Guide to the Human Genome
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Name: IGF2BP1 Sequence: fasta or formatted (577aa) NCBI GI: 56237027
Description:

insulin-like growth factor 2 mRNA binding protein 1 isoform 1

Referenced in:

hnRNP

Other entries for this name:
alt prot [438aa] insulin-like growth factor 2 mRNA binding protein 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         54           2
 C cysteine            1.0          6           2
 D aspartate           2.9         17           1
 E glutamate           7.8         45           2
 F phenylalanine       2.4         14           2
 G glycine             6.9         40           2
 H histidine           2.4         14           1
 I isoleucine          7.5         43           2
 K lysine              8.1         47           2
 L leucine             6.1         35           2
 M methionine          1.9         11           1
 N asparagine          4.3         25           2
 P proline             5.7         33           4
 Q glutamine           7.6         44           3
 R arginine            5.0         29           2
 S serine              6.2         36           3
 T threonine           4.7         27           1
 V valine              7.5         43           3
 W tryptophan          0.3          2           1
 Y tyrosine            2.1         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   insulin-like growth factor 2 mRNA binding protein 1 ... 
IGF2BP3               0.736   insulin-like growth factor 2 mRNA binding protein 3 ...
IGF2BP2               0.677   insulin-like growth factor 2 mRNA binding protein 2 ...
IGF2BP2               0.647   insulin-like growth factor 2 mRNA binding protein 2 ...
IGF2BP1               0.518   insulin-like growth factor 2 mRNA binding protein 1...
PCBP3                 0.052   poly(rC) binding protein 3 isoform 2 
PCBP2                 0.047   poly(rC) binding protein 2 isoform g 
FUBP3                 0.045   far upstream element (FUSE) binding protein 3 [Homo...
PCBP3                 0.044   poly(rC) binding protein 3 isoform 1 
PCBP1                 0.043   poly(rC) binding protein 1 
PCBP2                 0.042   poly(rC) binding protein 2 isoform c 
PCBP4                 0.042   poly(rC) binding protein 4 isoform c 
PCBP4                 0.042   poly(rC) binding protein 4 isoform c 
PCBP2                 0.041   poly(rC) binding protein 2 isoform f 
PCBP2                 0.041   poly(rC) binding protein 2 isoform e 
PCBP2                 0.041   poly(rC) binding protein 2 isoform d 
PCBP2                 0.041   poly(rC) binding protein 2 isoform b 
PCBP2                 0.041   poly(rC) binding protein 2 isoform a 
KHSRP                 0.040   KH-type splicing regulatory protein 
FUBP1                 0.039   far upstream element-binding protein 
NOVA1                 0.038   neuro-oncological ventral antigen 1 isoform 1 
NOVA1                 0.032   neuro-oncological ventral antigen 1 isoform 2 
HDLBP                 0.032   high density lipoprotein binding protein 
HDLBP                 0.032   high density lipoprotein binding protein 
NOVA2                 0.031   neuro-oncological ventral antigen 2 
TDRKH                 0.031   tudor and KH domain containing isoform a 
TDRKH                 0.031   tudor and KH domain containing isoform a 
TDRKH                 0.031   tudor and KH domain containing isoform a 
HNRNPK                0.030   heterogeneous nuclear ribonucleoprotein K isoform a ...
HNRNPK                0.030   heterogeneous nuclear ribonucleoprotein K isoform b ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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