Guide to the Human Genome
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Name: NLGN2 Sequence: fasta or formatted (835aa) NCBI GI: 30840978
Description:

neuroligin 2

Referenced in:

Neurons

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         75           3
 C cysteine            1.2         10           1
 D aspartate           5.4         45           2
 E glutamate           5.3         44           3
 F phenylalanine       4.1         34           1
 G glycine             9.6         80           4
 H histidine           2.4         20           2
 I isoleucine          2.2         18           1
 K lysine              3.0         25           2
 L leucine            10.7         89           2
 M methionine          1.4         12           1
 N asparagine          4.0         33           2
 P proline            11.1         93           8
 Q glutamine           3.0         25           2
 R arginine            5.9         49           2
 S serine              4.7         39           2
 T threonine           5.5         46           4
 V valine              6.7         56           2
 W tryptophan          1.4         12           1
 Y tyrosine            3.6         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neuroligin 2 
NLGN3                 0.601   neuroligin 3 
NLGN1                 0.597   neuroligin 1 
NLGN4X                0.587   X-linked neuroligin 4 
NLGN4X                0.587   X-linked neuroligin 4 
NLGN4Y                0.578   neuroligin 4, Y-linked 
BCHE                  0.167   butyrylcholinesterase precursor 
ACHE                  0.162   acetylcholinesterase isoform E4-E5 precursor 
ACHE                  0.161   acetylcholinesterase isoform E4-E6 precursor 
CES1                  0.155   carboxylesterase 1 isoform a precursor 
CES1                  0.155   carboxylesterase 1 isoform b precursor 
CES1                  0.154   carboxylesterase 1 isoform c precursor 
CES2                  0.152   carboxylesterase 2 isoform 1 
CES3                  0.150   carboxylesterase 3 
CEL                   0.149   carboxyl ester lipase precursor 
CES7                  0.146   carboxylesterase 7 isoform 1 
CES2                  0.142   carboxylesterase 2 isoform 2 
CES8                  0.133   carboxylesterase 8 (putative) 
CES7                  0.119   carboxylesterase 7 isoform 2 
TG                    0.096   thyroglobulin 
LOC649264             0.075   PREDICTED: similar to hCG40360 
LOC649264             0.074   PREDICTED: similar to hCG40360 
LOC649264             0.040   PREDICTED: similar to hCG40360 
FMNL1                 0.019   formin-like 1 
PRR12                 0.016   proline rich 12 
WASF2                 0.016   WAS protein family, member 2 
SF1                   0.016   splicing factor 1 isoform 1 
FMN2                  0.016   formin 2 
CEBPA                 0.015   CCAAT/enhancer binding protein alpha 
WIPF3                 0.015   WAS/WASL interacting protein family, member 3 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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