LOC646043 8779

Name: LOC646043	Sequence: fasta or formatted (168aa)		NCBI GI: 169211979
Description: PREDICTED: hypothetical protein		Referenced in: PHD Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 11 2 C cysteine 6.0 10 1 D aspartate 7.1 12 2 E glutamate 10.1 17 2 F phenylalanine 4.8 8 2 G glycine 4.2 7 1 H histidine 1.8 3 1 I isoleucine 6.0 10 1 K lysine 7.1 12 2 L leucine 5.4 9 1 M methionine 2.4 4 1 N asparagine 4.2 7 1 P proline 4.8 8 1 Q glutamine 4.8 8 1 R arginine 3.6 6 1 S serine 3.0 5 2 T threonine 5.4 9 1 V valine 6.0 10 1 W tryptophan 0.6 1 1 Y tyrosine 6.5 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100294340 0.970 PREDICTED: hypothetical protein XP_002344108 BPTF 0.350 bromodomain PHD finger transcription factor isoform ... BPTF 0.350 bromodomain PHD finger transcription factor isoform ... PHF2 0.084 PHD finger protein 2 PHF8 0.078 PHD finger protein 8 JHDM1D 0.072 jumonji C domain containing histone demethylase 1 ho... CXXC1 0.069 CXXC finger 1 (PHD domain) isoform 1 CXXC1 0.069 CXXC finger 1 (PHD domain) isoform 2 PHF3 0.054 PHD finger protein 3 DIDO1 0.054 death inducer-obliterator 1 isoform c DIDO1 0.054 death inducer-obliterator 1 isoform b DIDO1 0.054 death inducer-obliterator 1 isoform a DIDO1 0.054 death inducer-obliterator 1 isoform a CECR2 0.051 cat eye syndrome chromosome region, candidate 2 [Ho... KAT2A 0.042 general control of amino acid synthesis 5-like 2 [H... BRD8 0.033 bromodomain containing 8 isoform 2 TRIM24 0.033 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.033 transcriptional intermediary factor 1 alpha isoform ... KAT2B 0.030 K(lysine) acetyltransferase 2B TRIM33 0.030 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.030 tripartite motif-containing 33 protein isoform alpha... ATAD2 0.030 ATPase family, AAA domain containing 2 TAF3 0.027 RNA polymerase II transcription factor TAFII140 [Ho... PHF20 0.024 PHD finger protein 20 MLL 0.024 myeloid/lymphoid or mixed-lineage leukemia protein [... KIF2C 0.024 kinesin family member 2C KDM5B 0.021 jumonji, AT rich interactive domain 1B KDM5A 0.021 retinoblastoma binding protein 2 isoform 1 BRD4 0.021 bromodomain-containing protein 4 isoform short Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.