Guide to the Human Genome
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Name: CABLES2 Sequence: fasta or formatted (478aa) NCBI GI: 145275195
Description:

Cdk5 and Abl enzyme substrate 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         42           5
 C cysteine            1.7          8           1
 D aspartate           3.8         18           2
 E glutamate           5.4         26           2
 F phenylalanine       3.3         16           2
 G glycine             7.1         34           2
 H histidine           2.1         10           1
 I isoleucine          2.3         11           1
 K lysine              6.3         30           2
 L leucine            11.1         53           2
 M methionine          1.5          7           1
 N asparagine          2.3         11           2
 P proline            11.1         53           5
 Q glutamine           3.8         18           2
 R arginine            8.2         39           3
 S serine              7.7         37           2
 T threonine           5.2         25           2
 V valine              5.9         28           2
 W tryptophan          0.2          1           1
 Y tyrosine            2.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Cdk5 and Abl enzyme substrate 2 
CABLES1               0.435   Cdk5 and Abl enzyme substrate 1 isoform 2 
CABLES1               0.429   Cdk5 and Abl enzyme substrate 1 isoform 1 
SAMD1                 0.047   sterile alpha motif domain containing 1 
WASL                  0.037   Wiskott-Aldrich syndrome gene-like protein 
CPSF6                 0.034   cleavage and polyadenylation specific factor 6, 68 ...
SFPQ                  0.034   splicing factor proline/glutamine rich (polypyrimidin...
SNRPN                 0.032   small nuclear ribonucleoprotein polypeptide N 
SNRPN                 0.032   small nuclear ribonucleoprotein polypeptide N 
SNRPN                 0.032   small nuclear ribonucleoprotein polypeptide N 
SNRPN                 0.032   small nuclear ribonucleoprotein polypeptide N 
SNRPN                 0.032   small nuclear ribonucleoprotein polypeptide N 
FMNL1                 0.032   formin-like 1 
VASP                  0.031   vasodilator-stimulated phosphoprotein 
WBP11                 0.031   WW domain binding protein 11 
TAF4                  0.031   TBP-associated factor 4 
WASF2                 0.030   WAS protein family, member 2 
FMN2                  0.030   formin 2 
DIAPH1                0.030   diaphanous 1 isoform 2 
DIAPH1                0.030   diaphanous 1 isoform 1 
WAS                   0.030   Wiskott-Aldrich syndrome protein 
SNRPB                 0.029   small nuclear ribonucleoprotein polypeptide B/B' iso...
SNRPB                 0.029   small nuclear ribonucleoprotein polypeptide B/B' isof...
PRB1                  0.029   proline-rich protein BstNI subfamily 1 isoform 2 pre...
NACA                  0.029   nascent polypeptide-associated complex alpha subuni...
PRR12                 0.029   proline rich 12 
PRB1                  0.028   proline-rich protein BstNI subfamily 1 isoform 1 pre...
KIF13B                0.028   kinesin family member 13B 
EMID2                 0.028   EMI domain containing 2 
RFX1                  0.027   regulatory factor X1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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