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Search of human proteins with 116235482
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116235482 glycosyltransferase-like 1B [Homo sapiens]
(721 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116235482 glycosyltransferase-like 1B [Homo sapiens] 1495 0.0
gi|19924141 like-glycosyltransferase [Homo sapiens] 940 0.0
gi|4758664 like-glycosyltransferase [Homo sapiens] 940 0.0
gi|5802984 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltrans... 99 1e-20
gi|112181295 hypothetical protein LOC152002 [Homo sapiens] 80 5e-15
gi|122937187 glycosyltransferase 8 domain containing 4 [Homo sap... 76 1e-13
gi|153791276 glycosyltransferase 8 domain containing 3 isoform 2... 71 3e-12
gi|153791362 glycosyltransferase 8 domain containing 3 isoform 1... 66 1e-10
gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo ... 42 0.003
gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo ... 42 0.003
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 39 0.013
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens] 38 0.029
gi|47778921 alpha 1 type XIX collagen precursor [Homo sapiens] 37 0.064
gi|18959210 WIRE protein [Homo sapiens] 37 0.084
gi|30840978 neuroligin 2 [Homo sapiens] 36 0.11
gi|27262645 ataxin 2 related protein isoform B [Homo sapiens] 36 0.11
gi|27262653 ataxin 2 related protein isoform E [Homo sapiens] 36 0.11
gi|27262649 ataxin 2 related protein isoform C [Homo sapiens] 36 0.11
gi|27262647 ataxin 2 related protein isoform A [Homo sapiens] 36 0.11
gi|27262651 ataxin 2 related protein isoform D [Homo sapiens] 36 0.11
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 36 0.14
gi|22027541 programmed cell death 7 [Homo sapiens] 35 0.19
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens] 35 0.24
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 35 0.24
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 35 0.24
gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 35 0.32
gi|98961138 ZXD family zinc finger C isoform 2 [Homo sapiens] 35 0.32
gi|98961133 ZXD family zinc finger C isoform 1 [Homo sapiens] 35 0.32
gi|145275195 Cdk5 and Abl enzyme substrate 2 [Homo sapiens] 35 0.32
gi|33356148 formin-like 1 [Homo sapiens] 35 0.32
>gi|116235482 glycosyltransferase-like 1B [Homo sapiens]
Length = 721
Score = 1495 bits (3870), Expect = 0.0
Identities = 721/721 (100%), Positives = 721/721 (100%)
Query: 1 MLPRGRPRALGAAALLLLLLLLGFLLFGGDLGCERREPGGRAGAPGCFPGPLMPRVPPDG 60
MLPRGRPRALGAAALLLLLLLLGFLLFGGDLGCERREPGGRAGAPGCFPGPLMPRVPPDG
Sbjct: 1 MLPRGRPRALGAAALLLLLLLLGFLLFGGDLGCERREPGGRAGAPGCFPGPLMPRVPPDG 60
Query: 61 RLRRAAALDGDPGAGPGDHNRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSML 120
RLRRAAALDGDPGAGPGDHNRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSML
Sbjct: 61 RLRRAAALDGDPGAGPGDHNRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSML 120
Query: 121 FYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYG 180
FYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYG
Sbjct: 121 FYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYG 180
Query: 181 LMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIGLVENQSDWYLGNL 240
LMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIGLVENQSDWYLGNL
Sbjct: 181 LMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIGLVENQSDWYLGNL 240
Query: 241 WKNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSLPATSLADQDIFNAV 300
WKNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSLPATSLADQDIFNAV
Sbjct: 241 WKNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSLPATSLADQDIFNAV 300
Query: 301 IKEHPGLVQRLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKLRVKNKHVEFFRNFY 360
IKEHPGLVQRLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKLRVKNKHVEFFRNFY
Sbjct: 301 IKEHPGLVQRLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKLRVKNKHVEFFRNFY 360
Query: 361 LTFLEYDGNLLRRELFVCPSQPPPGAEQLQQALAQLDEEDPCFEFRQQQLTVHRVHVTFL 420
LTFLEYDGNLLRRELFVCPSQPPPGAEQLQQALAQLDEEDPCFEFRQQQLTVHRVHVTFL
Sbjct: 361 LTFLEYDGNLLRRELFVCPSQPPPGAEQLQQALAQLDEEDPCFEFRQQQLTVHRVHVTFL 420
Query: 421 PHEPPPPRPHDVTLVAQLSMDRLQMLEALCRHWPGPMSLALYLTDAEAQQFLHFVEASPV 480
PHEPPPPRPHDVTLVAQLSMDRLQMLEALCRHWPGPMSLALYLTDAEAQQFLHFVEASPV
Sbjct: 421 PHEPPPPRPHDVTLVAQLSMDRLQMLEALCRHWPGPMSLALYLTDAEAQQFLHFVEASPV 480
Query: 481 LAARQDVAYHVVYREGPLYPVNQLRNVALAQALTPYVFLSDIDFLPAYSLYDYLRASIEQ 540
LAARQDVAYHVVYREGPLYPVNQLRNVALAQALTPYVFLSDIDFLPAYSLYDYLRASIEQ
Sbjct: 481 LAARQDVAYHVVYREGPLYPVNQLRNVALAQALTPYVFLSDIDFLPAYSLYDYLRASIEQ 540
Query: 541 LGLGSRRKAALVVPAFETLRYRFSFPHSKVELLALLDAGTLYTFRYHEWPRGHAPTDYAR 600
LGLGSRRKAALVVPAFETLRYRFSFPHSKVELLALLDAGTLYTFRYHEWPRGHAPTDYAR
Sbjct: 541 LGLGSRRKAALVVPAFETLRYRFSFPHSKVELLALLDAGTLYTFRYHEWPRGHAPTDYAR 600
Query: 601 WREAQAPYRVQWAANYEPYVVVPRDCPRYDPRFVGFGWNKVAHIVELDAQEYELLVLPEA 660
WREAQAPYRVQWAANYEPYVVVPRDCPRYDPRFVGFGWNKVAHIVELDAQEYELLVLPEA
Sbjct: 601 WREAQAPYRVQWAANYEPYVVVPRDCPRYDPRFVGFGWNKVAHIVELDAQEYELLVLPEA 660
Query: 661 FTIHLPHAPSLDISRFRSSPTYRDCLQALKDEFHQDLSRHHGAAALKYLPALQQPQSPAR 720
FTIHLPHAPSLDISRFRSSPTYRDCLQALKDEFHQDLSRHHGAAALKYLPALQQPQSPAR
Sbjct: 661 FTIHLPHAPSLDISRFRSSPTYRDCLQALKDEFHQDLSRHHGAAALKYLPALQQPQSPAR 720
Query: 721 G 721
G
Sbjct: 721 G 721
>gi|19924141 like-glycosyltransferase [Homo sapiens]
Length = 756
Score = 940 bits (2429), Expect = 0.0
Identities = 448/666 (67%), Positives = 535/666 (80%), Gaps = 11/666 (1%)
Query: 55 RVPPDGRLRRAAALDGDPGAGPGDH--------NRSDCGPQPPPPPKCELLHVAIVCAGH 106
R P R + + G G ++ N S+CG QP KCE +HVAIVCAG+
Sbjct: 89 RAPSHRRGNHSKTYSMEEGTGDSENLRAGIVAGNSSECGQQPVVE-KCETIHVAIVCAGY 147
Query: 107 NSSRDVITLVKSMLFYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQ 166
N+SRDV+TLVKS+LF+R+NPLH HL+ D++A IL TLF TWMVPAVRV FY+AD+LK +
Sbjct: 148 NASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQILATLFQTWMVPAVRVDFYNADELKSE 207
Query: 167 VSWIPNKHYSGLYGLMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAI 226
VSWIPNKHYSG+YGLMKLVL LPA L RVIVLDTD+TFA+DI+ELWA+F F Q +
Sbjct: 208 VSWIPNKHYSGIYGLMKLVLTKTLPANLERVIVLDTDITFATDIAELWAVFHKFKGQQVL 267
Query: 227 GLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSL 286
GLVENQSDWYLGNLWKNHRPWPALGRG+NTGVILL LD+LR+ WEQMWRLTA REL+ +
Sbjct: 268 GLVENQSDWYLGNLWKNHRPWPALGRGYNTGVILLLLDKLRKMKWEQMWRLTAERELMGM 327
Query: 287 PATSLADQDIFNAVIKEHPGLVQRLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKL 346
+TSLADQDIFNAVIK++P LV +LPC WNVQLSDHT +E+CY + SDLKVIHWNSPKKL
Sbjct: 328 LSTSLADQDIFNAVIKQNPFLVYQLPCFWNVQLSDHTRSEQCYRDVSDLKVIHWNSPKKL 387
Query: 347 RVKNKHVEFFRNFYLTFLEYDGNLLRRELFVCPSQPPPGAEQLQQALAQLDEEDPCFEFR 406
RVKNKHVEFFRN YLTFLEYDGNLLRRELF CPS+ +E LQ+ L++LDE+D C+EFR
Sbjct: 388 RVKNKHVEFFRNLYLTFLEYDGNLLRRELFGCPSEADVNSENLQKQLSELDEDDLCYEFR 447
Query: 407 QQQLTVHRVHVTFLPHE-PPPPRPHDVTLVAQLSMDRLQMLEALCRHWPGPMSLALYLTD 465
+++ TVHR H+ FL +E P DVTLVAQLSMDRLQMLEA+C+HW GP+SLALYL+D
Sbjct: 448 RERFTVHRTHLYFLHYEYEPAADSTDVTLVAQLSMDRLQMLEAICKHWEGPISLALYLSD 507
Query: 466 AEAQQFLHFVEASPVLAARQDVAYHVVYREGPLYPVNQLRNVALAQALTPYVFLSDIDFL 525
AEAQQFL + + S VL +R +V YH+VY+EG YPVN LRNVA+ TPY+FLSDIDFL
Sbjct: 508 AEAQQFLRYAQGSEVLMSRHNVGYHIVYKEGQFYPVNLLRNVAMKHISTPYMFLSDIDFL 567
Query: 526 PAYSLYDYLRASIEQLGLGSRRKAALVVPAFETLRYRFSFPHSKVELLALLDAGTLYTFR 585
P Y LY+YLR S+ QL L + +K A++VPAFETLRYR SFP SK ELL++LD GTL+TFR
Sbjct: 568 PMYGLYEYLRKSVIQLDLANTKK-AMIVPAFETLRYRLSFPKSKAELLSMLDMGTLFTFR 626
Query: 586 YHEWPRGHAPTDYARWREAQAPYRVQWAANYEPYVVVPRDCPRYDPRFVGFGWNKVAHIV 645
YH W +GHAPT++A+WR A PYRV+W A++EPYVVV RDCP YD RFVGFGWNKVAHI+
Sbjct: 627 YHVWTKGHAPTNFAKWRTATTPYRVEWEADFEPYVVVRRDCPEYDRRFVGFGWNKVAHIM 686
Query: 646 ELDAQEYELLVLPEAFTIHLPHAPSLDISRFRSSPTYRDCLQALKDEFHQDLSRHHGAAA 705
ELD QEYE +VLP A+ IH+PHAPS DI++FRS+ YR CL+ LK+EF QD+SR +G AA
Sbjct: 687 ELDVQEYEFIVLPNAYMIHMPHAPSFDITKFRSNKQYRICLKTLKEEFQQDMSRRYGFAA 746
Query: 706 LKYLPA 711
LKYL A
Sbjct: 747 LKYLTA 752
>gi|4758664 like-glycosyltransferase [Homo sapiens]
Length = 756
Score = 940 bits (2429), Expect = 0.0
Identities = 448/666 (67%), Positives = 535/666 (80%), Gaps = 11/666 (1%)
Query: 55 RVPPDGRLRRAAALDGDPGAGPGDH--------NRSDCGPQPPPPPKCELLHVAIVCAGH 106
R P R + + G G ++ N S+CG QP KCE +HVAIVCAG+
Sbjct: 89 RAPSHRRGNHSKTYSMEEGTGDSENLRAGIVAGNSSECGQQPVVE-KCETIHVAIVCAGY 147
Query: 107 NSSRDVITLVKSMLFYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQ 166
N+SRDV+TLVKS+LF+R+NPLH HL+ D++A IL TLF TWMVPAVRV FY+AD+LK +
Sbjct: 148 NASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQILATLFQTWMVPAVRVDFYNADELKSE 207
Query: 167 VSWIPNKHYSGLYGLMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAI 226
VSWIPNKHYSG+YGLMKLVL LPA L RVIVLDTD+TFA+DI+ELWA+F F Q +
Sbjct: 208 VSWIPNKHYSGIYGLMKLVLTKTLPANLERVIVLDTDITFATDIAELWAVFHKFKGQQVL 267
Query: 227 GLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSL 286
GLVENQSDWYLGNLWKNHRPWPALGRG+NTGVILL LD+LR+ WEQMWRLTA REL+ +
Sbjct: 268 GLVENQSDWYLGNLWKNHRPWPALGRGYNTGVILLLLDKLRKMKWEQMWRLTAERELMGM 327
Query: 287 PATSLADQDIFNAVIKEHPGLVQRLPCVWNVQLSDHTLAERCYSEASDLKVIHWNSPKKL 346
+TSLADQDIFNAVIK++P LV +LPC WNVQLSDHT +E+CY + SDLKVIHWNSPKKL
Sbjct: 328 LSTSLADQDIFNAVIKQNPFLVYQLPCFWNVQLSDHTRSEQCYRDVSDLKVIHWNSPKKL 387
Query: 347 RVKNKHVEFFRNFYLTFLEYDGNLLRRELFVCPSQPPPGAEQLQQALAQLDEEDPCFEFR 406
RVKNKHVEFFRN YLTFLEYDGNLLRRELF CPS+ +E LQ+ L++LDE+D C+EFR
Sbjct: 388 RVKNKHVEFFRNLYLTFLEYDGNLLRRELFGCPSEADVNSENLQKQLSELDEDDLCYEFR 447
Query: 407 QQQLTVHRVHVTFLPHE-PPPPRPHDVTLVAQLSMDRLQMLEALCRHWPGPMSLALYLTD 465
+++ TVHR H+ FL +E P DVTLVAQLSMDRLQMLEA+C+HW GP+SLALYL+D
Sbjct: 448 RERFTVHRTHLYFLHYEYEPAADSTDVTLVAQLSMDRLQMLEAICKHWEGPISLALYLSD 507
Query: 466 AEAQQFLHFVEASPVLAARQDVAYHVVYREGPLYPVNQLRNVALAQALTPYVFLSDIDFL 525
AEAQQFL + + S VL +R +V YH+VY+EG YPVN LRNVA+ TPY+FLSDIDFL
Sbjct: 508 AEAQQFLRYAQGSEVLMSRHNVGYHIVYKEGQFYPVNLLRNVAMKHISTPYMFLSDIDFL 567
Query: 526 PAYSLYDYLRASIEQLGLGSRRKAALVVPAFETLRYRFSFPHSKVELLALLDAGTLYTFR 585
P Y LY+YLR S+ QL L + +K A++VPAFETLRYR SFP SK ELL++LD GTL+TFR
Sbjct: 568 PMYGLYEYLRKSVIQLDLANTKK-AMIVPAFETLRYRLSFPKSKAELLSMLDMGTLFTFR 626
Query: 586 YHEWPRGHAPTDYARWREAQAPYRVQWAANYEPYVVVPRDCPRYDPRFVGFGWNKVAHIV 645
YH W +GHAPT++A+WR A PYRV+W A++EPYVVV RDCP YD RFVGFGWNKVAHI+
Sbjct: 627 YHVWTKGHAPTNFAKWRTATTPYRVEWEADFEPYVVVRRDCPEYDRRFVGFGWNKVAHIM 686
Query: 646 ELDAQEYELLVLPEAFTIHLPHAPSLDISRFRSSPTYRDCLQALKDEFHQDLSRHHGAAA 705
ELD QEYE +VLP A+ IH+PHAPS DI++FRS+ YR CL+ LK+EF QD+SR +G AA
Sbjct: 687 ELDVQEYEFIVLPNAYMIHMPHAPSFDITKFRSNKQYRICLKTLKEEFQQDMSRRYGFAA 746
Query: 706 LKYLPA 711
LKYL A
Sbjct: 747 LKYLTA 752
>gi|5802984 UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 1 [Homo
sapiens]
Length = 415
Score = 99.4 bits (246), Expect = 1e-20
Identities = 90/322 (27%), Positives = 129/322 (40%), Gaps = 62/322 (19%)
Query: 429 PHDVTLVAQLSMDRLQMLEALCRHWPGPMSLALYLTDAEAQQF---LHFVEASPVLAARQ 485
P+DV L S+D L L L W GP+S++++ E Q L + +S R
Sbjct: 92 PNDVILATHASVDNLLHLSGLLERWEGPLSVSVFAATKEEAQLATVLAYALSSHCPDMRA 151
Query: 486 DVAYHVV----------------------------------------YREGP--LYPVNQ 503
VA H+V Y G YP N
Sbjct: 152 RVAMHLVCPSRYEAAVPDPREPGEFALLRSCQEVFDKLARVAQPGINYALGTNVSYPNNL 211
Query: 504 LRNVALAQALTPYVFLSDIDFLPAYSLYDYLRASIEQLGLGSRRKAALVVPAFETLRYRF 563
LRN+A A Y + D+D +P+ L+ LR ++Q ALVVPAFE R R
Sbjct: 212 LRNLAREGA--NYALVIDVDMVPSEGLWRGLREMLDQSNQWGG--TALVVPAFEIRRAR- 266
Query: 564 SFPHSKVELLALLDAGTLYTFRYHEWPRGHAPTDYARWREA------QAPYRVQWAANYE 617
P +K EL+ L G + F Y APT+Y+RW + Y V W +E
Sbjct: 267 RMPMNKNELVQLYQVGEVRPFYYGLCTPCQAPTNYSRWVNLPEESLLRPAYVVPWQDPWE 326
Query: 618 PYVVVPRDCPRYDPRFVGFGWNKVAHIVELDAQEYELLVLPEAFTIH------LPHAPSL 671
P+ V P +D RF +G+N+++ EL ++ VL E F +H L P
Sbjct: 327 PFYVAGGKVPTFDERFRQYGFNRISQACELHVAGFDFEVLNEGFLVHKGFKEALKFHPQK 386
Query: 672 DISRFRSSPTYRDCLQALKDEF 693
+ + YR Q LK ++
Sbjct: 387 EAENQHNKILYRQFKQELKAKY 408
>gi|112181295 hypothetical protein LOC152002 [Homo sapiens]
Length = 393
Score = 80.5 bits (197), Expect = 5e-15
Identities = 87/326 (26%), Positives = 136/326 (41%), Gaps = 63/326 (19%)
Query: 35 RREPGGRAGAPGCFPGPLMPRV-----PPDGRLRRAAALDGDPGAGPGDHNRSDCGPQPP 89
+R RAGAP P + P G +A +L+G GAGP D++
Sbjct: 53 KRLKEARAGAPAAPSPPALELARGSVAPAPGA--KAKSLEGG-GAGPVDYH--------- 100
Query: 90 PPPKCELLHVAIVCAGHNSSRD------VITLVKSMLFYRKNPLHLHLVTDAVARNILET 143
L + A HN++ + +L++ F L+LH V++ +R + +
Sbjct: 101 -------LLMMFTKAEHNAALQAKARVALRSLLRLAKFEAHEVLNLHFVSEEASREVAKG 153
Query: 144 LFHTWMVPAV----RVSFYHA----DQLKPQVSWIPNKHYSGLYG--------LMKLVLP 187
L + PA +V F+ D+L P V + KH+S G + + +
Sbjct: 154 LLRELLPPAAGFKCKVIFHDVAVLTDKLFPIVEAM-QKHFSAGLGTYYSDSIFFLSVAMH 212
Query: 188 SALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIGLVENQSDWYLGNLW--KNHR 245
+P E+ ++I LD D+ F ++I EL+ F F IG+ Y W ++
Sbjct: 213 QIMPKEILQIIQLDLDLKFKTNIRELFEEFDSFLPGAIIGIAREMQPVYRHTFWQFRHEN 272
Query: 246 PWPALG-------RGFNTGVILLRLDRLRQAGWEQMWRLTARRELLSLP-----ATSLAD 293
P +G GFN+GV+LL L+ +RQ+ RL ++ L L D
Sbjct: 273 PQTRVGGPPPEGLPGFNSGVMLLNLEAMRQSPLYS--RLLEPAQVQQLADKYHFRGHLGD 330
Query: 294 QDIFNAVIKEHPGLVQRLPCVWNVQL 319
QD F + EHP L L C WN QL
Sbjct: 331 QDFFTMIGMEHPKLFHVLDCTWNRQL 356
>gi|122937187 glycosyltransferase 8 domain containing 4 [Homo
sapiens]
Length = 443
Score = 76.3 bits (186), Expect = 1e-13
Identities = 94/378 (24%), Positives = 146/378 (38%), Gaps = 71/378 (18%)
Query: 13 AALLLLLLLLGFLLFGGDLGCERREPGGR----AGAPGCFPGPLMPRVPPDGRLRRAAAL 68
AA LLLL L LL L R EP A AP P P+ R P G L
Sbjct: 7 AAALLLLALAALLLALLSLRAGRAEPPALPARPASAPQRHPAPVPARWPGPGAL------ 60
Query: 69 DGDPGAGPGDHNRSDCGPQP----------------PPPPKC-------EL-LHVAIVCA 104
PGA PG R P+P P P+ EL +H+A+V
Sbjct: 61 ---PGASPGVRRRRPPRPRPRAGRRGAARLEKLARRPGEPRSFQAVLPPELWIHLAVVAC 117
Query: 105 GHNSSRDVITLVKSMLFYRKNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLK 164
G N + + ++KS + + + H+ T+ + + W + F H ++
Sbjct: 118 G-NRLEETLVMLKSAVLFSHRKIQFHIFTEDSLKPEFDKQLRQWPDSYTK-KFEH--RIY 173
Query: 165 PQVSWIPN-KHYSGLY---GLMKLVLPSALPAELARVIVLDTDVTFASDISELWALFAHF 220
P + N + + L+ +L LP L ++ ++ +DTDV F + ++W L F
Sbjct: 174 PITFSVGNPQEWKKLFKPCAAQRLFLPVILK-DVDSLLYVDTDVLFLRPVDDIWKLLRLF 232
Query: 221 SDTQAIGLVENQS----DWYLGNLWKNHRPWPALG-RGFNTGVILLRLDRLRQA------ 269
+ TQ + WY + + H P G G N+GV+L+ L R+R
Sbjct: 233 NSTQLAAMAPEHEIPKIGWY--SRFARH---PFYGSAGVNSGVMLMNLTRIRSTQFKNSM 287
Query: 270 -----GWEQMWRLTARRELLSLPATSLADQDIFNAVIKEHPGLVQRLPCVWNVQLSDHTL 324
WE M ++ A + DQD+ N + +P + PC WN +
Sbjct: 288 IPTGLAWEDMLYPLYQK---YKNAITWGDQDLLNIIFYFNPECLYVFPCQWNYRPDHCMY 344
Query: 325 AERC-YSEASDLKVIHWN 341
C +E + V+H N
Sbjct: 345 GSNCREAEHEGVSVLHGN 362
>gi|153791276 glycosyltransferase 8 domain containing 3 isoform 2
[Homo sapiens]
Length = 409
Score = 71.2 bits (173), Expect = 3e-12
Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 46/301 (15%)
Query: 64 RAAALDGDPGAGPGDHNRSDCGPQPPPPPKCELLHVAIVCAGHNSSRDVITLVKSMLFYR 123
R A + G P A PG +R QP E +H+A+V G + +T++KS + +
Sbjct: 58 RGAGVAG-PAAHPGVSDRYSLKIQP-----VEKMHLAVVACGERLE-ETMTMLKSAIIFS 110
Query: 124 KNPLHLHLVTDAVARNILETLFHTWMVPAVRVSFYHADQLKPQVSWIPNKHYSGLYGLMK 183
PL H+ + + + W SF P+++ + L K
Sbjct: 111 IKPLQFHIFAEDQLHHSFKGRLDNW-------SFLQTFNYTLYPITFPSENAAEWKKLFK 163
Query: 184 ------LVLPSALPAELARVIVLDTDVTFASDISELWALFAHFSDTQAIGLV----ENQS 233
L LP L E+ ++ +DTD+ F + ++W+L F+ TQ + E +
Sbjct: 164 PCASQRLFLPLILK-EVDSLLYVDTDILFLRPVDDIWSLLKKFNSTQIAAMAPEHEEPRI 222
Query: 234 DWYLGNLWKNHRPWPALGR-GFNTGVILLRLDRLR-----------QAGWEQMWRLTARR 281
WY N + H P G+ G N+GV+L+ + R+R + W + ++
Sbjct: 223 GWY--NRFARH---PYYGKTGVNSGVMLMNMTRMRRKYFKNDMTTVRLQWGDILMPLLKK 277
Query: 282 ELLSLPATSLADQDIFNAVIKEHPGLVQRLPCVWNVQLSDHTLAERCY-SEASDLKVIHW 340
L++ + DQD+ N V +P + PC WN + C +E + ++H
Sbjct: 278 YKLNI---TWGDQDLLNIVFFHNPESLFVFPCQWNYRPDHCIYGSNCQEAEEGGIFILHG 334
Query: 341 N 341
N
Sbjct: 335 N 335
>gi|153791362 glycosyltransferase 8 domain containing 3 isoform 1
[Homo sapiens]
Length = 440
Score = 66.2 bits (160), Expect = 1e-10
Identities = 61/270 (22%), Positives = 112/270 (41%), Gaps = 40/270 (14%)
Query: 95 ELLHVAIVCAGHNSSRDVITLVKSMLFYRKNPLHLHLVTDAVARNILETLFHTWMVPAVR 154
E +H+A+V G + +T++KS + + PL H+ + + + W
Sbjct: 114 EKMHLAVVACGERLE-ETMTMLKSAIIFSIKPLQFHIFAEDQLHHSFKGRLDNW------ 166
Query: 155 VSFYHADQLKPQVSWIPNKHYSGLYGLMK------LVLPSALPAELARVIVLDTDVTFAS 208
SF P+++ + L K L LP L E+ ++ +DTD+ F
Sbjct: 167 -SFLQTFNYTLYPITFPSENAAEWKKLFKPCASQRLFLPLILK-EVDSLLYVDTDILFLR 224
Query: 209 DISELWALFAHFSDTQAIGLV----ENQSDWYLGNLWKNHRPWPALGR-GFNTGVILLRL 263
+ ++W+L F+ TQ + E + WY N + H P G+ G N+GV+L+ +
Sbjct: 225 PVDDIWSLLKKFNSTQIAAMAPEHEEPRIGWY--NRFARH---PYYGKTGVNSGVMLMNM 279
Query: 264 DRLR-----------QAGWEQMWRLTARRELLSLPATSLADQDIFNAVIKEHPGLVQRLP 312
R+R + W + ++ L++ + DQD+ N V +P + P
Sbjct: 280 TRMRRKYFKNDMTTVRLQWGDILMPLLKKYKLNI---TWGDQDLLNIVFFHNPESLFVFP 336
Query: 313 CVWNVQLSDHTLAERCY-SEASDLKVIHWN 341
C WN + C +E + ++H N
Sbjct: 337 CQWNYRPDHCIYGSNCQEAEEGGIFILHGN 366
>gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo
sapiens]
Length = 261
Score = 41.6 bits (96), Expect = 0.003
Identities = 33/92 (35%), Positives = 37/92 (40%), Gaps = 15/92 (16%)
Query: 3 PRGRPRALGAAALLLLLLLLGFLLFGGDLGCERREPGGRAGAPGCFPGPLMPRVPPDGRL 62
P GRPR L+L+L+L L G RR GRAG G P PP G +
Sbjct: 155 PSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAP------APPTGSM 208
Query: 63 RRAAALDGDPGAGPGDHNRSDCGPQPPPPPKC 94
RA P A P H PPP P C
Sbjct: 209 -RAGPGPSSPSAAPTSH--------PPPSPAC 231
>gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo
sapiens]
Length = 261
Score = 41.6 bits (96), Expect = 0.003
Identities = 33/92 (35%), Positives = 37/92 (40%), Gaps = 15/92 (16%)
Query: 3 PRGRPRALGAAALLLLLLLLGFLLFGGDLGCERREPGGRAGAPGCFPGPLMPRVPPDGRL 62
P GRPR L+L+L+L L G RR GRAG G P PP G +
Sbjct: 155 PSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAP------APPTGSM 208
Query: 63 RRAAALDGDPGAGPGDHNRSDCGPQPPPPPKC 94
RA P A P H PPP P C
Sbjct: 209 -RAGPGPSSPSAAPTSH--------PPPSPAC 231
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 39.3 bits (90), Expect = 0.013
Identities = 29/87 (33%), Positives = 34/87 (39%), Gaps = 22/87 (25%)
Query: 28 GGDLGCERREPG------GRAGAPGCFPGPLMPRVPPD-----------GRLRRAAALDG 70
GG G + PG G G PG GP + PP G R + G
Sbjct: 635 GGPKGMQHFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGGPMRG 694
Query: 71 DPGAGPGDHNRSDCG-----PQPPPPP 92
PG GPG ++R G P PPPPP
Sbjct: 695 GPGPGPGPYHRGRGGRGGNEPPPPPPP 721
>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
Length = 159
Score = 38.1 bits (87), Expect = 0.029
Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 35 RREPGGRAGAPGCFPGPLMPRVPPDGRLRRAAALDGDPGAGPGDHNRSDCGPQPPPPP 92
RR PG + G G PL P + P G A A+ P GP S P PP PP
Sbjct: 79 RRSPGPQGGGGGDIASPLPPALQPRG----APAVPAAPSPGPLPARPSSPPPSPPSPP 132
>gi|47778921 alpha 1 type XIX collagen precursor [Homo sapiens]
Length = 1142
Score = 37.0 bits (84), Expect = 0.064
Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 13/66 (19%)
Query: 34 ERREPGGRAGAPGCFPGPLMPRVPPDGRLRRAAALDGDPGAG-----------PGDH-NR 81
E+ +PGG G PG PGP PP L LDG+PGA PG H +
Sbjct: 559 EKGDPGGIIGPPG-LPGPKGEAGPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVHGSP 617
Query: 82 SDCGPQ 87
D GPQ
Sbjct: 618 GDIGPQ 623
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 36.6 bits (83), Expect = 0.084
Identities = 32/105 (30%), Positives = 40/105 (38%), Gaps = 19/105 (18%)
Query: 36 REPGGRAGAPGCFPGPLMPR------VPPDGRLRRAAALDGDPGAGPGDHNRSDCGPQPP 89
R+P R AP P P + R PP R + G P +R+ GP PP
Sbjct: 316 RDPPSRGAAPP--PPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPPPPPSRTPAGPPPP 373
Query: 90 PPPKCELLHVAIVCAGHNSSRDVITLVKSMLFYRKNPLHLHLVTD 134
PPP N RD IT V+S L ++ H V D
Sbjct: 374 PPPPL-----------RNGHRDSITTVRSFLDDFESKYSFHPVED 407
>gi|30840978 neuroligin 2 [Homo sapiens]
Length = 835
Score = 36.2 bits (82), Expect = 0.11
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 39/123 (31%)
Query: 9 ALGAAALLLLLLLLGFLLFGGD----LGCERREPGGRAGAPGCFPGPLMP----RVPPDG 60
A+GA+ L L +L L + D L C R P G +G+ GPL+P +PP+
Sbjct: 681 AVGASLLFLNILAFAALYYKRDRRQELRCRRLSPPGGSGSGVPGGGPLLPAAGRELPPEE 740
Query: 61 -----RLRRAAALDGDPG-----AGPGDHN---------------------RSDCGPQPP 89
+L+R + DP A P D+ S GP PP
Sbjct: 741 ELVSLQLKRGGGVGADPAEALRPACPPDYTLALRRAPDDVPLLAPGALTLLPSGLGPPPP 800
Query: 90 PPP 92
PPP
Sbjct: 801 PPP 803
>gi|27262645 ataxin 2 related protein isoform B [Homo sapiens]
Length = 1062
Score = 36.2 bits (82), Expect = 0.11
Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 35 RREPGGRAGAPGCFPGPLMPRVPPDGRLRRAAALDGDPGAGPGDHNRSDCG---PQPPPP 91
RR PGG + G PGPL P G A+ G A R G PQPPPP
Sbjct: 25 RRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGPVAAAGSGLRRGAEGILAPQPPPP 84
>gi|27262653 ataxin 2 related protein isoform E [Homo sapiens]
Length = 1044
Score = 36.2 bits (82), Expect = 0.11
Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 35 RREPGGRAGAPGCFPGPLMPRVPPDGRLRRAAALDGDPGAGPGDHNRSDCG---PQPPPP 91
RR PGG + G PGPL P G A+ G A R G PQPPPP
Sbjct: 25 RRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGPVAAAGSGLRRGAEGILAPQPPPP 84
>gi|27262649 ataxin 2 related protein isoform C [Homo sapiens]
Length = 1097
Score = 36.2 bits (82), Expect = 0.11
Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 35 RREPGGRAGAPGCFPGPLMPRVPPDGRLRRAAALDGDPGAGPGDHNRSDCG---PQPPPP 91
RR PGG + G PGPL P G A+ G A R G PQPPPP
Sbjct: 25 RRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGPVAAAGSGLRRGAEGILAPQPPPP 84
>gi|27262647 ataxin 2 related protein isoform A [Homo sapiens]
Length = 1075
Score = 36.2 bits (82), Expect = 0.11
Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 35 RREPGGRAGAPGCFPGPLMPRVPPDGRLRRAAALDGDPGAGPGDHNRSDCG---PQPPPP 91
RR PGG + G PGPL P G A+ G A R G PQPPPP
Sbjct: 25 RRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGPVAAAGSGLRRGAEGILAPQPPPP 84
>gi|27262651 ataxin 2 related protein isoform D [Homo sapiens]
Length = 1044
Score = 36.2 bits (82), Expect = 0.11
Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 35 RREPGGRAGAPGCFPGPLMPRVPPDGRLRRAAALDGDPGAGPGDHNRSDCG---PQPPPP 91
RR PGG + G PGPL P G A+ G A R G PQPPPP
Sbjct: 25 RRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGPVAAAGSGLRRGAEGILAPQPPPP 84
>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
Length = 651
Score = 35.8 bits (81), Expect = 0.14
Identities = 32/83 (38%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
Query: 12 AAALLLLLLLLGFLLFGG--DLGCERREPGGRAGAPGCFPGPLMPRVPPDGRLRRAAALD 69
AAAL L L L L GG D E G A A G G VPPDG A
Sbjct: 56 AAALRLALDQLSALGLGGAGDTDEEGAAGDGAAAAGGADGGAAPEPVPPDGP-EAGAPPT 114
Query: 70 GDPGAGPGDHNRSDCGPQPPPPP 92
P PG D PPPPP
Sbjct: 115 LAPAVAPGSLPLLDPNASPPPPP 137
>gi|22027541 programmed cell death 7 [Homo sapiens]
Length = 485
Score = 35.4 bits (80), Expect = 0.19
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 45 PGCFPGPLMPRVPPDGRLR-RAAALDGDPGAGPGDHNRSDCGPQPPPPPKC 94
PG FPG P + P L+ RA+A G G G P PPPPP+C
Sbjct: 45 PGPFPGASAPFLQPPLALQPRASAEASRGGGGAGAFYPVPPPPLPPPPPQC 95
>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
Length = 548
Score = 35.0 bits (79), Expect = 0.24
Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 16/58 (27%)
Query: 38 PGGRAGAPGCFPGPLMPRVPPDGRLRRAAALDGDPGAGPGDHNRSDCGP---QPPPPP 92
PGG G P FP PL +L G G P HN + P QPPPPP
Sbjct: 387 PGGPGGGPHSFPHPL-------------PSLTGGHGGHPMQHNPNGPPPPWMQPPPPP 431
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 35.0 bits (79), Expect = 0.24
Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 16/58 (27%)
Query: 38 PGGRAGAPGCFPGPLMPRVPPDGRLRRAAALDGDPGAGPGDHNRSDCGP---QPPPPP 92
PGG G P FP PL +L G G P HN + P QPPPPP
Sbjct: 387 PGGPGGGPHSFPHPL-------------PSLTGGHGGHPMQHNPNGPPPPWMQPPPPP 431
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 35.0 bits (79), Expect = 0.24
Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 16/58 (27%)
Query: 38 PGGRAGAPGCFPGPLMPRVPPDGRLRRAAALDGDPGAGPGDHNRSDCGP---QPPPPP 92
PGG G P FP PL +L G G P HN + P QPPPPP
Sbjct: 387 PGGPGGGPHSFPHPL-------------PSLTGGHGGHPMQHNPNGPPPPWMQPPPPP 431
>gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transferase
3 [Homo sapiens]
Length = 998
Score = 34.7 bits (78), Expect = 0.32
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 588 EWPRGHAPTDYARWR------EAQAPYRVQWAANYEPYVVVPRDCPRYDPRFVGFGWNKV 641
+WP GH + + R +P + QW E Y+ R R P+ G GW+
Sbjct: 531 KWPPGHPVKNLPQMRGPRPRPAGDSPRKTQWLNQVESYIAEQRRGDRMRPQAPGRGWHGE 590
Query: 642 AHIVELDAQE 651
+V QE
Sbjct: 591 EEVVAAAGQE 600
>gi|98961138 ZXD family zinc finger C isoform 2 [Homo sapiens]
Length = 710
Score = 34.7 bits (78), Expect = 0.32
Identities = 25/60 (41%), Positives = 27/60 (45%), Gaps = 11/60 (18%)
Query: 38 PGGRAGAPGCFPGPLMPRVPPDGR--LRRAAAL-----DGDPGAGPGDHNRSDCGPQPPP 90
P R G G PGPL P G RR L DG PGA PG+ + GP PPP
Sbjct: 10 PTARGGQHGGGPGPLRRAPAPLGASPARRRLLLVRGPEDGGPGARPGEAS----GPSPPP 65
>gi|98961133 ZXD family zinc finger C isoform 1 [Homo sapiens]
Length = 858
Score = 34.7 bits (78), Expect = 0.32
Identities = 25/60 (41%), Positives = 27/60 (45%), Gaps = 11/60 (18%)
Query: 38 PGGRAGAPGCFPGPLMPRVPPDGR--LRRAAAL-----DGDPGAGPGDHNRSDCGPQPPP 90
P R G G PGPL P G RR L DG PGA PG+ + GP PPP
Sbjct: 10 PTARGGQHGGGPGPLRRAPAPLGASPARRRLLLVRGPEDGGPGARPGEAS----GPSPPP 65
>gi|145275195 Cdk5 and Abl enzyme substrate 2 [Homo sapiens]
Length = 478
Score = 34.7 bits (78), Expect = 0.32
Identities = 29/75 (38%), Positives = 32/75 (42%), Gaps = 32/75 (42%)
Query: 43 GAPGCFPGPLMP----------RVPP-------DGRLRRAA-------ALDG-DPGAGPG 77
GAPG PGP P R PP D R R+AA +LDG P GPG
Sbjct: 8 GAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPG 67
Query: 78 DHNRSDCGPQPPPPP 92
G +PPPPP
Sbjct: 68 -------GEKPPPPP 75
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 34.7 bits (78), Expect = 0.32
Identities = 19/55 (34%), Positives = 21/55 (38%)
Query: 38 PGGRAGAPGCFPGPLMPRVPPDGRLRRAAALDGDPGAGPGDHNRSDCGPQPPPPP 92
PG P PG P+ P +A L G P P D P PPPPP
Sbjct: 538 PGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPP 592
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.140 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,686,732
Number of Sequences: 37866
Number of extensions: 1767398
Number of successful extensions: 7688
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 7423
Number of HSP's gapped (non-prelim): 302
length of query: 721
length of database: 18,247,518
effective HSP length: 110
effective length of query: 611
effective length of database: 14,082,258
effective search space: 8604259638
effective search space used: 8604259638
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.