Guide to the Human Genome
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Name: B3GNT1 Sequence: fasta or formatted (415aa) NCBI GI: 5802984
Description:

UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         39           2
 C cysteine            1.9          8           1
 D aspartate           3.9         16           1
 E glutamate           6.7         28           2
 F phenylalanine       4.6         19           2
 G glycine             5.8         24           2
 H histidine           2.2          9           1
 I isoleucine          1.7          7           1
 K lysine              3.4         14           1
 L leucine            12.5         52           3
 M methionine          2.7         11           1
 N asparagine          4.3         18           2
 P proline             6.5         27           2
 Q glutamine           5.5         23           1
 R arginine            7.0         29           2
 S serine              5.3         22           2
 T threonine           2.7         11           2
 V valine              7.7         32           2
 W tryptophan          1.4          6           1
 Y tyrosine            4.8         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltrans... 
LARGE                 0.113   like-glycosyltransferase 
LARGE                 0.113   like-glycosyltransferase 
GYLTL1B               0.090   glycosyltransferase-like 1B 
MUC15                 0.007   mucin 15 isoform c 
MUC15                 0.007   mucin 15 isoform a 
MUC15                 0.007   mucin 15 isoform b 
DNAH17                0.006   PREDICTED: dynein, axonemal, heavy chain 17 
DNAH17                0.006   PREDICTED: dynein, axonemal, heavy chain 17 
DNAH17                0.006   PREDICTED: dynein, axonemal, heavy chain 17 
EXD3                  0.006   exonuclease 3'-5' domain containing 3 
CDH3                  0.005   cadherin 3, type 1 preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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