LOC100288092 17009

Name: LOC100288092	Sequence: fasta or formatted (133aa)		NCBI GI: 239741851
Description: PREDICTED: hypothetical protein XP_002342325		Not currently referenced in the text
Other entries for this name: alt prot {131aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.5 14 2 C cysteine 0.8 1 1 D aspartate 3.0 4 1 E glutamate 3.8 5 1 F phenylalanine 0.8 1 1 G glycine 9.0 12 1 H histidine 3.8 5 1 I isoleucine 1.5 2 1 K lysine 5.3 7 1 L leucine 6.8 9 1 M methionine 0.8 1 1 N asparagine 3.8 5 1 P proline 9.8 13 2 Q glutamine 3.8 5 1 R arginine 15.8 21 3 S serine 11.3 15 3 T threonine 3.0 4 2 V valine 5.3 7 1 W tryptophan 1.5 2 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342325 LOC100292637 0.960 PREDICTED: hypothetical protein LOC100288092 0.960 PREDICTED: hypothetical protein SRRM2 0.065 splicing coactivator subunit SRm300 SRRM1 0.040 serine/arginine repetitive matrix 1 LOC100288573 0.032 PREDICTED: hypothetical protein XP_002343799 COL5A2 0.032 alpha 2 type V collagen preproprotein MARVELD3 0.028 MARVEL domain containing 3 isoform 1 MARVELD3 0.028 MARVEL domain containing 3 isoform 2 TMCC2 0.028 transmembrane and coiled-coil domain family 2 KCNA5 0.024 potassium voltage-gated channel, shaker-related subf... LOC100170229 0.020 hypothetical protein LOC100170229 LOC100292909 0.020 PREDICTED: hypothetical protein ARTN 0.020 neurotrophic factor artemin isoform 2 ARTN 0.020 neurotrophic factor artemin isoform 1 precursor [Ho... ARTN 0.020 neurotrophic factor artemin isoform 3 precursor [Ho... ARTN 0.020 neurotrophic factor artemin isoform 1 precursor [Ho... ARTN 0.020 neurotrophic factor artemin isoform 3 precursor [Ho... LOC100129002 0.020 PREDICTED: hypothetical protein LOC100293818 0.020 PREDICTED: hypothetical protein LOC100128747 0.020 PREDICTED: hypothetical protein COL8A2 0.020 collagen, type VIII, alpha 2 HP1BP3 0.020 HP1-BP74 COL8A1 0.020 alpha 1 type VIII collagen precursor COL8A1 0.020 alpha 1 type VIII collagen precursor LOC100293055 0.020 PREDICTED: similar to COL22A1 protein LOC728846 0.020 PREDICTED: hypothetical protein SHROOM3 0.020 shroom family member 3 protein COL4A3 0.020 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.020 alpha 3 type IV collagen isoform 4 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.