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Search of human proteins with 239741571
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo
sapiens]
(179 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169164209 PREDICTED: hypothetical protein [Homo sapiens] 365 e-101
gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo ... 365 e-101
gi|169163999 PREDICTED: hypothetical protein [Homo sapiens] 169 1e-42
gi|110832843 TBP-associated factor 4 [Homo sapiens] 56 2e-08
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 56 2e-08
gi|209862765 RUN and SH3 domain containing 2 [Homo sapiens] 54 7e-08
gi|55741719 RUN and SH3 domain containing 2 [Homo sapiens] 54 7e-08
gi|156523244 membrane-associated ring finger (C3HC4) 11 [Homo sa... 52 2e-07
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 52 4e-07
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 51 5e-07
gi|18079216 CASK interacting protein 1 [Homo sapiens] 50 8e-07
gi|56549694 enabled homolog isoform a [Homo sapiens] 50 1e-06
gi|39930375 enabled homolog isoform b [Homo sapiens] 50 1e-06
gi|33356148 formin-like 1 [Homo sapiens] 50 1e-06
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 49 2e-06
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 49 2e-06
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 49 3e-06
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ... 49 3e-06
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ... 49 3e-06
gi|150417989 cyclin K isoform 1 [Homo sapiens] 48 5e-06
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 47 9e-06
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 47 9e-06
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 47 9e-06
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 47 9e-06
gi|56118221 amyloid beta (A4) precursor protein-binding, family ... 47 9e-06
gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens] 47 9e-06
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 47 9e-06
gi|210032580 SET domain containing 1B [Homo sapiens] 47 9e-06
gi|157168329 formin 1 [Homo sapiens] 47 1e-05
gi|210031233 PR domain containing 6 [Homo sapiens] 47 1e-05
>gi|169164209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 179
Score = 365 bits (937), Expect = e-101
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 1 MAGASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPS 60
MAGASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPS
Sbjct: 1 MAGASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPS 60
Query: 61 HASTSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGTVAAA 120
HASTSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGTVAAA
Sbjct: 61 HASTSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGTVAAA 120
Query: 121 AGLGARRARRLHLRGQIGVRRVAGTPEARGRGDGCSLGRVSPDRTPGKGSKGMEPPHTG 179
AGLGARRARRLHLRGQIGVRRVAGTPEARGRGDGCSLGRVSPDRTPGKGSKGMEPPHTG
Sbjct: 121 AGLGARRARRLHLRGQIGVRRVAGTPEARGRGDGCSLGRVSPDRTPGKGSKGMEPPHTG 179
>gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo
sapiens]
Length = 179
Score = 365 bits (937), Expect = e-101
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 1 MAGASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPS 60
MAGASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPS
Sbjct: 1 MAGASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPS 60
Query: 61 HASTSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGTVAAA 120
HASTSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGTVAAA
Sbjct: 61 HASTSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGTVAAA 120
Query: 121 AGLGARRARRLHLRGQIGVRRVAGTPEARGRGDGCSLGRVSPDRTPGKGSKGMEPPHTG 179
AGLGARRARRLHLRGQIGVRRVAGTPEARGRGDGCSLGRVSPDRTPGKGSKGMEPPHTG
Sbjct: 121 AGLGARRARRLHLRGQIGVRRVAGTPEARGRGDGCSLGRVSPDRTPGKGSKGMEPPHTG 179
>gi|169163999 PREDICTED: hypothetical protein [Homo sapiens]
Length = 84
Score = 169 bits (428), Expect = 1e-42
Identities = 84/84 (100%), Positives = 84/84 (100%)
Query: 96 MGLGRTQRAARVAVSRALAGTVAAAAGLGARRARRLHLRGQIGVRRVAGTPEARGRGDGC 155
MGLGRTQRAARVAVSRALAGTVAAAAGLGARRARRLHLRGQIGVRRVAGTPEARGRGDGC
Sbjct: 1 MGLGRTQRAARVAVSRALAGTVAAAAGLGARRARRLHLRGQIGVRRVAGTPEARGRGDGC 60
Query: 156 SLGRVSPDRTPGKGSKGMEPPHTG 179
SLGRVSPDRTPGKGSKGMEPPHTG
Sbjct: 61 SLGRVSPDRTPGKGSKGMEPPHTG 84
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 55.8 bits (133), Expect = 2e-08
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 5 SAARAAPSPILP-PPPDLPPTPTRRAPLIGC--PPSPARPAPSASPSPSR-AAGPFLPPS 60
S P+ +LP P P P T + P +G PP+PA P+P A+P+P+ AA P PP
Sbjct: 216 SLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPP 275
Query: 61 HASTSSRSP-----PPRARRTEPAVPPSCGSGPGAAGA 93
+T +R P PP A P PP+ G+AGA
Sbjct: 276 APATLARPPGHPAGPPTAAPAVP--PPAAAQNGGSAGA 311
Score = 45.1 bits (105), Expect = 3e-05
Identities = 42/118 (35%), Positives = 50/118 (42%), Gaps = 11/118 (9%)
Query: 11 PSPILP--PPPDLPPTPTRRAPLIG----CPPSPARPAPSASPSPSRAAGPFLPPSHAST 64
PSP P P PP R P G C P PA A +A P P+ AGP P A+
Sbjct: 108 PSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPA-PAGPAKPAGPAAL 166
Query: 65 SSRSPPPRARRTEPAVPPSCG--SGPGAAGALR--MGLGRTQRAARVAVSRALAGTVA 118
++R+ P P P G +GPGAA L L + AA AVS G A
Sbjct: 167 AARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAA 224
Score = 44.7 bits (104), Expect = 4e-05
Identities = 38/101 (37%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
Query: 4 ASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHAS 63
A+ A AP PPP P P PPSP RP A P+P A PP S
Sbjct: 76 AAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAP--PAAKLRPPPEGS 133
Query: 64 TSSRSPPPRARRT----EPA-VPPSCGSGPGAAGALRMGLG 99
S +P P A EPA P+ +GP AA A R G G
Sbjct: 134 AGSCAPVPAAAAVAAGPEPAPAGPAKPAGP-AALAARAGPG 173
Score = 40.8 bits (94), Expect = 6e-04
Identities = 41/129 (31%), Positives = 50/129 (38%), Gaps = 17/129 (13%)
Query: 2 AGASAARAAPSPILPP--------PPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAA 53
A A A AAPSP P PP PP P A G P P AP A P P+ A
Sbjct: 246 AAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAP-AVPPPAAA- 303
Query: 54 GPFLPPSHASTSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRAL 113
+ ++ +P P PA S GPGAA A + + RV +
Sbjct: 304 ------QNGGSAGAAPAPAPAAGGPA-GVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPP 356
Query: 114 AGTVAAAAG 122
A AA+G
Sbjct: 357 AAQTLAASG 365
Score = 40.4 bits (93), Expect = 8e-04
Identities = 48/175 (27%), Positives = 58/175 (33%), Gaps = 59/175 (33%)
Query: 4 ASAARAAPSPILPPPPDLPPT----------PTRRAPLIGCP--------------PSPA 39
A+ A AAP+ PPPP P T P AP + P P+PA
Sbjct: 259 AAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPA 318
Query: 40 RPAP---SASPSPSRAAGPFLPPSHASTSSR---SPPPRARR------------------ 75
P S P P AA P A + R + PP A+
Sbjct: 319 AGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPT 378
Query: 76 ------TEPAVPPSCGSGP-----GAAGALRMGLGRTQRAARVAVSRALAGTVAA 119
+ AVPP P GAAGA+ L RT A + L TV A
Sbjct: 379 MQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIRATLTPTVLA 433
Score = 30.4 bits (67), Expect = 0.85
Identities = 40/150 (26%), Positives = 50/150 (33%), Gaps = 16/150 (10%)
Query: 22 PPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSPPPRARR------ 75
P TP RA G + S SP+ + AGP P A ++ PPP R
Sbjct: 45 PRTPEVRAAAAG---ALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGG 101
Query: 76 TEPAVPPS-------CGSGPGAAGALRMGLGRTQRAARVAVSRALAGTVAAAAGLGARRA 128
+ PPS G P AA G A V + A+A A A+ A
Sbjct: 102 PQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPA 161
Query: 129 RRLHLRGQIGVRRVAGTPEARGRGDGCSLG 158
L + G G G G G G
Sbjct: 162 GPAALAARAGPGPGPGPGPGPGPGPGKPAG 191
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 55.8 bits (133), Expect = 2e-08
Identities = 58/182 (31%), Positives = 71/182 (39%), Gaps = 28/182 (15%)
Query: 2 AGASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSH 61
A +AA AA +P P P P R APL PP+PA P A P+ R A PP+
Sbjct: 148 APRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAP---PPAV 204
Query: 62 ASTSSRSPPPRARRTEP---AVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGTVA 118
A+ PPP P PP P GA+R G AAR R + +
Sbjct: 205 AAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAG-----GAARPVSLREVVRYLG 259
Query: 119 AAAGLGARRARRLHLRGQIGVRRVAGTPE----ARGRGDGCSLGRVSPDRTPGKGSKGME 174
+ G G R R RV G E ARGR + LG ++ P G
Sbjct: 260 GSGGAGGRLTR----------GRVQGLLEEEAAARGRLERTRLGALA---LPRGDRPGRA 306
Query: 175 PP 176
PP
Sbjct: 307 PP 308
Score = 47.0 bits (110), Expect = 9e-06
Identities = 34/96 (35%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 5 SAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPA-RPAPSASPSPSRAAGPFLPPSHAS 63
+AAR P P P PP R AP +P PAP P+P AA P P A+
Sbjct: 95 NAARVQP-PRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAA 153
Query: 64 TSSRSPP--------PRARRTEP-AVPPSCGSGPGA 90
++ +PP PRA+R P A PP + P A
Sbjct: 154 AAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPA 189
Score = 41.6 bits (96), Expect = 4e-04
Identities = 37/107 (34%), Positives = 45/107 (42%), Gaps = 11/107 (10%)
Query: 25 PTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSP--PPRARRTEPAVPP 82
P RR PP R AP+A+ + + P PP A ++ +P PRA PP
Sbjct: 101 PPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPP 160
Query: 83 SCGSGPGAAGALRMGLGRTQRAARVAV-SRALAGTVAAAAGLGARRA 128
S GP G R QRAA +A A A A A G RRA
Sbjct: 161 S--PGPAQPGP------RAQRAAPLAAPPPAPAAPPAVAPPAGPRRA 199
Score = 26.9 bits (58), Expect = 9.4
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 2 AGASAARAAPSPILPPPPDLPPTPTRRAPLIGCPP 36
A + +PSP+ P PP P P GCPP
Sbjct: 417 ASVATGPDSPSPV-PLPPGKPALPGADGTPFGCPP 450
>gi|209862765 RUN and SH3 domain containing 2 [Homo sapiens]
Length = 1516
Score = 53.9 bits (128), Expect = 7e-08
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 1 MAGASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPS 60
+A +A + P+P P P R A G P +RP+P S SP R+ GPF P +
Sbjct: 734 LAAPAAQVSVPAPSGEPQASTPRATGRGARKAGSEPETSRPSPLGSYSPIRSVGPFGPST 793
Query: 61 HASTS-SRSPPPRARRTEPAVPPSCGSGPGA 90
+S S S SPPP ++PP S P A
Sbjct: 794 DSSASTSCSPPPEQPTATESLPPWSHSCPSA 824
>gi|55741719 RUN and SH3 domain containing 2 [Homo sapiens]
Length = 1516
Score = 53.9 bits (128), Expect = 7e-08
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 1 MAGASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPS 60
+A +A + P+P P P R A G P +RP+P S SP R+ GPF P +
Sbjct: 734 LAAPAAQVSVPAPSGEPQASTPRATGRGARKAGSEPETSRPSPLGSYSPIRSVGPFGPST 793
Query: 61 HASTS-SRSPPPRARRTEPAVPPSCGSGPGA 90
+S S S SPPP ++PP S P A
Sbjct: 794 DSSASTSCSPPPEQPTATESLPPWSHSCPSA 824
>gi|156523244 membrane-associated ring finger (C3HC4) 11 [Homo
sapiens]
Length = 402
Score = 52.4 bits (124), Expect = 2e-07
Identities = 44/133 (33%), Positives = 52/133 (39%), Gaps = 18/133 (13%)
Query: 3 GASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHA 62
GA + A P P PPPP P P AP + P P P++ +P RAAGP P
Sbjct: 14 GAESGDAEPPPQPPPPPPPTPPPGEPAP-VPAAPRYLPPLPASPETPERAAGPSEPLGEV 72
Query: 63 STSSRSPPPRARRTEPAVPP-----SCGSGPGAAGALRMGLGRTQRAARVAVSRALAGTV 117
+ PR R + PP G AAG G R AA A G
Sbjct: 73 A-------PRCRGADELPPPPLPLQPAGQEVAAAGDSGEGPRRLPEAA-----AAKGGPG 120
Query: 118 AAAAGLGARRARR 130
+ AG G R RR
Sbjct: 121 ESEAGAGGERERR 133
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 51.6 bits (122), Expect = 4e-07
Identities = 39/100 (39%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 8 RAAPSPILPP---PPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSR---AAGPFLPPSH 61
R AP P P PP PP P P PP PAR + P PSR AA P PPS
Sbjct: 274 RQAPPPPPPSRGGPPPPPPPPHNSGP----PPPPARGRGAPPPPPSRAPTAAPPPPPPSR 329
Query: 62 ASTSSRSPPPRAR--RTEPAVPPSCGSGPGAAGALRMGLG 99
S + PPP PA+P S SGP +G+G
Sbjct: 330 PSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVG 369
Score = 45.1 bits (105), Expect = 3e-05
Identities = 28/75 (37%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 16 PPPP----DLPPTPTRRAPLIGCPPSP-ARPAPSASPSPSRAAGPFLP---PSHASTSSR 67
PPPP PP P RAP PP P +RP+ + P P P P PS A +
Sbjct: 300 PPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPP 359
Query: 68 SPPPRARRTEPAVPP 82
PPP P PP
Sbjct: 360 PPPPSVLGVGPVAPP 374
Score = 42.0 bits (97), Expect = 3e-04
Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 3 GASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPAR---PAPSASPSPSRAAGPFLPP 59
GA + +P PPP P P+ P PP P R P P A PS + + P PP
Sbjct: 308 GAPPPPPSRAPTAAPPPPPPSRPSVAVP----PPPPNRMYPPPPPALPSSAPSGPPPPPP 363
Query: 60 SHASTSSRSPPPRARRTEPAVPP 82
S +PPP P PP
Sbjct: 364 SVLGVGPVAPPPPPPPPPPPGPP 386
Score = 30.8 bits (68), Expect = 0.65
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 7 ARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSP 49
A + +P PPPP PP+ P+ PP P P P P P
Sbjct: 349 ALPSSAPSGPPPP--PPSVLGVGPVAPPPPPPPPPPPGPPPPP 389
Score = 30.8 bits (68), Expect = 0.65
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 6/40 (15%)
Query: 13 PILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRA 52
P+ PPPP PP P G PP P P+ P+ A
Sbjct: 370 PVAPPPPPPPPPPP------GPPPPPGLPSDGDHQVPTTA 403
Score = 28.5 bits (62), Expect = 3.2
Identities = 25/96 (26%), Positives = 34/96 (35%), Gaps = 4/96 (4%)
Query: 5 SAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHAS- 63
S+A + P P PPP L P P PP P P P PS P + A+
Sbjct: 352 SSAPSGPPP--PPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLPSDGDHQVPTTAGNKAAL 409
Query: 64 -TSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGL 98
R + + + P SC +R G+
Sbjct: 410 LDQIREGAQLKKVEQNSRPVSCSGRDALLDQIRQGI 445
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 51.2 bits (121), Expect = 5e-07
Identities = 48/157 (30%), Positives = 67/157 (42%), Gaps = 30/157 (19%)
Query: 1 MAGASAARAAPSP-----ILPPPPDL--PPTPTRRAPLIGCPPSPARPAPSASPSPSRAA 53
+ G + R+ P P I PPPP PP P R P PP+ R P P P A
Sbjct: 331 IVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPG-AG 389
Query: 54 GPFL-------PPSHASTSSRSPPPRARRTEPAVPPSCGSGPGAA-GAL----RMGL--- 98
GP + PP +S + +PPP PA+ P+ G PG GAL R G+
Sbjct: 390 GPPMPPPPPPPPPPPSSGNGPAPPP----LPPALVPAGGLAPGGGRGALLDQIRQGIQLN 445
Query: 99 ---GRTQRAARVAVSRALAGTVAAAAGLGARRARRLH 132
G + +A ++ G V A + +R+R +H
Sbjct: 446 KTPGAPESSALQPPPQSSEGLVGALMHVMQKRSRAIH 482
Score = 39.7 bits (91), Expect = 0.001
Identities = 36/116 (31%), Positives = 41/116 (35%), Gaps = 31/116 (26%)
Query: 16 PPPPDLPPTPTRRAPLIG--------CPPSP---ARPAPS--ASPSPSRAAGPFLPPSHA 62
PPPP R P++G PP P A P P+ P P R P PP
Sbjct: 316 PPPPSRGGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRGGPPPPPPPAT 375
Query: 63 STSSRSPPPRARRTEPAV---------PPSCGSGPG---------AAGALRMGLGR 100
S PPP P + PPS G+GP AG L G GR
Sbjct: 376 GRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPPALVPAGGLAPGGGR 431
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 50.4 bits (119), Expect = 8e-07
Identities = 32/93 (34%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 7 ARAAPSPILPPPPDLPPTPTRRAPLIGCP-----PSPARPAPSASPSPSRAAGPFLPPSH 61
A P P+ P PP P P + G P PSPA P+P+ P + A P PPS
Sbjct: 1263 AHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPA-PSPARQPPAALAKPPGTPPSL 1321
Query: 62 ASTSSRSPPPRARRTE-PAVPPSCGSGPGAAGA 93
++ ++ P P A PA PP + AA A
Sbjct: 1322 GASPAKPPSPGAPALHVPAKPPRAAAAAAAAAA 1354
Score = 43.5 bits (101), Expect = 1e-04
Identities = 42/130 (32%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 10 APSPILPPP-PDLP--PTPT-RRAPLIGC-------------PPSPARPAPSASPSPSRA 52
+P P+L P P L PTPT ++ PL G P SP P P +P P +A
Sbjct: 1227 SPKPVLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKA 1286
Query: 53 AGPFLPPSHASTSSRSP---PPRARRTEPAVPPSCGSGPG-----AAGALRMGLGRTQRA 104
S + + SP PP A P PPS G+ P A AL + + RA
Sbjct: 1287 VAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVP-AKPPRA 1345
Query: 105 ARVAVSRALA 114
A A + A A
Sbjct: 1346 AAAAAAAAAA 1355
Score = 40.0 bits (92), Expect = 0.001
Identities = 33/100 (33%), Positives = 41/100 (41%), Gaps = 15/100 (15%)
Query: 5 SAARAAPSPILPPPPDLPPTPTRRAPLIGCPP------SPARPAPSASPSPSRAAGPFLP 58
++ +A P + PPPP P PT A L PP PA+P S P ++ P L
Sbjct: 1182 ASEQAGPPELPPPPPPAEPPPTDLAHLPPLPPPEGEARKPAKPPVSPKPVLTQPV-PKLQ 1240
Query: 59 PSHASTSSRSPPP--------RARRTEPAVPPSCGSGPGA 90
S TS + P P RA T P V P P A
Sbjct: 1241 GSPTPTSKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTA 1280
Score = 38.1 bits (87), Expect = 0.004
Identities = 31/90 (34%), Positives = 38/90 (42%), Gaps = 11/90 (12%)
Query: 1 MAGASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPS-PARPAPSASPSPSRAAGPFLPP 59
+AG + A PSP P P PP + P G PPS A PA SP P PP
Sbjct: 1287 VAGLPSGSAGPSPA-PSPARQPPAALAKPP--GTPPSLGASPAKPPSPGAPALHVPAKPP 1343
Query: 60 SHASTSSRSPPPRARRTEPAVPPSCGSGPG 89
A+ ++ A P PP G+ PG
Sbjct: 1344 RAAAAAA------AAAAAPPAPPE-GASPG 1366
Score = 34.3 bits (77), Expect = 0.059
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 27/125 (21%)
Query: 5 SAARAAPSP-ILPP------PPDLPPTPTRRAPLIGCPP------SPARPAPSASPSPSR 51
+ A+ P+P +LPP P LP +PT R P PA P P+ P P+
Sbjct: 800 ATAKVKPTPQLLPPTERPMSPRSLPQSPTHRGFAYVLPQPVEGEVGPAAPGPAPPPVPTA 859
Query: 52 AAGPFLPP------------SHASTSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLG 99
LPP +H+ + R E VP +GP A R+G
Sbjct: 860 VPTLCLPPEADAEPGRPKKRAHSLNRYAASDSEPERDELLVP--AAAGPYATVQRRVGRS 917
Query: 100 RTQRA 104
+ RA
Sbjct: 918 HSVRA 922
Score = 28.9 bits (63), Expect = 2.5
Identities = 23/83 (27%), Positives = 28/83 (33%), Gaps = 15/83 (18%)
Query: 11 PSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSPP 70
P+P PP P PP P +P LPP TS +PP
Sbjct: 733 PAPGTPPREARPGRHGHSIKRASVPPVPGKPR------------QVLPP---GTSHFTPP 777
Query: 71 PRARRTEPAVPPSCGSGPGAAGA 93
+T P P + G G A A
Sbjct: 778 QTPTKTRPGSPQALGGPHGPAPA 800
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 50.1 bits (118), Expect = 1e-06
Identities = 43/145 (29%), Positives = 55/145 (37%), Gaps = 29/145 (20%)
Query: 16 PPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSPPPRARR 75
PPPP LPP P + + + PP P P P PS GP PP PPP +
Sbjct: 314 PPPPPLPPGPAQAS--VALPPPPGPPPPPPLPS----TGPPPPP--------PPPPLPNQ 359
Query: 76 TEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGTVAAAAGLGARRARRLHLR- 134
P PP A+G + +R L G AA AG R+ R+
Sbjct: 360 VPPPPPPPPAPPLPASGFFLASMSED--------NRPLTGLAAAIAGAKLRKVSRMEDTS 411
Query: 135 -----GQIGVRRVAGTPEARGRGDG 154
IGV + + GRG+G
Sbjct: 412 FPSGGNAIGVNSASSKTDT-GRGNG 435
Score = 31.6 bits (70), Expect = 0.38
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 11 PSPILPPPPDLPPTPTRRAPLIGCPPSPARPA 42
PS PPPP PP P + P PP+P PA
Sbjct: 343 PSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPA 374
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 50.1 bits (118), Expect = 1e-06
Identities = 43/145 (29%), Positives = 55/145 (37%), Gaps = 29/145 (20%)
Query: 16 PPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSPPPRARR 75
PPPP LPP P + + + PP P P P PS GP PP PPP +
Sbjct: 314 PPPPPLPPGPAQAS--VALPPPPGPPPPPPLPS----TGPPPPP--------PPPPLPNQ 359
Query: 76 TEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGTVAAAAGLGARRARRLHLR- 134
P PP A+G + +R L G AA AG R+ R+
Sbjct: 360 VPPPPPPPPAPPLPASGFFLASMSED--------NRPLTGLAAAIAGAKLRKVSRMEDTS 411
Query: 135 -----GQIGVRRVAGTPEARGRGDG 154
IGV + + GRG+G
Sbjct: 412 FPSGGNAIGVNSASSKTDT-GRGNG 435
Score = 31.6 bits (70), Expect = 0.38
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 11 PSPILPPPPDLPPTPTRRAPLIGCPPSPARPA 42
PS PPPP PP P + P PP+P PA
Sbjct: 343 PSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPA 374
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 50.1 bits (118), Expect = 1e-06
Identities = 38/106 (35%), Positives = 44/106 (41%), Gaps = 12/106 (11%)
Query: 3 GASAARAAPSPILPPPPDLPPT-PTRRAPLIGCP-PSPARPAPSASPSPSRAAGPFLPPS 60
GA+ P P LP P + PP+ P + PL G P P PA P P P P P PP
Sbjct: 539 GAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPP-----PPPPPP 593
Query: 61 HASTSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAAR 106
T PPP P PP G P A G LG +A +
Sbjct: 594 PPGTDGPVPPP-----PPPPPPPPGGPPDALGRRDSELGPGVKAKK 634
Score = 37.4 bits (85), Expect = 0.007
Identities = 32/91 (35%), Positives = 36/91 (39%), Gaps = 18/91 (19%)
Query: 10 APSPILP---PPPDLPP--------TPTRRAPLIGCPPSPARPAPSASP-SPSRAAGPFL 57
AP+P +P P PDL P P PL G PSP PSA P +P P
Sbjct: 516 APTPGVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGL-PSPQEAPPSAPPQAPPLPGSPEP 574
Query: 58 PPSHASTSSRSPPPRARRTEPAVPPSCGSGP 88
PP+ PPP P PP GP
Sbjct: 575 PPAPPLPGDLPPPP-----PPPPPPPGTDGP 600
Score = 31.2 bits (69), Expect = 0.50
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 6/68 (8%)
Query: 11 PSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSPP 70
P P P P DLPP P PP P P P P P PP
Sbjct: 574 PPPAPPLPGDLPPPPPPP------PPPPGTDGPVPPPPPPPPPPPGGPPDALGRRDSELG 627
Query: 71 PRARRTEP 78
P + +P
Sbjct: 628 PGVKAKKP 635
Score = 29.6 bits (65), Expect = 1.4
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 9/62 (14%)
Query: 30 PLIGCPPSPARP--------APSASPSPSRAAGPFLPPSHASTSSRSPPPRARRTEPAVP 81
P G P+P P AP+A P+P AA P PP S + PP A P +P
Sbjct: 511 PSGGDAPTPGVPTGSPSPDLAPAAEPAPG-AAPPPPPPLPGLPSPQEAPPSAPPQAPPLP 569
Query: 82 PS 83
S
Sbjct: 570 GS 571
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 49.3 bits (116), Expect = 2e-06
Identities = 32/79 (40%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 7 ARAAPSP---ILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHAS 63
AR P P P P LPP+P PL PPSP+ P PS PS P PPS A
Sbjct: 314 ARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAP-PSLQTLPS---PPATPPSQAP 369
Query: 64 TSSRSPPPRARRTEPAVPP 82
S +PP +A + +PP
Sbjct: 370 PSMTTPPMQAPPSLQTIPP 388
Score = 42.4 bits (98), Expect = 2e-04
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 8 RAAPSPILPPPPDLPPTPTRRAPL----------IGCPPSPARPAPSASPSPSRAAGPFL 57
+A PSP PP TP+ +AP PPSP AP + P+ +
Sbjct: 631 QAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSAT 690
Query: 58 PPSHASTSSRSPPPRARRTEPAVPP 82
PPS A S +PP + + PA PP
Sbjct: 691 PPSQAPPSLAAPPLQVPPSPPASPP 715
Score = 40.8 bits (94), Expect = 6e-04
Identities = 58/198 (29%), Positives = 77/198 (38%), Gaps = 30/198 (15%)
Query: 2 AGASA---ARAAPSPILPPPP--DLPPTPTRRAPL--------IGCPPSPARPAPSASPS 48
AGA+A A AP + P PP PP P A L +G P R +
Sbjct: 10 AGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGAT 69
Query: 49 PSRAAGPFLPPSHASTSSRSP---PPRARRTEPAVPPSCGSGPG-------AAGALRMG- 97
+A P A TSSR+P PP + R E A PP+ + PG A+G R G
Sbjct: 70 IPESAPRAGPTRSAGTSSRNPASRPPASGRGERA-PPAKNTSPGPVSSPGRASGTTRPGP 128
Query: 98 LGRTQRAARVAVSRALA---GTVAAAAGLGARRARRLHLRGQIGVRRVAGTPEARGRGDG 154
LG Q+ R++ +A T A + ARR G A +R G
Sbjct: 129 LG--QKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTE 186
Query: 155 CSLGRVSPDRTPGKGSKG 172
L R +P P ++G
Sbjct: 187 VGLPRPAPSARPRPPTEG 204
Score = 40.8 bits (94), Expect = 6e-04
Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 12 SPILPPPPDLPPTPTRRAPLIGCPPSP-ARP--APSASPSPSR--------AAGPFLPPS 60
SP+ PPP PP P + PPSP A P +P A+PSP PF PP
Sbjct: 612 SPLATPPPQAPPXLA--LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPP 669
Query: 61 HASTSSRSPPPRARRTEPAVPPSCGSGPGAA 91
+ PP + P+ P + P A
Sbjct: 670 SPPVQAPFSPPASPPVSPSATPPSQAPPSLA 700
Score = 40.0 bits (92), Expect = 0.001
Identities = 27/77 (35%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 10 APSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASP---SPSRAAGPF-LPPSHASTS 65
AP P+ PP L P I PP A PA ++ P PS P PP A
Sbjct: 565 APCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPX 624
Query: 66 SRSPPPRARRTEPAVPP 82
PP +A + PA PP
Sbjct: 625 LALPPLQAPPSPPASPP 641
Score = 40.0 bits (92), Expect = 0.001
Identities = 34/94 (36%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 4 ASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPF-LPPSHA 62
A A +P PPP PP +P P SP+ PS +P PS AA P +PPS
Sbjct: 655 ALAVHLLQAPFSPPPS--PPVQAPFSPPASPPVSPSATPPSQAP-PSLAAPPLQVPPSPP 711
Query: 63 STS----SRSPPPRARRTEPA----VPPSCGSGP 88
++ S +PPP+A A VPPS + P
Sbjct: 712 ASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASP 745
Score = 40.0 bits (92), Expect = 0.001
Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 4 ASAARAAPSPILPPPPDLPPTPTRRAPLI-GCPPSPARPAPSASPSPSRAAGPFLPPSHA 62
A+ AP + PP +PP+P P+ P P P P A+P P P S
Sbjct: 689 ATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSP--PASPP 746
Query: 63 STSSRSPPPRARRTEPAVPPSCGSGP 88
+ S +PPPR VPP + P
Sbjct: 747 MSPSATPPPR-------VPPLLAAPP 765
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 12 SPILPPP-PDLPPT---PTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSR 67
+P PP P + P+ P++ P + PP P+P ASP S +A PP A
Sbjct: 675 APFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSA---TPPPQAPPPLA 731
Query: 68 SPPPRARRTEPAVPP 82
+PP + + PA PP
Sbjct: 732 APPLQVPPSPPASPP 746
Score = 39.7 bits (91), Expect = 0.001
Identities = 32/88 (36%), Positives = 37/88 (42%), Gaps = 17/88 (19%)
Query: 12 SPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSPPP 71
SP+ PPP PP APL+ PPSP ASP+ P PP+ +S S P
Sbjct: 822 SPLATPPPQAPPVLA--APLLQVPPSP-----PASPT---LQAPRRPPTPGPDTSVSGPR 871
Query: 72 RARRTEPAVPP-------SCGSGPGAAG 92
P PP S SGP AG
Sbjct: 872 LTLALAPGPPPPPSRSPSSTLSGPDLAG 899
Score = 38.9 bits (89), Expect = 0.002
Identities = 38/121 (31%), Positives = 47/121 (38%), Gaps = 12/121 (9%)
Query: 2 AGASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSH 61
AGA + P+P P P RR+ G RPAPSA P P GP S
Sbjct: 158 AGARRDTSGPTPGTPSP-----AMARRSRAAGTEVGLPRPAPSARPRPP-TEGPRKSVSS 211
Query: 62 AST-SSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGTVAAA 120
AS S+ P P ARR PS G G + + T ++ + GT A
Sbjct: 212 ASEHSTTEPSPAARRR-----PSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAP 266
Query: 121 A 121
A
Sbjct: 267 A 267
Score = 38.5 bits (88), Expect = 0.003
Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 14/96 (14%)
Query: 3 GASAARAAPSPILPP------PPDLPPTPTRRAPLIGCPPSPARPAPSASPSPS-RAAGP 55
G A A PS P PP + P AP +G P +P A+PSPS A P
Sbjct: 261 GTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALG----PLSSSPLATPSPSGTKARP 316
Query: 56 FLPPSHAST---SSRSPPPRARRTEPAVPPSCGSGP 88
PP +A+T ++ P P P PPS + P
Sbjct: 317 VPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPP 352
Score = 38.5 bits (88), Expect = 0.003
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 9 AAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPF-LPPSHASTSSR 67
A P P PPP PP +P P SP+ P P P AA P +PPS ++
Sbjct: 720 ATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVP-PLLAAPPLQVPPSPPASLPM 778
Query: 68 SPPPRARRTEPAVPPSCGSGP 88
SP + P PP+ + P
Sbjct: 779 SP---LAKPPPQAPPALATPP 796
Score = 37.7 bits (86), Expect = 0.005
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 12 SPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSR-----AAGPFLPPSHASTSS 66
+P+L PP P +PT +A P P P P S S R A GP PPS + +S+
Sbjct: 837 APLLQVPPSPPASPTLQA-----PRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSST 891
Query: 67 RSPPPRARRTEPA 79
S P A + A
Sbjct: 892 LSGPDLAGHSSSA 904
Score = 37.4 bits (85), Expect = 0.007
Identities = 29/94 (30%), Positives = 35/94 (37%), Gaps = 19/94 (20%)
Query: 9 AAPSPILPPPPDLPP--------------TPTRRAPLIGCPPSPARPAPSASP--SPSRA 52
A P P PP PP P + P + PP A P+P ASP SP
Sbjct: 588 ATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLAT 647
Query: 53 AGPFLPPS---HASTSSRSPPPRARRTEPAVPPS 83
P P + H + SPPP P PP+
Sbjct: 648 PSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPA 681
Score = 37.0 bits (84), Expect = 0.009
Identities = 25/84 (29%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 10 APSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASP----SPSRAAGPF-LPPSHAST 64
AP + PP L P P + PP AP +P P A P PPS +T
Sbjct: 519 APPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTT 578
Query: 65 SSRSPPPRARRTEPAVPPSCGSGP 88
P P PP+ S P
Sbjct: 579 PPPETPSSIATPPPQAPPALASPP 602
Score = 36.2 bits (82), Expect = 0.015
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 20/100 (20%)
Query: 9 AAPSPILPP-----PPDLPPTPTRRAPLI-------GCPPSPARPAPSASPSPSRA---A 53
A P P +PP P +PP+P P+ PP+ A P A PSP +
Sbjct: 751 ATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQ 810
Query: 54 GPFLPPSHASTSS-RSPPPRARRTEPA----VPPSCGSGP 88
PF P + S +PPP+A A VPPS + P
Sbjct: 811 APFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASP 850
Score = 35.4 bits (80), Expect = 0.026
Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 9 AAPSPILPPPPDLPPT----PTRRA-PLIGCPPSPARPAPSASPSPSRAAGPFLPPSHAS 63
A P P+ PP P PP+ P+ A P PPS P A PS +P S S
Sbjct: 338 ATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTS 397
Query: 64 TSSRSPPPRARRTEPAVPPSCGS 86
S ++PP + S GS
Sbjct: 398 PSLQAPPSPLALSSLQATTSLGS 420
Score = 35.4 bits (80), Expect = 0.026
Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 10/81 (12%)
Query: 8 RAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSR 67
+A PSP+ PPP+ P + I PP A P A SP P P S +T
Sbjct: 570 QAPPSPLTTPPPETPSS-------IATPPPQA---PPALASPPLQGLPSPPLSPLATPPP 619
Query: 68 SPPPRARRTEPAVPPSCGSGP 88
PP PPS + P
Sbjct: 620 QAPPXLALPPLQAPPSPPASP 640
Score = 35.4 bits (80), Expect = 0.026
Identities = 35/102 (34%), Positives = 40/102 (39%), Gaps = 17/102 (16%)
Query: 12 SPILPPPPDLPPTPTRRAPLIGCPPSPA--------RPAPSASPSPSRAAGPFLPPSHAS 63
SP+ PPP PP PL P PA P+ S SP P PP A+
Sbjct: 779 SPLAKPPPQAPPA-LATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAA 837
Query: 64 TSSRSPP-PRARRT--EPAVPPSCG-----SGPGAAGALRMG 97
+ PP P A T P PP+ G SGP AL G
Sbjct: 838 PLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPG 879
Score = 32.7 bits (73), Expect = 0.17
Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 9/81 (11%)
Query: 5 SAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHAST 64
+A+ +P L PP P P + PPSP P +PS P PP+ AS
Sbjct: 548 TASAPLTTPHLETPPCPAPCP------LQAPPSPLTTPPPETPSSIATPPPQAPPALASP 601
Query: 65 SSR---SPPPRARRTEPAVPP 82
+ SPP T P P
Sbjct: 602 PLQGLPSPPLSPLATPPPQAP 622
Score = 31.6 bits (70), Expect = 0.38
Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 17/95 (17%)
Query: 11 PSPILPPPPDLPPT--PTRRAPLIGCPPS--PARPAP-----------SASPSPSRAAG- 54
P + PP D P P +PL PS ARP P + PSP A
Sbjct: 282 PPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPL 341
Query: 55 PFLPPSHASTSSRSPPPRARRTEPA-VPPSCGSGP 88
P PPS ++ S P T P+ PPS + P
Sbjct: 342 PLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPP 376
Score = 31.2 bits (69), Expect = 0.50
Identities = 26/69 (37%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
Query: 6 AARAAPSPILPPPPDLPPTPTRRAPLIGCPPSP--ARPAPSA---SPSPSRAAGPFLPPS 60
A R AP LP PP P I P A PAP A PSP + G +
Sbjct: 949 AFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGA 1008
Query: 61 HASTSSRSP 69
A SSRSP
Sbjct: 1009 GAGASSRSP 1017
Score = 30.8 bits (68), Expect = 0.65
Identities = 33/111 (29%), Positives = 39/111 (35%), Gaps = 39/111 (35%)
Query: 11 PSPILPPPPDLPP---TPTRRAPL-------IGCPPSPARPAPSASPSP---------SR 51
PSP PP PP TP +AP I P S P+ A PSP +
Sbjct: 358 PSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTS 417
Query: 52 AAGPFLPPSH--------------------ASTSSRSPPPRARRTEPAVPP 82
P L +H AST SPP +A + PA PP
Sbjct: 418 LGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPP 468
Score = 29.3 bits (64), Expect = 1.9
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 16/88 (18%)
Query: 11 PSPILPPPPDLPPTPTRRAPL-----IGCPPSPA---------RPAPSASPSPSRAAG-- 54
P + P PP+P + L +G P A R ++ SPSR A
Sbjct: 392 PHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTP 451
Query: 55 PFLPPSHASTSSRSPPPRARRTEPAVPP 82
P PP A S + PP PAV P
Sbjct: 452 PDSPPLQAPLSLPASPPLQTSLSPAVSP 479
Score = 29.3 bits (64), Expect = 1.9
Identities = 33/113 (29%), Positives = 42/113 (37%), Gaps = 23/113 (20%)
Query: 3 GASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSR----------- 51
G + + P L P PP P+R P A + SA+ +P
Sbjct: 862 GPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGG 921
Query: 52 -AAGPFLPPS------HASTSSRSP-PPRARRTEPAVPPSC--GSGPGAAGAL 94
AA P PP H + SR P PP A R P P +GPG+A L
Sbjct: 922 AAASP--PPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGL 972
Score = 28.5 bits (62), Expect = 3.2
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 37 SPARPAPSASPSPSRAAGPFLPPSHASTSSRSP---PPRARRTEPAVPPSCGS 86
SPAR PSA +P A P P + R P PPR + PA+ P S
Sbjct: 251 SPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPR-KDAAPALGPLSSS 302
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 49.3 bits (116), Expect = 2e-06
Identities = 34/87 (39%), Positives = 38/87 (43%), Gaps = 10/87 (11%)
Query: 12 SPILPPPPDLPPTPTRRAPLIGCPP--SPARPAPSASP-SPSRAAGPFLPPSHAS----- 63
SP+ PPP +LP +P A + PP SP P P SP SP A PP S
Sbjct: 552 SPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPP 611
Query: 64 --TSSRSPPPRARRTEPAVPPSCGSGP 88
S SPPP A R P S S P
Sbjct: 612 PEESPLSPPPEASRLSPPPEDSPMSPP 638
Score = 46.6 bits (109), Expect = 1e-05
Identities = 31/84 (36%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Query: 12 SPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSS----- 66
SP+ PPP P +P +PL SP PA SP A P PP S S
Sbjct: 501 SPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEE 560
Query: 67 --RSPPPRARRTEPAVPPSCGSGP 88
SPPP A R P S S P
Sbjct: 561 LPTSPPPEASRLSPPPEESPMSPP 584
Score = 42.7 bits (99), Expect = 2e-04
Identities = 32/98 (32%), Positives = 37/98 (37%), Gaps = 23/98 (23%)
Query: 12 SPILPPPPDLPPTPTRRAPLIGCPP--SPARPAPSASP-------------------SPS 50
SP+ PPP + P +P A + PP SP P P SP SP
Sbjct: 606 SPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPP 665
Query: 51 RAAGPFLPPSHASTSSRSPPPRARRTEPAVPPSCGSGP 88
P PP S + SPPP A R P S S P
Sbjct: 666 PEESPLSPPPEESPT--SPPPEASRLSPPPEDSPTSPP 701
Score = 41.2 bits (95), Expect = 5e-04
Identities = 29/76 (38%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 12 SPILPPPPDLPPTPTRRAPLIGCP--PSPARPAPSASP-SPSRAAGPFLP--PSHASTSS 66
S + PPP +LP +P A + P SP P P SP SP + PF P S S
Sbjct: 465 SRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPE 524
Query: 67 RSPPPRARRTEPAVPP 82
SPP A T + PP
Sbjct: 525 ESPPSPALETPLSPPP 540
Score = 40.4 bits (93), Expect = 8e-04
Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 6 AARAAP----SPILPPPPDLPPTPTRRAPLIGCPPSPAR--PAPSASP-SPSRAAGPFLP 58
A+R +P SP+ PPP + P +P + P +R P P SP SP P P
Sbjct: 623 ASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSP 682
Query: 59 PSHASTSSRSPPPRARRTEPAVPPSCGSGP 88
P A S SPPP T P S S P
Sbjct: 683 PPEA--SRLSPPPEDSPTSPPPEDSPASPP 710
Score = 40.0 bits (92), Expect = 0.001
Identities = 30/83 (36%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 9 AAPSPILPPPPDLPPTPTRRAPLIGCPPS--PARPAPSASP-SPSRAAGPFLPPSHASTS 65
A +P+ PPP P +P + PP P P P AS SP P PP S
Sbjct: 531 ALETPLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPP--PEES 588
Query: 66 SRSPPPRARRTEPAVPPSCGSGP 88
SPPP A R P S S P
Sbjct: 589 PMSPPPEASRLFPPFEESPLSPP 611
Score = 38.9 bits (89), Expect = 0.002
Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Query: 12 SPILPPPPDLPPTPT-RRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHAS------- 63
SP+ PPP + P +P +P SP P + PSP+ P PP AS
Sbjct: 492 SPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALET-PLSPPPEASPLSPPFE 550
Query: 64 TSSRSPPPRARRTEPAVPP 82
S SPPP T P PP
Sbjct: 551 ESPLSPPPEELPTSP--PP 567
Score = 37.7 bits (86), Expect = 0.005
Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Query: 6 AARAAP----SPILPPPPDLPPTPTRRAPLIGCP--PSPARPAPSASPSPSRAAGPFLPP 59
A+R +P SP PPP D P +P L+ P SP P P R+ GP L P
Sbjct: 686 ASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLLPLPEEPQLCPRSEGPHLSP 745
Query: 60 ----SHASTSSRSPPPRARRTEPAVPP 82
H S P + EP + P
Sbjct: 746 RPEEPHLSPRPEEPHLSPQAEEPHLSP 772
Score = 37.7 bits (86), Expect = 0.005
Identities = 31/92 (33%), Positives = 36/92 (39%), Gaps = 16/92 (17%)
Query: 9 AAPSPILPPPPDLPPTPTRRAPLIG---------CPPSPARPAPSASPSPSRAAGPFLPP 59
A P P PP PP P++G P P RP+ SPS LPP
Sbjct: 4279 AGPRPQGPPRLPAPPGALSTGPVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQLPP 4338
Query: 60 SHASTSSRSPPPRARRTEPAVPPSCGSGPGAA 91
+H T P P+ EP PP S P AA
Sbjct: 4339 THPGT----PKPQGPTLEP--PPGRVS-PAAA 4363
Score = 37.0 bits (84), Expect = 0.009
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 6 AARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPP--SHAS 63
AA +PI PPP P P+I PPSP P ASP P P H+
Sbjct: 974 AAPILETPISPPPEANCTDPEPVPPMI-LPPSPGSPVGPASPILMEPLPPQCSPLLQHSL 1032
Query: 64 TSSRSPPPRARRTEPAVPPSCGS 86
SPP + + PA+P S S
Sbjct: 1033 VPQNSPPSQC--SPPALPLSVPS 1053
Score = 35.8 bits (81), Expect = 0.020
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 12 SPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSPPP 71
+P+ P + P ++P +G P PA + +PSP F P S+ T + PP
Sbjct: 2329 APLTPRASQVEP----QSPGLGLRPQEPPPAQALAPSPPSHPDIFRPGSY--TDPYAQPP 2382
Query: 72 RARRTEPAVPPSCGSGP 88
R +P P SC + P
Sbjct: 2383 LTPRPQPPPPESCCALP 2399
Score = 35.4 bits (80), Expect = 0.026
Identities = 29/86 (33%), Positives = 35/86 (40%), Gaps = 15/86 (17%)
Query: 12 SPILPPPPDLPPTPTRRAPLIGCPP--SPARPAPS---ASPSPSRA-------AGPFLP- 58
SP+ PPP + P +P A + PP SP P P ASP P + P LP
Sbjct: 669 SPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLLPL 728
Query: 59 PSHASTSSRSPPPR--ARRTEPAVPP 82
P RS P R EP + P
Sbjct: 729 PEEPQLCPRSEGPHLSPRPEEPHLSP 754
Score = 35.0 bits (79), Expect = 0.034
Identities = 49/185 (26%), Positives = 64/185 (34%), Gaps = 20/185 (10%)
Query: 10 APSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLP-PSHASTSSRS 68
A P+ P P PP P P P P++ S S + P P P A S
Sbjct: 2379 AQPPLTPRPQPPPPESCCALPPRSLPSDPFSRVPASPQSQSSSQSPLTPRPLSAEAFCPS 2438
Query: 69 P-PPRARRTEP-AVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGTVAAAAGLGAR 126
P PR + +P + PPS L R Q + +LA T A G A
Sbjct: 2439 PVTPRFQSPDPYSRPPSRPQSRDPFAPLHKP-PRPQPPEVAFKAGSLAHTSLGAGGFPA- 2496
Query: 127 RARRLHLRGQIGVRRVAGTPE--ARGRGDGCSLGRVSPDR------------TPGKGSKG 172
A G++ + +G P R G G +G SP R P G
Sbjct: 2497 -ALPAGPAGELHAKVPSGQPPNFVRSPGTGAFVGTPSPMRFTFPQAVGEPSLKPPVPQPG 2555
Query: 173 MEPPH 177
+ PPH
Sbjct: 2556 LPPPH 2560
Score = 33.5 bits (75), Expect = 0.100
Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 12/75 (16%)
Query: 13 PILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPS-HAS----TSSR 67
P+LPPP + P +P P P SP A SP P LP + H S S
Sbjct: 439 PLLPPPEESPLSP----PPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPL 494
Query: 68 SPPPRARRTEPAVPP 82
SPPP P PP
Sbjct: 495 SPPP---EESPLSPP 506
Score = 33.5 bits (75), Expect = 0.100
Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 14/73 (19%)
Query: 9 AAPSPILPPPPDLPPTPTRRA----PLIGCPPSPARPAPSASPSPSRAAGPFLPPSHAST 64
+AP P P PP P P+ + PL+ P P P SP P +S
Sbjct: 4907 SAPPPEEPSPPPSPLAPSPASPPTEPLVELPTEPLAEPPVPSPLPLA----------SSP 4956
Query: 65 SSRSPPPRARRTE 77
S P PRAR E
Sbjct: 4957 ESARPKPRARPPE 4969
Score = 32.7 bits (73), Expect = 0.17
Identities = 33/113 (29%), Positives = 43/113 (38%), Gaps = 31/113 (27%)
Query: 13 PILPPPPDLPPTPTRRAPLIG--CPPSPARPAPSASPSPSRAAGPFLPP----------- 59
P+ P P +LP +P+ L PP P P SP + AA P L P
Sbjct: 907 PLSPLPEELPLSPSGEPSLSPQLMPPDPL--PPPLSPIITAAAPPALSPLGELEYPFGAK 964
Query: 60 ----------SHASTSSRSPPPRARRTEP------AVPPSCGSGPGAAGALRM 96
+ + SPPP A T+P +PPS GS G A + M
Sbjct: 965 GDSDPESPLAAPILETPISPPPEANCTDPEPVPPMILPPSPGSPVGPASPILM 1017
Score = 29.3 bits (64), Expect = 1.9
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 3/89 (3%)
Query: 4 ASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHAS 63
A + +A + PP +P + + PP PS P A P L P +
Sbjct: 2133 AGLSTSADGFLKPPAGSVPGPDSPGELFLKLPPQVPAQVPSQDPFGLAPAYP-LEPRFPT 2191
Query: 64 TSSRSPPPRARRTEPAVPPSCG--SGPGA 90
PP + PA PP G S PGA
Sbjct: 2192 APPTYPPYPSPTGAPAQPPMLGASSRPGA 2220
Score = 29.3 bits (64), Expect = 1.9
Identities = 30/118 (25%), Positives = 42/118 (35%), Gaps = 20/118 (16%)
Query: 2 AGASAARAAPSPI-LPPPPDLPPTPTRRAPLIGCPPSPARPA-----PSASPSPSRAAGP 55
AG+ +P + L PP +P + P P P P P+ P PS P
Sbjct: 2147 AGSVPGPDSPGELFLKLPPQVPAQVPSQDPFGLAPAYPLEPRFPTAPPTYPPYPSPTGAP 2206
Query: 56 FLPPSHASTSS---------RSPPPRARRTEPAVP-----PSCGSGPGAAGALRMGLG 99
PP ++S + PP R +P+ P P C S A G+G
Sbjct: 2207 AQPPMLGASSRPGAGQPGEFHTTPPGTPRHQPSTPDPFLKPRCPSLDNLAVPESPGVG 2264
Score = 28.5 bits (62), Expect = 3.2
Identities = 24/86 (27%), Positives = 31/86 (36%), Gaps = 12/86 (13%)
Query: 32 IGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSP-----------PPRARRTEPAV 80
+G P P P +P + + GP L P H + SP P TE +
Sbjct: 4277 LGAGPRPQGPPRLPAPPGALSTGPVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQL 4336
Query: 81 PPSCGSGPGAAG-ALRMGLGRTQRAA 105
PP+ P G L GR AA
Sbjct: 4337 PPTHPGTPKPQGPTLEPPPGRVSPAA 4362
Score = 27.7 bits (60), Expect = 5.5
Identities = 28/105 (26%), Positives = 37/105 (35%), Gaps = 20/105 (19%)
Query: 2 AGASAARAAPSPILPPPPDLP----------PTPTRRAPLI-------GCPPSPARP--A 42
A + P ILPP P P P P + +PL+ PPS P
Sbjct: 988 ANCTDPEPVPPMILPPSPGSPVGPASPILMEPLPPQCSPLLQHSLVPQNSPPSQCSPPAL 1047
Query: 43 PSASPSPSRAAGPFLPPSHASTSSRSPPPRARRTE-PAVPPSCGS 86
P + PSP G + S + + E PA+ PS S
Sbjct: 1048 PLSVPSPLSPIGKVVGVSDEAELHEMETEKVSEPECPALEPSATS 1092
>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
sapiens]
Length = 355
Score = 48.5 bits (114), Expect = 3e-06
Identities = 59/171 (34%), Positives = 66/171 (38%), Gaps = 17/171 (9%)
Query: 10 APSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSP 69
A SP LP P D P AP + P A SRA G + A +SSR P
Sbjct: 97 ASSPRLPLPADSEPDAYTSAP------RGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVP 150
Query: 70 PPRARRTEPAVPPSCGSGPG-AAGALRMGLGRTQRAARVAVSRALAGTVAAAAG---LGA 125
PR SCG GPG + A R GLG R+AR R T G GA
Sbjct: 151 RPRLPSQRRGA--SCGLGPGPESRAARQGLG--GRSARARTRRGPHRTRRPEPGPHHTGA 206
Query: 126 RRARRLHLRGQIGVRRVAGTPEARGRGDGCSLGRVSPDRTPGKGSKGMEPP 176
R+A L G G R AGT A RG L S G+ PP
Sbjct: 207 RQAG--PLPGTRGRTRAAGTGSA-ARGPARHLRGGSVAAAAAARCLGLSPP 254
Score = 38.9 bits (89), Expect = 0.002
Identities = 47/167 (28%), Positives = 61/167 (36%), Gaps = 22/167 (13%)
Query: 21 LPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSH---------ASTSSRSPPP 71
L PTP+ + C PSP A S P + + PFLP S +S SR P P
Sbjct: 21 LHPTPSEA---LSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSP 77
Query: 72 RARRTEPAVPPSCGSGPGAAGALRMGLGRTQR------AARVAVSRALAGTVAAAAGLGA 125
T P P G A + R+ L A R + AG + AG G
Sbjct: 78 AHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGL 137
Query: 126 RRARRLHLRGQIGVRRVAGTPEARGRGDGCSLGRVSPDRTPGKGSKG 172
+ H ++ R+ P R RG C LG R +G G
Sbjct: 138 TKYNSAHSSSRVPRPRL---PSQR-RGASCGLGPGPESRAARQGLGG 180
>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
sapiens]
Length = 355
Score = 48.5 bits (114), Expect = 3e-06
Identities = 59/171 (34%), Positives = 66/171 (38%), Gaps = 17/171 (9%)
Query: 10 APSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSP 69
A SP LP P D P AP + P A SRA G + A +SSR P
Sbjct: 97 ASSPRLPLPADSEPDAYTSAP------RGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVP 150
Query: 70 PPRARRTEPAVPPSCGSGPG-AAGALRMGLGRTQRAARVAVSRALAGTVAAAAG---LGA 125
PR SCG GPG + A R GLG R+AR R T G GA
Sbjct: 151 RPRLPSQRRGA--SCGLGPGPESRAARQGLG--GRSARARTRRGPHRTRRPEPGPHHTGA 206
Query: 126 RRARRLHLRGQIGVRRVAGTPEARGRGDGCSLGRVSPDRTPGKGSKGMEPP 176
R+A L G G R AGT A RG L S G+ PP
Sbjct: 207 RQAG--PLPGTRGRTRAAGTGSA-ARGPARHLRGGSVAAAAAARCLGLSPP 254
Score = 38.9 bits (89), Expect = 0.002
Identities = 47/167 (28%), Positives = 61/167 (36%), Gaps = 22/167 (13%)
Query: 21 LPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSH---------ASTSSRSPPP 71
L PTP+ + C PSP A S P + + PFLP S +S SR P P
Sbjct: 21 LHPTPSEA---LSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSP 77
Query: 72 RARRTEPAVPPSCGSGPGAAGALRMGLGRTQR------AARVAVSRALAGTVAAAAGLGA 125
T P P G A + R+ L A R + AG + AG G
Sbjct: 78 AHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGL 137
Query: 126 RRARRLHLRGQIGVRRVAGTPEARGRGDGCSLGRVSPDRTPGKGSKG 172
+ H ++ R+ P R RG C LG R +G G
Sbjct: 138 TKYNSAHSSSRVPRPRL---PSQR-RGASCGLGPGPESRAARQGLGG 180
>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
sapiens]
Length = 355
Score = 48.5 bits (114), Expect = 3e-06
Identities = 59/171 (34%), Positives = 66/171 (38%), Gaps = 17/171 (9%)
Query: 10 APSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSP 69
A SP LP P D P AP + P A SRA G + A +SSR P
Sbjct: 97 ASSPRLPLPADSEPDAYTSAP------RGSGPTYCAGAGNSRAGGGLTKYNSAHSSSRVP 150
Query: 70 PPRARRTEPAVPPSCGSGPG-AAGALRMGLGRTQRAARVAVSRALAGTVAAAAG---LGA 125
PR SCG GPG + A R GLG R+AR R T G GA
Sbjct: 151 RPRLPSQRRGA--SCGLGPGPESRAARQGLG--GRSARARTRRGPHRTRRPEPGPHHTGA 206
Query: 126 RRARRLHLRGQIGVRRVAGTPEARGRGDGCSLGRVSPDRTPGKGSKGMEPP 176
R+A L G G R AGT A RG L S G+ PP
Sbjct: 207 RQAG--PLPGTRGRTRAAGTGSA-ARGPARHLRGGSVAAAAAARCLGLSPP 254
Score = 38.9 bits (89), Expect = 0.002
Identities = 47/167 (28%), Positives = 61/167 (36%), Gaps = 22/167 (13%)
Query: 21 LPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSH---------ASTSSRSPPP 71
L PTP+ + C PSP A S P + + PFLP S +S SR P P
Sbjct: 21 LHPTPSEA---LSCWPSPPGEAYSLPELPFKKSKPFLPQSKQKADTETIGSSGGSRGPSP 77
Query: 72 RARRTEPAVPPSCGSGPGAAGALRMGLGRTQR------AARVAVSRALAGTVAAAAGLGA 125
T P P G A + R+ L A R + AG + AG G
Sbjct: 78 AHPWTTPQPGPPHQPGFNPASSPRLPLPADSEPDAYTSAPRGSGPTYCAGAGNSRAGGGL 137
Query: 126 RRARRLHLRGQIGVRRVAGTPEARGRGDGCSLGRVSPDRTPGKGSKG 172
+ H ++ R+ P R RG C LG R +G G
Sbjct: 138 TKYNSAHSSSRVPRPRL---PSQR-RGASCGLGPGPESRAARQGLGG 180
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 47.8 bits (112), Expect = 5e-06
Identities = 30/75 (40%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 13 PILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPS-RAAGPFLPPSHASTSSRSPP- 70
P PPPP +PP P P PP+P P P + +P+ P LPP+HA PP
Sbjct: 479 PPNPPPPPVPPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPPPPRLPPTHA-VPPHPPPG 537
Query: 71 ---PRARRTEPAVPP 82
P A PAVPP
Sbjct: 538 LGLPPASYPPPAVPP 552
Score = 40.4 bits (93), Expect = 8e-04
Identities = 27/73 (36%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 11 PSPILPPP-PDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSP 69
P P +PPP P PP P P PP P R P+ + P G LPP +S P
Sbjct: 495 PPPAIPPPTPGYPPPPPTYNP--NFPPPPPRLPPTHAVPPHPPPGLGLPP-----ASYPP 547
Query: 70 PPRARRTEPAVPP 82
P +P VPP
Sbjct: 548 PAVPPGGQPPVPP 560
Score = 39.7 bits (91), Expect = 0.001
Identities = 27/94 (28%), Positives = 34/94 (36%), Gaps = 10/94 (10%)
Query: 16 PPPPDLPPTPTRRAPLIGCPPSPARPAP-SASPSPSRAAGPF---------LPPSHASTS 65
PPPP +P T PL P P R P +A+ + GP +PP
Sbjct: 350 PPPPKIPKIETTHPPLPPAHPPPDRKPPLAAALGEAEPPGPVDATDLPKVQIPPPAHPAP 409
Query: 66 SRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLG 99
PPP R P P S +G + G G
Sbjct: 410 VHQPPPLPHRPPPPPPSSYMTGMSTTSSYMSGEG 443
Score = 26.9 bits (58), Expect = 9.4
Identities = 21/92 (22%), Positives = 30/92 (32%), Gaps = 24/92 (26%)
Query: 15 LPPPPDLPPTPT-----RRAPLIGCPPS-------------------PARPAPSASPSPS 50
L PP L PTP + P PS P +P+P S
Sbjct: 273 LQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQPKKPSPQPSSPRQ 332
Query: 51 RAAGPFLPPSHASTSSRSPPPRARRTEPAVPP 82
+ P + ++ PPP+ + E PP
Sbjct: 333 VKRAVVVSPKEENKAAEPPPPKIPKIETTHPP 364
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 47.0 bits (110), Expect = 9e-06
Identities = 35/110 (31%), Positives = 46/110 (41%), Gaps = 17/110 (15%)
Query: 2 AGASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSP--------------ARPAPSASP 47
A A+A+ P P PP P R +P G P +P +RP ++ P
Sbjct: 766 APAAASPGPPPPASPPGAPASPRAPRTSPYGGLPAAPLAGPALPARRLSRASRPLSASQP 825
Query: 48 S-PSRAAGPFLP--PSHASTSSRSPPPRARRTEPAVPPSCGSGPGAAGAL 94
S P A GP P+ +ST P P AR P+ + PGAAG L
Sbjct: 826 SLPHGAPGPAASTRPASSSTPRLGPTPAARAAAPSPDRRDSASPGAAGGL 875
Score = 46.2 bits (108), Expect = 1e-05
Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 23/142 (16%)
Query: 3 GASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARP--APSASPSPSRAAGPFLPPS 60
G + A A+P P PPP PP G P SP P +P + AGP LP
Sbjct: 764 GPAPAAASPGP---PPPASPP---------GAPASPRAPRTSPYGGLPAAPLAGPALPAR 811
Query: 61 HASTSSRSPPPRARRTEPAVP-----PSCGSGPGAAGALRMGLGRTQRAARVAVSRALAG 115
S +SR ++P++P P+ + P ++ R+G RAA + R +
Sbjct: 812 RLSRASRP----LSASQPSLPHGAPGPAASTRPASSSTPRLGPTPAARAAAPSPDRRDSA 867
Query: 116 TVAAAAGLGARRARRLHLRGQI 137
+ AA GL + + R L +
Sbjct: 868 SPGAAGGLDPQDSARSRLSSNL 889
Score = 43.1 bits (100), Expect = 1e-04
Identities = 34/102 (33%), Positives = 38/102 (37%), Gaps = 20/102 (19%)
Query: 7 ARAAPSPILPPPP----DLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLP---- 58
A AP P PPPP PP P AP G P+P + P A P AA P
Sbjct: 16 ATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEGGPRGRL 75
Query: 59 ------------PSHASTSSRSPPPRARRTEPAVPPSCGSGP 88
P AST+ SP R EP P+ GP
Sbjct: 76 RSRDSSCGRPGTPGAASTAKGSPNGECGRGEPQCSPAGPEGP 117
Score = 41.6 bits (96), Expect = 4e-04
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 9 AAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRS 68
A P+P PPPP PP P ++ P PP+P P P +P LPP A
Sbjct: 16 ATPAPGPPPPP--PPAPPQQQPPPPPPPAPP-PGPGPAPPQHPPRAEALPPEAADEGGPR 72
Query: 69 PPPRARRTEPAVPPSCGSGPGAAGALRMGLGR 100
R+R + P + G+ A G+ GR
Sbjct: 73 GRLRSRDSSCGRPGTPGAASTAKGSPNGECGR 104
Score = 40.8 bits (94), Expect = 6e-04
Identities = 31/95 (32%), Positives = 35/95 (36%), Gaps = 22/95 (23%)
Query: 2 AGASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPF-LPPS 60
A R SP P P PP P PP+P + P P P+ GP PP
Sbjct: 3 ARGGGGRPGESPGATPAPGPPPPP---------PPAPPQQQPPPPPPPAPPPGPGPAPPQ 53
Query: 61 HASTSSRSPPPRARRTEPAVPPSCGSGPGAAGALR 95
H PPRA A+PP G G LR
Sbjct: 54 H--------PPRAE----ALPPEAADEGGPRGRLR 76
Score = 34.7 bits (78), Expect = 0.045
Identities = 42/166 (25%), Positives = 60/166 (36%), Gaps = 23/166 (13%)
Query: 17 PPPDLPPTPT------RRAPLIGCPPSPARP--APSASPSPSRAAGPFLPPSHASTSSRS 68
PPP PP T ++A + P ARP P A SP P P+ A+ S
Sbjct: 715 PPPPPPPQVTSAIATLQQAAAMSFCPQVARPLVGPLALGSPRLVRRPPPGPAPAAASPGP 774
Query: 69 PPP----------RARRTEP--AVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGT 116
PPP RA RT P +P + +GP R A++ ++ G
Sbjct: 775 PPPASPPGAPASPRAPRTSPYGGLPAAPLAGPALPARRLSRASRPLSASQPSLPHGAPGP 834
Query: 117 VAAAAGLGARRARRLHLRGQIGVRRVAGTPEARGRGDGCSLGRVSP 162
A+ + R L R A +P+ R + G + P
Sbjct: 835 AASTRPASSSTPR---LGPTPAARAAAPSPDRRDSASPGAAGGLDP 877
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 47.0 bits (110), Expect = 9e-06
Identities = 53/179 (29%), Positives = 73/179 (40%), Gaps = 17/179 (9%)
Query: 4 ASAARAAPSPILPPPPDLPPTPTRR---APL----IGCPPSPARPAPSASPSPSRAAGPF 56
A A+ P P+L P P P P AP+ + P+PA PAP+ +P+P A P
Sbjct: 132 APASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPA-PAPAPAPAPVAAPAPA 190
Query: 57 LPPSHASTSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGT 116
P+ A + +P P A E A G+ G G + Q + ++ R AGT
Sbjct: 191 PAPAPAPAPAPAPAPDAAPQESA---EQGANQGQRGQEPLA---DQLHSGIS-GRPAAGT 243
Query: 117 VAAAAGLGARRARRLHLRGQIGVRRVAGTPEARGRGDGCSLGRVSPDRTPGKGSKGMEP 175
AA+A A + L +R PE + GD SP PG GS P
Sbjct: 244 AAASANGAAIKKLSGPLISDFFAKRKRSAPE-KSSGD-VPAPCPSPSAAPGVGSVEQTP 300
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 47.0 bits (110), Expect = 9e-06
Identities = 53/179 (29%), Positives = 73/179 (40%), Gaps = 17/179 (9%)
Query: 4 ASAARAAPSPILPPPPDLPPTPTRR---APL----IGCPPSPARPAPSASPSPSRAAGPF 56
A A+ P P+L P P P P AP+ + P+PA PAP+ +P+P A P
Sbjct: 132 APASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPA-PAPAPAPAPVAAPAPA 190
Query: 57 LPPSHASTSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGT 116
P+ A + +P P A E A G+ G G + Q + ++ R AGT
Sbjct: 191 PAPAPAPAPAPAPAPDAAPQESA---EQGANQGQRGQEPLA---DQLHSGIS-GRPAAGT 243
Query: 117 VAAAAGLGARRARRLHLRGQIGVRRVAGTPEARGRGDGCSLGRVSPDRTPGKGSKGMEP 175
AA+A A + L +R PE + GD SP PG GS P
Sbjct: 244 AAASANGAAIKKLSGPLISDFFAKRKRSAPE-KSSGD-VPAPCPSPSAAPGVGSVEQTP 300
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 47.0 bits (110), Expect = 9e-06
Identities = 53/179 (29%), Positives = 73/179 (40%), Gaps = 17/179 (9%)
Query: 4 ASAARAAPSPILPPPPDLPPTPTRR---APL----IGCPPSPARPAPSASPSPSRAAGPF 56
A A+ P P+L P P P P AP+ + P+PA PAP+ +P+P A P
Sbjct: 143 APASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPA-PAPAPAPAPVAAPAPA 201
Query: 57 LPPSHASTSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGT 116
P+ A + +P P A E A G+ G G + Q + ++ R AGT
Sbjct: 202 PAPAPAPAPAPAPAPDAAPQESA---EQGANQGQRGQEPLA---DQLHSGIS-GRPAAGT 254
Query: 117 VAAAAGLGARRARRLHLRGQIGVRRVAGTPEARGRGDGCSLGRVSPDRTPGKGSKGMEP 175
AA+A A + L +R PE + GD SP PG GS P
Sbjct: 255 AAASANGAAIKKLSGPLISDFFAKRKRSAPE-KSSGD-VPAPCPSPSAAPGVGSVEQTP 311
>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
member 1 interacting protein [Homo sapiens]
Length = 666
Score = 47.0 bits (110), Expect = 9e-06
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 11 PSPILPPPPD-LPPTPTRRAPLIGC---PPSPARPAPSASPSPSRAAGPFLPPSHASTSS 66
P + PPPD +PP P A + G PP P PAP+ +P P A P + +
Sbjct: 572 PPDFMEPPPDFVPPPPPSYAGIAGSELPPPPPPPPAPAPAPVPDSARPP------PAVAK 625
Query: 67 RSPPPRARRTEPAVPPSCGSG 87
R P P R+ P P G G
Sbjct: 626 RPPVPPKRQENPGHPGGAGGG 646
Score = 41.6 bits (96), Expect = 4e-04
Identities = 35/105 (33%), Positives = 40/105 (38%), Gaps = 20/105 (19%)
Query: 3 GASAARAAPSPILPPPP-----DLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFL 57
G A P LPPPP D P P + PP P P PS + AG L
Sbjct: 542 GGGGLPAPPDDFLPPPPPPPPLDDPELPPPPPDFMEPPPDFVPPPP---PSYAGIAGSEL 598
Query: 58 P----------PSHASTSSRSPPPRARRTEPAVPPSCGSGPGAAG 92
P P+ S+R PP A+R P VPP PG G
Sbjct: 599 PPPPPPPPAPAPAPVPDSARPPPAVAKR--PPVPPKRQENPGHPG 641
>gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens]
Length = 1159
Score = 47.0 bits (110), Expect = 9e-06
Identities = 40/126 (31%), Positives = 48/126 (38%), Gaps = 28/126 (22%)
Query: 23 PTPTRRAPLIGCPPSPARP----------------APSASPSPSRAAG-------PFLPP 59
P PT RAP G PP P P A SP P R P PP
Sbjct: 13 PGPTARAPSPGAPPPPRSPRSRPLLLLLLLLGACGAAGRSPEPGRLGPHAQLTRVPRSPP 72
Query: 60 SHASTSSRSPPPRARRTEPAVP---PSCGSGPGAAGALRMGLGRTQRAARVA--VSRALA 114
+ + +AR TEP P P GPG GA G R +RAA +A SRA
Sbjct: 73 AGRAEPGGGEDRQARGTEPGAPGPSPGPAPGPGEDGAPAAGYRRWERAAPLAGVASRAQV 132
Query: 115 GTVAAA 120
++ +
Sbjct: 133 SLISTS 138
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor
[Homo sapiens]
Length = 1336
Score = 47.0 bits (110), Expect = 9e-06
Identities = 43/128 (33%), Positives = 51/128 (39%), Gaps = 33/128 (25%)
Query: 1 MAGASAARAAPSPILPPPPDL-PPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPP 59
M +A AAP P PPPP PSPA PAP +P P+ PF+P
Sbjct: 893 MYSCCSAEAAPPPAKPPPPPQP-------------LPSPAYPAPRPAPGPA----PFVPR 935
Query: 60 SHASTSSRSPPPRARRTEPAVPPSCGS---------GPGAAGALRMGLGRTQRAARVAVS 110
AS R RRT+ A PP GP L +GLG + A R A
Sbjct: 936 ERASVD------RWRRTKGAGPPGGAGLADGFHRYYGPIEPQGLGLGLGEARAAPRGAAG 989
Query: 111 RALAGTVA 118
R L+ A
Sbjct: 990 RPLSPPAA 997
Score = 40.4 bits (93), Expect = 8e-04
Identities = 37/109 (33%), Positives = 44/109 (40%), Gaps = 23/109 (21%)
Query: 3 GASAARAAPS-----PILPP---PPDLPPTP---------TRRAPLIGCPPSPARPAPSA 45
G ARAAP P+ PP PP PP P P P+ PAP A
Sbjct: 976 GLGEARAAPRGAAGRPLSPPAAQPPQKPPPSYFAIVRDKEPAEPPAGAFPGFPSPPAPPA 1035
Query: 46 SPSPSRAAGPFLPPSHASTSSRSPPPRAR--RTEPAVPPSCGSGPGAAG 92
+ + A GP P + SPP AR R++P P G G G AG
Sbjct: 1036 AAAT--AVGP--PLCRLAFEDESPPAPARWPRSDPESQPLLGPGAGGAG 1080
Score = 31.6 bits (70), Expect = 0.38
Identities = 45/137 (32%), Positives = 56/137 (40%), Gaps = 34/137 (24%)
Query: 16 PPPPDLPPTPTRRAPLIGCPPS-PARPAPS----ASPSP-----SRAAGPF-LPPSHAST 64
PPP P P RRA GCP S P RP S A+ +P RAAG + LPP
Sbjct: 1211 PPPWAAGPLPRRRARC-GCPRSHPHRPRASHRTPAAAAPHHHRHRRAAGGWDLPP----- 1264
Query: 65 SSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGTVAAAAGLG 124
P P +R E S P AA A R+ G ++ A R + + A
Sbjct: 1265 ----PAPTSRSLE-----DLSSCPRAAPARRL-TGPSRHARRCPHAAHWGPPLPTA---- 1310
Query: 125 ARRARRLHLRGQIGVRR 141
+ R H G +G RR
Sbjct: 1311 ---SHRRHRGGDLGTRR 1324
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 47.0 bits (110), Expect = 9e-06
Identities = 33/83 (39%), Positives = 38/83 (45%), Gaps = 15/83 (18%)
Query: 5 SAARAAPSPI-----LPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPP 59
+AA AAPS + LPPPP PP P P PP P P P P P P PP
Sbjct: 666 AAAVAAPSVLAPTLPLPPPPGFPPLPPPPPPP---PPQPGFPMPPPLPPPP----PPPPP 718
Query: 60 SHASTSSRSPPPRARRTEPAVPP 82
+H + + PP A P VPP
Sbjct: 719 AHPAVTVPPPPLPA---PPGVPP 738
Score = 36.6 bits (83), Expect = 0.012
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 13 PILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPP 59
P+ PP P PP P P + PP P PAP P P P LPP
Sbjct: 704 PMPPPLPPPPPPPPPAHPAVTVPPPPL-PAPPGVPPP-----PILPP 744
Score = 33.9 bits (76), Expect = 0.077
Identities = 26/74 (35%), Positives = 29/74 (39%), Gaps = 18/74 (24%)
Query: 13 PILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSPPPR 72
P++ P P PP P PP P RP PS P P + AS S P P
Sbjct: 1271 PMMLPLPLQPPLP---------PPRPPRP-PSPPPEPE--------TTDASHPSVPPEPL 1312
Query: 73 ARRTEPAVPPSCGS 86
A P P CGS
Sbjct: 1313 AEDHPPHTPGLCGS 1326
Score = 32.7 bits (73), Expect = 0.17
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 1 MAGASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPS 60
++G S+ + SP +P P P P+ G P +P R S +P+ S +GP L P
Sbjct: 1346 LSGGSSGLSLSSPQVPGSPFSYPAPSPSLSSGGLPRTPGRDF-SFTPTFSEPSGPLLLPV 1404
Query: 61 HASTSSRSPPPRARRTEPAVP 81
P P RR E + P
Sbjct: 1405 -------CPLPTGRRDERSGP 1418
Score = 32.3 bits (72), Expect = 0.22
Identities = 24/82 (29%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Query: 11 PSP-ILPPPPDLPPTPTRRAPLIGCPPSPARP--APSASPSPSRAAGPFLPPSHASTSSR 67
P P ++ P P+ AP + PP P P P P P + P PP
Sbjct: 657 PKPMVVTPGAAAVAAPSVLAPTLPLPPPPGFPPLPPPPPPPPPQPGFPMPPP---LPPPP 713
Query: 68 SPPPRARRTEPAVPPSCGSGPG 89
PPP A PP + PG
Sbjct: 714 PPPPPAHPAVTVPPPPLPAPPG 735
Score = 31.6 bits (70), Expect = 0.38
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 13/96 (13%)
Query: 16 PPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSPPP---- 71
P PP + P P + P + P P P+P P + A+ P +PP + P
Sbjct: 1268 PEPPMMLPLPLQ--PPLPPPRPPRPPSPPPEPETTDASHPSVPPEPLAEDHPPHTPGLCG 1325
Query: 72 -----RARRTEPAVPPSCGSGPGAAGALRMGLGRTQ 102
++ T PA P G P + G+ + L Q
Sbjct: 1326 SLAKSQSTETVPATPG--GEPPLSGGSSGLSLSSPQ 1359
Score = 30.8 bits (68), Expect = 0.65
Identities = 28/91 (30%), Positives = 31/91 (34%), Gaps = 7/91 (7%)
Query: 11 PSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSPP 70
P P+ P P P R P P PAP AS P P P RSPP
Sbjct: 1432 PLPLPLPLPLALPAVLRAQARAPTPLPPLLPAPLASCPPPMKRKPGRP-------RRSPP 1484
Query: 71 PRARRTEPAVPPSCGSGPGAAGALRMGLGRT 101
P V P G+ G L G +T
Sbjct: 1485 SMLSLDGPLVRPPAGAALGRELLLLPGQPQT 1515
Score = 29.3 bits (64), Expect = 1.9
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 15/88 (17%)
Query: 5 SAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGP--------- 55
+A AP P LPP P PP P P + P + + PS + GP
Sbjct: 1533 NAGIPAPPPPLPPQPPPPPPP----PPVEPTKLPFKELDNQWPSEAIPPGPRGRDEVTEE 1588
Query: 56 FLPPSHASTSSRSPPPRARRTEPAVPPS 83
++ + + R PP +R E VPP+
Sbjct: 1589 YMELAKSRGPWRRPP--KKRHEDLVPPA 1614
Score = 28.5 bits (62), Expect = 3.2
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Query: 12 SPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSR 67
+P PPPPD P G P P +P S AGP P H S SR
Sbjct: 450 TPPGPPPPDTNSMELGGRPTFGWSPEPC-DSPGTPTLESSPAGPEKP--HDSLDSR 502
Score = 27.3 bits (59), Expect = 7.2
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 9/64 (14%)
Query: 16 PPPPDLPPTPTRRAPLIGCPPSPARP---------APSASPSPSRAAGPFLPPSHASTSS 66
P PP LPP G PP P P P+ SP P P +S +
Sbjct: 432 PAPPPLPPAEPLAKEKPGTPPGPPPPDTNSMELGGRPTFGWSPEPCDSPGTPTLESSPAG 491
Query: 67 RSPP 70
P
Sbjct: 492 PEKP 495
Score = 27.3 bits (59), Expect = 7.2
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 4 ASAARAAPSPILPPPPDLPPTPTRRAPLIGCPP 36
A A P P LP PP +PP P PL PP
Sbjct: 719 AHPAVTVPPPPLPAPPGVPPPPI-LPPLPPFPP 750
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 46.6 bits (109), Expect = 1e-05
Identities = 33/96 (34%), Positives = 34/96 (35%), Gaps = 9/96 (9%)
Query: 11 PSPILPPPPDLP-------PTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHAS 63
P +PPPP LP P P G P P P P P PS A P PP
Sbjct: 648 PPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPP--PPPPPP 705
Query: 64 TSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLG 99
SP P P PP G P L GLG
Sbjct: 706 PLPNSPAPPNPGGPPPAPPPPGLAPPPPPGLFFGLG 741
Score = 44.7 bits (104), Expect = 4e-05
Identities = 30/87 (34%), Positives = 34/87 (39%), Gaps = 14/87 (16%)
Query: 13 PILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSPPPR 72
P LPPPP PP P G PP P P SP+P GP PP+ PPP
Sbjct: 678 PPLPPPPP-PPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGP--PPAPPPPGLAPPPPP 734
Query: 73 AR-----------RTEPAVPPSCGSGP 88
+PA+ PSC P
Sbjct: 735 GLFFGLGSSSSQCPRKPAIEPSCPMKP 761
>gi|210031233 PR domain containing 6 [Homo sapiens]
Length = 595
Score = 46.6 bits (109), Expect = 1e-05
Identities = 47/161 (29%), Positives = 61/161 (37%), Gaps = 34/161 (21%)
Query: 2 AGASAARAAPSPILPPPPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSH 61
+GA+ +AP P+ PPPP PP P R P PP RP P
Sbjct: 38 SGAAGLLSAPQPLQPPPP--PPPPERAEP----PPDSLRPRP------------------ 73
Query: 62 ASTSSRSPPPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGTVAAAA 121
AS SS S P + T + SC + AA A GL +++ V LA AA
Sbjct: 74 ASLSSASSTPASSSTSASSASSCAA--AAAAAALAGLSALP-VSQLPVFAPLAAAAVAAE 130
Query: 122 GLGARRARRLHLRGQIGVRRVAGTPEARGRGDGCSLGRVSP 162
L + +G G + G G G GR +P
Sbjct: 131 PLPPKEL-------CLGATSGPGPVKCGGGGGGGGEGRGAP 164
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,709,082
Number of Sequences: 37866
Number of extensions: 781949
Number of successful extensions: 22602
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 1804
Number of HSP's that attempted gapping in prelim test: 7409
Number of HSP's gapped (non-prelim): 10499
length of query: 179
length of database: 18,247,518
effective HSP length: 96
effective length of query: 83
effective length of database: 14,612,382
effective search space: 1212827706
effective search space used: 1212827706
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.