SEC31A 1727

Name: SEC31A	Sequence: fasta or formatted (1205aa)		NCBI GI: 116256340
Description: SEC31 homolog A isoform 3		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [1106aa] SEC31 homolog A isoform 4 alt prot [1220aa] SEC31 homolog A isoform 1 alt prot [1220aa] SEC31 homolog A isoform 1 alt prot [1181aa] SEC31 homolog A isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 100 3 C cysteine 1.4 17 1 D aspartate 4.7 57 2 E glutamate 4.6 56 2 F phenylalanine 3.2 38 1 G glycine 6.6 80 2 H histidine 2.7 32 2 I isoleucine 5.1 61 2 K lysine 5.4 65 4 L leucine 9.0 108 3 M methionine 2.2 27 1 N asparagine 4.4 53 2 P proline 8.8 106 4 Q glutamine 7.4 89 5 R arginine 3.2 39 2 S serine 8.9 107 3 T threonine 5.4 65 2 V valine 5.1 61 2 W tryptophan 1.3 16 1 Y tyrosine 2.3 28 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SEC31 homolog A isoform 3 SEC31A 0.996 SEC31 homolog A isoform 1 SEC31A 0.996 SEC31 homolog A isoform 1 SEC31A 0.958 SEC31 homolog A isoform 2 SEC31A 0.763 SEC31 homolog A isoform 4 SEC31B 0.427 SEC31 homolog B NCOA6 0.020 nuclear receptor coactivator 6 SFPQ 0.019 splicing factor proline/glutamine rich (polypyrimidin... RERE 0.017 atrophin-1 like protein isoform b RERE 0.017 atrophin-1 like protein isoform a RERE 0.017 atrophin-1 like protein isoform a FLJ22184 0.017 PREDICTED: hypothetical protein LOC80164 PRB2 0.017 proline-rich protein BstNI subfamily 2 ATXN2 0.017 ataxin 2 ARHGAP17 0.017 nadrin isoform 1 POLR2A 0.016 DNA-directed RNA polymerase II A ARHGAP17 0.016 nadrin isoform 2 BRD4 0.015 bromodomain-containing protein 4 isoform long WDR59 0.015 WD repeat domain 59 EP300 0.014 E1A binding protein p300 RBBP4 0.014 retinoblastoma binding protein 4 isoform c RBBP4 0.014 retinoblastoma binding protein 4 isoform b RBBP4 0.014 retinoblastoma binding protein 4 isoform a FLJ22184 0.014 PREDICTED: hypothetical protein FLJ22184 PRB1 0.014 proline-rich protein BstNI subfamily 1 isoform 1 pre... WSB1 0.014 WD repeat and SOCS box-containing 1 isoform 1 FLJ22184 0.014 PREDICTED: hypothetical protein FLJ22184 WIPF3 0.014 WAS/WASL interacting protein family, member 3 [Homo... DIAPH1 0.013 diaphanous 1 isoform 2 DIAPH1 0.013 diaphanous 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.