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Search of human proteins with 239741762
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741762 PREDICTED: hypothetical protein [Homo sapiens]
(53 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239741762 PREDICTED: hypothetical protein [Homo sapiens] 115 1e-26
gi|239753335 PREDICTED: hypothetical protein [Homo sapiens] 102 8e-23
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 38 0.001
gi|31657109 zinc finger protein 282 [Homo sapiens] 37 0.003
gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens] 35 0.017
gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens] 35 0.017
gi|239757244 PREDICTED: hypothetical protein [Homo sapiens] 35 0.017
gi|239751752 PREDICTED: hypothetical protein [Homo sapiens] 35 0.017
gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo ... 35 0.017
gi|13994190 frizzled 8 [Homo sapiens] 34 0.022
gi|15721939 metastatic lymph node 51 [Homo sapiens] 33 0.037
gi|33620755 YEATS domain containing 2 [Homo sapiens] 33 0.037
gi|154355000 KH-type splicing regulatory protein [Homo sapiens] 33 0.048
gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2... 33 0.048
gi|167830433 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1... 33 0.048
gi|195972866 keratin 10 [Homo sapiens] 33 0.048
gi|15011916 nucleolar protein family A, member 1 [Homo sapiens] 33 0.048
gi|9506713 nucleolar protein family A, member 1 [Homo sapiens] 33 0.048
gi|197209826 chromosome 2 open reading frame 21 isoform 1 [Homo ... 33 0.063
gi|55956899 keratin 9 [Homo sapiens] 33 0.063
gi|125987596 sodium bicarbonate transporter 4 isoform a [Homo sa... 33 0.063
gi|19743827 sodium bicarbonate transporter 4 isoform c [Homo sap... 33 0.063
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 33 0.063
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 33 0.063
gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens] 33 0.063
gi|21070967 neurexin 1 isoform beta precursor [Homo sapiens] 32 0.082
gi|56699482 hypothetical protein LOC25940 [Homo sapiens] 32 0.082
gi|89145413 short stature homeobox 2 isoform a [Homo sapiens] 32 0.11
gi|14589933 protocadherin 7 isoform b precursor [Homo sapiens] 32 0.11
gi|14589935 protocadherin 7 isoform c precursor [Homo sapiens] 32 0.11
>gi|239741762 PREDICTED: hypothetical protein [Homo sapiens]
Length = 53
Score = 115 bits (287), Expect = 1e-26
Identities = 53/53 (100%), Positives = 53/53 (100%)
Query: 1 MGPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAAAWLTGLAR 53
MGPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAAAWLTGLAR
Sbjct: 1 MGPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAAAWLTGLAR 53
>gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]
Length = 113
Score = 102 bits (253), Expect = 8e-23
Identities = 48/52 (92%), Positives = 48/52 (92%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAAAWLTGLAR 53
G GG PAAQSGGDGGGLPRRAGAEPG RGGGSGGTMPGGRRAAAWLTGLAR
Sbjct: 62 GRSGGGPAAQSGGDGGGLPRRAGAEPGGRGGGSGGTMPGGRRAAAWLTGLAR 113
>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
sapiens]
Length = 419
Score = 38.1 bits (87), Expect = 0.001
Identities = 19/40 (47%), Positives = 20/40 (50%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
GP GG GG GGG G PG GGG GG + GG
Sbjct: 146 GPGGGGGPGGGGGPGGGPGGGGGGGPGGGGGGPGGGLLGG 185
Score = 32.7 bits (73), Expect = 0.063
Identities = 17/40 (42%), Positives = 17/40 (42%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
G G A G GGG P G G GGG GG GG
Sbjct: 135 GAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGG 174
Score = 32.3 bits (72), Expect = 0.082
Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Query: 1 MGPVGGRPAAQSG-----GDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
M GG AA G G GGG G PG GG GG PGG
Sbjct: 128 MAGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGG 173
Score = 29.6 bits (65), Expect = 0.53
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGT 37
GG P GG GGG P G PG GG GG+
Sbjct: 156 GGGPGGGPGGGGGGGPGGGGGGPG--GGLLGGS 186
Score = 29.3 bits (64), Expect = 0.70
Identities = 18/46 (39%), Positives = 18/46 (39%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAAAWLTG 50
GG A G GGG G G GGG GG GG L G
Sbjct: 139 GGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGGGGGPGGGLLG 184
>gi|31657109 zinc finger protein 282 [Homo sapiens]
Length = 671
Score = 37.0 bits (84), Expect = 0.003
Identities = 23/49 (46%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 3 PVGGRPAAQSGGDGGGLPRRAGAEPG-DRGGGSGGTMPGGRRAAAWLTG 50
P G R GGDGGG GAE G GGG G PGG R + L G
Sbjct: 466 PGGDRSTGGGGGDGGG--GGGGAEAGTGAGGGCGSCCPGGLRRSLLLHG 512
Score = 25.8 bits (55), Expect = 7.7
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 5/35 (14%)
Query: 6 GRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPG 40
G A GGD R G GD GGG GG G
Sbjct: 460 GSGEAPPGGD-----RSTGGGGGDGGGGGGGAEAG 489
>gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens]
Length = 589
Score = 34.7 bits (78), Expect = 0.017
Identities = 19/37 (51%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
GG +SGG GG R G GDRGGG GG GG
Sbjct: 432 GGYSGDRSGGGYGG-DRSGGGYGGDRGGGYGGDRGGG 467
Score = 33.9 bits (76), Expect = 0.028
Identities = 19/37 (51%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
GG +SGG GG R G GDRGGG GG GG
Sbjct: 441 GGYGGDRSGGGYGG--DRGGGYGGDRGGGYGGDRGGG 475
Score = 32.3 bits (72), Expect = 0.082
Identities = 19/40 (47%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 2 GPVGGRPAAQSGGD-GGGLPRRAGAEPGDRGGGSGGTMPG 40
G GG GGD GGG G GDRGGG GG G
Sbjct: 458 GGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGG 497
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDR-GGGSGGTMPGG 41
G GG +SGG GG G GDR GGG GG GG
Sbjct: 410 GDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGG 450
Score = 30.0 bits (66), Expect = 0.41
Identities = 20/43 (46%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 2 GPVGGRPAAQSGGDGG-GLPRRAGAEPGDRGGGS--GGTMPGG 41
G GG G GG G R G GDRGGGS GG GG
Sbjct: 503 GGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGG 545
Score = 30.0 bits (66), Expect = 0.41
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPG 40
G G +SGG GG R G GDRGGG GG G
Sbjct: 533 GGGSGYGGDRSGGYGGD--RSGGGYGGDRGGGYGGDRGG 569
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDR-GGGSGGTMPGG 41
GG +S G G R G GDR GGG GG GG
Sbjct: 422 GGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGG 459
Score = 28.1 bits (61), Expect = 1.6
Identities = 15/34 (44%), Positives = 15/34 (44%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSG 35
G GG GGD GG G GDRGG G
Sbjct: 481 GGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGG 514
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/29 (48%), Positives = 14/29 (48%)
Query: 13 GGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
GGD GG G GDRGG G GG
Sbjct: 499 GGDRGGYGGDRGGYGGDRGGYGGDRSRGG 527
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
G R GGD GG GDR GG GG GG
Sbjct: 521 GDRSRGGYGGDRGG----GSGYGGDRSGGYGGDRSGG 553
Score = 28.1 bits (61), Expect = 1.6
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDR-GGGSGGTMPGG 41
GG + GG G G R+G GDR GGG GG GG
Sbjct: 526 GGYGGDRGGGSGYG-GDRSGGYGGDRSGGGYGGDRGGG 562
Score = 27.3 bits (59), Expect = 2.6
Identities = 20/38 (52%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGR 42
GG +SGG GG R G GDRGG GG M GGR
Sbjct: 544 GGYGGDRSGGGYGG--DRGGGYGGDRGG-YGGKM-GGR 577
Score = 26.6 bits (57), Expect = 4.5
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 6/41 (14%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGT---MPGGR 42
GG + GG GG R G GDRGGG GG G R
Sbjct: 450 GGYGGDRGGGYGGD---RGGGYGGDRGGGYGGDRGGYGGDR 487
Score = 26.6 bits (57), Expect = 4.5
Identities = 14/34 (41%), Positives = 14/34 (41%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSG 35
G GG G GGG G GDRGG G
Sbjct: 474 GGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGG 507
Score = 26.2 bits (56), Expect = 5.9
Identities = 19/42 (45%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 2 GPVGGRPAAQSGGDGGGL--PRRAGAEPGDRGGGSGGTMPGG 41
G GG GGD GG R G GDRGG GG GG
Sbjct: 450 GGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGG-YGGDRGGG 490
>gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens]
Length = 592
Score = 34.7 bits (78), Expect = 0.017
Identities = 19/37 (51%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
GG +SGG GG R G GDRGGG GG GG
Sbjct: 435 GGYSGDRSGGGYGG-DRSGGGYGGDRGGGYGGDRGGG 470
Score = 33.9 bits (76), Expect = 0.028
Identities = 19/37 (51%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
GG +SGG GG R G GDRGGG GG GG
Sbjct: 444 GGYGGDRSGGGYGG--DRGGGYGGDRGGGYGGDRGGG 478
Score = 32.3 bits (72), Expect = 0.082
Identities = 19/40 (47%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 2 GPVGGRPAAQSGGD-GGGLPRRAGAEPGDRGGGSGGTMPG 40
G GG GGD GGG G GDRGGG GG G
Sbjct: 461 GGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGG 500
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDR-GGGSGGTMPGG 41
G GG +SGG GG G GDR GGG GG GG
Sbjct: 413 GDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGG 453
Score = 30.0 bits (66), Expect = 0.41
Identities = 20/43 (46%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 2 GPVGGRPAAQSGGDGG-GLPRRAGAEPGDRGGGS--GGTMPGG 41
G GG G GG G R G GDRGGGS GG GG
Sbjct: 506 GGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGG 548
Score = 30.0 bits (66), Expect = 0.41
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPG 40
G G +SGG GG R G GDRGGG GG G
Sbjct: 536 GGGSGYGGDRSGGYGGD--RSGGGYGGDRGGGYGGDRGG 572
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDR-GGGSGGTMPGG 41
GG +S G G R G GDR GGG GG GG
Sbjct: 425 GGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGG 462
Score = 28.1 bits (61), Expect = 1.6
Identities = 15/34 (44%), Positives = 15/34 (44%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSG 35
G GG GGD GG G GDRGG G
Sbjct: 484 GGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGG 517
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/29 (48%), Positives = 14/29 (48%)
Query: 13 GGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
GGD GG G GDRGG G GG
Sbjct: 502 GGDRGGYGGDRGGYGGDRGGYGGDRSRGG 530
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
G R GGD GG GDR GG GG GG
Sbjct: 524 GDRSRGGYGGDRGG----GSGYGGDRSGGYGGDRSGG 556
Score = 28.1 bits (61), Expect = 1.6
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDR-GGGSGGTMPGG 41
GG + GG G G R+G GDR GGG GG GG
Sbjct: 529 GGYGGDRGGGSGYG-GDRSGGYGGDRSGGGYGGDRGGG 565
Score = 27.3 bits (59), Expect = 2.6
Identities = 20/38 (52%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGR 42
GG +SGG GG R G GDRGG GG M GGR
Sbjct: 547 GGYGGDRSGGGYGG--DRGGGYGGDRGG-YGGKM-GGR 580
Score = 26.6 bits (57), Expect = 4.5
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 6/41 (14%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGT---MPGGR 42
GG + GG GG R G GDRGGG GG G R
Sbjct: 453 GGYGGDRGGGYGGD---RGGGYGGDRGGGYGGDRGGYGGDR 490
Score = 26.6 bits (57), Expect = 4.5
Identities = 14/34 (41%), Positives = 14/34 (41%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSG 35
G GG G GGG G GDRGG G
Sbjct: 477 GGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGG 510
Score = 26.2 bits (56), Expect = 5.9
Identities = 19/42 (45%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 2 GPVGGRPAAQSGGDGGGL--PRRAGAEPGDRGGGSGGTMPGG 41
G GG GGD GG R G GDRGG GG GG
Sbjct: 453 GGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGG-YGGDRGGG 493
>gi|239757244 PREDICTED: hypothetical protein [Homo sapiens]
Length = 190
Score = 34.7 bits (78), Expect = 0.017
Identities = 18/35 (51%), Positives = 18/35 (51%)
Query: 10 AQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRA 44
A G DGG RR A PG GG SG P RRA
Sbjct: 21 AAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRA 55
>gi|239751752 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 34.7 bits (78), Expect = 0.017
Identities = 18/35 (51%), Positives = 18/35 (51%)
Query: 10 AQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRA 44
A G DGG RR A PG GG SG P RRA
Sbjct: 42 AAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRA 76
>gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo
sapiens]
Length = 211
Score = 34.7 bits (78), Expect = 0.017
Identities = 18/35 (51%), Positives = 18/35 (51%)
Query: 10 AQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRA 44
A G DGG RR A PG GG SG P RRA
Sbjct: 42 AAGGSDGGTRARRIRAHPGGEGGLSGPAPPARRRA 76
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 34.3 bits (77), Expect = 0.022
Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 3 PVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAA 45
P G RP + GG GGG A A P GGG G P G AA
Sbjct: 185 PPGARPPHRGGGRGGG-GGDAAAPPARGGGGGGKARPPGGGAA 226
Score = 31.2 bits (69), Expect = 0.18
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 4 VGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAAAWLTGL 51
VGG A + G GGG G PG GG GG GG + TGL
Sbjct: 629 VGGGAGATAAGGGGGPGGGGGGGPGGGGGPGGG---GGSLYSDVSTGL 673
Score = 30.4 bits (67), Expect = 0.31
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 8 PAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAAA 46
P + G G R GA P RGGG GG GG AAA
Sbjct: 171 PPGEQPPSGSGHGRPPGARPPHRGGGRGG---GGGDAAA 206
Score = 30.0 bits (66), Expect = 0.41
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGR 42
GG P A G GG A A G G G+GG PGGR
Sbjct: 342 GGAPGAGGAGGAGG----AAAGAGAAGAGAGG--PGGR 373
Score = 25.8 bits (55), Expect = 7.7
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 9 AAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
A++ GGG A G GGG GG GG
Sbjct: 623 ASKGAAVGGGAGATAAGGGGGPGGGGGGGPGGG 655
>gi|15721939 metastatic lymph node 51 [Homo sapiens]
Length = 703
Score = 33.5 bits (75), Expect = 0.037
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 12 SGGDGGGLPRRAGAE-PGDRGGGSGGTMP---GGRRAAAWL 48
SG D GG P R G G GGG G++P GGR A L
Sbjct: 21 SGSDSGGSPLRGGGSCSGSAGGGGSGSLPSQRGGRTGALHL 61
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 33.5 bits (75), Expect = 0.037
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAAAWLTGLAR 53
GG A GG GGG +G+ G GG GGT GG ++ A G+++
Sbjct: 799 GGSGAGGGGGGGGG--GGSGSGGGGSTGGGGGTAGGGTQSTAGPGGISQ 845
Score = 27.3 bits (59), Expect = 2.6
Identities = 15/36 (41%), Positives = 16/36 (44%)
Query: 9 AAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRA 44
+A SGG G G G G GG G T GG A
Sbjct: 795 SAASGGSGAGGGGGGGGGGGSGSGGGGSTGGGGGTA 830
Score = 26.6 bits (57), Expect = 4.5
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTM-PGG 41
G GG GG G G G G GGG+ T PGG
Sbjct: 802 GAGGGGGGGGGGGSGSGGGGSTGGGGGTAGGGTQSTAGPGG 842
>gi|154355000 KH-type splicing regulatory protein [Homo sapiens]
Length = 711
Score = 33.1 bits (74), Expect = 0.048
Identities = 22/48 (45%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 2 GPVGGRPAAQSGGDG----GGLPRRAGAEPGDRGGGS-GGTMPGGRRA 44
GP G P GG G GG P GDRGGG GG PGG A
Sbjct: 8 GPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSA 55
Score = 28.5 bits (62), Expect = 1.2
Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGS---GGTMPGGRRAA 45
GP G P A G GGG P G G GG S GG PG R+ A
Sbjct: 29 GPPPGPPGA--GDRGGGGPGGGGPGGGSAGGPSQPPGGGGPGIRKDA 73
>gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2
[Homo sapiens]
Length = 994
Score = 33.1 bits (74), Expect = 0.048
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 6 GRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRR 43
G P + GG GGG AG G+RG G GG GG R
Sbjct: 13 GGPRSSGGGYGGG---PAGGHGGNRGSGGGGGGGGGGR 47
Score = 27.7 bits (60), Expect = 2.0
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 10/51 (19%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSG--GTMPG---GRRAAAW 47
G GG PA GG+ G +G G GGG G G PG GR W
Sbjct: 20 GGYGGGPAGGHGGNRG-----SGGGGGGGGGGRGGRGRHPGHLKGREIGMW 65
>gi|167830433 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1
[Homo sapiens]
Length = 1008
Score = 33.1 bits (74), Expect = 0.048
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 6 GRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRR 43
G P + GG GGG AG G+RG G GG GG R
Sbjct: 13 GGPRSSGGGYGGG---PAGGHGGNRGSGGGGGGGGGGR 47
Score = 27.7 bits (60), Expect = 2.0
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 10/51 (19%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSG--GTMPG---GRRAAAW 47
G GG PA GG+ G +G G GGG G G PG GR W
Sbjct: 20 GGYGGGPAGGHGGNRG-----SGGGGGGGGGGRGGRGRHPGHLKGREIGMW 65
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 33.1 bits (74), Expect = 0.048
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
GGR GG GG G+ G GGG GG+ GG
Sbjct: 462 GGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGG 498
Score = 29.6 bits (65), Expect = 0.53
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGS--GGTMPGG 41
GG + SGG GGG +G G GGGS GG+ GG
Sbjct: 520 GGHGGSSSGGYGGG---SSGGGGGGYGGGSSGGGSSSGG 555
Score = 29.3 bits (64), Expect = 0.70
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGG-SGGTMPGGRRAAA 46
GG SGG GGG + GGG GG+ GG ++++
Sbjct: 528 GGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSS 570
Score = 28.5 bits (62), Expect = 1.2
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGS-----GGTMPGG 41
G GG SGG GG G+ G GGGS GG+ GG
Sbjct: 485 GGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGG 529
Score = 28.1 bits (61), Expect = 1.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
G GG S G G G G GGG GG GG
Sbjct: 467 GSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGG 506
Score = 27.3 bits (59), Expect = 2.6
Identities = 14/37 (37%), Positives = 15/37 (40%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
GG SGG G G+ G GG S G GG
Sbjct: 497 GGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGG 533
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/37 (37%), Positives = 15/37 (40%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
GG S G G G +G G GG GG GG
Sbjct: 501 GGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGG 537
Score = 26.2 bits (56), Expect = 5.9
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGS-GGTMPGG 41
G GG + GG GGG G+ G GGGS GG GG
Sbjct: 476 GSSGG--GSSGGGHGGG---HGGSSGGGYGGGSSGGGSSGG 511
Score = 25.8 bits (55), Expect = 7.7
Identities = 14/40 (35%), Positives = 16/40 (40%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
G GG + G G G+ G GGGS G GG
Sbjct: 502 GSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGG 541
>gi|15011916 nucleolar protein family A, member 1 [Homo sapiens]
Length = 217
Score = 33.1 bits (74), Expect = 0.048
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAE--PGDRGGGSGGTMPGGRR 43
GGR GG GGG R + G GGG GG GG R
Sbjct: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGR 46
Score = 32.3 bits (72), Expect = 0.082
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 3 PVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGR 42
P G + + GG GG R G G RGGG GG GGR
Sbjct: 161 PPGEKGPPRGGGRGG---RGGGRGGGGRGGGRGGGFRGGR 197
Score = 31.2 bits (69), Expect = 0.18
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 3 PVGGRPAAQSGGDGGGLPRRAGAEPGDRG--GGSGGTMPGGR 42
P GG + GG GGG R G G RG GG GG GGR
Sbjct: 168 PRGGGRGGRGGGRGGG-GRGGGRGGGFRGGRGGGGGGFRGGR 208
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGG 36
GGR + GG GG G G RGGG G
Sbjct: 183 GGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214
Score = 26.6 bits (57), Expect = 4.5
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 13 GGDGGGLPRRAGAEPG-DRGGGSGGTMPG 40
GG GGG R G G RGGG GG G
Sbjct: 33 GGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61
Score = 26.2 bits (56), Expect = 5.9
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 7/44 (15%)
Query: 7 RPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAAAWLTG 50
RP + G P R G G RGGG GG GG R + G
Sbjct: 160 RPPGEKG------PPRGGGR-GGRGGGRGGGGRGGGRGGGFRGG 196
>gi|9506713 nucleolar protein family A, member 1 [Homo sapiens]
Length = 217
Score = 33.1 bits (74), Expect = 0.048
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAE--PGDRGGGSGGTMPGGRR 43
GGR GG GGG R + G GGG GG GG R
Sbjct: 6 GGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGR 46
Score = 32.3 bits (72), Expect = 0.082
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 3 PVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGR 42
P G + + GG GG R G G RGGG GG GGR
Sbjct: 161 PPGEKGPPRGGGRGG---RGGGRGGGGRGGGRGGGFRGGR 197
Score = 31.2 bits (69), Expect = 0.18
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 3 PVGGRPAAQSGGDGGGLPRRAGAEPGDRG--GGSGGTMPGGR 42
P GG + GG GGG R G G RG GG GG GGR
Sbjct: 168 PRGGGRGGRGGGRGGG-GRGGGRGGGFRGGRGGGGGGFRGGR 208
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGG 36
GGR + GG GG G G RGGG G
Sbjct: 183 GGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRG 214
Score = 26.6 bits (57), Expect = 4.5
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 13 GGDGGGLPRRAGAEPG-DRGGGSGGTMPG 40
GG GGG R G G RGGG GG G
Sbjct: 33 GGGGGGGNFRGGGRGGFGRGGGRGGFNKG 61
Score = 26.2 bits (56), Expect = 5.9
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 7/44 (15%)
Query: 7 RPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAAAWLTG 50
RP + G P R G G RGGG GG GG R + G
Sbjct: 160 RPPGEKG------PPRGGGR-GGRGGGRGGGGRGGGRGGGFRGG 196
>gi|197209826 chromosome 2 open reading frame 21 isoform 1 [Homo
sapiens]
Length = 3258
Score = 32.7 bits (73), Expect = 0.063
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 6 GRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
G PA GDGGG G G GGG GG GG
Sbjct: 730 GGPAVSGAGDGGG--EEGGGGDGGGGGGDGGGGGGG 763
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 32.7 bits (73), Expect = 0.063
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
G GG GG GGG +G G GGSGG GG
Sbjct: 525 GSGGGSGGGYGGGSGGG---HSGGSGGGHSGGSGGNYGGG 561
Score = 31.6 bits (70), Expect = 0.14
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPG---DRGGGSGGTMPGG 41
GG SGG GGG +G G GGGSGG GG
Sbjct: 536 GGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGG 575
Score = 30.4 bits (67), Expect = 0.31
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
G GG + GG G G G G GGGSGG GG
Sbjct: 511 GSRGGSGGSYGGGSGSG-----GGSGGGYGGGSGGGHSGG 545
Score = 28.9 bits (63), Expect = 0.91
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
G GG G GGG +G G GGGSGG GG
Sbjct: 88 GGFGGGSRGFGGASGGGYSS-SGGFGGGFGGGSGGGFGGG 126
Score = 28.9 bits (63), Expect = 0.91
Identities = 16/40 (40%), Positives = 16/40 (40%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
G GG SG GG G G GGSGG GG
Sbjct: 514 GGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGG 553
Score = 28.5 bits (62), Expect = 1.2
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSG 35
G GG + SGG+ GG G G GGGSG
Sbjct: 544 GGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSG 577
Score = 28.5 bits (62), Expect = 1.2
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGG------SGGTMPGGRRAA 45
G G GG GGG R G+ G GGG SGG+ GG A+
Sbjct: 559 GGGSGSGGGSGGGYGGGSGSRGGSG-GSHGGGSGFGGESGGSYGGGEEAS 607
Score = 27.7 bits (60), Expect = 2.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 6 GRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAAAW 47
G + GG GGG +G+ G G GG+ GG ++
Sbjct: 559 GGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSY 600
Score = 27.3 bits (59), Expect = 2.6
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 7/40 (17%)
Query: 4 VGGRPAAQSGGDGGGLPR--RAGAEPGDRGGGSGGTMPGG 41
+GGR GG GG R R G+ GGGSGG GG
Sbjct: 475 LGGR-----GGSGGSYGRGSRGGSGGSYGGGGSGGGYGGG 509
Score = 27.3 bits (59), Expect = 2.6
Identities = 13/35 (37%), Positives = 13/35 (37%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGG 36
G GG GG GG G G GG GG
Sbjct: 537 GSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGG 571
Score = 26.9 bits (58), Expect = 3.5
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRG-----GGSGGTMPGG 41
G GG G GGG G+ G G GGSGG+ GG
Sbjct: 545 GSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGG 589
Score = 26.6 bits (57), Expect = 4.5
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGG-GSGGTMPGG 41
G GG GG GGG R G+ GG GSGG GG
Sbjct: 495 GSYGG--GGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGG 533
Score = 26.2 bits (56), Expect = 5.9
Identities = 19/49 (38%), Positives = 22/49 (44%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAAAWLTG 50
G GG + S G GGG R G G G S G GG +A+ L G
Sbjct: 40 GGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSLGG 88
Score = 26.2 bits (56), Expect = 5.9
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
G GG + GG GG G G R GGSGG+ GG
Sbjct: 488 GSRGGSGGSYGGGGSGG---GYGGGSGSR-GGSGGSYGGG 523
Score = 26.2 bits (56), Expect = 5.9
Identities = 14/40 (35%), Positives = 16/40 (40%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
G GG + GG G G G+ GSGG GG
Sbjct: 577 GSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGG 616
>gi|125987596 sodium bicarbonate transporter 4 isoform a [Homo
sapiens]
Length = 1137
Score = 32.7 bits (73), Expect = 0.063
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPG 40
G VGG A GG+GGG G+ G GG+GGT G
Sbjct: 437 GSVGGGGGAPGGGNGGG--GGGGSGGGAGSGGAGGTSSG 473
Score = 26.2 bits (56), Expect = 5.9
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 12 SGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
+G GGG GA G GGG GG GG
Sbjct: 436 NGSVGGG----GGAPGGGNGGGGGGGSGGG 461
>gi|19743827 sodium bicarbonate transporter 4 isoform c [Homo
sapiens]
Length = 1121
Score = 32.7 bits (73), Expect = 0.063
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPG 40
G VGG A GG+GGG G+ G GG+GGT G
Sbjct: 437 GSVGGGGGAPGGGNGGG--GGGGSGGGAGSGGAGGTSSG 473
Score = 26.2 bits (56), Expect = 5.9
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 12 SGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
+G GGG GA G GGG GG GG
Sbjct: 436 NGSVGGG----GGAPGGGNGGGGGGGSGGG 461
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 32.7 bits (73), Expect = 0.063
Identities = 16/32 (50%), Positives = 17/32 (53%)
Query: 9 AAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPG 40
A +GG GGG P AG G GGG GG G
Sbjct: 210 AGGAGGAGGGGPASAGGGGGGGGGGGGGGAAG 241
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 6 GRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAAAWLTG 50
G AA +GG GG G P GGG GG GG AA G
Sbjct: 204 GSAAASAGGAGGA----GGGGPASAGGGGGGGGGGGGGGAAGAGG 244
Score = 29.6 bits (65), Expect = 0.53
Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 3 PVGGRP-----AAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAA 45
P G P AA S G GG A G GGG GG GG A
Sbjct: 195 PTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGA 242
Score = 28.5 bits (62), Expect = 1.2
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTM 38
G GG PA+ GG GGG G G G+GG +
Sbjct: 215 GAGGGGPASAGGGGGGG-----GGGGGGGAAGAGGAL 246
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 9/40 (22%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
G GG A +GG GGG G GGG G GG
Sbjct: 214 GGAGGGGPASAGGGGGG---------GGGGGGGGAAGAGG 244
>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform a [Homo sapiens]
Length = 403
Score = 32.7 bits (73), Expect = 0.063
Identities = 16/32 (50%), Positives = 17/32 (53%)
Query: 9 AAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPG 40
A +GG GGG P AG G GGG GG G
Sbjct: 210 AGGAGGAGGGGPASAGGGGGGGGGGGGGGAAG 241
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 6 GRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAAAWLTG 50
G AA +GG GG G P GGG GG GG AA G
Sbjct: 204 GSAAASAGGAGGA----GGGGPASAGGGGGGGGGGGGGGAAGAGG 244
Score = 29.6 bits (65), Expect = 0.53
Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 3 PVGGRP-----AAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAA 45
P G P AA S G GG A G GGG GG GG A
Sbjct: 195 PTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGA 242
Score = 28.5 bits (62), Expect = 1.2
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTM 38
G GG PA+ GG GGG G G G+GG +
Sbjct: 215 GAGGGGPASAGGGGGGG-----GGGGGGGAAGAGGAL 246
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 9/40 (22%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
G GG A +GG GGG G GGG G GG
Sbjct: 214 GGAGGGGPASAGGGGGG---------GGGGGGGGAAGAGG 244
>gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens]
Length = 483
Score = 32.7 bits (73), Expect = 0.063
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAAAWLTG 50
GG P+ G G + AEPG GGG GG PGG + TG
Sbjct: 3 GGGPSGGGPGGSGRARTSSFAEPGGGGGGGGGG-PGGSASGPGGTG 47
Score = 32.0 bits (71), Expect = 0.11
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 15/60 (25%)
Query: 2 GPVGGRPAAQS-------------GGDGGGLPRRAGAEPGDRGGG--SGGTMPGGRRAAA 46
GP GG P GG GGG P + + PG GGG S G M GG A++
Sbjct: 5 GPSGGGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGVGASS 64
Score = 29.3 bits (64), Expect = 0.70
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPG 40
G GG+ + + G G G G G GGGSGG G
Sbjct: 45 GTGGGKASVGAMGGGVGASSSGGGPGGSGGGGSGGPGAG 83
>gi|21070967 neurexin 1 isoform beta precursor [Homo sapiens]
Length = 442
Score = 32.3 bits (72), Expect = 0.082
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 22 RAGAE---PGDRGGGSGGTMPGGRRAAAWLTGL 51
R GAE PG GGG GG GGR A W+ L
Sbjct: 7 RCGAELGSPGGGGGGGGGGGAGGRLALLWIVPL 39
>gi|56699482 hypothetical protein LOC25940 [Homo sapiens]
Length = 518
Score = 32.3 bits (72), Expect = 0.082
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 5 GGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGG 41
GGR + GG GG R G + G RGGG G GG
Sbjct: 349 GGRGGHEQGGGRGG---RGGYDHGGRGGGRGNKHQGG 382
Score = 29.3 bits (64), Expect = 0.70
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 2 GPVGGRPAAQSGGDGGGLPRRAGAEPGDRG-GGSGGTMPGGRRAAAWLTG 50
G GGR GG GGG + D G GG GG GG R + + G
Sbjct: 358 GGRGGRGGYDHGGRGGGRGNKHQGGWTDGGSGGGGGYQDGGYRDSGFQPG 407
Score = 28.5 bits (62), Expect = 1.2
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 8/43 (18%)
Query: 8 PAAQSGGDGGG--------LPRRAGAEPGDRGGGSGGTMPGGR 42
P Q+GG GGG R G E G GG GG GGR
Sbjct: 329 PQQQTGGRGGGRGGYEHSSYGGRGGHEQGGGRGGRGGYDHGGR 371
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 6/35 (17%)
Query: 12 SGGDGGGLPR----RAGAEPGDRGGGSGGTMPGGR 42
SG GGG + + G GDRGGG GG GGR
Sbjct: 435 SGYQGGGYQQDNRYQDGGHHGDRGGGRGGR--GGR 467
>gi|89145413 short stature homeobox 2 isoform a [Homo sapiens]
Length = 331
Score = 32.0 bits (71), Expect = 0.11
Identities = 17/34 (50%), Positives = 18/34 (52%)
Query: 9 AAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGR 42
AA GG GGG G G GGG+GG GGR
Sbjct: 58 AAGGGGGGGGGGGGGGGGGGVGGGGAGGGAGGGR 91
Score = 28.9 bits (63), Expect = 0.91
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Query: 8 PAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRAAA 46
PA ++ G GGG G G GGG GG GG A
Sbjct: 54 PAVRAAGGGGG-----GGGGGGGGGGGGGVGGGGAGGGA 87
Score = 27.7 bits (60), Expect = 2.0
Identities = 15/35 (42%), Positives = 16/35 (45%)
Query: 10 AQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGRRA 44
A GG GGG G G GGG G GG R+
Sbjct: 58 AAGGGGGGGGGGGGGGGGGGVGGGGAGGGAGGGRS 92
>gi|14589933 protocadherin 7 isoform b precursor [Homo sapiens]
Length = 1072
Score = 32.0 bits (71), Expect = 0.11
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 6/40 (15%)
Query: 3 PVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGR 42
P GG A GG GG R +E G GGT PGGR
Sbjct: 207 PGGGGNGASGGGSGGSKRRLDASE------GGGGTNPGGR 240
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Query: 13 GGDGGGLPRRAGAE-----PGDRGGGSGGTMPGGRR 43
GG GG RRAGA PG G G+ G GG +
Sbjct: 188 GGGSGGESRRAGAADSAPYPGGGGNGASGGGSGGSK 223
>gi|14589935 protocadherin 7 isoform c precursor [Homo sapiens]
Length = 1200
Score = 32.0 bits (71), Expect = 0.11
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 6/40 (15%)
Query: 3 PVGGRPAAQSGGDGGGLPRRAGAEPGDRGGGSGGTMPGGR 42
P GG A GG GG R +E G GGT PGGR
Sbjct: 207 PGGGGNGASGGGSGGSKRRLDASE------GGGGTNPGGR 240
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Query: 13 GGDGGGLPRRAGAE-----PGDRGGGSGGTMPGGRR 43
GG GG RRAGA PG G G+ G GG +
Sbjct: 188 GGGSGGESRRAGAADSAPYPGGGGNGASGGGSGGSK 223
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.142 0.456
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,214,412
Number of Sequences: 37866
Number of extensions: 186206
Number of successful extensions: 3207
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 134
Number of HSP's that attempted gapping in prelim test: 1657
Number of HSP's gapped (non-prelim): 1260
length of query: 53
length of database: 18,247,518
effective HSP length: 27
effective length of query: 26
effective length of database: 17,225,136
effective search space: 447853536
effective search space used: 447853536
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.