Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239741896
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741896 PREDICTED: hypothetical protein XP_002342335 [Homo
sapiens]
(347 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239741896 PREDICTED: hypothetical protein XP_002342335 [Homo ... 723 0.0
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 48 1e-05
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 48 1e-05
gi|148762978 similar to CG15216-PA [Homo sapiens] 47 3e-05
gi|48762934 alpha 2 type I collagen [Homo sapiens] 45 7e-05
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 45 7e-05
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 45 7e-05
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 45 1e-04
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 45 1e-04
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 45 1e-04
gi|18702331 OTU domain containing 7A [Homo sapiens] 45 1e-04
gi|223633935 hypothetical protein LOC254427 [Homo sapiens] 44 2e-04
gi|239755634 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ... 44 2e-04
gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ... 44 2e-04
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 44 3e-04
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 43 4e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 43 4e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 43 5e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 42 8e-04
gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens] 42 0.001
gi|21618325 forkhead box E1 [Homo sapiens] 42 0.001
gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens] 42 0.001
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 41 0.001
gi|239757729 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 41 0.002
gi|239752222 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|239746743 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|46409434 hypothetical protein LOC388759 [Homo sapiens] 41 0.002
gi|194272140 dendrin [Homo sapiens] 40 0.002
>gi|239741896 PREDICTED: hypothetical protein XP_002342335 [Homo
sapiens]
Length = 347
Score = 723 bits (1866), Expect = 0.0
Identities = 347/347 (100%), Positives = 347/347 (100%)
Query: 1 MLDWEASYGKGEALGTGPGTQTLRKTAKEPNFVLVEVCGIYHFKPARWLLLLGGPTAHPP 60
MLDWEASYGKGEALGTGPGTQTLRKTAKEPNFVLVEVCGIYHFKPARWLLLLGGPTAHPP
Sbjct: 1 MLDWEASYGKGEALGTGPGTQTLRKTAKEPNFVLVEVCGIYHFKPARWLLLLGGPTAHPP 60
Query: 61 LPKGNALLLQGRGYTTHPLHGSDGEPETCPSLSPFRSTPGFNRFSLEPTLARSFTHAGAR 120
LPKGNALLLQGRGYTTHPLHGSDGEPETCPSLSPFRSTPGFNRFSLEPTLARSFTHAGAR
Sbjct: 61 LPKGNALLLQGRGYTTHPLHGSDGEPETCPSLSPFRSTPGFNRFSLEPTLARSFTHAGAR 120
Query: 121 AGRASPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSGRGCRDSGATYPA 180
AGRASPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSGRGCRDSGATYPA
Sbjct: 121 AGRASPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSGRGCRDSGATYPA 180
Query: 181 GARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPACLPEGEDAPVAPP 240
GARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPACLPEGEDAPVAPP
Sbjct: 181 GARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPACLPEGEDAPVAPP 240
Query: 241 SSARPALPSFLLRPSGYLAARRQRGPGSGAAETGFRGSCAGCGRGLRIQSHPGTTHLHQG 300
SSARPALPSFLLRPSGYLAARRQRGPGSGAAETGFRGSCAGCGRGLRIQSHPGTTHLHQG
Sbjct: 241 SSARPALPSFLLRPSGYLAARRQRGPGSGAAETGFRGSCAGCGRGLRIQSHPGTTHLHQG 300
Query: 301 ASFTSSEPLSGISSPRGVWASGCLAPFPQPLIHGEQRRALPEAGLGL 347
ASFTSSEPLSGISSPRGVWASGCLAPFPQPLIHGEQRRALPEAGLGL
Sbjct: 301 ASFTSSEPLSGISSPRGVWASGCLAPFPQPLIHGEQRRALPEAGLGL 347
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 47.8 bits (112), Expect = 1e-05
Identities = 45/163 (27%), Positives = 62/163 (38%), Gaps = 11/163 (6%)
Query: 125 SPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSGRGCRDSGATYPAGARR 184
+P R GA E Q+ + R++ PR GRG R
Sbjct: 248 APGRSRVGAALTEEQAAGEAAARGLWRRKPAPCPRGACAARLGGRGT----------GRA 297
Query: 185 SLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPACLPEGEDAPVAPPSSAR 244
AE GP+ + E+ SG R P+ +A S + P C G+ AP PP AR
Sbjct: 298 RRAEFRVAGPRGVAEEAESGRGWRSWPSFSAVSGGGESPDPAGC-SRGKAAPEEPPRVAR 356
Query: 245 PALPSFLLRPSGYLAARRQRGPGSGAAETGFRGSCAGCGRGLR 287
A + L + L +RG G G G+ +G RG R
Sbjct: 357 RAHENRLRTSARGLGPGDRRGDGRFGGGRGAEGAGSGLPRGGR 399
Score = 30.0 bits (66), Expect = 3.2
Identities = 39/118 (33%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
Query: 60 PLPKGN-ALLLQGRGY-----TTHPLHGSDGEPETCPSLSPFRSTPGFNRFSLEPTLARS 113
P P+G A L GRG + G G E S +RS P F+ S S
Sbjct: 279 PCPRGACAARLGGRGTGRARRAEFRVAGPRGVAEEAESGRGWRSWPSFSAVSGG---GES 335
Query: 114 FTHAGARAGRASPE-PCRRGAQSMEPQSR--AWESQPADGRKQSREAPRSGYEGDGSG 168
AG G+A+PE P R ++ E + R A P D R R G EG GSG
Sbjct: 336 PDPAGCSRGKAAPEEPPRVARRAHENRLRTSARGLGPGDRRGDGRFGGGRGAEGAGSG 393
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 47.8 bits (112), Expect = 1e-05
Identities = 45/163 (27%), Positives = 62/163 (38%), Gaps = 11/163 (6%)
Query: 125 SPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSGRGCRDSGATYPAGARR 184
+P R GA E Q+ + R++ PR GRG R
Sbjct: 248 APGRSRVGAALTEEQAAGEAAARGLWRRKPAPCPRGACAARLGGRGT----------GRA 297
Query: 185 SLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPACLPEGEDAPVAPPSSAR 244
AE GP+ + E+ SG R P+ +A S + P C G+ AP PP AR
Sbjct: 298 RRAEFRVAGPRGVAEEAESGRGWRSWPSFSAVSGGGESPDPAGC-SRGKAAPEEPPRVAR 356
Query: 245 PALPSFLLRPSGYLAARRQRGPGSGAAETGFRGSCAGCGRGLR 287
A + L + L +RG G G G+ +G RG R
Sbjct: 357 RAHENRLRTSARGLGPGDRRGDGRFGGGRGAEGAGSGLPRGGR 399
Score = 30.0 bits (66), Expect = 3.2
Identities = 39/118 (33%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
Query: 60 PLPKGN-ALLLQGRGY-----TTHPLHGSDGEPETCPSLSPFRSTPGFNRFSLEPTLARS 113
P P+G A L GRG + G G E S +RS P F+ S S
Sbjct: 279 PCPRGACAARLGGRGTGRARRAEFRVAGPRGVAEEAESGRGWRSWPSFSAVSGG---GES 335
Query: 114 FTHAGARAGRASPE-PCRRGAQSMEPQSR--AWESQPADGRKQSREAPRSGYEGDGSG 168
AG G+A+PE P R ++ E + R A P D R R G EG GSG
Sbjct: 336 PDPAGCSRGKAAPEEPPRVARRAHENRLRTSARGLGPGDRRGDGRFGGGRGAEGAGSG 393
>gi|148762978 similar to CG15216-PA [Homo sapiens]
Length = 976
Score = 46.6 bits (109), Expect = 3e-05
Identities = 66/240 (27%), Positives = 93/240 (38%), Gaps = 29/240 (12%)
Query: 112 RSFTHAGARAGRAS---PEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSG 168
RSF A G A PEP +S P++R E++P R +S+ APR+
Sbjct: 51 RSFDFLEALDGPAMETLPEP--PPPESAVPRARTREAEPRR-RARSKSAPRAP------- 100
Query: 169 RGCRDSGATYPAGARRSLAEAERVGPKPLPEQERSGASGRCL-----PAPAAFSAAAPAR 223
G + A+ P RR + P +E + + R L P P R
Sbjct: 101 PGLTPAPASPPVLPRRGREAQRAARAEASPRREPAYPALRALANELHPIKLQPQRGGPGR 160
Query: 224 RPPACLPEGEDAPVAPPSSARPALPSFL-LRPSGYLAARRQRGPGS-GAAETGFRGSCAG 281
P C G AP PP+ P + L ++P + RG S G E A
Sbjct: 161 VAPLCAAAGRCAPPEPPAGPAPHVRCRLDIKPDDAVLQHATRGSRSCGPTEAAHWARPAP 220
Query: 282 CGRGLRIQSHPGTTHLHQGASFTSSEPLSGISSPRGVWASGCLAPFPQPLIHGEQRRALP 341
GL + PG H+ + T S+ S + PR + G P P P + E RR+LP
Sbjct: 221 QFHGLTV---PGPRHMALSRTPTPSD--SYCADPRAFYCDG---PLPGPRDYAE-RRSLP 271
Score = 28.9 bits (63), Expect = 7.1
Identities = 33/112 (29%), Positives = 40/112 (35%), Gaps = 14/112 (12%)
Query: 138 PQSRAWESQPADGRKQSREAPRSGYEGDGSGRGCRDSGAT------YPAGARRSLAEAER 191
P +RAWE R AP G D T P + S A+
Sbjct: 546 PSARAWELPGGRTRPPPHAAPDGPTSGRQRSLEQLDELITDLVIDSRPTAGQASEPAADC 605
Query: 192 VGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPACLPEGEDAPVAPPSSA 243
+GP Q R R PA + A AP R PPA E+ P AP +A
Sbjct: 606 LGP-----QLRRLLDSR--PAGSGAPALAPPRSPPASAGSAEE-PAAPGEAA 649
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 45.4 bits (106), Expect = 7e-05
Identities = 62/214 (28%), Positives = 81/214 (37%), Gaps = 40/214 (18%)
Query: 121 AGRASPE--PCRRGAQSMEPQSRAWESQPA-------DGRKQSREAPRS-GYEGDGSGRG 170
AG + P P RGA + P + + +P GR +R AP + G G G
Sbjct: 633 AGPSGPSGLPGERGAAGI-PGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATG 691
Query: 171 CRD----SGATYPAGARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPP 226
R +G PAG R S E VGP +G +G PA AA A R
Sbjct: 692 DRGEAGAAGPAGPAGPRGSPGERGEVGP--------AGPNGFAGPAGAAGQPGAKGERG- 742
Query: 227 ACLPEGEDA---PVAPPSSARPALPSFLLRPSGYLAARRQRGPGSGAAETGFRGSCAGCG 283
A P+GE+ P P +A PA P+ P+G RG G TGF G+ G
Sbjct: 743 AKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAG------SRGDGGPPGMTGFPGAAGRTG 796
Query: 284 RGLRIQSHPGTTHLHQGASFTSSEPLSGISSPRG 317
PG + + G+ PRG
Sbjct: 797 -------PPGPSGISGPPGPPGPAGKEGLRGPRG 823
Score = 29.6 bits (65), Expect = 4.2
Identities = 60/199 (30%), Positives = 68/199 (34%), Gaps = 42/199 (21%)
Query: 144 ESQP-ADGRKQSREAP-RSGYEGDGSGRGCRDS----GATYPAGARRSLAEAERVGPK-P 196
+ QP A G K AP +G G RG GA PAGAR S VGP P
Sbjct: 189 KGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGP 248
Query: 197 LPEQERSGASGRCLPAP----AAFSAAAPA----RRPPACLPEGEDAPVAPP-------- 240
+ G G P P A A PA R LP G PV PP
Sbjct: 249 IGSAGPPGFPG--APGPKGEIGAVGNAGPAGPAGPRGEVGLP-GLSGPVGPPGNPGANGL 305
Query: 241 --SSARPALPSFLLRPSGYLAARRQRGPGSGAAETGFRGSCAGCGRGLRIQSHPGTTHLH 298
+ LP P G R GP A TG RG + PG
Sbjct: 306 TGAKGAAGLPGVAGAP-GLPGPRGIPGPVGAAGATGARG----------LVGEPGPAG-S 353
Query: 299 QGASFTSSEPLSGISSPRG 317
+G S EP G + P+G
Sbjct: 354 KGESGNKGEP--GSAGPQG 370
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 45.4 bits (106), Expect = 7e-05
Identities = 51/178 (28%), Positives = 68/178 (38%), Gaps = 34/178 (19%)
Query: 122 GRASPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSGRGCRDSGATYPAG 181
G+ P P A+ P + A G++ R R+G + GRG P+G
Sbjct: 414 GKCGPGPWDDPARRRNPGAAA--RAKLAGQRAGRARARTGSQVGSRGRGWGPGAGRVPSG 471
Query: 182 ARRSLAEAERVG-----PKP----LPE-----------------QERSGASGRCLPAPAA 215
RR + ER G P+P LPE +R+ GR P A
Sbjct: 472 GRRGVGNPERWGGEAAAPRPSRVLLPELPAVDPARDTRREPDAAAQRTELGGRVGKGPGA 531
Query: 216 FSAAAPARRP-PACLPEGE--DAPVAPPSSARPALPSFL---LRPSGYLAARRQRGPG 267
+A P RP P L GE P PP+ A PA + LR G +AR + PG
Sbjct: 532 PPSALPGPRPRPDSLSPGEPPGPPTPPPARALPAAVASARCSLRDPGGGSARIRSRPG 589
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 45.4 bits (106), Expect = 7e-05
Identities = 51/178 (28%), Positives = 68/178 (38%), Gaps = 34/178 (19%)
Query: 122 GRASPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSGRGCRDSGATYPAG 181
G+ P P A+ P + A G++ R R+G + GRG P+G
Sbjct: 414 GKCGPGPWDDPARRRNPGAAA--RAKLAGQRAGRARARTGSQVGSRGRGWGPGAGRVPSG 471
Query: 182 ARRSLAEAERVG-----PKP----LPE-----------------QERSGASGRCLPAPAA 215
RR + ER G P+P LPE +R+ GR P A
Sbjct: 472 GRRGVGNPERWGGEAAAPRPSRVLLPELPAVDPARDTRREPDAAAQRTELGGRVGKGPGA 531
Query: 216 FSAAAPARRP-PACLPEGE--DAPVAPPSSARPALPSFL---LRPSGYLAARRQRGPG 267
+A P RP P L GE P PP+ A PA + LR G +AR + PG
Sbjct: 532 PPSALPGPRPRPDSLSPGEPPGPPTPPPARALPAAVASARCSLRDPGGGSARIRSRPG 589
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 45.1 bits (105), Expect = 1e-04
Identities = 59/200 (29%), Positives = 83/200 (41%), Gaps = 30/200 (15%)
Query: 59 PPLPKGNALLLQGR--GYTTHPLHGSDGEPETCPSLSPFRSTPGFNRFSLEPTLARSFTH 116
PP K AL L G G TT DG+ + SP PG +R AR
Sbjct: 715 PPCHKSPALKLPGMTTGATTQTATLPDGQTDRARPWSP--PAPGESR-----DRARGAGQ 767
Query: 117 AGARAGRASPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSGR------G 170
G +G GA+ P+ RA ++Q R + ++ R G +GR G
Sbjct: 768 PGPGSGS--------GAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESG 819
Query: 171 CRDSGATYPAGARRSLAEAER-VGPKPLPEQERSGASGR-CLPAPAAFSAAAPARRPPAC 228
R +GAT RR+ + A + +PLP + ++GR LP+PAA +A + A
Sbjct: 820 RRRAGATSQGAIRRAASRARKGESRRPLP----ANSAGRPALPSPAAARSARGSWGLRAS 875
Query: 229 LPEGEDAPVAPPSSARPALP 248
P AP PP+ R P
Sbjct: 876 RP-SRAAPRGPPNFQRCPAP 894
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 45.1 bits (105), Expect = 1e-04
Identities = 57/209 (27%), Positives = 79/209 (37%), Gaps = 27/209 (12%)
Query: 94 PFRSTPGFNRFSLEPTLARSFTHAGARAGRASPEPCRRGAQSMEPQSRAWESQPAD--GR 151
PF + P FN + ++ + + R G+ RR A ++ AW + PA GR
Sbjct: 121 PFVNNP-FNLYLVQLLGSHGGRRSCGREGQGRGGRRRRAADTLFQLGPAWPALPAPAAGR 179
Query: 152 KQSREAPRS--GYEGDGSGRGCRDSGATYPAGARRSLAEAERVGPKPLPEQERSGASGRC 209
+ P + G G + RGC A R+ + A R+ + + +G +G
Sbjct: 180 ALGTDEPLALRGQCGPAARRGCAQEQLRNAPWAPRAHSPAGRLALGLIAPRRGAGRAGA- 238
Query: 210 LPAPAAFSAAAPARRPPACLPEGEDAPVAPPSSARP-------ALPSFLLRPSGYLAAR- 261
AAA RR P V S RP ++PS RP G R
Sbjct: 239 -------GAAACGRRGRIAAPLS--GVVQKASYLRPKNLPRLLSMPSAAARPCGAALPRS 289
Query: 262 ----RQRGPGSGAAETGFRGSCAGCGRGL 286
R RG G AA G RG CG GL
Sbjct: 290 GFSGRPRGRGGAAAGRGSRGEHPACGVGL 318
Score = 36.2 bits (82), Expect = 0.045
Identities = 59/182 (32%), Positives = 68/182 (37%), Gaps = 34/182 (18%)
Query: 118 GARAGRAS--PEPC-----RRGAQSMEPQSRAWESQP-ADGRKQSR-EAPRSGYEGDGSG 168
GA AGR S P RG + A ++P A G SR EA R DG
Sbjct: 300 GAAAGRGSRGEHPACGVGLARGTAPQPASTWALAARPRAGGTWTSRFEAQRGCAHQDGQR 359
Query: 169 RGCRDSGATYPAGARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPAC 228
R +G AR R P+ LP R P A S A PAR PA
Sbjct: 360 RTRDGAGNHASEPARVWSPPPRRQRPRRLPRASLQEEPKRRPPC-ARPSGAGPAREGPAA 418
Query: 229 LPEGEDAPVAPPSSARPALPSFLLRPSGYLAARRQ------RGPGSGAAETGFR-GSCAG 281
P G AP P + RP+G RRQ R P G A +G+ GS AG
Sbjct: 419 WPGG--APTPPHA-----------RPTG----RRQDPEPGPRAPRGGPASSGWHAGSAAG 461
Query: 282 CG 283
G
Sbjct: 462 RG 463
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 45.1 bits (105), Expect = 1e-04
Identities = 57/209 (27%), Positives = 79/209 (37%), Gaps = 27/209 (12%)
Query: 94 PFRSTPGFNRFSLEPTLARSFTHAGARAGRASPEPCRRGAQSMEPQSRAWESQPAD--GR 151
PF + P FN + ++ + + R G+ RR A ++ AW + PA GR
Sbjct: 121 PFVNNP-FNLYLVQLLGSHGGRRSCGREGQGRGGRRRRAADTLFQLGPAWPALPAPAAGR 179
Query: 152 KQSREAPRS--GYEGDGSGRGCRDSGATYPAGARRSLAEAERVGPKPLPEQERSGASGRC 209
+ P + G G + RGC A R+ + A R+ + + +G +G
Sbjct: 180 ALGTDEPLALRGQCGPAARRGCAQEQLRNAPWAPRAHSPAGRLALGLIAPRRGAGRAGA- 238
Query: 210 LPAPAAFSAAAPARRPPACLPEGEDAPVAPPSSARP-------ALPSFLLRPSGYLAAR- 261
AAA RR P V S RP ++PS RP G R
Sbjct: 239 -------GAAACGRRGRIAAPLS--GVVQKASYLRPKNLPRLLSMPSAAARPCGAALPRS 289
Query: 262 ----RQRGPGSGAAETGFRGSCAGCGRGL 286
R RG G AA G RG CG GL
Sbjct: 290 GFSGRPRGRGGAAAGRGSRGEHPACGVGL 318
Score = 36.2 bits (82), Expect = 0.045
Identities = 59/182 (32%), Positives = 68/182 (37%), Gaps = 34/182 (18%)
Query: 118 GARAGRAS--PEPC-----RRGAQSMEPQSRAWESQP-ADGRKQSR-EAPRSGYEGDGSG 168
GA AGR S P RG + A ++P A G SR EA R DG
Sbjct: 300 GAAAGRGSRGEHPACGVGLARGTAPQPASTWALAARPRAGGTWTSRFEAQRGCAHQDGQR 359
Query: 169 RGCRDSGATYPAGARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPAC 228
R +G AR R P+ LP R P A S A PAR PA
Sbjct: 360 RTRDGAGNHASEPARVWSPPPRRQRPRRLPRASLQEEPKRRPPC-ARPSGAGPAREGPAA 418
Query: 229 LPEGEDAPVAPPSSARPALPSFLLRPSGYLAARRQ------RGPGSGAAETGFR-GSCAG 281
P G AP P + RP+G RRQ R P G A +G+ GS AG
Sbjct: 419 WPGG--APTPPHA-----------RPTG----RRQDPEPGPRAPRGGPASSGWHAGSAAG 461
Query: 282 CG 283
G
Sbjct: 462 RG 463
>gi|18702331 OTU domain containing 7A [Homo sapiens]
Length = 926
Score = 45.1 bits (105), Expect = 1e-04
Identities = 48/145 (33%), Positives = 58/145 (40%), Gaps = 29/145 (20%)
Query: 199 EQERSGASGRCLPAPAAFSAAAPARRPPACLPEGEDAPVAPPSSARPALPSFLLRPSGYL 258
EQE+ A AA +AAA A+RPP PE E PV P A P P+ L+ L
Sbjct: 668 EQEQRRRDAATAAAAAAAAAAATAKRPPR-RPETEGVPV--PERASPGPPTQLVLK---L 721
Query: 259 AARRQRGPGSGAAETGFRGSCAGCGRGLRIQSHPGTTHLHQGASFTSSEPLSGISSPRGV 318
R GP +G A G A G G R S +S P+ G S P
Sbjct: 722 KERPSPGPAAGRAARAAAGGTASPGGGARRAS--------------ASGPVPGRSPP--- 764
Query: 319 WASGCLAPFPQPLIHGEQRRALPEA 343
AP Q +IH + A EA
Sbjct: 765 ------APARQSVIHVQASGARDEA 783
Score = 32.3 bits (72), Expect = 0.64
Identities = 42/149 (28%), Positives = 51/149 (34%), Gaps = 18/149 (12%)
Query: 117 AGARAGRASPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSGRGCRDSGA 176
A A A A P R + + RA P + +E P G + R A
Sbjct: 684 AAAAAATAKRPPRRPETEGVPVPERASPGPPTQLVLKLKERPSPGPAAGRAARAAAGGTA 743
Query: 177 TYPAGARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFS---AAAPARRPPACLPE-G 232
+ GARR+ A GP P GR PAPA S A R AC P G
Sbjct: 744 SPGGGARRASAS----GPVP----------GRSPPAPARQSVIHVQASGARDEACAPAVG 789
Query: 233 EDAPVAPPSSARPALPSFLLRPSGYLAAR 261
P A +L S P+ A R
Sbjct: 790 ALRPCATYPQQNRSLSSQSYSPARAAALR 818
>gi|223633935 hypothetical protein LOC254427 [Homo sapiens]
Length = 435
Score = 44.3 bits (103), Expect = 2e-04
Identities = 60/228 (26%), Positives = 77/228 (33%), Gaps = 51/228 (22%)
Query: 86 PETCPSLSPFRSTPGFNRFSLE--------PTLARSFTHAGARAGRASPEPCRRGAQSME 137
PET + P STP R L P L RS A + S G +++
Sbjct: 155 PETLLAPPPLPSTPDPPRRELRAPSPPVEHPRLLRSVPTPLVMAQKISERMA--GNEALS 212
Query: 138 PQSRAWESQPADGRKQSREAPRSGYEGDGSGRGCRDSGATYPAG----------ARRSLA 187
P S E +P + R + PRSG G G + +P+ RR+L+
Sbjct: 213 PTSPFREGRPGEWRTPAARGPRSGDPGPGPSHPAQPKAPRFPSNIIVTNGAAREPRRTLS 272
Query: 188 EAE----------------RVGPKPLPEQERSG-----------ASGRCLPAPA-AFSAA 219
A G P G A GR LP PA + A
Sbjct: 273 RAAVSVQERRAQVLATIHGHAGAFPAAGDAGEGAPGGGSSPERVARGRGLPGPAESLRAG 332
Query: 220 APARRPPAC---LPEGEDAPVAPPSSARPALPSFLLRPSGYLAARRQR 264
A R PA P +A + PSS PA S RP L + R R
Sbjct: 333 GQAPRGPALANGFPSAHEALKSAPSSFAPAGKSLCFRPGPALPSTRAR 380
>gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]
Length = 449
Score = 43.9 bits (102), Expect = 2e-04
Identities = 53/175 (30%), Positives = 67/175 (38%), Gaps = 38/175 (21%)
Query: 121 AGRASPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSGRGCRDS------ 174
AGR + C G +S+ S P GR + R A G G G GCRDS
Sbjct: 26 AGRCARSCCCCGRRSLPSVSG-----PVRGRAERRPARGKHVRGGGVG-GCRDSRAGGSH 79
Query: 175 ----GATYPAGARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPACLP 230
G P + +L E PK L G + R P+A S+AA + PP+ +P
Sbjct: 80 AAPSGLGVPGDSESALGLLEPGPPKSLRISVTLGQAPRA--GPSAASSAAAGKTPPSRVP 137
Query: 231 EGEDAPVAPPSSARPALPSFLLRPSGYLAARRQRGPGSGAAETGFRGSCAGCGRG 285
A PSS R A + RR+ G RG CAG RG
Sbjct: 138 -------AEPSSRRGA------------SKRRESWRTDGERLRSGRG-CAGAARG 172
>gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo
sapiens]
Length = 402
Score = 43.9 bits (102), Expect = 2e-04
Identities = 53/175 (30%), Positives = 67/175 (38%), Gaps = 38/175 (21%)
Query: 121 AGRASPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSGRGCRDS------ 174
AGR + C G +S+ S P GR + R A G G G GCRDS
Sbjct: 26 AGRCARSCCCCGRRSLPSVSG-----PVRGRAERRPARGKHVRGGGVG-GCRDSRAGGSH 79
Query: 175 ----GATYPAGARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPACLP 230
G P + +L E PK L G + R P+A S+AA + PP+ +P
Sbjct: 80 AAPSGLGVPGDSESALGLLEPGPPKSLRISVTLGQAPRA--GPSAASSAAAGKTPPSRVP 137
Query: 231 EGEDAPVAPPSSARPALPSFLLRPSGYLAARRQRGPGSGAAETGFRGSCAGCGRG 285
A PSS R A + RR+ G RG CAG RG
Sbjct: 138 -------AEPSSRRGA------------SKRRESWRTDGERLRSGRG-CAGAARG 172
>gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo
sapiens]
Length = 449
Score = 43.9 bits (102), Expect = 2e-04
Identities = 53/175 (30%), Positives = 67/175 (38%), Gaps = 38/175 (21%)
Query: 121 AGRASPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSGRGCRDS------ 174
AGR + C G +S+ S P GR + R A G G G GCRDS
Sbjct: 26 AGRCARSCCCCGRRSLPSVSG-----PVRGRAERRPARGKHVRGGGVG-GCRDSRAGGSH 79
Query: 175 ----GATYPAGARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPACLP 230
G P + +L E PK L G + R P+A S+AA + PP+ +P
Sbjct: 80 AAPSGLGVPGDSESALGLLEPGPPKSLRISVTLGQAPRA--GPSAASSAAAGKTPPSRVP 137
Query: 231 EGEDAPVAPPSSARPALPSFLLRPSGYLAARRQRGPGSGAAETGFRGSCAGCGRG 285
A PSS R A + RR+ G RG CAG RG
Sbjct: 138 -------AEPSSRRGA------------SKRRESWRTDGERLRSGRG-CAGAARG 172
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 43.5 bits (101), Expect = 3e-04
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 8/123 (6%)
Query: 128 PCRRGAQSMEPQSRAWESQ--PADGRKQSREAPRSGYEGDGSGRGCRDSGATYPAGARRS 185
P +G +S P+S + Q P G K P+ G + G + G G++
Sbjct: 80 PPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQ 139
Query: 186 LAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPACLPEGEDAPVAPPSSARP 245
A + P+ P+QE + G P P A + PPA P+G P PP RP
Sbjct: 140 SARSPPGKPQGPPQQEGNNPQG---PPPPAGGNPQQPQAPPAGQPQG---PPRPPQGGRP 193
Query: 246 ALP 248
+ P
Sbjct: 194 SRP 196
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 43.1 bits (100), Expect = 4e-04
Identities = 47/163 (28%), Positives = 57/163 (34%), Gaps = 21/163 (12%)
Query: 111 ARSFTHAGARAGRASPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSGRG 170
AR+ AG RAG A P PCR + +R P R R+G S G
Sbjct: 88 ARASRAAGRRAGPAGP-PCRAPGRGRAAATRR-SPAPGTARGSPAGVERAGGATAASSAG 145
Query: 171 CRD----------SGATYPAGARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAA 220
R G + AG+R R G LP S +P P A A
Sbjct: 146 TRSVPARRLPPPCGGTSLGAGSRA----LRRPGSAALPRSPSSSRRWAAMPGPGAPRPGA 201
Query: 221 PARRP---PACLPEGEDAPVAPPSSARPALPSFLLRPSGYLAA 260
P P P A VAPP A P+ R G++AA
Sbjct: 202 PGTWPVGFAVAAPPAAAASVAPPPPAVAGAPAAAFR--GWVAA 242
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 43.1 bits (100), Expect = 4e-04
Identities = 65/248 (26%), Positives = 80/248 (32%), Gaps = 38/248 (15%)
Query: 105 SLEPTLARSFTHAGARAGRASPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEG 164
SLE LA S H A R P R A + + PA AP G G
Sbjct: 28 SLESQLAASAAHHHHLAPRT---PEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPG 84
Query: 165 DG-----SGRGCRDSGATY---PAGARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAF 216
+GR G P RR L A P G++G C P PAA
Sbjct: 85 AAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAA 144
Query: 217 SAAAPARRPPACLPEGEDAPVAPPSSARPALPSFLLRPSGYLAARRQRGPGSGAAETGFR 276
+ AA E AP P A+PA P+ L +G GPG G
Sbjct: 145 AVAAGP----------EPAPAGP---AKPAGPAALAARAG-----PGPGPGPGPGPGPGP 186
Query: 277 GSCAGCGRGLRIQSHPGTTHLHQGASFTSSEPLSGISSPRGVWASGCLAPFPQPLIHGEQ 336
G AG G + + H A+ S +G L P P+P G
Sbjct: 187 GKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNG---------PAALLPLPKPAAPGTV 237
Query: 337 RRALPEAG 344
+ P G
Sbjct: 238 IQTPPFVG 245
Score = 35.4 bits (80), Expect = 0.076
Identities = 76/279 (27%), Positives = 90/279 (32%), Gaps = 65/279 (23%)
Query: 53 GGPTAHP-PLPKGNALLLQGRGYTTHPLHGSDGEPET----CPSLSPFRSTPGFNRFSLE 107
G P A P P P G A G G P S P P + R P + S
Sbjct: 81 GAPGAAPEPPPAGRAR--PGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCA 138
Query: 108 PTLARSFTHAGARAGRASPEPCRRG-AQSMEPQSRAWESQPADGRKQSREAPRSGYEGDG 166
P A A A A PEP G A+ P + A + P G P G G G
Sbjct: 139 PVPA-------AAAVAAGPEPAPAGPAKPAGPAALAARAGPGPG-----PGPGPG-PGPG 185
Query: 167 SGRGCRDSGATYPAGARRSLAEAERVGPK------------PLPEQERSGA--------- 205
G+ A G+ L P PLP+ G
Sbjct: 186 PGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVG 245
Query: 206 ----------SGRCLPAPAAFSAAAPARRP-PACLPEGEDAPVAPPSSARPALPSFLLRP 254
S PAPAA +AA P P PA L P PP++A PA+P
Sbjct: 246 AAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAA-PAVPP----- 299
Query: 255 SGYLAARRQRGPGSGAAETGFRGSCAGCGRGLRIQSHPG 293
A Q G +GAA AG G+ Q PG
Sbjct: 300 ----PAAAQNGGSAGAAPA--PAPAAGGPAGVSGQPGPG 332
Score = 28.5 bits (62), Expect = 9.3
Identities = 22/62 (35%), Positives = 25/62 (40%), Gaps = 15/62 (24%)
Query: 213 PAAFSAAAPARRPPACLPEGEDAPVAP---PSSARPALPSFLLRPSGYLAARRQRGPGSG 269
PA AAPA PPA G A AP P++ PA Q GPG+
Sbjct: 287 PAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPA------------GVSGQPGPGAA 334
Query: 270 AA 271
AA
Sbjct: 335 AA 336
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 42.7 bits (99), Expect = 5e-04
Identities = 67/232 (28%), Positives = 81/232 (34%), Gaps = 50/232 (21%)
Query: 71 GRGYTTHPLHGSDGEPETCPSLSPFRSTPG-----FNRFSLEPTLAR---------SFTH 116
GRG P + P + P + + PG R S E T+AR S
Sbjct: 89 GRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALS 148
Query: 117 AGARAGRASPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSGRGCRDSGA 176
AGAR + P P + +M +SRA ++ R PR EG +
Sbjct: 149 AGARRDTSGPTP-GTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHS 207
Query: 177 TY---PAGARRSLAEAERVGPK---------PLPEQERSGASGRCLP-APAAFSAAAP-- 221
T PA RR A P PL RSG S R P APA S P
Sbjct: 208 TTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKG 267
Query: 222 --ARRPPACLPEGEDA----------------PVAPPSSARPALPSFLLRPS 255
A RPP P +DA P APPS + P PS PS
Sbjct: 268 LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAP--PSLQTLPS 317
Score = 39.7 bits (91), Expect = 0.004
Identities = 51/156 (32%), Positives = 61/156 (39%), Gaps = 22/156 (14%)
Query: 182 ARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPACLPEGEDAPVA--- 238
A R L A VG KPL E+ G G +P A + RPPA GE AP A
Sbjct: 43 ALRVLGAAGAVGRKPLAERA-GGIGGATIPESAPRAGPTRTSRPPAS-GRGERAPPAKNT 100
Query: 239 -PPSSARPALPSFLLRPSGYLAARRQRGPGSGAAETGFRGSCAGCGRGLRIQSHPGTTHL 297
P + P S RP G L Q+G A ET RG + P + L
Sbjct: 101 SPGPVSSPGRASGTTRP-GPLG---QKGLRISAEETVARG---------KATEAPKRSAL 147
Query: 298 HQGASFTSSEPLSGISSP---RGVWASGCLAPFPQP 330
GA +S P G SP R A+G P+P
Sbjct: 148 SAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRP 183
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 42.0 bits (97), Expect = 8e-04
Identities = 65/274 (23%), Positives = 91/274 (33%), Gaps = 43/274 (15%)
Query: 55 PTAHPPLPKGNALLLQGRGYTTHPLHGSDGEPETCPSLSPFRSTPG-----FNRFSLEPT 109
P + PP GRG P + P + P + + PG R S E T
Sbjct: 90 PASRPPA--------SGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEET 141
Query: 110 LAR---------SFTHAGARAGRASPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRS 160
+AR S AGAR + P P + +M +SRA ++ R PR
Sbjct: 142 VARGKATEAPKRSALSAGARRDTSGPTP-GTPSPAMARRSRAAGTEVGLPRPAPSARPRP 200
Query: 161 GYEGDGSGRGCRDSGATYPAGARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAA 220
EG P + S +E P P + S G PA + S++A
Sbjct: 201 PTEG--------------PRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSA 246
Query: 221 PARRPPACLPEGEDAPVAPPSSARPALPS----FLLRPSGYLAARRQRGPGSGAAETGFR 276
PA G A P + A P+ P LRP R+ P G +
Sbjct: 247 TPLSSPA--RSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPL 304
Query: 277 GSCAGCGRGLRIQSHPGTTHLHQGASFTSSEPLS 310
+ + G R P A+ S PL+
Sbjct: 305 ATPSPSGTKARPVPPPDNAATPLPATLPPSPPLA 338
>gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]
Length = 1505
Score = 41.6 bits (96), Expect = 0.001
Identities = 47/144 (32%), Positives = 57/144 (39%), Gaps = 22/144 (15%)
Query: 119 ARAGRASP----EPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSGRGCRDS 174
AR+GRA+P + C + P S E + G + E PR + + S
Sbjct: 1324 ARSGRAAPSSEGDSCDGVEATEGPGSADTEEPKSQGEAEREEVPRPAEQTEPP-----PS 1378
Query: 175 GATYPAGARRSLAEAERV-GPKPLPEQERSGASGRCLPAPAA------FSAAAPARRPPA 227
G P AR E V GP PLP S AS APAA +AAAP P A
Sbjct: 1379 GTPGPDDARDDDHEGGPVEGPGPLP----SPASATATAAPAAPEDAATSAAAAPGEGPAA 1434
Query: 228 CLPEGEDAPVAPPSSARPALPSFL 251
P P SS+ P PS L
Sbjct: 1435 --PSSAPPPSNSSSSSAPRRPSSL 1456
>gi|21618325 forkhead box E1 [Homo sapiens]
Length = 373
Score = 41.6 bits (96), Expect = 0.001
Identities = 40/131 (30%), Positives = 49/131 (37%), Gaps = 18/131 (13%)
Query: 203 SGASGRCLPAPAAFSAAAPARRPPACLPEGEDAPVAPPSSARPALPSFLLRPSG-----Y 257
+ A+ A A F A PA RPP P A APPS A P + G
Sbjct: 168 AAAAAAAAAAAAIFPGAVPAARPP--YPGAVYAGYAPPSLAAPPPVYYPAASPGPCRVFG 225
Query: 258 LAARRQRGPGSGAAETGFRGSCAGCGRGLRIQSHPGTTHLHQGASFTSSEP------LSG 311
L R P G A +G GSCA G P TT +Q A T + P +
Sbjct: 226 LVPERPLSPELGPAPSGPGGSCAFASAGA-----PATTTGYQPAGCTGARPANPSAYAAA 280
Query: 312 ISSPRGVWASG 322
+ P G + G
Sbjct: 281 YAGPDGAYPQG 291
>gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens]
Length = 430
Score = 41.6 bits (96), Expect = 0.001
Identities = 59/216 (27%), Positives = 74/216 (34%), Gaps = 27/216 (12%)
Query: 92 LSPFRSTPGFNRFSLEPTLARSFTHAGARAGRASPEPCRRGAQSMEPQSRA--------W 143
L P +PG R P A R G+ S P GA + R
Sbjct: 23 LEPGCGSPGRGRRGPRPGPGDEAAPALGRRGKGSGGP-EAGADGLSRGERGPRRAAVPEL 81
Query: 144 ESQPADGRKQSREAPRSGYEGDGSGRGCRDSGATYPAGARRSLAEAERVGPKPLPEQERS 203
+QPA S A +G +G G G R SG + R + R P+P P
Sbjct: 82 SAQPAG----SPRASLAGSDGGGGGGSARSSGISLGYDQRHGSPRSGRSDPRPGPGPPSV 137
Query: 204 G---ASGRCLPAPAAFSAAAPARRPPAC-LPEGEDAPVAPPSSARPALPSFLLRPSGYLA 259
G +S L + + A A P AC P P P PALP R G A
Sbjct: 138 GSARSSVSSLGSRGSAGAYADFLPPGACPAPARSPEPAGPAPFPLPALPLPPGREGGPSA 197
Query: 260 ARR---------QRGPGSGAAETGFRGSCAGCGRGL 286
A R +R + A F G C CG G+
Sbjct: 198 AERRLEALTRELERALEARTARDYF-GICIKCGLGI 232
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 41.2 bits (95), Expect = 0.001
Identities = 63/220 (28%), Positives = 82/220 (37%), Gaps = 33/220 (15%)
Query: 55 PTAHPPLPKGNALLLQGRGYTTHPLHGSDGEPETCPSLSPFRSTPGFNRFSLEPTLARSF 114
P + PP PK T+ P G P P L P P N +
Sbjct: 381 PNSEPPTPK------TAWAETSRPPETEPGPPAPKPPLPPPHRGPAGN-----------W 423
Query: 115 THAGARAGRASPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSGRGCRDS 174
G R P PC+ A E + AW + RKQS E R R+
Sbjct: 424 GPPGDYPDRGGP-PCKPPAP--EDEDEAWRQR----RKQSSSEISLAVE---RARRRREE 473
Query: 175 GATYPAGARRSLAEAERVGPKPLPEQERSGASGRCLPA-PAAFSAAAPARRPPACLPEGE 233
RR+ A AE++ K L E+ GA + L A PAA AA PP +P+
Sbjct: 474 EERRMQEERRA-ACAEKL--KRL--DEKFGAPDKRLKAEPAAPPAAPSTPAPPPAVPKEL 528
Query: 234 DAPVAPPSSARPALPSFLLRPSGYLAARRQRGPGSGAAET 273
AP APP ++ P + P+ A+ PG AA T
Sbjct: 529 PAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVAAAPT 568
Score = 32.3 bits (72), Expect = 0.64
Identities = 60/253 (23%), Positives = 85/253 (33%), Gaps = 52/253 (20%)
Query: 59 PPLPKGNALLLQGRGYTTHPLHGSDGEPETC-----PSLSPFRSTPGFNRFSL------- 106
PP+P L G+ P +G+ G P + P P PG + +
Sbjct: 826 PPVPPPPPYLASYPGF---PENGAPGPPISRFPLEEPGPRPLPWPPGSDEVAKIQTPPPK 882
Query: 107 -EPTLARSFTHAGARAGRASPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGD 165
EP + G AGR G Q P R + R ++R PR G
Sbjct: 883 KEPPKEETAQLTGPEAGRKPARGVGSGGQGPPPPRR-------ESRTETRWGPRPGSSRR 935
Query: 166 G-----SGRGCRDSGATYPAGARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAA 220
G G R +G P + E + PKPL + + +
Sbjct: 936 GIPPEEPGAPPRRAG---PIKKPPPPTKVEELPPKPLEQGDET---------------PK 977
Query: 221 PARRPPACLPEGE-DAPVAPPSSARPALPSFLLRPSGY--LAARRQRGPGSG---AAETG 274
P + P + +G+ P P + + L R Y + RG G G A G
Sbjct: 978 PPKPDPLKITKGKLGGPKETPPNGNLSPAPRLRRDYSYERVGPTSCRGRGRGEYFARGRG 1037
Query: 275 FRGSCAGCGRGLR 287
FRG+ G GRG R
Sbjct: 1038 FRGTYGGRGRGAR 1050
Score = 28.5 bits (62), Expect = 9.3
Identities = 41/182 (22%), Positives = 59/182 (32%), Gaps = 18/182 (9%)
Query: 90 PSLSPFRSTPGFNRFSLEPTLARSFTHAGARAGRASPEPCRRGAQSMEPQSRAWESQPAD 149
P P S P EP A A+P G + S ++E+ P +
Sbjct: 531 PPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVE 590
Query: 150 GRKQSREAPRSGYE---------------GDGSG--RGCRDSGATYPAGARRSLAEAERV 192
+ S+E P E GDG G R G YP + +R
Sbjct: 591 PQLPSKEGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQ 650
Query: 193 GPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPACLPEGEDAPVAPPSSARPALPSFLL 252
+ L +Q++ + A + P+ P L AP APP + P L
Sbjct: 651 QQEQLLKQQQQHQWQQHQQGSAPPTPVPPSPPQPVTL-GAVPAPQAPPPPPKALYPGALG 709
Query: 253 RP 254
RP
Sbjct: 710 RP 711
>gi|239757729 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 40.8 bits (94), Expect = 0.002
Identities = 55/190 (28%), Positives = 72/190 (37%), Gaps = 31/190 (16%)
Query: 61 LPKGNALLLQGRGYTTHPLHGSDGEPETCPSLSPFRSTPGFNRFSLEPTLARSFTHAGAR 120
+P L L G+ Y P S P+ L+P R P + R S +P L
Sbjct: 1 MPTERILNLYGKNYK--PQDQSPPSPQRDSGLTPERDRPDWPR-SFKPPL---------- 47
Query: 121 AGRASPEPCRRGAQSMEPQSRAWESQPAD-GRKQSREAPRSGYEGDGSGRGCRDSG-ATY 178
SPE +G ++ PQ+ A P D G +PR G G + C G
Sbjct: 48 ----SPE---KGTKASGPQTSA--PSPRDPGLHTPPCSPRRGRRGRPTQEVCPAPGPCAQ 98
Query: 179 PAGARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPACLPEGEDAPVA 238
PAG E+ +P P R + PA APARRPPA +P P
Sbjct: 99 PAGTCPPPPTGEK---QPRPHGFRCSHGSKRAPA----LLGAPARRPPAHIPAQPRWPRL 151
Query: 239 PPSSARPALP 248
P + R A P
Sbjct: 152 QPVAKRRARP 161
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 40.8 bits (94), Expect = 0.002
Identities = 58/233 (24%), Positives = 79/233 (33%), Gaps = 43/233 (18%)
Query: 55 PTAHPPLPKGNALLLQGRGYTTHPLHGSDGEPETCPSLSPFRSTPG-----FNRFSLEPT 109
P + PP GRG P + P + P + + PG R S E T
Sbjct: 90 PASRPPA--------SGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEET 141
Query: 110 LAR---------SFTHAGARAGRASPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRS 160
+AR S AGAR + P P + +M +SRA ++ R PR
Sbjct: 142 VARGKATEAPKRSALSAGARRDTSGPTP-GTPSPAMARRSRAAGTEVGLPRPAPSARPRP 200
Query: 161 GYEGDGSGRGCRDSGATYPAGARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAA 220
EG P + S +E P P + S G PA + S++A
Sbjct: 201 PTEG--------------PRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSA 246
Query: 221 PARRPPACLPEGEDAPVAPPSSARPALPS----FLLRPSGYLAARRQRGPGSG 269
PA G A P + A P+ P LRP R+ P G
Sbjct: 247 TPLSSPA--RSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALG 297
>gi|239752222 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 40.8 bits (94), Expect = 0.002
Identities = 55/190 (28%), Positives = 72/190 (37%), Gaps = 31/190 (16%)
Query: 61 LPKGNALLLQGRGYTTHPLHGSDGEPETCPSLSPFRSTPGFNRFSLEPTLARSFTHAGAR 120
+P L L G+ Y P S P+ L+P R P + R S +P L
Sbjct: 1 MPTERILNLYGKNYK--PQDQSPPSPQRDSGLTPERDRPDWPR-SFKPPL---------- 47
Query: 121 AGRASPEPCRRGAQSMEPQSRAWESQPAD-GRKQSREAPRSGYEGDGSGRGCRDSG-ATY 178
SPE +G ++ PQ+ A P D G +PR G G + C G
Sbjct: 48 ----SPE---KGTKASGPQTSA--PSPRDPGLHTPPCSPRRGRRGRPTQEVCPAPGPCAQ 98
Query: 179 PAGARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPACLPEGEDAPVA 238
PAG E+ +P P R + PA APARRPPA +P P
Sbjct: 99 PAGTCPPPPTGEK---QPRPHGFRCSHGSKRAPA----LLGAPARRPPAHIPAQPRWPRL 151
Query: 239 PPSSARPALP 248
P + R A P
Sbjct: 152 QPVAKRRARP 161
>gi|239746743 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 40.8 bits (94), Expect = 0.002
Identities = 55/190 (28%), Positives = 72/190 (37%), Gaps = 31/190 (16%)
Query: 61 LPKGNALLLQGRGYTTHPLHGSDGEPETCPSLSPFRSTPGFNRFSLEPTLARSFTHAGAR 120
+P L L G+ Y P S P+ L+P R P + R S +P L
Sbjct: 1 MPTERILNLYGKNYK--PQDQSPPSPQRDSGLTPERDRPDWPR-SFKPPL---------- 47
Query: 121 AGRASPEPCRRGAQSMEPQSRAWESQPAD-GRKQSREAPRSGYEGDGSGRGCRDSG-ATY 178
SPE +G ++ PQ+ A P D G +PR G G + C G
Sbjct: 48 ----SPE---KGTKASGPQTSA--PSPRDPGLHTPPCSPRRGRRGRPTQEVCPAPGPCAQ 98
Query: 179 PAGARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPACLPEGEDAPVA 238
PAG E+ +P P R + PA APARRPPA +P P
Sbjct: 99 PAGTCPPPPTGEK---QPRPHGFRCSHGSKRAPA----LLGAPARRPPAHIPAQPRWPRL 151
Query: 239 PPSSARPALP 248
P + R A P
Sbjct: 152 QPVAKRRARP 161
>gi|46409434 hypothetical protein LOC388759 [Homo sapiens]
Length = 237
Score = 40.8 bits (94), Expect = 0.002
Identities = 53/186 (28%), Positives = 66/186 (35%), Gaps = 30/186 (16%)
Query: 110 LARSFTHAGARAGRASPEPCRRGAQSMEPQSRAWESQPADGRKQSREAPRSGYEGDGSGR 169
LA F AR R C QS R P + + P + GR
Sbjct: 39 LAFDFLEPRARGQRGGSGGC----QSTRAAERTRPPHPPNAVLLLQPEPSLTW---AQGR 91
Query: 170 GCRDSGATYPAGARRSLAEAERV--GPKPLPEQERSGASGRCLPAPAAFSAAAPARRPPA 227
GCR + PA A RS + R + L EQ++ A P P A PA P+
Sbjct: 92 GCRGHFRSLPAAASRSGSRTLRCASSDRSLREQKQRRAG----PDPTPSPAPPPAGPRPS 147
Query: 228 CLPEGEDAPVAPPSSARPALPSFLLRPSGYLAARRQRGPGSGAA--------ETGFRGSC 279
G AP AP R A ++ L+ Q GPG A TG G+
Sbjct: 148 PGSLGPSAPAAP----RTARGAYELQ-----GGASQDGPGQAAVGATPTTGPGTGGEGAL 198
Query: 280 AGCGRG 285
GCG G
Sbjct: 199 LGCGSG 204
>gi|194272140 dendrin [Homo sapiens]
Length = 711
Score = 40.4 bits (93), Expect = 0.002
Identities = 49/167 (29%), Positives = 66/167 (39%), Gaps = 23/167 (13%)
Query: 111 ARSFTH--AGARAGRASPEPCRRGAQSMEPQSRAWESQP-ADGR---KQSREAPRSGYEG 164
AR F + G R G P P R A + ++ W + P A+ R ++ R+A E
Sbjct: 63 ARGFQNRTCGPRPGSPQPPPRRPWASRVLQEATNWRAGPLAEVRAREQEKRKAASQEREA 122
Query: 165 DGSGRGCRDSGATYPAGARRSLAEAERVGPKPLPEQERSGASGRCLPAPAAFSAAAPARR 224
+ R R +G GARRS R P+ P + LPAP AP R
Sbjct: 123 KETERKRRKAG-----GARRSPPGRPRPEPRNAPRVAQLAG----LPAPLRPERLAPVGR 173
Query: 225 PPACLPEGEDAP----VAPPSSARPALPSF----LLRPSGYLAARRQ 263
P + + P P RP PS+ LLR S A RR+
Sbjct: 174 APRPSAQPQSDPGSAWAGPWGGRRPGPPSYEAHLLLRGSAGTAPRRR 220
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,786,833
Number of Sequences: 37866
Number of extensions: 1203072
Number of successful extensions: 6334
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 743
Number of HSP's that attempted gapping in prelim test: 5345
Number of HSP's gapped (non-prelim): 1581
length of query: 347
length of database: 18,247,518
effective HSP length: 103
effective length of query: 244
effective length of database: 14,347,320
effective search space: 3500746080
effective search space used: 3500746080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.