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Search of human proteins with 239741968
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741968 PREDICTED: hypothetical protein [Homo sapiens]
(263 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239741968 PREDICTED: hypothetical protein [Homo sapiens] 536 e-153
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 53 2e-07
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 53 2e-07
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 47 1e-05
gi|239751929 PREDICTED: hypothetical protein [Homo sapiens] 45 5e-05
gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo ... 45 5e-05
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 45 8e-05
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ... 45 8e-05
gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo ... 44 1e-04
gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo ... 44 1e-04
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 44 2e-04
gi|239754516 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|224465238 hypothetical protein LOC283999 [Homo sapiens] 42 5e-04
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 42 5e-04
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 40 0.002
gi|169168202 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 40 0.002
gi|169167967 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239745480 PREDICTED: hypothetical protein XP_002343504 [Homo ... 40 0.002
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 40 0.002
gi|169167681 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239754911 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo ... 40 0.002
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239749451 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo ... 40 0.002
>gi|239741968 PREDICTED: hypothetical protein [Homo sapiens]
Length = 263
Score = 536 bits (1382), Expect = e-153
Identities = 263/263 (100%), Positives = 263/263 (100%)
Query: 1 MLTISRAGRERREAEMDRERMLSRLAIRGHTGDLKEFVQPGSIGQVWWCVHTQTENEWHL 60
MLTISRAGRERREAEMDRERMLSRLAIRGHTGDLKEFVQPGSIGQVWWCVHTQTENEWHL
Sbjct: 1 MLTISRAGRERREAEMDRERMLSRLAIRGHTGDLKEFVQPGSIGQVWWCVHTQTENEWHL 60
Query: 61 QIPHPDRSPLLYQPTPPRSVCVRKGARKTVEALRPREGSPAAPIGDEEWVLRRIWRRTGA 120
QIPHPDRSPLLYQPTPPRSVCVRKGARKTVEALRPREGSPAAPIGDEEWVLRRIWRRTGA
Sbjct: 61 QIPHPDRSPLLYQPTPPRSVCVRKGARKTVEALRPREGSPAAPIGDEEWVLRRIWRRTGA 120
Query: 121 AGASPAGARSHPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAARARPASPAP 180
AGASPAGARSHPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAARARPASPAP
Sbjct: 121 AGASPAGARSHPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAARARPASPAP 180
Query: 181 ARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARRPGCGGRRAGGAR 240
ARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARRPGCGGRRAGGAR
Sbjct: 181 ARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARRPGCGGRRAGGAR 240
Query: 241 AGQGAHTGVGAEDRTLSLEGAPR 263
AGQGAHTGVGAEDRTLSLEGAPR
Sbjct: 241 AGQGAHTGVGAEDRTLSLEGAPR 263
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 53.1 bits (126), Expect = 2e-07
Identities = 54/159 (33%), Positives = 58/159 (36%), Gaps = 22/159 (13%)
Query: 120 AAGASPAGA-----RSHPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAARAR 174
AAG AGA R RA RR RA A G G VR G GAA +
Sbjct: 834 AAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQ 893
Query: 175 PA------SPAPARLLPLAVGASAAAGDTRRTEARAEPS-------PSRRRRRRCCAPLP 221
A APA A G AA G R A+ PS RR RRR L
Sbjct: 894 RAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHRPGARGRRSRRRAAVALA 953
Query: 222 GSLPARRPGCGGRRAG----GARAGQGAHTGVGAEDRTL 256
G R G RR G GARA A G D+ +
Sbjct: 954 GGAHPARAALGRRRGGGQAVGARAAHQARLAGGQVDQVV 992
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 53.1 bits (126), Expect = 2e-07
Identities = 54/159 (33%), Positives = 58/159 (36%), Gaps = 22/159 (13%)
Query: 120 AAGASPAGA-----RSHPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAARAR 174
AAG AGA R RA RR RA A G G VR G GAA +
Sbjct: 834 AAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQ 893
Query: 175 PA------SPAPARLLPLAVGASAAAGDTRRTEARAEPS-------PSRRRRRRCCAPLP 221
A APA A G AA G R A+ PS RR RRR L
Sbjct: 894 RAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHRPGARGRRSRRRAAVALA 953
Query: 222 GSLPARRPGCGGRRAG----GARAGQGAHTGVGAEDRTL 256
G R G RR G GARA A G D+ +
Sbjct: 954 GGAHPARAALGRRRGGGQAVGARAAHQARLAGGQVDQVV 992
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 47.4 bits (111), Expect = 1e-05
Identities = 61/190 (32%), Positives = 68/190 (35%), Gaps = 53/190 (27%)
Query: 59 HLQIPHPDRSPLLYQPTPPRSVCVRKGARKTVEALRPREGSPAAPIGDEEWVLRRIWRRT 118
H Q+ R+PL++ P G R P PA P EE
Sbjct: 18 HSQVSLARRAPLMFGP----------GLRD------PPPPRPAPPRPGEE---------P 52
Query: 119 GAAGASPAGARSHPGRASRRGASDRARC----ARGLGGPRVAAASELVRRGLASGAARAR 174
G P AR+HPG S RARC A GL GP AA R+ GAA AR
Sbjct: 53 GNRHPPPPAARTHPG-------SCRARCPSPAAGGLRGPWTAAPG---RQRADEGAAAAR 102
Query: 175 PASPAP-ARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCC-------------APL 220
P AR LP + A A D R P P R R AP
Sbjct: 103 PERQRVWARRLPGSAAAPAPGRDALRLPPPPPPPPERPRLPPAGLAGGPADSAPPSPAPA 162
Query: 221 PGSLPARRPG 230
P S PA RPG
Sbjct: 163 PRSRPAPRPG 172
>gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 382
Score = 45.4 bits (106), Expect = 5e-05
Identities = 57/183 (31%), Positives = 70/183 (38%), Gaps = 21/183 (11%)
Query: 67 RSPLLYQPTPPRSVCVRKGARKTVEALRPREGSPA-APIGDEEWVLRRIWRRTGAAGASP 125
R+ + PTPPRS L P SP AP+ + TG SP
Sbjct: 111 RAARVSPPTPPRS------------GLDPAVPSPTPAPLARCRQTRAGLRLSTGGR-LSP 157
Query: 126 AGARSHPGRASRRGASDRARCA-RGLGGPRVAAASELVR-RGLASGAAR----ARPASPA 179
R+ G R G + A RG GG RV +R RG G AR AR
Sbjct: 158 PLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRGEE 217
Query: 180 PARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARRPGCGGRRAGGA 239
R+ A A RR +AE + +R R C P PG G GG+RAGG
Sbjct: 218 DLRVQDSCPQAGCRAMGQRRV-LKAEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGGW 276
Query: 240 RAG 242
+ G
Sbjct: 277 QPG 279
Score = 32.0 bits (71), Expect = 0.57
Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 181 ARLLPLAVGASAAAGDTRRTEARAEPSPS------RRRRRRCCAPLPGSLPARRPGCGGR 234
AR+ A+ A+A G R RA P+ RRRRR LP +L P R
Sbjct: 44 ARVDAAALRAAARPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSAR 103
Query: 235 RAGGARA 241
GGARA
Sbjct: 104 PGGGARA 110
>gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo
sapiens]
Length = 382
Score = 45.4 bits (106), Expect = 5e-05
Identities = 57/183 (31%), Positives = 70/183 (38%), Gaps = 21/183 (11%)
Query: 67 RSPLLYQPTPPRSVCVRKGARKTVEALRPREGSPA-APIGDEEWVLRRIWRRTGAAGASP 125
R+ + PTPPRS L P SP AP+ + TG SP
Sbjct: 111 RAARVSPPTPPRS------------GLDPAVPSPTPAPLARCRQTRAGLRLSTGGR-LSP 157
Query: 126 AGARSHPGRASRRGASDRARCA-RGLGGPRVAAASELVR-RGLASGAAR----ARPASPA 179
R+ G R G + A RG GG RV +R RG G AR AR
Sbjct: 158 PLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRGEE 217
Query: 180 PARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARRPGCGGRRAGGA 239
R+ A A RR +AE + +R R C P PG G GG+RAGG
Sbjct: 218 DLRVQDSCPQAGCRAMGQRRV-LKAEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGGW 276
Query: 240 RAG 242
+ G
Sbjct: 277 QPG 279
Score = 32.0 bits (71), Expect = 0.57
Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 181 ARLLPLAVGASAAAGDTRRTEARAEPSPS------RRRRRRCCAPLPGSLPARRPGCGGR 234
AR+ A+ A+A G R RA P+ RRRRR LP +L P R
Sbjct: 44 ARVDAAALRAAARPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSAR 103
Query: 235 RAGGARA 241
GGARA
Sbjct: 104 PGGGARA 110
>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
Length = 459
Score = 44.7 bits (104), Expect = 8e-05
Identities = 48/150 (32%), Positives = 57/150 (38%), Gaps = 12/150 (8%)
Query: 121 AGASPAGARSHPGRASRRGASDRARCARGLGGPR-VAAASELVRRGLASGAARARPASPA 179
A SPA A G S G RG G R V AA E + A P S +
Sbjct: 118 AQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTS 177
Query: 180 PARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARRPGC-------G 232
A +P A +S A R A +PSR + P P +RRPG
Sbjct: 178 SATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTR 237
Query: 233 GRRAGGARAGQGAHTGVGAEDRTLSLEGAP 262
R GG+ A A +G D TLSLE P
Sbjct: 238 QRELGGSAAPSVAFSG----DVTLSLERGP 263
>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
sapiens]
Length = 459
Score = 44.7 bits (104), Expect = 8e-05
Identities = 48/150 (32%), Positives = 57/150 (38%), Gaps = 12/150 (8%)
Query: 121 AGASPAGARSHPGRASRRGASDRARCARGLGGPR-VAAASELVRRGLASGAARARPASPA 179
A SPA A G S G RG G R V AA E + A P S +
Sbjct: 118 AQRSPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTS 177
Query: 180 PARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARRPGC-------G 232
A +P A +S A R A +PSR + P P +RRPG
Sbjct: 178 SATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTR 237
Query: 233 GRRAGGARAGQGAHTGVGAEDRTLSLEGAP 262
R GG+ A A +G D TLSLE P
Sbjct: 238 QRELGGSAAPSVAFSG----DVTLSLERGP 263
>gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo
sapiens]
Length = 585
Score = 44.3 bits (103), Expect = 1e-04
Identities = 57/188 (30%), Positives = 68/188 (36%), Gaps = 54/188 (28%)
Query: 67 RSPLLYQPTPPRS-VCVRKGARKTVEALRPREGSPAAPIGDEEWVLRRIWRRTGAAGASP 125
R P +P PPR C ALRPR AA RR++ R GAA P
Sbjct: 355 RGPPSQEPGPPRPWPC----------ALRPRPRLRAALPS------RRLFSR-GAAQQLP 397
Query: 126 AGARSHPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAARARPASPAPARLLP 185
+ HPGR + R + AR P P +L
Sbjct: 398 CCYKLHPGR-------------------------HVPLRPFKEKHSEARRRLPEPRQLHL 432
Query: 186 LAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLP----------GSLPARRP-GCGGR 234
VGA++ RR R EP P+RR R P GS PA+ P G GR
Sbjct: 433 QPVGANSVERAARRRRTRPEPGPARRGARAEPPGPPTLQDPPASHLGSSPAQAPSGEAGR 492
Query: 235 RAGGARAG 242
RAGG G
Sbjct: 493 RAGGGAVG 500
>gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo
sapiens]
Length = 585
Score = 44.3 bits (103), Expect = 1e-04
Identities = 57/188 (30%), Positives = 68/188 (36%), Gaps = 54/188 (28%)
Query: 67 RSPLLYQPTPPRS-VCVRKGARKTVEALRPREGSPAAPIGDEEWVLRRIWRRTGAAGASP 125
R P +P PPR C ALRPR AA RR++ R GAA P
Sbjct: 355 RGPPSQEPGPPRPWPC----------ALRPRPRLRAALPS------RRLFSR-GAAQQLP 397
Query: 126 AGARSHPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAARARPASPAPARLLP 185
+ HPGR + R + AR P P +L
Sbjct: 398 CCYKLHPGR-------------------------HVPLRPFKEKHSEARRRLPEPRQLHL 432
Query: 186 LAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLP----------GSLPARRP-GCGGR 234
VGA++ RR R EP P+RR R P GS PA+ P G GR
Sbjct: 433 QPVGANSVERAARRRRTRPEPGPARRGARAEPPGPPTLQDPPASHLGSSPAQAPSGEAGR 492
Query: 235 RAGGARAG 242
RAGG G
Sbjct: 493 RAGGGAVG 500
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 43.9 bits (102), Expect = 1e-04
Identities = 58/205 (28%), Positives = 74/205 (36%), Gaps = 35/205 (17%)
Query: 78 RSVCVRKGARKT----VEALRPREGSPAAPI-GDEEWVLRRIWRRTGAAGAS--PAGARS 130
R V KGA +T E PR G P G E W R R G++GA P +R+
Sbjct: 330 RKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWA--RAERHGGSSGARTLPTPSRA 387
Query: 131 HPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAARARPASPAPAR---LLPLA 187
PG+ + RG++ AR G GG + ++LV G SG + R P
Sbjct: 388 RPGKPAPRGSAPPARLRGGGGG---SGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRP 444
Query: 188 VGASAAAGDTRRTEARAEPSPSRRRRRRCCAP-----------------LPG---SLPAR 227
VG R + A SP R R P LPG P+
Sbjct: 445 VGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSP 504
Query: 228 RPGCGGRRAGGARAGQGAHTGVGAE 252
GG+R G G G AE
Sbjct: 505 AHDWGGQRCEGCGGGSQPFAGRRAE 529
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 43.9 bits (102), Expect = 1e-04
Identities = 58/205 (28%), Positives = 74/205 (36%), Gaps = 35/205 (17%)
Query: 78 RSVCVRKGARKT----VEALRPREGSPAAPI-GDEEWVLRRIWRRTGAAGAS--PAGARS 130
R V KGA +T E PR G P G E W R R G++GA P +R+
Sbjct: 330 RKPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWA--RAERHGGSSGARTLPTPSRA 387
Query: 131 HPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAARARPASPAPAR---LLPLA 187
PG+ + RG++ AR G GG + ++LV G SG + R P
Sbjct: 388 RPGKPAPRGSAPPARLRGGGGG---SGLTQLVGSGRGSGVTHSVGTHALATRRGSRAPRP 444
Query: 188 VGASAAAGDTRRTEARAEPSPSRRRRRRCCAP-----------------LPG---SLPAR 227
VG R + A SP R R P LPG P+
Sbjct: 445 VGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSP 504
Query: 228 RPGCGGRRAGGARAGQGAHTGVGAE 252
GG+R G G G AE
Sbjct: 505 AHDWGGQRCEGCGGGSQPFAGRRAE 529
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 43.5 bits (101), Expect = 2e-04
Identities = 55/173 (31%), Positives = 64/173 (36%), Gaps = 34/173 (19%)
Query: 58 WHLQIPHPDRSPLLYQPTPPRSVCVRKGARKTVEALRPREGSPAAPIGDEEWVLRRIWRR 117
W ++ H R P S C +K R + R R SP + R+
Sbjct: 1286 WDIKREHDVRKP------KELSACGQKKQRLGEQ--RERSASP------QRAARPRLEEA 1331
Query: 118 TGAAGASPAGARSHPGRASRRGASDRARCARGLG--GPRVAAASELVRRGLASGAARARP 175
G G AG + RA A+D A AR G PR AA SEL RR GAA P
Sbjct: 1332 PGGQGRPEAGRPASEARAPGLAAADAADAARAGGKEAPRAAAGSELCRRE-GPGAA---P 1387
Query: 176 ASPAPARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARR 228
A P G S A R ARA P P R PG PAR+
Sbjct: 1388 AFAGPGG------GGSGALEAEGRAGARAGPRPGPRP--------PGGAPARK 1426
>gi|239754516 PREDICTED: hypothetical protein [Homo sapiens]
Length = 334
Score = 43.1 bits (100), Expect = 2e-04
Identities = 60/216 (27%), Positives = 73/216 (33%), Gaps = 43/216 (19%)
Query: 72 YQPTPPRSVCVRKGARKTVEALRPREGSPAAPIGDEEWVLRR------------IWRRTG 119
++P P + +R + + LR AA + D E LRR + R G
Sbjct: 89 HRPVPAAAAILRAAVHRVLRVLRA-----AAAVRDAERGLRREGPRRHAPPRKQLRGRRG 143
Query: 120 AAGASPAGARSHPGRASRRGASDRARCA-----------RGLGGPRVAAASELVRRGLAS 168
AAG AG H GR RG R G P A + R+
Sbjct: 144 AAGLVSAG---HLGREPPRGGGPRPPALVPVPLATPLLLEGRSEPSTRACAVSGRQAALL 200
Query: 169 GAARARPASPAPARLLPLA--VGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPA 226
GA RPA AR P A GA+A A R A P + RR PA
Sbjct: 201 GA-HVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRR---------PA 250
Query: 227 RRPGCGGRRAGGARAGQGAHTGVGAEDRTLSLEGAP 262
R G RRA G+ E R EG P
Sbjct: 251 PRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVP 286
>gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
Length = 394
Score = 42.0 bits (97), Expect = 5e-04
Identities = 57/203 (28%), Positives = 73/203 (35%), Gaps = 22/203 (10%)
Query: 65 PDRSPLLYQPTPPRSVCVRKGARKTVEALRPREGSPAAPIGDEEWVLR-RIWRRTGAAGA 123
P S L+ P + +R E +G A+P G +W R R +
Sbjct: 49 PSSSQALHSPARQVHLVWLLRSRGFREIKERAQGPGASPWGRWDWSPSPRFAARLSTSSP 108
Query: 124 SPAGARSHPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAARARPASPAPARL 183
P G P +RG D G G + +++RR +G RARP P P
Sbjct: 109 FPQGRAQRP----QRGGVDLPATPGGPRGQCAGRSGDVLRR---AGRRRARPP-PVPRLP 160
Query: 184 LPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARRPGCGGR-RAGGARAG 242
P A RR A P PS R P + P RRPGC + RA G R
Sbjct: 161 APRA---------PRRPRGPATPDPSPPAGRPH-GPAGRAAPGRRPGCTAQLRAPGRRGR 210
Query: 243 QG--AHTGVGAEDRTLSLEGAPR 263
Q H G G + L A R
Sbjct: 211 QRLLVHPGGGGRRQWQRLARARR 233
>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 814
Score = 42.0 bits (97), Expect = 5e-04
Identities = 55/195 (28%), Positives = 67/195 (34%), Gaps = 31/195 (15%)
Query: 62 IPHPDRSPLLYQPTPPRSVCVRKGARKTVEALRP----REGSPAAPIGDEEWVLRRIWRR 117
+P P P++ P P G +E + P GSP + I
Sbjct: 108 LPTPTPKPIVTPPGPAA------GESSAMEGMFPVHWAGRGSPPPAL---------ISPA 152
Query: 118 TGAAGASPAGARSHPGRA--------SRRGASDRARCARGLGGPRVAAASELVRRGLASG 169
+ A SP PG+ S RG + A A L G R + V G S
Sbjct: 153 SPATQRSPGEGAQQPGKCLVCPSSGNSERGTNTSAELALALAGKREMQGCQRVCSGDRSV 212
Query: 170 AARARPASPAPARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARRP 229
RA P APAR P A A TR A RRRR R + PGS P
Sbjct: 213 RRRAHPPVHAPARSHPEEARALALPAPTRVHLRLAARCVGRRRRER--SDPPGSY--HDP 268
Query: 230 GCGGRRAGGARAGQG 244
G R G G+G
Sbjct: 269 ALGLRTPGPILEGRG 283
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 41.2 bits (95), Expect = 0.001
Identities = 56/196 (28%), Positives = 74/196 (37%), Gaps = 27/196 (13%)
Query: 73 QPTPPRSVCV--RKGAR----KTVEALRPREGSPAAPIGDEEWVLRRIWRRTGAAGASPA 126
+PTPP + R G + A P GS P G E ++ W + + +P
Sbjct: 153 EPTPPGRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPE---QQAWEQRSSHFLAPE 209
Query: 127 GA------RSHPGRASR---RGASDRARCARGLGGPRVAAAS------ELVRRGLASGAA 171
G+ + P RA R R + A +RG GG AA L R LAS +
Sbjct: 210 GSVASLLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVS 269
Query: 172 RARPASPAPARLLPLAVGASAAAGDTRRTEARA---EPSPSRRRRRRCCAPLPGSLPARR 228
A + +P L P AS +RA P P R RRR +P LP R
Sbjct: 270 LAASLARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPR 329
Query: 229 PGCGGRRAGGARAGQG 244
G GAR +G
Sbjct: 330 SLSRGGEVVGARRRRG 345
Score = 28.9 bits (63), Expect = 4.8
Identities = 54/195 (27%), Positives = 65/195 (33%), Gaps = 28/195 (14%)
Query: 65 PDRSPLLYQPTPPRSVCVRKGARKTVEALRPRE---GSPAAPIGDEEWVLRRIWRRTGAA 121
P P L +PPR G+R + PR + +P G + R + R
Sbjct: 279 PPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSR----- 333
Query: 122 GASPAGARSHPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAARA-RPASPAP 180
G GAR G RR R CA LG P + A R AAR R P
Sbjct: 334 GGEVVGARRRRGGEERRVRGRRQGCA--LGSPPIPAGPAAPGRAGERRAARQWRKRGGGP 391
Query: 181 ARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLP----GSLPARRPGCGGRR- 235
G S G + R +P R C P P G P R G R
Sbjct: 392 --------GVSPREG-AQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRL 442
Query: 236 -AGGARAGQ--GAHT 247
A A A + G HT
Sbjct: 443 SAPSAEAEEVPGGHT 457
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 41.2 bits (95), Expect = 0.001
Identities = 56/196 (28%), Positives = 74/196 (37%), Gaps = 27/196 (13%)
Query: 73 QPTPPRSVCV--RKGAR----KTVEALRPREGSPAAPIGDEEWVLRRIWRRTGAAGASPA 126
+PTPP + R G + A P GS P G E ++ W + + +P
Sbjct: 153 EPTPPGRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPE---QQAWEQRSSHFLAPE 209
Query: 127 GA------RSHPGRASR---RGASDRARCARGLGGPRVAAAS------ELVRRGLASGAA 171
G+ + P RA R R + A +RG GG AA L R LAS +
Sbjct: 210 GSVASLLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVS 269
Query: 172 RARPASPAPARLLPLAVGASAAAGDTRRTEARA---EPSPSRRRRRRCCAPLPGSLPARR 228
A + +P L P AS +RA P P R RRR +P LP R
Sbjct: 270 LAASLARSPPPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPR 329
Query: 229 PGCGGRRAGGARAGQG 244
G GAR +G
Sbjct: 330 SLSRGGEVVGARRRRG 345
Score = 28.9 bits (63), Expect = 4.8
Identities = 54/195 (27%), Positives = 65/195 (33%), Gaps = 28/195 (14%)
Query: 65 PDRSPLLYQPTPPRSVCVRKGARKTVEALRPRE---GSPAAPIGDEEWVLRRIWRRTGAA 121
P P L +PPR G+R + PR + +P G + R + R
Sbjct: 279 PPLQPRLGSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSR----- 333
Query: 122 GASPAGARSHPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAARA-RPASPAP 180
G GAR G RR R CA LG P + A R AAR R P
Sbjct: 334 GGEVVGARRRRGGEERRVRGRRQGCA--LGSPPIPAGPAAPGRAGERRAARQWRKRGGGP 391
Query: 181 ARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLP----GSLPARRPGCGGRR- 235
G S G + R +P R C P P G P R G R
Sbjct: 392 --------GVSPREG-AQGEGVRGGVTPRARGSSTCLRPSPATWQGGAPYRAIFAAGPRL 442
Query: 236 -AGGARAGQ--GAHT 247
A A A + G HT
Sbjct: 443 SAPSAEAEEVPGGHT 457
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 40.4 bits (93), Expect = 0.002
Identities = 47/145 (32%), Positives = 53/145 (36%), Gaps = 23/145 (15%)
Query: 119 GAAG-ASPAGARSHPGRASRRGASDRARCARGLGGPR-----VAAASELVRRGLASGAAR 172
GA G A PAG + PG GA + RGL G R A G A
Sbjct: 275 GAKGDAGPAGPKGEPGSPGENGAPGQMG-PRGLPGERGRPGAPGPAGARGNDGATGAAGP 333
Query: 173 ARPASPAPARLLPLAVGASAAAG--DTRRTE----ARAEPSPSRRRRRRCCAPLPGSLPA 226
P PA P AVGA AG R +E R EP P P + PA
Sbjct: 334 PGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPP--------GPAGAAGPA 385
Query: 227 RRPGCGGRRAGGARAGQGAHTGVGA 251
PG G+ GA+ GA GA
Sbjct: 386 GNPGADGQ--PGAKGANGAPGIAGA 408
Score = 29.3 bits (64), Expect = 3.7
Identities = 39/159 (24%), Positives = 52/159 (32%), Gaps = 27/159 (16%)
Query: 119 GAAGAS-PAGARSHPGRASRRGASDRA--------RCARGLGGPRVAAASELVRRGLASG 169
G AG PAG R PG A +G+ A A+GL G + +
Sbjct: 500 GVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPA 559
Query: 170 AARARPASPAPARLLPLA-----VGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSL 224
RP P P A G AAG+ + R P P PG++
Sbjct: 560 GQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGP------------PGAV 607
Query: 225 -PARRPGCGGRRAGGARAGQGAHTGVGAEDRTLSLEGAP 262
PA + G G + AG G + +G P
Sbjct: 608 GPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLP 646
Score = 28.9 bits (63), Expect = 4.8
Identities = 37/132 (28%), Positives = 43/132 (32%), Gaps = 4/132 (3%)
Query: 119 GAAG-ASPAGARSHPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAARARPAS 177
GA G A P GA PG A R G + A G GP A E + RP
Sbjct: 863 GARGSAGPPGATGFPGAAGRVGPPGPSGNA-GPPGPPGPAGKEGGKGPRGETGPAGRPGE 921
Query: 178 PAPARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARR-PGCGGRRA 236
P P G + G A P P +R LPG R PG G
Sbjct: 922 VGPPG-PPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSG 980
Query: 237 GGARAGQGAHTG 248
+ G +G
Sbjct: 981 EPGKQGPSGASG 992
>gi|169168202 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 40.4 bits (93), Expect = 0.002
Identities = 43/136 (31%), Positives = 50/136 (36%), Gaps = 5/136 (3%)
Query: 118 TGAAGASPAGARSHPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAARARPAS 177
TGAA SP R+ G + R R A G + A R GL S A A
Sbjct: 49 TGAAQRSPTPGRARAAPQQGDGGARRERAAAESLGTQSATLGPR-RGGLRSRTDPAFGAG 107
Query: 178 PAP--ARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARRPGCGGRR 235
P P +RL S AGD A + P PG A RP GGRR
Sbjct: 108 PLPLVSRLGHAGERGSPGAGDVNPVSASSPPGRPDPLLLTTFVFPPGKTSAPRPSPGGRR 167
Query: 236 AG--GARAGQGAHTGV 249
GA G G + G+
Sbjct: 168 GRPLGAARGTGLNPGL 183
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 40.4 bits (93), Expect = 0.002
Identities = 44/156 (28%), Positives = 59/156 (37%), Gaps = 20/156 (12%)
Query: 94 RPREGSPAAPIGDEEWVLRRIWRRTGAAGASPAGARSHPGRASRRGASDRARCA-RGLGG 152
R R G AA + E W R G G G P R GA+ RA+ A + G
Sbjct: 386 RARLGQAAAQMRREGWGARAKLGGRGVCGKCGPGPWDDPARRRNPGAAARAKLAGQRAGR 445
Query: 153 PRVAAASELVRRGLASGAARAR------------------PASPAPARLLPLAVGASAAA 194
R S++ RG G R A+P P+R+L + A A
Sbjct: 446 ARARTGSQVGSRGRGWGPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLLPELPAVDPA 505
Query: 195 GDTRR-TEARAEPSPSRRRRRRCCAPLPGSLPARRP 229
DTRR +A A+ + R + P +LP RP
Sbjct: 506 RDTRREPDAAAQRTELGGRVGKGPGAPPSALPGPRP 541
Score = 34.3 bits (77), Expect = 0.11
Identities = 39/135 (28%), Positives = 47/135 (34%), Gaps = 13/135 (9%)
Query: 131 HPGRASRRGASDRARCARGLG--GPRVAAASELVRRGLASGAARARPASPAPARLLPLAV 188
H GRA+ S R GL AAA LA A R +PA PA R+
Sbjct: 263 HGGRAAAGLGSQRGAALAGLIYLPSAAAAAGRHCPLRLAGQAPRTQPACPAAPRMQ---- 318
Query: 189 GASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARRPGCGGRRAGGARAGQGAHTG 248
T R E + SR +R +P P + G G GAR G+
Sbjct: 319 -------QTEREPWGGEGAGSRFKRLHDESPRPNFPQSLAEGLGVSPQAGARVGEAREAV 371
Query: 249 VGAEDRTLSLEGAPR 263
E L EG R
Sbjct: 372 TTHERAHLDREGEAR 386
Score = 31.2 bits (69), Expect = 0.96
Identities = 61/193 (31%), Positives = 76/193 (39%), Gaps = 33/193 (17%)
Query: 70 LLYQPTPPRSVCVRKGARKTVEALRPREGSPAAPIGDEEWVLRRIWRRTGAAGASPAGAR 129
L+Y P+ + R +A R + PAAP + R W G GA R
Sbjct: 282 LIYLPSAAAAAGRHCPLRLAGQAPRTQPACPAAPRMQQ--TEREPW---GGEGAGSRFKR 336
Query: 130 SHPGRASRRGASDRARCARGLG-----GPRVAAASELV----RRGL-ASGAARARPASPA 179
H S R ++ A GLG G RV A E V R L G ARAR A
Sbjct: 337 LHD--ESPRPNFPQS-LAEGLGVSPQAGARVGEAREAVTTHERAHLDREGEARAR-LGQA 392
Query: 180 PARLLPLAVGASAAAGDTRRTEARAEPSP----SRRRRRRCCAPLPGSLPARRPGCGGRR 235
A++ GA A G R + P P +RRR PG+ A R G+R
Sbjct: 393 AAQMRREGWGARAKLGG-RGVCGKCGPGPWDDPARRRN-------PGA--AARAKLAGQR 442
Query: 236 AGGARAGQGAHTG 248
AG ARA G+ G
Sbjct: 443 AGRARARTGSQVG 455
Score = 29.6 bits (65), Expect = 2.8
Identities = 33/110 (30%), Positives = 40/110 (36%), Gaps = 16/110 (14%)
Query: 117 RTGAAGASPAGARS--------HPGRASRR---GASDRA----RCARGLGGPRVAAASEL 161
R G A+P +R P R +RR A+ R R +G G P A
Sbjct: 481 RWGGEAAAPRPSRVLLPELPAVDPARDTRREPDAAAQRTELGGRVGKGPGAPPSALPGPR 540
Query: 162 VRRGLASGAARARPASPAPARLLPLAV-GASAAAGDTRRTEARAEPSPSR 210
R S P +P PAR LP AV A + D AR P R
Sbjct: 541 PRPDSLSPGEPPGPPTPPPARALPAAVASARCSLRDPGGGSARIRSRPGR 590
>gi|169167967 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 40.4 bits (93), Expect = 0.002
Identities = 43/136 (31%), Positives = 50/136 (36%), Gaps = 5/136 (3%)
Query: 118 TGAAGASPAGARSHPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAARARPAS 177
TGAA SP R+ G + R R A G + A R GL S A A
Sbjct: 49 TGAAQRSPTPGRARAAPQQGDGGARRERAAAESLGTQSATLGPR-RGGLRSRTDPAFGAG 107
Query: 178 PAP--ARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARRPGCGGRR 235
P P +RL S AGD A + P PG A RP GGRR
Sbjct: 108 PLPLVSRLGHAGERGSPGAGDVNPVSASSPPGRPDPLLLTTFVFPPGKTSAPRPSPGGRR 167
Query: 236 AG--GARAGQGAHTGV 249
GA G G + G+
Sbjct: 168 GRPLGAARGTGLNPGL 183
>gi|239745480 PREDICTED: hypothetical protein XP_002343504 [Homo
sapiens]
Length = 243
Score = 40.4 bits (93), Expect = 0.002
Identities = 50/163 (30%), Positives = 63/163 (38%), Gaps = 40/163 (24%)
Query: 93 LRPREGSPAAPI---GDEEWVLR--RIWRRT------------GAAGASPAGARSHPGRA 135
L P G+P++P G W R R W GAA A P G PG
Sbjct: 64 LLPFSGAPSSPSRHPGQCPWAPRLLRAWATRVSAALLTAQFTPGAAAAGPQG----PGST 119
Query: 136 SRRGASDRARCARG----------LGGPRVAAASELVRRGLASG----AARARPASPAP- 180
RR + R RC++ L P+VA R L SG + R R + PA
Sbjct: 120 WRRLLASRFRCSKKSAVQQLTPLLLRSPQVAIFLAGAGRALGSGRPPCSGRRRLSVPAAR 179
Query: 181 ----ARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAP 219
A A AS AAG + +AR +P+ R R CAP
Sbjct: 180 GGEGATSRHWAPAASPAAGGAGKKDARKRKAPAGPRVARGCAP 222
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 40.4 bits (93), Expect = 0.002
Identities = 44/156 (28%), Positives = 59/156 (37%), Gaps = 20/156 (12%)
Query: 94 RPREGSPAAPIGDEEWVLRRIWRRTGAAGASPAGARSHPGRASRRGASDRARCA-RGLGG 152
R R G AA + E W R G G G P R GA+ RA+ A + G
Sbjct: 386 RARLGQAAAQMRREGWGARAKLGGRGVCGKCGPGPWDDPARRRNPGAAARAKLAGQRAGR 445
Query: 153 PRVAAASELVRRGLASGAARAR------------------PASPAPARLLPLAVGASAAA 194
R S++ RG G R A+P P+R+L + A A
Sbjct: 446 ARARTGSQVGSRGRGWGPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLLPELPAVDPA 505
Query: 195 GDTRR-TEARAEPSPSRRRRRRCCAPLPGSLPARRP 229
DTRR +A A+ + R + P +LP RP
Sbjct: 506 RDTRREPDAAAQRTELGGRVGKGPGAPPSALPGPRP 541
Score = 34.3 bits (77), Expect = 0.11
Identities = 39/135 (28%), Positives = 47/135 (34%), Gaps = 13/135 (9%)
Query: 131 HPGRASRRGASDRARCARGLG--GPRVAAASELVRRGLASGAARARPASPAPARLLPLAV 188
H GRA+ S R GL AAA LA A R +PA PA R+
Sbjct: 263 HGGRAAAGLGSQRGAALAGLIYLPSAAAAAGRHCPLRLAGQAPRTQPACPAAPRMQ---- 318
Query: 189 GASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARRPGCGGRRAGGARAGQGAHTG 248
T R E + SR +R +P P + G G GAR G+
Sbjct: 319 -------QTEREPWGGEGAGSRFKRLHDESPRPNFPQSLAEGLGVSPQAGARVGEAREAV 371
Query: 249 VGAEDRTLSLEGAPR 263
E L EG R
Sbjct: 372 TTHERAHLDREGEAR 386
Score = 31.2 bits (69), Expect = 0.96
Identities = 61/193 (31%), Positives = 76/193 (39%), Gaps = 33/193 (17%)
Query: 70 LLYQPTPPRSVCVRKGARKTVEALRPREGSPAAPIGDEEWVLRRIWRRTGAAGASPAGAR 129
L+Y P+ + R +A R + PAAP + R W G GA R
Sbjct: 282 LIYLPSAAAAAGRHCPLRLAGQAPRTQPACPAAPRMQQ--TEREPW---GGEGAGSRFKR 336
Query: 130 SHPGRASRRGASDRARCARGLG-----GPRVAAASELV----RRGL-ASGAARARPASPA 179
H S R ++ A GLG G RV A E V R L G ARAR A
Sbjct: 337 LHD--ESPRPNFPQS-LAEGLGVSPQAGARVGEAREAVTTHERAHLDREGEARAR-LGQA 392
Query: 180 PARLLPLAVGASAAAGDTRRTEARAEPSP----SRRRRRRCCAPLPGSLPARRPGCGGRR 235
A++ GA A G R + P P +RRR PG+ A R G+R
Sbjct: 393 AAQMRREGWGARAKLGG-RGVCGKCGPGPWDDPARRRN-------PGA--AARAKLAGQR 442
Query: 236 AGGARAGQGAHTG 248
AG ARA G+ G
Sbjct: 443 AGRARARTGSQVG 455
Score = 29.6 bits (65), Expect = 2.8
Identities = 33/110 (30%), Positives = 40/110 (36%), Gaps = 16/110 (14%)
Query: 117 RTGAAGASPAGARS--------HPGRASRR---GASDRA----RCARGLGGPRVAAASEL 161
R G A+P +R P R +RR A+ R R +G G P A
Sbjct: 481 RWGGEAAAPRPSRVLLPELPAVDPARDTRREPDAAAQRTELGGRVGKGPGAPPSALPGPR 540
Query: 162 VRRGLASGAARARPASPAPARLLPLAV-GASAAAGDTRRTEARAEPSPSR 210
R S P +P PAR LP AV A + D AR P R
Sbjct: 541 PRPDSLSPGEPPGPPTPPPARALPAAVASARCSLRDPGGGSARIRSRPGR 590
>gi|169167681 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 40.4 bits (93), Expect = 0.002
Identities = 43/136 (31%), Positives = 50/136 (36%), Gaps = 5/136 (3%)
Query: 118 TGAAGASPAGARSHPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAARARPAS 177
TGAA SP R+ G + R R A G + A R GL S A A
Sbjct: 49 TGAAQRSPTPGRARAAPQQGDGGARRERAAAESLGTQSATLGPR-RGGLRSRTDPAFGAG 107
Query: 178 PAP--ARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARRPGCGGRR 235
P P +RL S AGD A + P PG A RP GGRR
Sbjct: 108 PLPLVSRLGHAGERGSPGAGDVNPVSASSPPGRPDPLLLTTFVFPPGKTSAPRPSPGGRR 167
Query: 236 AG--GARAGQGAHTGV 249
GA G G + G+
Sbjct: 168 GRPLGAARGTGLNPGL 183
>gi|239754911 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 40.0 bits (92), Expect = 0.002
Identities = 53/158 (33%), Positives = 57/158 (36%), Gaps = 27/158 (17%)
Query: 116 RRTGAAGASPAGARSHPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAARAR- 174
RR GA SP G RA+ S AR G P AAA+ ASG A R
Sbjct: 36 RRPGAPWVSP-GCSPESLRAAPLPGSLGARSRSHSGPPATAAAAR------ASGHAHGRW 88
Query: 175 PASPAPA---RLLPLAVGASA----------------AAGDTRRTEARAEPSPSRRRRRR 215
P S A A RL P GAS AA R P S RRR
Sbjct: 89 PRSAATACTLRLSPWPGGASCHHRPRYHLRRRPQPHGAASSCSLPRCRLCPERSAPPRRR 148
Query: 216 CCAPLPGSLPARRPGCGGRRAGGARAGQGAHTGVGAED 253
PLP S R C RR G A +G T A +
Sbjct: 149 GPPPLPTSCHWARRSCALRRGGAASWRRGPGTPAAAPE 186
>gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo
sapiens]
Length = 351
Score = 40.0 bits (92), Expect = 0.002
Identities = 52/193 (26%), Positives = 73/193 (37%), Gaps = 29/193 (15%)
Query: 87 RKTVEALRPREGSPAA------PIGDEEWVLRRIWRRTGAAGASPAGARSHPGRASRRGA 140
R++++A + GSP P E W R RR AS AG+R R RG
Sbjct: 82 RRSMQATVAKAGSPGRGRLGKEPRRRESWT-RSAPRRCPYQDASRAGSRVCRSRPQNRGG 140
Query: 141 SD--------RARCARGLGG--PRVAAASELVRRGLASGAARARPASPAPARLLPLAVGA 190
D +A +RG GG PR A+ + R A+ A + L A A
Sbjct: 141 GDKKPRRRGQKAAKSRGGGGKKPRGQKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAA 200
Query: 191 SAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARRPGCGGRRAGGARAGQGAHTGVG 250
+ G ++T A P RRR G A+ G G ++ +A A TGV
Sbjct: 201 KSRGGGGKKTAAAGGKKPRRRR---------GQKAAKSRGGGDKKLERQKA---ALTGVK 248
Query: 251 AEDRTLSLEGAPR 263
+ L G +
Sbjct: 249 SRGDKKPLRGGKK 261
>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 650
Score = 40.0 bits (92), Expect = 0.002
Identities = 51/168 (30%), Positives = 63/168 (37%), Gaps = 60/168 (35%)
Query: 88 KTVEALRPREGSPAAPIGDEEWVLRRIWRRTGAAGASPAGARSHPGRASRRGASDRARCA 147
+ E RPR G ++ RR W R G G P G R P R +R +S R RC+
Sbjct: 191 RVAEGARPRPGPTSS---------RRPWGRAG--GLRPRGKR--PARGKKRPSSQR-RCS 236
Query: 148 RGLGGPRVAAASELVRRGLASGAARARPASPAPARLLPLAVGASAAAGDTRRTEARAEPS 207
P A AS A+ AP P +V A+PS
Sbjct: 237 ----SPSAARAS----------------ATSAPRPTAPSSV---------------AQPS 261
Query: 208 PSRRRRRRCCAPLP---------GSLPARRPGCGGRRAGGARAGQGAH 246
+R +RRR AP P GS AR PG G +G R G H
Sbjct: 262 SARSQRRR--APCPHRAGGADGVGSHGARAPGEGSAGSGTERVELGPH 307
Score = 31.6 bits (70), Expect = 0.74
Identities = 33/118 (27%), Positives = 43/118 (36%), Gaps = 14/118 (11%)
Query: 150 LGGPRVAAASELVRRGLAS---------GAARARPASPAPARLLPLAVGASAAAGDTRRT 200
LGGP ++ S L+ + S G+ R R A+ VG +G RR
Sbjct: 11 LGGPGLSGVSGLLGGEMVSVRPKETSFQGSKRGRLAAGRGLGAKVRVVGRPGNSGGRRRA 70
Query: 201 EARAEPSPSRRRRRRCCAPLPGSLPARRPGCGGRRAGGAR-----AGQGAHTGVGAED 253
RA S R + RR P P + P C + G R A T VG D
Sbjct: 71 GNRAWGSGRRGKSRRSRGPGPWPAGSGGPRCPSAPSDGVRRCPRLTAHAAVTWVGVSD 128
Score = 31.2 bits (69), Expect = 0.96
Identities = 48/173 (27%), Positives = 65/173 (37%), Gaps = 41/173 (23%)
Query: 111 LRRIWRRTGAAGASPAGARSHPGRASRRGASDRAR----CARGLGGPRVAAA-SELVRR- 164
+R + R + G AG R+ + RRG S R+R G GGPR +A S+ VRR
Sbjct: 55 VRVVGRPGNSGGRRRAGNRAWG--SGRRGKSRRSRGPGPWPAGSGGPRCPSAPSDGVRRC 112
Query: 165 -GLASGAARA------------RPASPAPARLLPLAVGASAAAG---------------- 195
L + AA + +S R L L G AG
Sbjct: 113 PRLTAHAAVTWVGVSDWRGSFLKLSSSRSTRGLVLGEGVGVGAGGEGGGEGAAGAASSLS 172
Query: 196 --DTRRTEARAEPSPSRRRRRRCCAPLPGSLPARRP--GCGGRRAGGARAGQG 244
+ R E +++ S R P PG +RRP GG R G R +G
Sbjct: 173 ERSSERVELQSDTDDSDTRVAEGARPRPGPTSSRRPWGRAGGLRPRGKRPARG 225
>gi|239749451 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 40.0 bits (92), Expect = 0.002
Identities = 53/158 (33%), Positives = 57/158 (36%), Gaps = 27/158 (17%)
Query: 116 RRTGAAGASPAGARSHPGRASRRGASDRARCARGLGGPRVAAASELVRRGLASGAARAR- 174
RR GA SP G RA+ S AR G P AAA+ ASG A R
Sbjct: 36 RRPGAPWVSP-GCSPESLRAAPLPGSLGARSRSHSGPPATAAAAR------ASGHAHGRW 88
Query: 175 PASPAPA---RLLPLAVGASA----------------AAGDTRRTEARAEPSPSRRRRRR 215
P S A A RL P GAS AA R P S RRR
Sbjct: 89 PRSAATACTLRLSPWPGGASCHHRPRYHLRRRPQPHGAASSCSLPRCRLCPERSAPPRRR 148
Query: 216 CCAPLPGSLPARRPGCGGRRAGGARAGQGAHTGVGAED 253
PLP S R C RR G A +G T A +
Sbjct: 149 GPPPLPTSCHWARRSCALRRGGAASWRRGPGTPAAAPE 186
>gi|239749077 PREDICTED: hypothetical protein XP_002346898 [Homo
sapiens]
Length = 334
Score = 40.0 bits (92), Expect = 0.002
Identities = 62/223 (27%), Positives = 77/223 (34%), Gaps = 57/223 (25%)
Query: 72 YQPTPPRSVCVRKGARKTVEALRPREGSPAAPIGDEEWVLRR------------IWRRTG 119
++P P + +R + + LR AA + D E LRR + R G
Sbjct: 89 HRPVPAAAAILRAAVHRVLRVLRA-----AAAVRDAERGLRREGPRRHAPPRKQLRGRRG 143
Query: 120 AAGASPAGARSHPGRASRRGASDRARCARGLGGPR---VAAASELVRRGLASGAARA--- 173
AAG AG H GR RG GL P V A+ L+ G + + RA
Sbjct: 144 AAGLVSAG---HLGREPPRGG--------GLRPPALVPVPLATPLLLEGRSEPSTRACAV 192
Query: 174 ------------RPASPAPARLLPLA--VGASAAAGDTRRTEARAEPSPSRRRRRRCCAP 219
RPA AR P A GA+A A R A P + RR
Sbjct: 193 SGGQAALLGAHVRPAPDRAARCAPRAKKAGANAGARGQGRGAAAGPERPPHVQGRR---- 248
Query: 220 LPGSLPARRPGCGGRRAGGARAGQGAHTGVGAEDRTLSLEGAP 262
PA R G RRA G+ E R EG P
Sbjct: 249 -----PAPRGAVGARRALLGAVGKAGGLTRARETRRRGEEGVP 286
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,480,731
Number of Sequences: 37866
Number of extensions: 761224
Number of successful extensions: 5833
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 695
Number of HSP's that attempted gapping in prelim test: 4831
Number of HSP's gapped (non-prelim): 1485
length of query: 263
length of database: 18,247,518
effective HSP length: 100
effective length of query: 163
effective length of database: 14,460,918
effective search space: 2357129634
effective search space used: 2357129634
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.