Search of human proteins with 239741505

Search of human proteins with 239741505

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239741505 PREDICTED: hypothetical protein XP_002342218 [Homo
sapiens]
         (343 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239741505 PREDICTED: hypothetical protein XP_002342218 [Homo ...   703   0.0  
gi|239747641 PREDICTED: hypothetical protein XP_002347916 [Homo ...   206   3e-53
gi|189491742 ataxin 7 isoform b [Homo sapiens]                         38   0.012
gi|4506797 ataxin 7 isoform a [Homo sapiens]                           38   0.012
gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo ...    38   0.015
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]         37   0.026
gi|239753698 PREDICTED: hypothetical protein [Homo sapiens]            37   0.034
gi|239748278 PREDICTED: hypothetical protein [Homo sapiens]            37   0.034
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re...    37   0.034
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re...    37   0.034
gi|118498345 AT-binding transcription factor 1 [Homo sapiens]          36   0.057
gi|188536004 zinc finger protein 469 [Homo sapiens]                    35   0.075
gi|91208420 bassoon protein [Homo sapiens]                             35   0.075
gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]    35   0.098
gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]    35   0.098
gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]      35   0.098
gi|38569475 metaxin 1 isoform 1 [Homo sapiens]                         35   0.13 
gi|38569477 metaxin 1 isoform 2 [Homo sapiens]                         35   0.13 
gi|239756047 PREDICTED: heparan sulfate 6-O-sulfotransferase 3 [...    35   0.13 
gi|45580707 heparan sulfate 6-O-sulfotransferase 3 [Homo sapiens]      35   0.13 
gi|44955921 ELK3 protein [Homo sapiens]                                34   0.17 
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]           34   0.22 
gi|169168105 PREDICTED: hypothetical protein [Homo sapiens]            34   0.22 
gi|239745211 PREDICTED: hypothetical protein XP_002343409 [Homo ...    34   0.22 
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]           34   0.22 
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]           34   0.22 
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]            33   0.28 
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]            33   0.28 
gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens]      33   0.28 
gi|30089916 phosphofurin acidic cluster sorting protein 1 [Homo ...    33   0.28 

>gi|239741505 PREDICTED: hypothetical protein XP_002342218 [Homo
           sapiens]
          Length = 343

 Score =  703 bits (1814), Expect = 0.0
 Identities = 343/343 (100%), Positives = 343/343 (100%)

Query: 1   MMPFVVTYCVDVGSVVEAERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQ 60
           MMPFVVTYCVDVGSVVEAERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQ
Sbjct: 1   MMPFVVTYCVDVGSVVEAERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQ 60

Query: 61  QQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDGWVVESRRRGNAPDSGTAP 120
           QQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDGWVVESRRRGNAPDSGTAP
Sbjct: 61  QQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDGWVVESRRRGNAPDSGTAP 120

Query: 121 TPLPLGRVRGPIRLTLCLILCSLLWRFARKRGLTLRGKVTSVQHKPVSDGGPKSSKTLGL 180
           TPLPLGRVRGPIRLTLCLILCSLLWRFARKRGLTLRGKVTSVQHKPVSDGGPKSSKTLGL
Sbjct: 121 TPLPLGRVRGPIRLTLCLILCSLLWRFARKRGLTLRGKVTSVQHKPVSDGGPKSSKTLGL 180

Query: 181 EKLAGKAAEHLTLFSNYRLSGAVCHDAPGEAPWIWKATRDIWSGQPTHKPGKAATLAQAS 240
           EKLAGKAAEHLTLFSNYRLSGAVCHDAPGEAPWIWKATRDIWSGQPTHKPGKAATLAQAS
Sbjct: 181 EKLAGKAAEHLTLFSNYRLSGAVCHDAPGEAPWIWKATRDIWSGQPTHKPGKAATLAQAS 240

Query: 241 DTARPRASHSPGPGKAEIKSRRWQGGKERSSFILLQRKPSPVSASSVHTWPALQRISPPQ 300
           DTARPRASHSPGPGKAEIKSRRWQGGKERSSFILLQRKPSPVSASSVHTWPALQRISPPQ
Sbjct: 241 DTARPRASHSPGPGKAEIKSRRWQGGKERSSFILLQRKPSPVSASSVHTWPALQRISPPQ 300

Query: 301 KHLPRQPGVGGWDSSSLQALEQHLPTHFTGRCKMIAAAAFEKL 343
           KHLPRQPGVGGWDSSSLQALEQHLPTHFTGRCKMIAAAAFEKL
Sbjct: 301 KHLPRQPGVGGWDSSSLQALEQHLPTHFTGRCKMIAAAAFEKL 343


>gi|239747641 PREDICTED: hypothetical protein XP_002347916 [Homo
           sapiens]
          Length = 193

 Score =  206 bits (523), Expect = 3e-53
 Identities = 111/144 (77%), Positives = 111/144 (77%), Gaps = 15/144 (10%)

Query: 1   MMPFVVTYCVDVGSVVEAERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQ 60
           MMPFVVTYCVDVGSVVEAERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQ
Sbjct: 1   MMPFVVTYCVDVGSVVEAERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQ 60

Query: 61  QQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGD--------------GWVVE 106
           QQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGD              G    
Sbjct: 61  QQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTP 120

Query: 107 SRRRGNAPDSGTAPTPLPLGRVRG 130
             R G       AP P P G  RG
Sbjct: 121 GNRGGERRGERRAP-PRPAGAPRG 143


>gi|189491742 ataxin 7 isoform b [Homo sapiens]
          Length = 945

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 8/52 (15%)

Query: 51  AAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDG 102
           AA AA R +QQQ+QQQ+P P  P    R QH P      P    R E+GG G
Sbjct: 23  AAAAAARQQQQQQQQQQPPPPQPQ---RQQHPP-----PPPRRTRPEDGGPG 66


>gi|4506797 ataxin 7 isoform a [Homo sapiens]
          Length = 892

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 8/52 (15%)

Query: 51  AAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDG 102
           AA AA R +QQQ+QQQ+P P  P    R QH P      P    R E+GG G
Sbjct: 23  AAAAAARQQQQQQQQQQPPPPQPQ---RQQHPP-----PPPRRTRPEDGGPG 66


>gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo
           sapiens]
          Length = 600

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 13/109 (11%)

Query: 217 ATRDIWSGQPTHKP-GKAATLAQASDTARPRASHS-PGPGKAEIKSRRWQGGKERSSFIL 274
           A   +W G+  HK  G+ AT A+ +DTAR R   S P    A  +  R     + S    
Sbjct: 36  ALSGLWGGRSHHKACGEIATGARGADTARCRWIQSCPLQAVAAAQKERALEISQSSGEPQ 95

Query: 275 LQRKPSPVSASSV---HTWPALQRISPPQKHL--------PRQPGVGGW 312
            QR P PVSA ++      P L   + P +H         PR+   GGW
Sbjct: 96  PQRSPGPVSAQALPPPQRTPTLPPPATPHQHTLVVCLPSHPRRHRRGGW 144


>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
          Length = 953

 Score = 37.0 bits (84), Expect = 0.026
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 6/59 (10%)

Query: 57  RPRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGP-AARTEEGGDGWVVESRRRGNAP 114
           R +++++++ +P+PRSP P +R    P+  +   GP   R +E  D W     RR  +P
Sbjct: 472 REKEREKEKGKPKPRSPQPPSRQAEPPKKEAATTGPQVKRADEWKDPW-----RRSKSP 525


>gi|239753698 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 416

 Score = 36.6 bits (83), Expect = 0.034
 Identities = 37/131 (28%), Positives = 44/131 (33%), Gaps = 31/131 (23%)

Query: 13  GSVVEAERPTQLQ----GRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQRP 68
           GS + A  P  +Q     RR E         P S  E +  L A A  + +  Q Q Q P
Sbjct: 102 GSAIPAHLPRSVQRVLGARRTE---------PRSAGERRRALPAAAGRKTKTWQSQNQSP 152

Query: 69  RPR------------SPDPAARGQHVP------ELRSRKPGPAARTEEGGDGWVVESRRR 110
           R               P+P  R  H P       + SR P P    E   D   VES  R
Sbjct: 153 RSARAPHTAGAGPGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSAR 212

Query: 111 GNAPDSGTAPT 121
                 G  PT
Sbjct: 213 AGDQRRGREPT 223


>gi|239748278 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 416

 Score = 36.6 bits (83), Expect = 0.034
 Identities = 37/131 (28%), Positives = 44/131 (33%), Gaps = 31/131 (23%)

Query: 13  GSVVEAERPTQLQ----GRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQRP 68
           GS + A  P  +Q     RR E         P S  E +  L A A  + +  Q Q Q P
Sbjct: 102 GSAIPAHLPRSVQRVLGARRTE---------PRSAGERRRALPAAAGRKTKTWQSQNQSP 152

Query: 69  RPR------------SPDPAARGQHVP------ELRSRKPGPAARTEEGGDGWVVESRRR 110
           R               P+P  R  H P       + SR P P    E   D   VES  R
Sbjct: 153 RSARAPHTAGAGPGPGPEPRGRRSHSPLGFFSPSVPSRSPLPEREPERTDDRSRVESSAR 212

Query: 111 GNAPDSGTAPT 121
                 G  PT
Sbjct: 213 AGDQRRGREPT 223


>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a2 isoform a [Homo sapiens]
          Length = 1590

 Score = 36.6 bits (83), Expect = 0.034
 Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 17/113 (15%)

Query: 28  RDEVIP-VLQLQVP----LSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHV 82
           R + +P  LQL V     L G + ++    Q   + +QQQ+QQQ+P+ + P P  + Q  
Sbjct: 194 RGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQ 253

Query: 83  PEL----RSRKPGPAARTEEGGDGWVVESRRRGNAPDSGTAPTPLPLGRVRGP 131
           P L    R   PGP    E  G      + ++   P  G  P+P P    + P
Sbjct: 254 PALVNYNRPSGPGP----ELSGP----STPQKLPVPAPGGRPSPAPPAAAQPP 298


>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a2 isoform b [Homo sapiens]
          Length = 1572

 Score = 36.6 bits (83), Expect = 0.034
 Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 17/113 (15%)

Query: 28  RDEVIP-VLQLQVP----LSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHV 82
           R + +P  LQL V     L G + ++    Q   + +QQQ+QQQ+P+ + P P  + Q  
Sbjct: 194 RGQPLPETLQLAVQGKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQ 253

Query: 83  PEL----RSRKPGPAARTEEGGDGWVVESRRRGNAPDSGTAPTPLPLGRVRGP 131
           P L    R   PGP    E  G      + ++   P  G  P+P P    + P
Sbjct: 254 PALVNYNRPSGPGP----ELSGP----STPQKLPVPAPGGRPSPAPPAAAQPP 298


>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
          Length = 3703

 Score = 35.8 bits (81), Expect = 0.057
 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)

Query: 41   LSGAEGKELLAAQAAHRPRQQQRQQQRPRPRS--PDPAARGQHVPEL-----RSRKPGPA 93
            LS     +   A    +P QQQ+QQQ+P+ +   P PAA+    P+L     + RK   +
Sbjct: 3178 LSSPTPAQATMAMGPQQPPQQQQQQQQPQVQQPPPPPAAQPPPTPQLPLQQQQQRKDKDS 3237

Query: 94   ARTEE-------GGDGWVVESRRRGNAPDSGTAPTPLPL 125
             + +E        G+   V  + +G AP +  A    PL
Sbjct: 3238 EKVKEKEKAHKGKGEPLPVPKKEKGEAPTATAATISAPL 3276


>gi|188536004 zinc finger protein 469 [Homo sapiens]
          Length = 3925

 Score = 35.4 bits (80), Expect = 0.075
 Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 24/110 (21%)

Query: 43   GAEGKELLA--AQAAHRPRQ-----QQRQQQRPRPRSPD---PAARGQHVPELR------ 86
            GA GKEL+    Q  +R R+     +  + ++P PR P       RG+   E+       
Sbjct: 1044 GAWGKELILKIVQQKNRLREYDFASESEEDEQPPPRGPGFRGRRGRGEKRKEVELTQGPR 1103

Query: 87   ---SRKPGPAARTEEGGDGWVVESRRRGNAPDSGTAPTPLPLGRVRGPIR 133
                +KP  AAR E GGDG        G     G+ P P    + RGP R
Sbjct: 1104 EDEPQKPRKAARQEAGGDGAPANPEEPG-----GSRPGPGRSPQARGPSR 1148


>gi|91208420 bassoon protein [Homo sapiens]
          Length = 3926

 Score = 35.4 bits (80), Expect = 0.075
 Identities = 51/209 (24%), Positives = 78/209 (37%), Gaps = 55/209 (26%)

Query: 14   SVVEAERPTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQQQRQQ----QRPR 69
            S  E +   QLQGR+    P  Q Q P S    +++ +  A+ +P+ QQ+QQ    Q P+
Sbjct: 3737 SKAEPQAQPQLQGRQAAPGPQ-QSQSPSS----RQIPSGAASRQPQTQQQQQGLGLQPPQ 3791

Query: 70   --------------------PRSPDPAARGQHVPELRS--RKPGPAARTEEGGDGWVVES 107
                                P +  PA + Q  P   +  +  GP    +  G     ++
Sbjct: 3792 QALTQARLQQQSQPTTRGSAPAASQPAGKPQPGPSTATGPQPAGPPRAEQTNGSKGTAKA 3851

Query: 108  RRRGNAPDSGTAPTPLPLGRVRGPIRLTLCLILCSLLWRFARKRGLTLRGKVTSVQHKPV 167
             ++G AP +  AP P P G                       K G    G   +   +P 
Sbjct: 3852 PQQGRAPQAQPAPGPGPAG----------------------VKAGARPGGTPGAPAGQPG 3889

Query: 168  SDGGPKSSKTL--GLEKLAGKAAEHLTLF 194
            +DG    SK L  G  + AGK  E ++ F
Sbjct: 3890 ADGESVFSKILPGGAAEQAGKLTEAVSAF 3918


>gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]
          Length = 166

 Score = 35.0 bits (79), Expect = 0.098
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 8/79 (10%)

Query: 58  PRQQQRQQQRPRP---RSPDPAARGQHVPELRSRKPGPAARTEEGGDGWVVESRRRGNAP 114
           P+Q  +QQQ P P   +   P  +G H P  + R  GP    ++GG       R +G   
Sbjct: 74  PQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGP---PQQGGHPRPPRGRPQGPPQ 130

Query: 115 DSG--TAPTPLPLGRVRGP 131
             G    P P P G+ +GP
Sbjct: 131 QGGHQQGPPPPPPGKPQGP 149


>gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
          Length = 166

 Score = 35.0 bits (79), Expect = 0.098
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 8/79 (10%)

Query: 58  PRQQQRQQQRPRP---RSPDPAARGQHVPELRSRKPGPAARTEEGGDGWVVESRRRGNAP 114
           P+Q  +QQQ P P   +   P  +G H P  + R  GP    ++GG       R +G   
Sbjct: 74  PQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGP---PQQGGHPRPPRGRPQGPPQ 130

Query: 115 DSG--TAPTPLPLGRVRGP 131
             G    P P P G+ +GP
Sbjct: 131 QGGHQQGPPPPPPGKPQGP 149


>gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
          Length = 166

 Score = 35.0 bits (79), Expect = 0.098
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 8/79 (10%)

Query: 58  PRQQQRQQQRPRP---RSPDPAARGQHVPELRSRKPGPAARTEEGGDGWVVESRRRGNAP 114
           P+Q  +QQQ P P   +   P  +G H P  + R  GP    ++GG       R +G   
Sbjct: 74  PQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQGP---PQQGGHPRPPRGRPQGPPQ 130

Query: 115 DSG--TAPTPLPLGRVRGP 131
             G    P P P G+ +GP
Sbjct: 131 QGGHQQGPPPPPPGKPQGP 149


>gi|38569475 metaxin 1 isoform 1 [Homo sapiens]
          Length = 466

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 52/197 (26%), Positives = 71/197 (36%), Gaps = 43/197 (21%)

Query: 59  RQQQRQQQRPRPRSPDPAA----RGQHVPELRS--RKPGPAARTEEGGDGWVVESRRRGN 112
           +  Q   +R RPRSP+PAA    RG      R   R+ GP A +   G  W+      G 
Sbjct: 30  KSPQTWPRRTRPRSPEPAAPSGVRGSTWTRRRDTPRRAGPTALSRYVGHLWM------GR 83

Query: 113 APDSGTAPTPLPLGRVRGPIRLTLCLILCSLLWRFARKRGLTLRGKVTSVQHKPVSDGGP 172
            P S  A  P+P        R +L               G++  G +T+     V+ GGP
Sbjct: 84  RPPSPEARGPVPRSSAASRARRSLA------------SPGIS-PGPLTATIGGAVAGGGP 130

Query: 173 KSSKTLGLEKLAGKAAEHLTLFSNYRLSGAVCHDAPGEAPWIWKATRDIWSGQPTHKPGK 232
           +           G+A  H  +F   R+       AP E  + W      W G P+     
Sbjct: 131 RQ----------GRAEAHKEVFPGQRVGKMA---APMEL-FCWSGG---W-GLPSVDLDS 172

Query: 233 AATLAQASDTARPRASH 249
            A L  A  T  P   H
Sbjct: 173 LAVLTYARFTGAPLKVH 189


>gi|38569477 metaxin 1 isoform 2 [Homo sapiens]
          Length = 435

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 52/197 (26%), Positives = 71/197 (36%), Gaps = 43/197 (21%)

Query: 59  RQQQRQQQRPRPRSPDPAA----RGQHVPELRS--RKPGPAARTEEGGDGWVVESRRRGN 112
           +  Q   +R RPRSP+PAA    RG      R   R+ GP A +   G  W+      G 
Sbjct: 30  KSPQTWPRRTRPRSPEPAAPSGVRGSTWTRRRDTPRRAGPTALSRYVGHLWM------GR 83

Query: 113 APDSGTAPTPLPLGRVRGPIRLTLCLILCSLLWRFARKRGLTLRGKVTSVQHKPVSDGGP 172
            P S  A  P+P        R +L               G++  G +T+     V+ GGP
Sbjct: 84  RPPSPEARGPVPRSSAASRARRSLA------------SPGIS-PGPLTATIGGAVAGGGP 130

Query: 173 KSSKTLGLEKLAGKAAEHLTLFSNYRLSGAVCHDAPGEAPWIWKATRDIWSGQPTHKPGK 232
           +           G+A  H  +F   R+       AP E  + W      W G P+     
Sbjct: 131 RQ----------GRAEAHKEVFPGQRVGKMA---APMEL-FCWSGG---W-GLPSVDLDS 172

Query: 233 AATLAQASDTARPRASH 249
            A L  A  T  P   H
Sbjct: 173 LAVLTYARFTGAPLKVH 189


>gi|239756047 PREDICTED: heparan sulfate 6-O-sulfotransferase 3
           [Homo sapiens]
          Length = 471

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query: 52  AQAAHRPRQQ--QRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDGWVVESRR 109
           A+ A  P ++  +R Q  P PR P    RG   PE    +PG     EE  +    E   
Sbjct: 55  ARRAQAPPEEWERRPQLPPPPRGPPEGPRGAAAPEEEDEEPGDPREGEEEEE----EDEP 110

Query: 110 RGNAPDSGTAPTPLP 124
              AP++G+ P  +P
Sbjct: 111 DPEAPENGSLPRFVP 125


>gi|45580707 heparan sulfate 6-O-sulfotransferase 3 [Homo sapiens]
          Length = 471

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query: 52  AQAAHRPRQQ--QRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGDGWVVESRR 109
           A+ A  P ++  +R Q  P PR P    RG   PE    +PG     EE  +    E   
Sbjct: 55  ARRAQAPPEEWERRPQLPPPPRGPPEGPRGAAAPEEEDEEPGDPREGEEEEE----EDEP 110

Query: 110 RGNAPDSGTAPTPLP 124
              AP++G+ P  +P
Sbjct: 111 DPEAPENGSLPRFVP 125


>gi|44955921 ELK3 protein [Homo sapiens]
          Length = 407

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 36/141 (25%), Positives = 53/141 (37%), Gaps = 21/141 (14%)

Query: 167 VSDGGPKSSKTLGLEKLAGKAAEHLTLFSNYRLSGAVCHDAPGEAPWIWKATRDIWSGQP 226
           +S   P SS++  L   +   +EH +LF       A CHD+    P       ++ SG  
Sbjct: 233 ISSASPFSSRSPSLSPNSPLPSEHRSLFLE-----AACHDSDSLEPL------NLSSGSK 281

Query: 227 THKPG---KAATLAQASDTARPRASHSPGPGKAEIKSRRWQGGKERSSFILLQRK----- 278
           T  P    KA        +A P        G   + S     G    +F   Q       
Sbjct: 282 TKSPSLPPKAKKPKGLEISAPPLVLSGTDIGSIALNSPALPSGSLTPAFFTAQTPNGLLL 341

Query: 279 -PSPVSASSVHTWPALQRISP 298
            PSP+  SS+H W +L  ++P
Sbjct: 342 TPSPL-LSSIHFWSSLSPVAP 361


>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
          Length = 460

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 38/151 (25%), Positives = 50/151 (33%), Gaps = 16/151 (10%)

Query: 40  PLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVP-ELRSRKPGPAARTEE 98
           P   AE +    AQ AH P         P    P P  R    P     R+P P      
Sbjct: 229 PRGRAESRGSGPAQPAHLPLPGPAHSPAP----PAPELREGRAPGSTAGRRPRPREPQAA 284

Query: 99  GGDGWVVESRRRGNAPDSGTAPTPLPLGRVRGPIRLTLCLILCSLLWRFARKRGLTLRGK 158
              G      RRG+   +G++  P   G      R   C        R  R+RG    G+
Sbjct: 285 EESGCATVGLRRGDCDRAGSSQPPATSGNGE---RCRFC--------RRRRRRGGGGEGE 333

Query: 159 VTSVQHKPVSDGGPKSSKTLGLEKLAGKAAE 189
            T   H P S  G +  + +G   L   + E
Sbjct: 334 GTHATHGPASPPGRRHDEEVGAAVLRAGSGE 364


>gi|169168105 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 173

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 35/118 (29%), Positives = 45/118 (38%), Gaps = 15/118 (12%)

Query: 21  PTQLQGRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRS-PDPAARG 79
           P+ L+G      P  + Q P +GA G+    A     PR       RP  R+  DP  R 
Sbjct: 26  PSTLEGLESPPHP--ETQRPRAGAGGRRRWGATGGEGPR-------RPATRACADPGTRP 76

Query: 80  QHVPELRSRK-PGPAARTEEGGDGWVVESRRRGNAPDSGTAPTPLPLGRVRGPIRLTL 136
                 R    PG    +   GDG     R R  AP    A  PLP+    G ++L L
Sbjct: 77  FTYRWNRDAPFPGRGRFSRTRGDG----KRARTEAPSGSAAEKPLPVAAADGRLKLQL 130


>gi|239745211 PREDICTED: hypothetical protein XP_002343409 [Homo
           sapiens]
          Length = 1281

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 14/102 (13%)

Query: 210 EAPWIWKATRDIWSGQPTHKPGKAATLAQASDTARPRASHSPGPGKAEIKSRRWQGGKER 269
           E+PWIW A   I S      P       +A +    R + SP   +  +  ++ Q   ER
Sbjct: 370 ESPWIWPAACSIPSSPKQRGP-------EAEELRTRREASSPSDRRFRLNLKQLQRKLER 422

Query: 270 SSFILLQRKPSPVSASSVHTWPALQRISPPQKHLPRQPGVGG 311
           +  +LL R  SP    +       ++ + P + L RQ  V G
Sbjct: 423 AKILLLARGCSPRGGKA-------RKPAKPGRALKRQLEVSG 457


>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
          Length = 460

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 38/151 (25%), Positives = 50/151 (33%), Gaps = 16/151 (10%)

Query: 40  PLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVP-ELRSRKPGPAARTEE 98
           P   AE +    AQ AH P         P    P P  R    P     R+P P      
Sbjct: 229 PRGRAESRGSGPAQPAHLPLPGPAHSPAP----PAPELREGRAPGSTAGRRPRPREPQAA 284

Query: 99  GGDGWVVESRRRGNAPDSGTAPTPLPLGRVRGPIRLTLCLILCSLLWRFARKRGLTLRGK 158
              G      RRG+   +G++  P   G      R   C        R  R+RG    G+
Sbjct: 285 EESGCATVGLRRGDCDRAGSSQPPATSGNGE---RCRFC--------RRRRRRGGGGEGE 333

Query: 159 VTSVQHKPVSDGGPKSSKTLGLEKLAGKAAE 189
            T   H P S  G +  + +G   L   + E
Sbjct: 334 GTHATHGPASPPGRRHDEEVGAAVLRAGSGE 364


>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
          Length = 460

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 38/151 (25%), Positives = 50/151 (33%), Gaps = 16/151 (10%)

Query: 40  PLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVP-ELRSRKPGPAARTEE 98
           P   AE +    AQ AH P         P    P P  R    P     R+P P      
Sbjct: 229 PRGRAESRGSGPAQPAHLPLPGPAHSPAP----PAPELREGRAPGSTAGRRPRPREPQAA 284

Query: 99  GGDGWVVESRRRGNAPDSGTAPTPLPLGRVRGPIRLTLCLILCSLLWRFARKRGLTLRGK 158
              G      RRG+   +G++  P   G      R   C        R  R+RG    G+
Sbjct: 285 EESGCATVGLRRGDCDRAGSSQPPATSGNGE---RCRFC--------RRRRRRGGGGEGE 333

Query: 159 VTSVQHKPVSDGGPKSSKTLGLEKLAGKAAE 189
            T   H P S  G +  + +G   L   + E
Sbjct: 334 GTHATHGPASPPGRRHDEEVGAAVLRAGSGE 364


>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 6/90 (6%)

Query: 46  GKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARG---QHVPELRSRKPGPAART-EEGGD 101
           G E  + +   +PR+ +R    PR   P P  R    +  P L   K G + R  + GG 
Sbjct: 99  GVEAASGEERSQPRRPRRPPPAPRRPRPAPGRRKSLYEAAPLLTREKGGRSGRRGDRGGS 158

Query: 102 GWV-VESRRRGNAPDSGTAPTPLPLGRVRG 130
           GW    + R G   DS    T  P G  RG
Sbjct: 159 GWSHGHTARVGGTGDSSAGLTTFP-GSSRG 187


>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 6/90 (6%)

Query: 46  GKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARG---QHVPELRSRKPGPAART-EEGGD 101
           G E  + +   +PR+ +R    PR   P P  R    +  P L   K G + R  + GG 
Sbjct: 99  GVEAASGEERSQPRRPRRPPPAPRRPRPAPGRRKSLYEAAPLLTREKGGRSGRRGDRGGS 158

Query: 102 GWV-VESRRRGNAPDSGTAPTPLPLGRVRG 130
           GW    + R G   DS    T  P G  RG
Sbjct: 159 GWSHGHTARVGGTGDSSAGLTTFP-GSSRG 187


>gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens]
          Length = 1159

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 71  RSPDPAARGQHVPELRSRKPGPAARTEEGGDGWVVESRRRGNAPDS-GTAPTPLP 124
           RSP+P   G H    R  +  PA R E GG     + + RG  P + G +P P P
Sbjct: 51  RSPEPGRLGPHAQLTRVPRSPPAGRAEPGGG---EDRQARGTEPGAPGPSPGPAP 102


>gi|30089916 phosphofurin acidic cluster sorting protein 1 [Homo
           sapiens]
          Length = 963

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)

Query: 42  SGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPELRSRKPGPAARTEEGGD 101
           SG  G  +  AQ+  +P  QQ+QQQ   P+ P P    Q      S     A+ +     
Sbjct: 18  SGQRGSGV--AQSPQQPPPQQQQQQ--PPQQPTPPKLAQATSSSSSTSAAAASSSSSSTS 73

Query: 102 GWVVESRRRGNAPDSGTAPTPLPLGRVRGPIRLTL 136
             +  +   G+AP  G  P     GR   P+++ L
Sbjct: 74  TSMAVAVASGSAPPGGPGP-----GRTPAPVQMNL 103


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,372,503
Number of Sequences: 37866
Number of extensions: 917604
Number of successful extensions: 5592
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 165
Number of HSP's that attempted gapping in prelim test: 5220
Number of HSP's gapped (non-prelim): 416
length of query: 343
length of database: 18,247,518
effective HSP length: 103
effective length of query: 240
effective length of database: 14,347,320
effective search space: 3443356800
effective search space used: 3443356800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.