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Search of human proteins with 239741525
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741525 PREDICTED: hypothetical protein [Homo sapiens]
(372 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239741525 PREDICTED: hypothetical protein [Homo sapiens] 739 0.0
gi|239753091 PREDICTED: hypothetical protein [Homo sapiens] 727 0.0
gi|169162091 PREDICTED: similar to Kinesin-Like Protein family m... 716 0.0
gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapi... 35 0.14
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 33 0.41
gi|155722987 elongation factor, RNA polymerase II, 2 [Homo sapiens] 33 0.41
gi|33356148 formin-like 1 [Homo sapiens] 33 0.54
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr... 32 0.70
gi|59850762 uveal autoantigen with coiled-coil domains and ankyr... 32 0.70
gi|156938343 talin 2 [Homo sapiens] 32 0.70
gi|4507691 transformation/transcription domain-associated protei... 32 0.92
gi|148727368 bromodomain and PHD finger containing, 3 [Homo sapi... 32 0.92
gi|157743261 tripartite motif-containing 75 [Homo sapiens] 32 0.92
gi|116284392 mucin 2 precursor [Homo sapiens] 32 1.2
gi|167001141 glypican 1 precursor [Homo sapiens] 32 1.2
gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 32 1.2
gi|22095331 hypothetical protein LOC23065 [Homo sapiens] 32 1.2
gi|238624257 insulin-like growth factor 2 mRNA binding protein 1... 31 1.6
gi|239757419 PREDICTED: hypothetical protein [Homo sapiens] 31 1.6
gi|239753102 PREDICTED: hypothetical protein [Homo sapiens] 31 1.6
gi|56237027 insulin-like growth factor 2 mRNA binding protein 1 ... 31 1.6
gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens] 31 1.6
gi|78000163 sorbin and SH3 domain containing 1 isoform 3 [Homo s... 31 2.0
gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens] 31 2.0
gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens] 31 2.0
gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens] 31 2.0
gi|38045908 laminin alpha 3 subunit isoform 2 [Homo sapiens] 31 2.0
gi|167234405 hypothetical protein LOC284325 [Homo sapiens] 31 2.0
gi|241982780 programmed cell death 6 interacting protein isoform... 30 2.7
gi|22027538 programmed cell death 6 interacting protein isoform ... 30 2.7
>gi|239741525 PREDICTED: hypothetical protein [Homo sapiens]
Length = 372
Score = 739 bits (1908), Expect = 0.0
Identities = 372/372 (100%), Positives = 372/372 (100%)
Query: 1 MLTSSVCRTHGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLP 60
MLTSSVCRTHGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLP
Sbjct: 1 MLTSSVCRTHGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLP 60
Query: 61 NTIYTKPVWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLG 120
NTIYTKPVWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLG
Sbjct: 61 NTIYTKPVWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLG 120
Query: 121 LMVTGEGHILVDTKKISTVKDISQAASNQIPELYLKLLKLEQETEPLRNINRALREENVL 180
LMVTGEGHILVDTKKISTVKDISQAASNQIPELYLKLLKLEQETEPLRNINRALREENVL
Sbjct: 121 LMVTGEGHILVDTKKISTVKDISQAASNQIPELYLKLLKLEQETEPLRNINRALREENVL 180
Query: 181 LKASLAKTASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSM 240
LKASLAKTASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSM
Sbjct: 181 LKASLAKTASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSM 240
Query: 241 NTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLLLSAVPSPPSRHTTCS 300
NTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLLLSAVPSPPSRHTTCS
Sbjct: 241 NTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLLLSAVPSPPSRHTTCS 300
Query: 301 LPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFIHQRSQMFKDLGDLRE 360
LPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFIHQRSQMFKDLGDLRE
Sbjct: 301 LPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFIHQRSQMFKDLGDLRE 360
Query: 361 SSLWTLKMTLLL 372
SSLWTLKMTLLL
Sbjct: 361 SSLWTLKMTLLL 372
>gi|239753091 PREDICTED: hypothetical protein [Homo sapiens]
Length = 383
Score = 727 bits (1877), Expect = 0.0
Identities = 370/383 (96%), Positives = 371/383 (96%), Gaps = 11/383 (2%)
Query: 1 MLTSSVCRTHGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLP 60
MLTSSVCRTHGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLP
Sbjct: 1 MLTSSVCRTHGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLP 60
Query: 61 NTIYTKPVWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLG 120
NTIYTKPVWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLG
Sbjct: 61 NTIYTKPVWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLG 120
Query: 121 LMVTGEGHILVDTKKISTVKDISQAASNQIPELYLKLLKLEQETEPLRNINRALREENVL 180
LMVTGEGHILVDTKKISTVKDISQAASNQIPELYLKLL+LEQETEPLRNINRALREENVL
Sbjct: 121 LMVTGEGHILVDTKKISTVKDISQAASNQIPELYLKLLRLEQETEPLRNINRALREENVL 180
Query: 181 LKASLAKTASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSM 240
LKASLAK ASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSM
Sbjct: 181 LKASLAKIASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSM 240
Query: 241 NTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLL-----------LSAV 289
NTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLL LSAV
Sbjct: 241 NTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLLCERESAALSGRLSAV 300
Query: 290 PSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFIHQRS 349
PSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFIHQRS
Sbjct: 301 PSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFIHQRS 360
Query: 350 QMFKDLGDLRESSLWTLKMTLLL 372
QMFKDLGDLRESSLWTLKMTLLL
Sbjct: 361 QMFKDLGDLRESSLWTLKMTLLL 383
>gi|169162091 PREDICTED: similar to Kinesin-Like Protein family
member (klp-6) [Homo sapiens]
Length = 609
Score = 716 bits (1847), Expect = 0.0
Identities = 364/376 (96%), Positives = 365/376 (97%), Gaps = 11/376 (2%)
Query: 8 RTHGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLPNTIYTKP 67
+THGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLPNTIYTKP
Sbjct: 234 QTHGEEDVVIDPLELLGKRMDFQIHIVRCLGVNWMKEDAKRGTQIGYRIYDLPNTIYTKP 293
Query: 68 VWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLGLMVTGEG 127
VWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLGLMVTGEG
Sbjct: 294 VWKSVNPQIEETVQFAALTASQEFLNYLRTNALIVDLWGLQEGCTELSCSQLGLMVTGEG 353
Query: 128 HILVDTKKISTVKDISQAASNQIPELYLKLLKLEQETEPLRNINRALREENVLLKASLAK 187
HILVDTKKISTVKDISQAASNQIPELYLKLLKLEQETEPLRNINRALREENVLLKASLAK
Sbjct: 354 HILVDTKKISTVKDISQAASNQIPELYLKLLKLEQETEPLRNINRALREENVLLKASLAK 413
Query: 188 TASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSMNTARGQL 247
TASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSMNTARGQL
Sbjct: 414 TASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSMNTARGQL 473
Query: 248 FRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLL-----------LSAVPSPPSRH 296
FRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLL LSAVPSPPSRH
Sbjct: 474 FRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLLCERESAALSGRLSAVPSPPSRH 533
Query: 297 TTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFIHQRSQMFKDLG 356
TTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFIHQRSQMFKDLG
Sbjct: 534 TTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRPFIHQRSQMFKDLG 593
Query: 357 DLRESSLWTLKMTLLL 372
DLRESSLWTLKMTLLL
Sbjct: 594 DLRESSLWTLKMTLLL 609
>gi|239508790 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 490
Score = 34.7 bits (78), Expect = 0.14
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 285 LLSAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEV 337
LLS VPSPPS + P S VPSPP+ + L G+PS PP +V
Sbjct: 288 LLSGVPSPPSDVPSLLSDVPSPPSDVPSPPSDI--PLLSGVPS-----PPSDV 333
Score = 32.7 bits (73), Expect = 0.54
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 13/53 (24%)
Query: 285 LLSAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEV 337
LLS VPSPPS P S VPSPP+ V +L G+PS PP +V
Sbjct: 152 LLSGVPSPPS-------DVPSPPSDVPSPPSDVP-SLLSGVPS-----PPSDV 191
Score = 32.0 bits (71), Expect = 0.92
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 256 PTFDVTAFPELGDVYAEAEEQGEEALLDLLLSAVPSPPSRHTTCSLPFPFSASAVPSPPT 315
P DV + P DV + + + + LLS VPSPPS + S P S VPS P+
Sbjct: 227 PPSDVPSLPS--DVPSLSGVPSPPSDVPSLLSGVPSPPSDISPPS-DVPSLLSDVPSLPS 283
Query: 316 LVSRTLPQGIPSSQGYLPPQEVDQML 341
V +L G+PS PP +V +L
Sbjct: 284 DVP-SLLSGVPS-----PPSDVPSLL 303
Score = 31.2 bits (69), Expect = 1.6
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 9/49 (18%)
Query: 285 LLSAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLP 333
LLS VPSPPS P S VPSPP+ V L G+PS +P
Sbjct: 322 LLSGVPSPPS-------DVPSPPSDVPSPPSDV--PLLSGVPSPLSDVP 361
Score = 30.8 bits (68), Expect = 2.0
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 19/76 (25%)
Query: 285 LLSAVPSPPS--RHTTCSLPFPFS----ASAVPSPPTLVS------------RTLPQGIP 326
LLS VPSPPS +P P S S VPSPP+ V +LP +P
Sbjct: 180 LLSGVPSPPSDVPSPPSDVPSPPSDVPLLSDVPSPPSDVPLLSDVPSPPSDVPSLPSDVP 239
Query: 327 SSQGY-LPPQEVDQML 341
S G PP +V +L
Sbjct: 240 SLSGVPSPPSDVPSLL 255
Score = 30.4 bits (67), Expect = 2.7
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 11/63 (17%)
Query: 281 LLDLLLSAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSR------TLPQGIPSSQGYLPP 334
L+ LLS VPSPPS + P S V SPP+ V +L G+PS PP
Sbjct: 106 LVSPLLSGVPSPPSDVPSLLSGVPSLPSDVSSPPSDVPSLLSDVPSLLSGVPS-----PP 160
Query: 335 QEV 337
+V
Sbjct: 161 SDV 163
Score = 30.4 bits (67), Expect = 2.7
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 287 SAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEV 337
S VPSPPS + P S VPSPP+ V + P +PS PP +V
Sbjct: 161 SDVPSPPSDVPSPPSDVPSLLSGVPSPPSDVP-SPPSDVPS-----PPSDV 205
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 33.1 bits (74), Expect = 0.41
Identities = 25/90 (27%), Positives = 33/90 (36%), Gaps = 24/90 (26%)
Query: 255 PPTFDVTAFPELGD----------VYAEAEEQGEEALLDLLLSAVPSPPSRHTTCSLPFP 304
PPT +A D VY++++ + +L L A PSP
Sbjct: 600 PPTLPTSATSLASDSTFDSGQGSTVYSDSQSSQQSVMLGSLADAAPSP------------ 647
Query: 305 FSASAVPSPPTLVSRTLPQGIPSSQGYLPP 334
A V SPP LPQ +PS Y P
Sbjct: 648 --AQCVCSPPVSEGPVLPQSLPSLGAYQQP 675
>gi|155722987 elongation factor, RNA polymerase II, 2 [Homo sapiens]
Length = 640
Score = 33.1 bits (74), Expect = 0.41
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 291 SPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIP 326
+P S + LP P +A+A+P+PP L S LP P
Sbjct: 353 NPTSEKSAAGLPLPPAAAAIPTPPPLPSTYLPISHP 388
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 32.7 bits (73), Expect = 0.54
Identities = 51/218 (23%), Positives = 77/218 (35%), Gaps = 26/218 (11%)
Query: 127 GHILVDTKKISTVKDISQAASNQIPELYLKLLKLEQET-----EPLRNINRALREENVLL 181
G +L DT+ + V + + Q+ L +L E E+ E + +++A +E L
Sbjct: 385 GALLEDTETKNAVLEHMEELQEQVALLTERLRDAENESMAKIAELEKQLSQARKELETLR 444
Query: 182 KASLAKTASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDREL-----AKALKVF 236
+ TA G + +P K PSA E+ ++ G R L A ++++
Sbjct: 445 ERFSESTAMGASRRPPEPEKAPPAAPTRPSALELKVEELEEKGLIRILRGPGDAVSIEIL 504
Query: 237 YQSMNTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLLLSAVPSPPSRH 296
++ T G PT V D+ AE A P PP
Sbjct: 505 PVAVATPSGG-------DAPTPGVPTGSPSPDLAPAAEPAP---------GAAPPPPPPL 548
Query: 297 TTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPP 334
P SA P P L P P G LPP
Sbjct: 549 PGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPP 586
>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 2 [Homo sapiens]
Length = 1403
Score = 32.3 bits (72), Expect = 0.70
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 140 KDISQAASNQIPELYLKLLKLEQETEPLRNINRALREENVLLKASLAKTASGQAPKPSNT 199
+++ + SN++ E KL+++E+E E + R L+ E +KA LA Q KP
Sbjct: 620 ENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLA-----QHVKPEEH 674
Query: 200 LKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSMNTARGQLFRL 250
++ Q +GE+ + T+ ++ L K ++ Y + Q L
Sbjct: 675 EQVKSRLEQ--KSGELGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNL 723
>gi|59850762 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 1 [Homo sapiens]
Length = 1416
Score = 32.3 bits (72), Expect = 0.70
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 140 KDISQAASNQIPELYLKLLKLEQETEPLRNINRALREENVLLKASLAKTASGQAPKPSNT 199
+++ + SN++ E KL+++E+E E + R L+ E +KA LA Q KP
Sbjct: 633 ENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLA-----QHVKPEEH 687
Query: 200 LKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSMNTARGQLFRL 250
++ Q +GE+ + T+ ++ L K ++ Y + Q L
Sbjct: 688 EQVKSRLEQ--KSGELGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNL 736
>gi|156938343 talin 2 [Homo sapiens]
Length = 2542
Score = 32.3 bits (72), Expect = 0.70
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Query: 161 EQETEPLRNINRALREENVLLKASLAKTASGQAPKPSNTLKISGMTAQLPSAGEMSQMCT 220
E + + + N+ + LL A+ + + AP N L + A S ++ +CT
Sbjct: 1298 EDQIQVIGNLKNISMASSKLLLAAKSLSVDPGAPNAKNLLAAAAR-AVTESINQLITLCT 1356
Query: 221 QQAGSDRELAKALKVFYQSMNTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQGE 278
QQA +E AL+ + T +G L P D++ F + V ++ GE
Sbjct: 1357 QQAPGQKECDNALR----ELETVKGM---LDNPNEPVSDLSYFDCIESVMENSKVLGE 1407
>gi|4507691 transformation/transcription domain-associated protein
[Homo sapiens]
Length = 3830
Score = 32.0 bits (71), Expect = 0.92
Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 6/99 (6%)
Query: 238 QSMNTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLLLSAVPSPPSRHT 297
Q R L R+ F A +L ++ + + Q E ++ L VP+ P+
Sbjct: 436 QESGNGRDVLMRMLEVFVLKFHTIARYQLSAIFKKCKPQSELGAVEAALPGVPTAPAAPG 495
Query: 298 TCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQE 336
P P A P PP P P + +PP E
Sbjct: 496 PAPSPAPVPAPPPPPPPP------PPATPVTPAPVPPFE 528
>gi|148727368 bromodomain and PHD finger containing, 3 [Homo
sapiens]
Length = 1205
Score = 32.0 bits (71), Expect = 0.92
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 231 KALKVFYQSMNTARGQLFRLRRHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLLL---- 286
+ +++ + +N R +L + QPP+ + T + + A QG+ A+L+ L
Sbjct: 766 RRVRLLRREINALRQKLAQPPPPQPPSLNKT----VSNGELPAGPQGDAAVLEQALQEEP 821
Query: 287 --------SAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVD 338
S +P PP+ T P + P PPTL + + P S+ +L P++V+
Sbjct: 822 EDDGDRDDSKLPPPPTLEPTGPAPSLSEQESPPEPPTL--KPINDSKPPSR-FLKPRKVE 878
Query: 339 Q 339
+
Sbjct: 879 E 879
>gi|157743261 tripartite motif-containing 75 [Homo sapiens]
Length = 468
Score = 32.0 bits (71), Expect = 0.92
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 134 KKISTVKDISQAASNQIPELYLKLLKLEQE-TEPLRNINRAL-REENVLLKASLAKTASG 191
K+++ ++ + S + EL + QE + ++N+ L RE+ +L +
Sbjct: 153 KQLADLQKLISTQSKKPLELREMVENQRQELSSEFEHLNQFLDREQQAVLSRLAEEEKDN 212
Query: 192 QAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDRELAKALKVFYQSMNTARGQLFRL 250
Q +N S +A L S ++S++ S+ EL +K+FY+S N + +F +
Sbjct: 213 QQKLSANITAFSNYSATLKS--QLSKVVELSELSELELLSQIKIFYESENESSPSIFSI 269
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 31.6 bits (70), Expect = 1.2
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 8/61 (13%)
Query: 287 SAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLP---QGIPSSQGYLPPQEVDQMLRP 343
+ PSPP TT + P P + PSPPT TLP P + LPP P
Sbjct: 1718 TTTPSPPP--TTMTTPSP---TTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPPTFSP 1772
Query: 344 F 344
F
Sbjct: 1773 F 1773
>gi|167001141 glypican 1 precursor [Homo sapiens]
Length = 558
Score = 31.6 bits (70), Expect = 1.2
Identities = 20/72 (27%), Positives = 34/72 (47%)
Query: 170 INRALREENVLLKASLAKTASGQAPKPSNTLKISGMTAQLPSAGEMSQMCTQQAGSDREL 229
+ ALR+ + +L+A LA + L S T Q G ++ TQ A + R+L
Sbjct: 85 LETALRDSSRVLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNARAFRDL 144
Query: 230 AKALKVFYQSMN 241
L+++Y+ N
Sbjct: 145 YSELRLYYRGAN 156
>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
Length = 2028
Score = 31.6 bits (70), Expect = 1.2
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 130 LVDTKKISTVKDISQAASNQIPELYLKLLKLEQETEPLRNINRALREENVLLKASLAKTA 189
L D + S V ++++ AS++I LKLE+E + L++ + LR+ +++L+ S K
Sbjct: 445 LSDASRKSFVFELNECASSRI-------LKLEKENQSLQSTIQGLRDASLVLEESGLKCG 497
Query: 190 SGQAPKPSNTLKISGMTAQLPSAGEMSQ 217
+ + KI + QL + +Q
Sbjct: 498 ELEKENHQLSKKIEKLQTQLEREKQSNQ 525
>gi|22095331 hypothetical protein LOC23065 [Homo sapiens]
Length = 993
Score = 31.6 bits (70), Expect = 1.2
Identities = 31/131 (23%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Query: 77 EETVQFAALTASQE-FLNYLRTNALIVDLWGLQEGCTELSCSQL-GLMVTG--------- 125
+++V + AL +++ L +L+ A V LW +E E+ C ++ L +TG
Sbjct: 414 DDSVGYRALVQTEDHLLLFLQQLAGKVVLWSREESLAEVVCLEMVDLPLTGAQAELEGEF 473
Query: 126 ----EGHILVDTKKISTVKDISQAASNQIPELYLKLLKLEQETEPLRNINRALREENVLL 181
+G + + K++S+ + QA ++ + +++ K + + NI+ R+E L
Sbjct: 474 GKKADGLLGMFLKRLSSQLILLQAWTSHLWKMFYDARKPRSQIKNEINIDTLARDEFNLQ 533
Query: 182 KASLAKTASGQ 192
K + TASG+
Sbjct: 534 KMMVMVTASGK 544
>gi|238624257 insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Homo sapiens]
Length = 438
Score = 31.2 bits (69), Expect = 1.6
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 303 FPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRP------FIHQRSQMFKDLG 356
FP S+SAVP PP+ V+ P SS P QE+ Q+ P I ++ Q K L
Sbjct: 237 FPASSSAVPPPPSSVTGAAPY---SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 293
Query: 357 DLRESSL 363
+S+
Sbjct: 294 RFASASI 300
>gi|239757419 PREDICTED: hypothetical protein [Homo sapiens]
Length = 164
Score = 31.2 bits (69), Expect = 1.6
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 260 VTAFPELGDVYAEAEEQGEEALLDLLLSAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSR 319
+ +FP LG + EEQ A DL A+P P H C P P + P P +
Sbjct: 1 MNSFPNLGQESGDGEEQ-LHATWDL---ALPRGPRHHGNCRQPAPTAGKRGPEPRYSLGL 56
Query: 320 TLPQG 324
QG
Sbjct: 57 RAAQG 61
>gi|239753102 PREDICTED: hypothetical protein [Homo sapiens]
Length = 252
Score = 31.2 bits (69), Expect = 1.6
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 252 RHQPPTFDVTAFPELGDVYAEAEEQGEEALLDLLLSAVPSPPSRHTTCSLPFPFSASAVP 311
R +P TF FP LGD A+ E G D P+P SLP P + + P
Sbjct: 86 RPRPQTFPRGVFPALGDA-AQGPEDGLARRKDTEAPTFPNPAPLLLPPSLPAPKARGSYP 144
Query: 312 SPPTLVSRTLPQGIPSSQG 330
S + P+ +P+ G
Sbjct: 145 S-------SGPRSLPNPAG 156
>gi|56237027 insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Homo sapiens]
Length = 577
Score = 31.2 bits (69), Expect = 1.6
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 303 FPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRP------FIHQRSQMFKDLG 356
FP S+SAVP PP+ V+ P SS P QE+ Q+ P I ++ Q K L
Sbjct: 376 FPASSSAVPPPPSSVTGAAPY---SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 357 DLRESSL 363
+S+
Sbjct: 433 RFASASI 439
>gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]
Length = 739
Score = 31.2 bits (69), Expect = 1.6
Identities = 32/83 (38%), Positives = 37/83 (44%), Gaps = 15/83 (18%)
Query: 269 VYAEAEEQGEEALLDLLLSAVPSPPSRHTTCSLPFPFSASAVP-----SP----PTLVSR 319
V A GEE +L L VP PP+ T P P A A P SP PT +S
Sbjct: 410 VAAPGPALGEE-VLGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSP 468
Query: 320 T-----LPQGIPSSQGYLPPQEV 337
T LPQ +P+SQ PQ V
Sbjct: 469 TSPLLNLPQVVPTSQVVTLPQAV 491
>gi|78000163 sorbin and SH3 domain containing 1 isoform 3 [Homo
sapiens]
Length = 1292
Score = 30.8 bits (68), Expect = 2.0
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 1/111 (0%)
Query: 211 SAGEMSQMCTQQAGSDRELAKALKVFYQSMNTARGQLFRLRRHQPPTFDVTAFPELGDVY 270
S ++S + + G + K +Y++M +L R + P F FPEL ++
Sbjct: 369 STQDLSDVSMDEVGIPLRNTERSKDWYKTMFKQIHKLNRDTPEENPYFPTYKFPELPEIQ 428
Query: 271 AEAEEQGEEALLDLLLSAVPSPPSRHTTCSLPFP-FSASAVPSPPTLVSRT 320
+EE ++ PSP S L P +S S P V R+
Sbjct: 429 QTSEEDNPYTPTYQFPASTPSPKSEDDDSDLYSPRYSFSEDTKSPLSVPRS 479
>gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens]
Length = 3333
Score = 30.8 bits (68), Expect = 2.0
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 132 DTKKISTVKDIS-QAASNQIPELYLKLLKLEQETEPLRNINRALREENVLLKASLAKTAS 190
D KK T D S +N++P+L+ K+ + Q+ PL NI+ + L++ A+ A+
Sbjct: 2327 DFKKALTDADNSVNKLTNKLPDLWRKIESINQQLLPLGNISDNMDRIRELIQQ--ARDAA 2384
Query: 191 GQAPKPSNTLKISGMTAQLPS 211
+ P SG+ +LP+
Sbjct: 2385 SKVAVPMRFNGKSGVEVRLPN 2405
>gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens]
Length = 1668
Score = 30.8 bits (68), Expect = 2.0
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 132 DTKKISTVKDIS-QAASNQIPELYLKLLKLEQETEPLRNINRALREENVLLKASLAKTAS 190
D KK T D S +N++P+L+ K+ + Q+ PL NI+ + L++ A+ A+
Sbjct: 662 DFKKALTDADNSVNKLTNKLPDLWRKIESINQQLLPLGNISDNMDRIRELIQQ--ARDAA 719
Query: 191 GQAPKPSNTLKISGMTAQLPS 211
+ P SG+ +LP+
Sbjct: 720 SKVAVPMRFNGKSGVEVRLPN 740
>gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens]
Length = 3277
Score = 30.8 bits (68), Expect = 2.0
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 132 DTKKISTVKDIS-QAASNQIPELYLKLLKLEQETEPLRNINRALREENVLLKASLAKTAS 190
D KK T D S +N++P+L+ K+ + Q+ PL NI+ + L++ A+ A+
Sbjct: 2271 DFKKALTDADNSVNKLTNKLPDLWRKIESINQQLLPLGNISDNMDRIRELIQQ--ARDAA 2328
Query: 191 GQAPKPSNTLKISGMTAQLPS 211
+ P SG+ +LP+
Sbjct: 2329 SKVAVPMRFNGKSGVEVRLPN 2349
>gi|38045908 laminin alpha 3 subunit isoform 2 [Homo sapiens]
Length = 1724
Score = 30.8 bits (68), Expect = 2.0
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 132 DTKKISTVKDIS-QAASNQIPELYLKLLKLEQETEPLRNINRALREENVLLKASLAKTAS 190
D KK T D S +N++P+L+ K+ + Q+ PL NI+ + L++ A+ A+
Sbjct: 718 DFKKALTDADNSVNKLTNKLPDLWRKIESINQQLLPLGNISDNMDRIRELIQQ--ARDAA 775
Query: 191 GQAPKPSNTLKISGMTAQLPS 211
+ P SG+ +LP+
Sbjct: 776 SKVAVPMRFNGKSGVEVRLPN 796
>gi|167234405 hypothetical protein LOC284325 [Homo sapiens]
Length = 351
Score = 30.8 bits (68), Expect = 2.0
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 14/74 (18%)
Query: 287 SAVPSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGIPSSQGYLPPQEVDQMLRP--- 343
S++PSPP P P SA+PSPP +P +P LPP P
Sbjct: 24 SSIPSPPLP------PSPLDFSALPSPPWSQQTPVPPPLP-----LPPPPAATGPAPRHV 72
Query: 344 FIHQRSQMFKDLGD 357
F ++SQ+ K+ D
Sbjct: 73 FGLEKSQLLKEAFD 86
>gi|241982780 programmed cell death 6 interacting protein isoform 2
[Homo sapiens]
Length = 873
Score = 30.4 bits (67), Expect = 2.7
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 268 DVYAEAEEQGEEALLDLLLSAV--PSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGI 325
D+ + + +E L DL S PS PS T P A P+PPT RT+P
Sbjct: 698 DIVFARKTERDELLKDLQQSIAREPSAPSIPTPAYQSSPAGGHA-PTPPTPAPRTMPPTK 756
Query: 326 PSSQGYLPP 334
P PP
Sbjct: 757 PQPPARPPP 765
>gi|22027538 programmed cell death 6 interacting protein isoform 1
[Homo sapiens]
Length = 868
Score = 30.4 bits (67), Expect = 2.7
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 268 DVYAEAEEQGEEALLDLLLSAV--PSPPSRHTTCSLPFPFSASAVPSPPTLVSRTLPQGI 325
D+ + + +E L DL S PS PS T P A P+PPT RT+P
Sbjct: 693 DIVFARKTERDELLKDLQQSIAREPSAPSIPTPAYQSSPAGGHA-PTPPTPAPRTMPPTK 751
Query: 326 PSSQGYLPP 334
P PP
Sbjct: 752 PQPPARPPP 760
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,427,096
Number of Sequences: 37866
Number of extensions: 668986
Number of successful extensions: 3099
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 2994
Number of HSP's gapped (non-prelim): 186
length of query: 372
length of database: 18,247,518
effective HSP length: 104
effective length of query: 268
effective length of database: 14,309,454
effective search space: 3834933672
effective search space used: 3834933672
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.