Search of human proteins with 239740940

Search of human proteins with 239740940

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239740940 PREDICTED: hypothetical protein XP_002344108 [Homo
sapiens]
         (168 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239740940 PREDICTED: hypothetical protein XP_002344108 [Homo ...   361   e-100
gi|169211979 PREDICTED: hypothetical protein [Homo sapiens]           349   7e-97
gi|38788260 bromodomain PHD finger transcription factor isoform ...   142   1e-34
gi|38788274 bromodomain PHD finger transcription factor isoform ...   142   1e-34
gi|117190342 PHD finger protein 2 [Homo sapiens]                       53   1e-07
gi|32698700 PHD finger protein 8 [Homo sapiens]                        52   3e-07
gi|90093355 jumonji C domain containing histone demethylase 1 ho...    50   1e-06
gi|156142182 CXXC finger 1 (PHD domain) isoform 1 [Homo sapiens]       47   8e-06
gi|156142180 CXXC finger 1 (PHD domain) isoform 2 [Homo sapiens]       47   8e-06
gi|7662018 PHD finger protein 3 [Homo sapiens]                         45   2e-05
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]       44   7e-05
gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]       44   7e-05
gi|18375619 death inducer-obliterator 1 isoform a [Homo sapiens]       44   7e-05
gi|18375617 death inducer-obliterator 1 isoform a [Homo sapiens]       44   7e-05
gi|148612882 cat eye syndrome chromosome region, candidate 2 [Ho...    42   3e-04
gi|153791535 general control of amino acid synthesis 5-like 2 [H...    39   0.003
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho...    35   0.023
gi|40805843 K(lysine) acetyltransferase 2B [Homo sapiens]              35   0.030
gi|47419911 transcriptional intermediary factor 1 alpha isoform ...    35   0.030
gi|47419909 transcriptional intermediary factor 1 alpha isoform ...    35   0.030
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]      35   0.040
gi|18034775 PHD finger protein 20 [Homo sapiens]                       34   0.052
gi|74027251 tripartite motif-containing 33 protein isoform beta ...    34   0.067
gi|74027249 tripartite motif-containing 33 protein isoform alpha...    34   0.067
gi|34452707 bromodomain containing 8 isoform 2 [Homo sapiens]          33   0.15 
gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens]      32   0.20 
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [...    32   0.33 
gi|7657218 bromodomain-containing protein 4 isoform short [Homo ...    32   0.33 
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ...    32   0.33 
gi|50345997 E1A binding protein p300 [Homo sapiens]                    31   0.44 

>gi|239740940 PREDICTED: hypothetical protein XP_002344108 [Homo
           sapiens]
          Length = 168

 Score =  361 bits (926), Expect = e-100
 Identities = 168/168 (100%), Positives = 168/168 (100%)

Query: 1   MKQGREDRFKYHAAQNDNYIVIFVVNTSRFYIGCDLCTNWYYGECVGIAEKEAKKMDVYI 60
           MKQGREDRFKYHAAQNDNYIVIFVVNTSRFYIGCDLCTNWYYGECVGIAEKEAKKMDVYI
Sbjct: 1   MKQGREDRFKYHAAQNDNYIVIFVVNTSRFYIGCDLCTNWYYGECVGIAEKEAKKMDVYI 60

Query: 61  CNDCKWAQEDSSEELYCICRTPAVTSEAELIDEYVCPQCQSTEDVMTVLTPLTEKDDEEL 120
           CNDCKWAQEDSSEELYCICRTPAVTSEAELIDEYVCPQCQSTEDVMTVLTPLTEKDDEEL
Sbjct: 61  CNDCKWAQEDSSEELYCICRTPAVTSEAELIDEYVCPQCQSTEDVMTVLTPLTEKDDEEL 120

Query: 121 KRAHKMARPFLEPVDPNDAPDYYGVIKEPVGTHELNLKFFQKSQCIFY 168
           KRAHKMARPFLEPVDPNDAPDYYGVIKEPVGTHELNLKFFQKSQCIFY
Sbjct: 121 KRAHKMARPFLEPVDPNDAPDYYGVIKEPVGTHELNLKFFQKSQCIFY 168


>gi|169211979 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 168

 Score =  349 bits (895), Expect = 7e-97
 Identities = 163/168 (97%), Positives = 164/168 (97%)

Query: 1   MKQGREDRFKYHAAQNDNYIVIFVVNTSRFYIGCDLCTNWYYGECVGIAEKEAKKMDVYI 60
           MKQGREDRFKYHAAQNDNYIVIF+VNT RFYIGCDLCTNWYYGECVGIAEKEAKKMDVYI
Sbjct: 1   MKQGREDRFKYHAAQNDNYIVIFIVNTFRFYIGCDLCTNWYYGECVGIAEKEAKKMDVYI 60

Query: 61  CNDCKWAQEDSSEELYCICRTPAVTSEAELIDEYVCPQCQSTEDVMTVLTPLTEKDDEEL 120
           CNDCK AQE SSEELYCICRTPAVTSEAELIDEYVCPQCQSTED MTVLTPLTEKDDEEL
Sbjct: 61  CNDCKQAQEGSSEELYCICRTPAVTSEAELIDEYVCPQCQSTEDAMTVLTPLTEKDDEEL 120

Query: 121 KRAHKMARPFLEPVDPNDAPDYYGVIKEPVGTHELNLKFFQKSQCIFY 168
           KRAHKMARPFLEPVDPNDAPDYYGVIKEPVGTHELNLKFFQKSQCIFY
Sbjct: 121 KRAHKMARPFLEPVDPNDAPDYYGVIKEPVGTHELNLKFFQKSQCIFY 168


>gi|38788260 bromodomain PHD finger transcription factor isoform 2
            [Homo sapiens]
          Length = 2903

 Score =  142 bits (359), Expect = 1e-34
 Identities = 76/129 (58%), Positives = 80/129 (62%), Gaps = 41/129 (31%)

Query: 28   SRFYIGCDLCTNWYYGECVGIAEKEAKKMDVYICNDCKWAQEDSSEELYCICRTPAVTSE 87
            S+FYIGCD C NWY+G CVGI +                                   SE
Sbjct: 2736 SKFYIGCDRCQNWYHGRCVGILQ-----------------------------------SE 2760

Query: 88   AELIDEYVCPQCQSTEDVMTVLTPLTEKDDEELKR------AHKMARPFLEPVDPNDAPD 141
            AELIDEYVCPQCQSTED MTVLTPLTEKD E LKR      AHKMA PFLEPVDPNDAPD
Sbjct: 2761 AELIDEYVCPQCQSTEDAMTVLTPLTEKDYEGLKRVLRSLQAHKMAWPFLEPVDPNDAPD 2820

Query: 142  YYGVIKEPV 150
            YYGVIKEP+
Sbjct: 2821 YYGVIKEPM 2829


>gi|38788274 bromodomain PHD finger transcription factor isoform 1
            [Homo sapiens]
          Length = 2920

 Score =  142 bits (359), Expect = 1e-34
 Identities = 76/129 (58%), Positives = 80/129 (62%), Gaps = 41/129 (31%)

Query: 28   SRFYIGCDLCTNWYYGECVGIAEKEAKKMDVYICNDCKWAQEDSSEELYCICRTPAVTSE 87
            S+FYIGCD C NWY+G CVGI +                                   SE
Sbjct: 2753 SKFYIGCDRCQNWYHGRCVGILQ-----------------------------------SE 2777

Query: 88   AELIDEYVCPQCQSTEDVMTVLTPLTEKDDEELKR------AHKMARPFLEPVDPNDAPD 141
            AELIDEYVCPQCQSTED MTVLTPLTEKD E LKR      AHKMA PFLEPVDPNDAPD
Sbjct: 2778 AELIDEYVCPQCQSTEDAMTVLTPLTEKDYEGLKRVLRSLQAHKMAWPFLEPVDPNDAPD 2837

Query: 142  YYGVIKEPV 150
            YYGVIKEP+
Sbjct: 2838 YYGVIKEPM 2846


>gi|117190342 PHD finger protein 2 [Homo sapiens]
          Length = 1096

 Score = 52.8 bits (125), Expect = 1e-07
 Identities = 18/40 (45%), Positives = 29/40 (72%)

Query: 26 NTSRFYIGCDLCTNWYYGECVGIAEKEAKKMDVYICNDCK 65
          + +RF I CD C +W++G CVG+ E+EA  +D+Y C +C+
Sbjct: 15 DVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCE 54


>gi|32698700 PHD finger protein 8 [Homo sapiens]
          Length = 1024

 Score = 51.6 bits (122), Expect = 3e-07
 Identities = 17/40 (42%), Positives = 30/40 (75%)

Query: 26 NTSRFYIGCDLCTNWYYGECVGIAEKEAKKMDVYICNDCK 65
          + +RF I CD+C +W++G CVG+ E++A  +D+Y C +C+
Sbjct: 15 DVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCE 54


>gi|90093355 jumonji C domain containing histone demethylase 1
          homolog D [Homo sapiens]
          Length = 941

 Score = 49.7 bits (117), Expect = 1e-06
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 26 NTSRFYIGCDLCTNWYYGECVGIAEKEAKKMDVYICNDC 64
          + +RF I CD+C +W++G CVG+ E  A  +D+Y C +C
Sbjct: 47 DVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNC 85


>gi|156142182 CXXC finger 1 (PHD domain) isoform 1 [Homo sapiens]
          Length = 660

 Score = 47.0 bits (110), Expect = 8e-06
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 30 FYIGCDLCTNWYYGECVGIAEKEAKKMDVYICNDCK 65
          F IGCD C  W++G+C+ I EK AK +  + C +C+
Sbjct: 39 FMIGCDNCNEWFHGDCIRITEKMAKAIREWYCRECR 74


>gi|156142180 CXXC finger 1 (PHD domain) isoform 2 [Homo sapiens]
          Length = 656

 Score = 47.0 bits (110), Expect = 8e-06
 Identities = 16/36 (44%), Positives = 24/36 (66%)

Query: 30 FYIGCDLCTNWYYGECVGIAEKEAKKMDVYICNDCK 65
          F IGCD C  W++G+C+ I EK AK +  + C +C+
Sbjct: 39 FMIGCDNCNEWFHGDCIRITEKMAKAIREWYCRECR 74


>gi|7662018 PHD finger protein 3 [Homo sapiens]
          Length = 2039

 Score = 45.4 bits (106), Expect = 2e-05
 Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 5/52 (9%)

Query: 28  SRFYIGCDLCTNWYYGECVGIAEKEAKKM----DVYICNDCKWAQEDSSEEL 75
           +RF +GC  C +W++G+CVG++  +A++M      Y+C  C  A+ED   E+
Sbjct: 729 NRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKC-CAEEDKKTEI 779


>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
          Length = 2240

 Score = 43.9 bits (102), Expect = 7e-05
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)

Query: 16  NDNYIVIFVVNTSRFYIGCDLCTNWYYGECVGIAEKEAKKM----DVYICNDC 64
           N  Y +    + +RF I CD C  W++G+CVGI+E   + +    + YIC +C
Sbjct: 267 NALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNC 319


>gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]
          Length = 1189

 Score = 43.9 bits (102), Expect = 7e-05
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)

Query: 16  NDNYIVIFVVNTSRFYIGCDLCTNWYYGECVGIAEKEAKKM----DVYICNDC 64
           N  Y +    + +RF I CD C  W++G+CVGI+E   + +    + YIC +C
Sbjct: 267 NALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNC 319


>gi|18375619 death inducer-obliterator 1 isoform a [Homo sapiens]
          Length = 562

 Score = 43.9 bits (102), Expect = 7e-05
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)

Query: 16  NDNYIVIFVVNTSRFYIGCDLCTNWYYGECVGIAEKEAKKM----DVYICNDC 64
           N  Y +    + +RF I CD C  W++G+CVGI+E   + +    + YIC +C
Sbjct: 267 NALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNC 319


>gi|18375617 death inducer-obliterator 1 isoform a [Homo sapiens]
          Length = 562

 Score = 43.9 bits (102), Expect = 7e-05
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)

Query: 16  NDNYIVIFVVNTSRFYIGCDLCTNWYYGECVGIAEKEAKKM----DVYICNDC 64
           N  Y +    + +RF I CD C  W++G+CVGI+E   + +    + YIC +C
Sbjct: 267 NALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNC 319


>gi|148612882 cat eye syndrome chromosome region, candidate 2 [Homo
           sapiens]
          Length = 1484

 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 18/40 (45%), Positives = 27/40 (67%)

Query: 119 ELKRAHKMARPFLEPVDPNDAPDYYGVIKEPVGTHELNLK 158
           ++ +AHK + PFLEPVD + AP+YY +IK P+    +  K
Sbjct: 448 DVVKAHKDSWPFLEPVDESYAPNYYQIIKAPMDISSMEKK 487


>gi|153791535 general control of amino acid synthesis 5-like 2 [Homo
           sapiens]
          Length = 837

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 15/29 (51%), Positives = 22/29 (75%)

Query: 122 RAHKMARPFLEPVDPNDAPDYYGVIKEPV 150
           ++H  A PF+EPV  ++APDYY VI+ P+
Sbjct: 745 KSHPSAWPFMEPVKKSEAPDYYEVIRFPI 773


>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
           sapiens]
          Length = 929

 Score = 35.4 bits (80), Expect = 0.023
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 32  IGCDLCTNWYYGECVGIAEKEAKKMDVYICNDCKWAQEDSSEE 74
           IGCD C +WY+  CVGI     ++M  + C  C   ++D   +
Sbjct: 881 IGCDDCDDWYHWPCVGIMTAPPEEMQ-WFCPKCANKKKDKKHK 922


>gi|40805843 K(lysine) acetyltransferase 2B [Homo sapiens]
          Length = 832

 Score = 35.0 bits (79), Expect = 0.030
 Identities = 14/29 (48%), Positives = 21/29 (72%)

Query: 122 RAHKMARPFLEPVDPNDAPDYYGVIKEPV 150
           ++H+ A PF+EPV   +AP YY VI+ P+
Sbjct: 740 KSHQSAWPFMEPVKRTEAPGYYEVIRFPM 768


>gi|47419911 transcriptional intermediary factor 1 alpha isoform a
           [Homo sapiens]
          Length = 1050

 Score = 35.0 bits (79), Expect = 0.030
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 16/90 (17%)

Query: 64  CKWAQEDSSEELYCICRTPAVTSEAELIDEYVCPQCQSTEDVMTVLTPLTEKDDEELKR- 122
           C + ++ S  E+   C  P+  SE +            TE ++  LTP+ ++  E L   
Sbjct: 867 CTFCRDLSKPEVEYDCDAPSHNSEKK-----------KTEGLVK-LTPIDKRKCERLLLF 914

Query: 123 --AHKMARPFLEPVDPNDAPDYYGVIKEPV 150
              H+M+  F +PV P   PDYY +IK P+
Sbjct: 915 LYCHEMSLAFQDPV-PLTVPDYYKIIKNPM 943


>gi|47419909 transcriptional intermediary factor 1 alpha isoform b
           [Homo sapiens]
          Length = 1016

 Score = 35.0 bits (79), Expect = 0.030
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 16/90 (17%)

Query: 64  CKWAQEDSSEELYCICRTPAVTSEAELIDEYVCPQCQSTEDVMTVLTPLTEKDDEELKR- 122
           C + ++ S  E+   C  P+  SE +            TE ++  LTP+ ++  E L   
Sbjct: 833 CTFCRDLSKPEVEYDCDAPSHNSEKK-----------KTEGLVK-LTPIDKRKCERLLLF 880

Query: 123 --AHKMARPFLEPVDPNDAPDYYGVIKEPV 150
              H+M+  F +PV P   PDYY +IK P+
Sbjct: 881 LYCHEMSLAFQDPV-PLTVPDYYKIIKNPM 909


>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
          Length = 1390

 Score = 34.7 bits (78), Expect = 0.040
 Identities = 14/26 (53%), Positives = 19/26 (73%)

Query: 125  KMARPFLEPVDPNDAPDYYGVIKEPV 150
            K  R F +PVDP++ PDY  VIK+P+
Sbjct: 1004 KRFRVFTKPVDPDEVPDYVTVIKQPM 1029


>gi|18034775 PHD finger protein 20 [Homo sapiens]
          Length = 1012

 Score = 34.3 bits (77), Expect = 0.052
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 5/59 (8%)

Query: 6   EDRFKYHAAQNDNYIVIFVVNTSRFYIGCDLCTNWYYGECVGIAEKEA-KKMDVYICND 63
           +DR+ +   +     +  V   + F I C+ C  W +G C+G+ E+   +K   Y+C D
Sbjct: 645 DDRYDFEVVR----CICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQD 699


>gi|74027251 tripartite motif-containing 33 protein isoform beta [Homo
            sapiens]
          Length = 1110

 Score = 33.9 bits (76), Expect = 0.067
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 93   EYVCPQCQSTEDVMTV--LTPLTEKDDEELKR---AHKMARPFLEPVDPNDAPDYYGVIK 147
            EY C   Q ++   T   L+P+ ++  E L      H+++  F EPV P   P+YY +IK
Sbjct: 940  EYDCDNLQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPV-PASIPNYYKIIK 998

Query: 148  EPVGTHELNLKFFQK 162
            +P+    +  K  +K
Sbjct: 999  KPMDLSTVKKKLQKK 1013


>gi|74027249 tripartite motif-containing 33 protein isoform alpha
            [Homo sapiens]
          Length = 1127

 Score = 33.9 bits (76), Expect = 0.067
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 93   EYVCPQCQSTEDVMTV--LTPLTEKDDEELKR---AHKMARPFLEPVDPNDAPDYYGVIK 147
            EY C   Q ++   T   L+P+ ++  E L      H+++  F EPV P   P+YY +IK
Sbjct: 940  EYDCDNLQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPV-PASIPNYYKIIK 998

Query: 148  EPVGTHELNLKFFQK 162
            +P+    +  K  +K
Sbjct: 999  KPMDLSTVKKKLQKK 1013


>gi|34452707 bromodomain containing 8 isoform 2 [Homo sapiens]
          Length = 1235

 Score = 32.7 bits (73), Expect = 0.15
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 123  AHKMARPFLEPVDPNDAPDYYGVIKEPV 150
            +H+ + PFL+PV    AP Y  V+K P+
Sbjct: 1121 SHRFSSPFLKPVSERQAPGYKDVVKRPM 1148



 Score = 29.3 bits (64), Expect = 1.7
 Identities = 10/27 (37%), Positives = 18/27 (66%)

Query: 124 HKMARPFLEPVDPNDAPDYYGVIKEPV 150
           H+ A  FL+PV  + AP Y+ +++ P+
Sbjct: 726 HRYANVFLQPVTDDIAPGYHSIVQRPM 752


>gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens]
          Length = 1544

 Score = 32.3 bits (72), Expect = 0.20
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 31   YIGCD-LCTNWYYGECVGIAEKEAKKMDVYICNDC 64
            ++ CD  C  W++  CVG++ + A+K D YIC  C
Sbjct: 1502 WVQCDGSCNQWFHQVCVGVSPEMAEKED-YICVRC 1535


>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
            sapiens]
          Length = 3969

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 34   CDLCTNWYYGECVG--IAEKEAKKMDVYICNDC 64
            C+ C N Y+ EC+G     K  KK  V+IC  C
Sbjct: 1498 CNKCRNSYHPECLGPNYPTKPTKKKKVWICTKC 1530


>gi|7657218 bromodomain-containing protein 4 isoform short [Homo
           sapiens]
          Length = 722

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 7/50 (14%)

Query: 124 HKMARPFLEPVDPN--DAPDYYGVIKEP--VGTHELNLK---FFQKSQCI 166
           H+ A PF +PVD    + PDYY +IK P  +GT +  L+   ++   +CI
Sbjct: 77  HQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECI 126


>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
           sapiens]
          Length = 1362

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 7/50 (14%)

Query: 124 HKMARPFLEPVDPN--DAPDYYGVIKEP--VGTHELNLK---FFQKSQCI 166
           H+ A PF +PVD    + PDYY +IK P  +GT +  L+   ++   +CI
Sbjct: 77  HQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECI 126


>gi|50345997 E1A binding protein p300 [Homo sapiens]
          Length = 2414

 Score = 31.2 bits (69), Expect = 0.44
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 118  EELKRAHKMARPFLEPVDPN--DAPDYYGVIKEPVGTHELNLK 158
            E L R    + PF +PVDP     PDY+ ++K P+    +  K
Sbjct: 1063 EALYRQDPESLPFRQPVDPQLLGIPDYFDIVKSPMDLSTIKRK 1105


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,930,979
Number of Sequences: 37866
Number of extensions: 316237
Number of successful extensions: 873
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 784
Number of HSP's gapped (non-prelim): 115
length of query: 168
length of database: 18,247,518
effective HSP length: 95
effective length of query: 73
effective length of database: 14,650,248
effective search space: 1069468104
effective search space used: 1069468104
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.