+ + R++ G R GRR
Sbjct: 763 RGAGQPGPGSGSGAERAGP-ERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGRR 821
Query: 118 RVAPARVASQGRQPQLPADEKVGEGDWPGGWGEALRPRAGS-AAASTDRGRWGKLKLRPT 176
R A SQG + + + GE P A RP S AAA + RG WG RP+
Sbjct: 822 R---AGATSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAARSARGSWGLRASRPS 878
Query: 177 R 177
R
Sbjct: 879 R 879
>gi|239743415 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 37.7 bits (86), Expect = 0.006
Identities = 37/122 (30%), Positives = 47/122 (38%), Gaps = 14/122 (11%)
Query: 55 VAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGP 114
V +GL R++ PGRG G G + V +G R PR G R A P
Sbjct: 7 VGAAGLGAAHRSTAAPGRGVSVRGTVGRQQGGPGHGNVDHLPNLG-RQPRGAGSRGASAP 65
Query: 115 PPLR--VAPARVASQGRQPQLPADEKVGEGDWP---------GGWGEALRPRAGSAAAST 163
+R AP V G + + EG+ P GG E RP G+AAA
Sbjct: 66 RAVRTGAAPEVVVQSGHRSHASKRRFLEEGEAPARRLSERRRGGGKEESRP--GTAAAPG 123
Query: 164 DR 165
R
Sbjct: 124 GR 125
>gi|26787962 advanced glycosylation end product-specific receptor
isoform 2 precursor [Homo sapiens]
Length = 342
Score = 37.4 bits (85), Expect = 0.008
Identities = 35/101 (34%), Positives = 42/101 (41%), Gaps = 16/101 (15%)
Query: 16 PKEAEAAPGRGTRS-----PAWHDPRRRWLRFSARGVEAGGARAV---AKSGLLGTWRAS 67
P+ APG GT + PA P+ W++ +E G R A L G RA
Sbjct: 230 PEGGAVAPG-GTVTLTCEVPAQPSPQIHWMK-DVSDLERGAGRTRRGGANCRLCGRIRAG 287
Query: 68 PRPGRGPGSAGRCGPSEARH-----REARVPRRQEVGPRTP 103
GPG GR G S H +A PRR E GPR P
Sbjct: 288 -NSSPGPGDPGRPGDSRPAHWGHLVAKAATPRRGEEGPRKP 327
>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
sapiens]
Length = 398
Score = 37.0 bits (84), Expect = 0.011
Identities = 38/104 (36%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 21 AAPGRGTRSPAWHDPRRRWLRFSARGVEAG-GARAVAKSGLLGTWRASPRPGRGPGSAGR 79
AAPGR R P R + GV +G G RA A LG S R G GP +
Sbjct: 129 AAPGRKLRGEPKTPPGRSG---PSGGVRSGAGHRAAAAEHQLGAG-FSVRNGPGPPARLP 184
Query: 80 CGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPAR 123
P R AR PR PRTP S PPPL + +R
Sbjct: 185 PAPPGPLLRPARPPRPYFPRPRTPPTCEPPSRKLPPPLPLCRSR 228
>gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens]
Length = 496
Score = 37.0 bits (84), Expect = 0.011
Identities = 43/135 (31%), Positives = 52/135 (38%), Gaps = 20/135 (14%)
Query: 49 AGGARAVAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGR 108
+GG + G LG+ RA P P G G CG SE R R P R VG R + GR
Sbjct: 27 SGGGGGGDEDGSLGS-RAEPAPRAREG--GGCGRSEVRPVAPRRP-RDAVGQRGAQGAGR 82
Query: 109 RSAHGPPPLRVAP---------ARVASQGRQPQLPADE-------KVGEGDWPGGWGEAL 152
R G PP ++ VA G LP + E D G +A
Sbjct: 83 RRRAGGPPRPMSEPGAGAGSSLLDVAEPGGPGWLPESDCETVTCCLFSERDAAGAPRDAS 142
Query: 153 RPRAGSAAASTDRGR 167
P AG+A GR
Sbjct: 143 DPLAGAALEPAGGGR 157
>gi|115511036 alpha-kinase 3 [Homo sapiens]
Length = 1907
Score = 37.0 bits (84), Expect = 0.011
Identities = 47/162 (29%), Positives = 55/162 (33%), Gaps = 37/162 (22%)
Query: 20 EAAPGRGTRSPAWHD--------PR-------RRWLRFSARGVEAGGARAVAKSGLLGTW 64
E PG T+ P HD PR RR+ R R GA A GTW
Sbjct: 74 EPGPGSSTKGPVLHDQDTRCAFLPRPPGPLQTRRYCRHQGRQGSGLGAGPGA-----GTW 128
Query: 65 RASPRPGRGPGSAGRCGPSEARHR--EARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPA 122
+P P GR P E + + AR P G R PR + G P
Sbjct: 129 APAPPGVSKPRCPGRARPGEGQQQVTTARPPAINR-GARQPRAGAAAAGRG-------PG 180
Query: 123 RVASQGRQPQLPADEKVGEGDWPG-------GWGEALRPRAG 157
A + + A VGEG G GWG R AG
Sbjct: 181 AGAWRTGEAAASAGPAVGEGGAMGSRRAPSRGWGAGGRSGAG 222
Score = 32.0 bits (71), Expect = 0.35
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 13/66 (19%)
Query: 16 PKEAEAAPGRGTRSPAWHDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRPGRGPG 75
P+ AA GRG + AW A AV + G +G+ RA P RG G
Sbjct: 168 PRAGAAAAGRGPGAGAWRTGE----------AAASAGPAVGEGGAMGSRRA---PSRGWG 214
Query: 76 SAGRCG 81
+ GR G
Sbjct: 215 AGGRSG 220
>gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo
sapiens]
Length = 946
Score = 37.0 bits (84), Expect = 0.011
Identities = 55/189 (29%), Positives = 72/189 (38%), Gaps = 46/189 (24%)
Query: 8 RGQESPFGPKEAEAAPGRGTRSPA-WHDPRRRWLRFSARGVEAGGARAVAKSGLLGTWRA 66
RG F P AE+ RSP W RRR S G + G+ +V+ G R
Sbjct: 52 RGASFLFPP--AESLSPEEPRSPGGWRSGRRRLNSSSGSGSGSSGS-SVSSPSWAGRLRG 108
Query: 67 SPRPGRGPGSAGRCGPSEARHREARVPRR--------QEVG---------------PRTP 103
+ G+ GP EA+ R+ R+ +R Q+VG PR+P
Sbjct: 109 DRQQVVAAGTLSPPGPEEAK-RKLRILQRELQNVQVNQKVGMFEAHIQAQSSAIQAPRSP 167
Query: 104 RLLGRRSAHGPPPLRVA---PARVASQGRQPQLPADEKVGEGDWPGGWGEALRPRAGSAA 160
R LGR + P P R + P RV QG + E WGE +G
Sbjct: 168 R-LGRARSPSPCPFRSSSQPPGRVLVQGAR---------SEERRTKSWGEQCPETSG--- 214
Query: 161 ASTDRGRWG 169
TD GR G
Sbjct: 215 --TDSGRKG 221
>gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo
sapiens]
Length = 828
Score = 36.6 bits (83), Expect = 0.014
Identities = 39/119 (32%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 68 PRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGP----PPLRVAPAR 123
PR R P +A SEA AR+ R VG RLL R A GP LR+ +R
Sbjct: 361 PRDPRSPSAAS---VSEASPSRARLSREARVGRGVDRLLERVKACGPFWELAELRLCSSR 417
Query: 124 VASQG-------RQPQLPADEKVGEGDWPGGWGEALRPRAGSAAASTDRGRWGKLKLRP 175
A G R+P PA G W L G + RG WG + L P
Sbjct: 418 AAGDGGGAAGFRREPSRPAPVASGV-SWLEAITSELAGGDGDISFCARRG-WGVVGLGP 474
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 36.6 bits (83), Expect = 0.014
Identities = 38/132 (28%), Positives = 54/132 (40%), Gaps = 5/132 (3%)
Query: 35 PRRRWLRFSARGVEAGGARAVAKSGLLGTWRASPRPGRGPGSAGRCGPSEARHREARVPR 94
PR +R +A G + + +G G A+P G PG+A P+ P+
Sbjct: 45 PRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEG-APGAAPEPPPAGRARPGGGGPQ 103
Query: 95 RQEVGPRTPRLLGRRSAHGPPPLRVAPARVASQGRQPQLPADEKVGEGDWPGGWGEALRP 154
R GP +PR + PP ++ P S G +PA V G P G A +P
Sbjct: 104 RP--GPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPA-KP 160
Query: 155 RAGSAAASTDRG 166
AG AA + G
Sbjct: 161 -AGPAALAARAG 171
>gi|169217659 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 36.2 bits (82), Expect = 0.018
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 67 SPRPGRGPGSAGRCGPSEARHREARVPRRQEVGPRTPRLLGRRSAHGPPPLRVAPA--RV 124
SP PG PG+A P + + A V P L R+A GPPPL+ P +V
Sbjct: 346 SPYPGPAPGTANLDSPQDLPQQSAPRTHLLTVSPGPAPSLPPRTALGPPPLQSRPGFLQV 405
Query: 125 ASQ--GRQPQLPADEKVGEGDWPGGW 148
+ Q G + +E G W G+
Sbjct: 406 SRQRCGSAHVMAPEENAGTELWLQGF 431
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,106,632
Number of Sequences: 37866
Number of extensions: 610148
Number of successful extensions: 3012
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 438
Number of HSP's that attempted gapping in prelim test: 2668
Number of HSP's gapped (non-prelim): 738
length of query: 196
length of database: 18,247,518
effective HSP length: 97
effective length of query: 99
effective length of database: 14,574,516
effective search space: 1442877084
effective search space used: 1442877084
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.