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Search of human proteins with 239740825
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239740825 PREDICTED: hypothetical protein XP_002344066 [Homo
sapiens]
(514 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239740825 PREDICTED: hypothetical protein XP_002344066 [Homo ... 919 0.0
gi|239754267 PREDICTED: hypothetical protein [Homo sapiens] 672 0.0
gi|239740672 PREDICTED: hypothetical protein [Homo sapiens] 672 0.0
gi|239513938 PREDICTED: hypothetical protein [Homo sapiens] 672 0.0
gi|239742842 PREDICTED: hypothetical protein XP_002342660 [Homo ... 671 0.0
gi|239740775 PREDICTED: hypothetical protein [Homo sapiens] 670 0.0
gi|239744219 PREDICTED: hypothetical protein XP_002343076 [Homo ... 94 2e-19
gi|239749916 PREDICTED: hypothetical protein XP_002347212 [Homo ... 94 3e-19
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 47 5e-05
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 47 5e-05
gi|24308527 stereocilin [Homo sapiens] 39 0.009
gi|58761535 zinc finger protein 518B [Homo sapiens] 36 0.073
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 35 0.21
gi|46048439 N-acetyltransferase 6 [Homo sapiens] 35 0.21
gi|15559211 RE1-silencing transcription factor [Homo sapiens] 34 0.28
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 34 0.36
gi|82546847 hypothetical protein LOC9907 [Homo sapiens] 31 3.1
gi|33239440 zinc finger protein, Y-linked isoform 1 [Homo sapiens] 30 4.0
gi|223717965 zinc finger protein, Y-linked isoform 2 [Homo sapiens] 30 4.0
gi|221139761 zinc finger protein 853 [Homo sapiens] 30 5.3
gi|239753930 PREDICTED: hypothetical protein [Homo sapiens] 30 5.3
gi|42544121 vacuolar protein sorting 13C protein isoform 1A [Hom... 30 5.3
gi|66348091 vacuolar protein sorting 13C protein isoform 1B [Hom... 30 5.3
gi|66347845 vacuolar protein sorting 13C protein isoform 2B [Hom... 30 5.3
gi|66347828 vacuolar protein sorting 13C protein isoform 2A [Hom... 30 5.3
gi|4885615 signal transducer and activator of transcription 2 [H... 30 6.9
gi|239748472 PREDICTED: hypothetical protein [Homo sapiens] 30 6.9
gi|239742436 PREDICTED: hypothetical protein [Homo sapiens] 30 6.9
gi|55749742 HEAT repeat containing 5B [Homo sapiens] 30 6.9
gi|139394579 zinc finger and BTB domain containing 40 [Homo sapi... 30 6.9
>gi|239740825 PREDICTED: hypothetical protein XP_002344066 [Homo
sapiens]
Length = 514
Score = 919 bits (2376), Expect = 0.0
Identities = 514/514 (100%), Positives = 514/514 (100%)
Query: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS
Sbjct: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
Query: 61 ELVTVLIPLDTVLDSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDS 120
ELVTVLIPLDTVLDSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDS
Sbjct: 61 ELVTVLIPLDTVLDSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDS 120
Query: 121 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDS 180
ELVAVLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDS
Sbjct: 121 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDS 180
Query: 181 ELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLES 240
ELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLES
Sbjct: 181 ELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLES 240
Query: 241 ELVAVLAPLEVVLDSELVAVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAPLEVVLDS 300
ELVAVLAPLEVVLDSELVAVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAPLEVVLDS
Sbjct: 241 ELVAVLAPLEVVLDSELVAVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAPLEVVLDS 300
Query: 301 ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLES 360
ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLES
Sbjct: 301 ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLES 360
Query: 361 ELVAVLAPLESVLDSELVAVLALLDTVLDSELVAVLAPLEVTLDPELVTVLAPLEGVLDS 420
ELVAVLAPLESVLDSELVAVLALLDTVLDSELVAVLAPLEVTLDPELVTVLAPLEGVLDS
Sbjct: 361 ELVAVLAPLESVLDSELVAVLALLDTVLDSELVAVLAPLEVTLDPELVTVLAPLEGVLDS 420
Query: 421 ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 480
ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP
Sbjct: 421 ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 480
Query: 481 EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE 514
EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE
Sbjct: 481 EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE 514
>gi|239754267 PREDICTED: hypothetical protein [Homo sapiens]
Length = 454
Score = 672 bits (1734), Expect = 0.0
Identities = 396/497 (79%), Positives = 415/497 (83%), Gaps = 45/497 (9%)
Query: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTL
Sbjct: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTL----------------- 43
Query: 61 ELVTVLIPLDTVLDSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDS 120
D ELVAVLA LEVVL+SELVAVLAPL+ VLDSELVAVL PLEVVLDS
Sbjct: 44 -------------DPELVAVLAPLEVVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDS 90
Query: 121 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDS 180
E+VAVLAPLDTVLDSELVAVL PLEVVLD ELVAVLAPLE VLDSELV VL PL+ VLDS
Sbjct: 91 EVVAVLAPLDTVLDSELVAVLVPLEVVLDPELVAVLAPLEVVLDSELVAVLAPLEVVLDS 150
Query: 181 ELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLES 240
ELVAV APLEVVLESELVAVLAPLEVVLDSELVAVLAPLE VLDSELV V PL+ VL+S
Sbjct: 151 ELVAVLAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDS 210
Query: 241 ELVAVLAPLEVVLDSELVAVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAPLEVVLDS 300
ELVAV APLEVVLDSELVAV APL+ VL+SELVAVLAPLEVVLDSELVAVPAPLEVVLDS
Sbjct: 211 ELVAVPAPLEVVLDSELVAVPAPLEGVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLDS 270
Query: 301 ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLES 360
ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLA LEVVLES
Sbjct: 271 ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLASLEVVLES 330
Query: 361 ELVAVLAPLESVLDSELVAVLALLDTVLDSELVAVLAPLEVTLDPELVTVLAPLEGVLDS 420
ELVAVLAPLE VL+SELVAVLA L+ VLDSELVAVLAPLEV LD ELV +L PL+ VL+S
Sbjct: 331 ELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAVLAPLEVVLDSELVAMLIPLDAVLNS 390
Query: 421 ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 480
ELVAVL PLEVV +SELV ML PL+ L+ E+VAV LTPLEVTLDP
Sbjct: 391 ELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAV---------------LTPLEVTLDP 435
Query: 481 EMVAVLTPLEVTLDPEL 497
E+VAVL PLE+TLDP L
Sbjct: 436 ELVAVLAPLEITLDPVL 452
Score = 667 bits (1721), Expect = 0.0
Identities = 386/440 (87%), Positives = 401/440 (91%)
Query: 75 SELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDSELVAVLAPLDTVLD 134
+ L AV A EVV AV P EV LD ELVAVL PLEVVLDSELVAVLAPLDTVLD
Sbjct: 15 ASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDSELVAVLAPLDTVLD 74
Query: 135 SELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLE 194
SELVAVLAPLEVVLDSE+VAVLAPL+ VLDSELV VL+PL+ VLD ELVAV APLEVVL+
Sbjct: 75 SELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDPELVAVLAPLEVVLD 134
Query: 195 SELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLESELVAVLAPLEVVLD 254
SELVAVLAPLEVVLDSELVAVLAPLEVVL+SELVAV APLEVVL+SELVAVLAPLE VLD
Sbjct: 135 SELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEGVLD 194
Query: 255 SELVAVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLD 314
SELV VL PLDTVL+SELVAV APLEVVLDSELVAVPAPLE VLDSELVAVLAPLEVVLD
Sbjct: 195 SELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDSELVAVLAPLEVVLD 254
Query: 315 SELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLESVLD 374
SELVAV A L+ VLDSELVAVLAPLEVVLDSELVAVLA L+ VL+SELVAVLAPLE VLD
Sbjct: 255 SELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLD 314
Query: 375 SELVAVLALLDTVLDSELVAVLAPLEVTLDPELVTVLAPLEGVLDSELVAVLAPLEVVLD 434
SELVAVLA L+ VL+SELVAVLAPLEV L+ ELV VLAPLEGVLDSELVAVLAPLEVVLD
Sbjct: 315 SELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAVLAPLEVVLD 374
Query: 435 SELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLD 494
SELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLD
Sbjct: 375 SELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLD 434
Query: 495 PELVAVLAPLEITLDPVLAE 514
PELVAVLAPLEITLDPVLAE
Sbjct: 435 PELVAVLAPLEITLDPVLAE 454
>gi|239740672 PREDICTED: hypothetical protein [Homo sapiens]
Length = 454
Score = 672 bits (1734), Expect = 0.0
Identities = 396/497 (79%), Positives = 415/497 (83%), Gaps = 45/497 (9%)
Query: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTL
Sbjct: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTL----------------- 43
Query: 61 ELVTVLIPLDTVLDSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDS 120
D ELVAVLA LEVVL+SELVAVLAPL+ VLDSELVAVL PLEVVLDS
Sbjct: 44 -------------DPELVAVLAPLEVVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDS 90
Query: 121 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDS 180
E+VAVLAPLDTVLDSELVAVL PLEVVLD ELVAVLAPLE VLDSELV VL PL+ VLDS
Sbjct: 91 EVVAVLAPLDTVLDSELVAVLVPLEVVLDPELVAVLAPLEVVLDSELVAVLAPLEVVLDS 150
Query: 181 ELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLES 240
ELVAV APLEVVLESELVAVLAPLEVVLDSELVAVLAPLE VLDSELV V PL+ VL+S
Sbjct: 151 ELVAVLAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDS 210
Query: 241 ELVAVLAPLEVVLDSELVAVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAPLEVVLDS 300
ELVAV APLEVVLDSELVAV APL+ VL+SELVAVLAPLEVVLDSELVAVPAPLEVVLDS
Sbjct: 211 ELVAVPAPLEVVLDSELVAVPAPLEGVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLDS 270
Query: 301 ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLES 360
ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLA LEVVLES
Sbjct: 271 ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLASLEVVLES 330
Query: 361 ELVAVLAPLESVLDSELVAVLALLDTVLDSELVAVLAPLEVTLDPELVTVLAPLEGVLDS 420
ELVAVLAPLE VL+SELVAVLA L+ VLDSELVAVLAPLEV LD ELV +L PL+ VL+S
Sbjct: 331 ELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAVLAPLEVVLDSELVAMLIPLDAVLNS 390
Query: 421 ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 480
ELVAVL PLEVV +SELV ML PL+ L+ E+VAV LTPLEVTLDP
Sbjct: 391 ELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAV---------------LTPLEVTLDP 435
Query: 481 EMVAVLTPLEVTLDPEL 497
E+VAVL PLE+TLDP L
Sbjct: 436 ELVAVLAPLEITLDPVL 452
Score = 667 bits (1721), Expect = 0.0
Identities = 386/440 (87%), Positives = 401/440 (91%)
Query: 75 SELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDSELVAVLAPLDTVLD 134
+ L AV A EVV AV P EV LD ELVAVL PLEVVLDSELVAVLAPLDTVLD
Sbjct: 15 ASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDSELVAVLAPLDTVLD 74
Query: 135 SELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLE 194
SELVAVLAPLEVVLDSE+VAVLAPL+ VLDSELV VL+PL+ VLD ELVAV APLEVVL+
Sbjct: 75 SELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDPELVAVLAPLEVVLD 134
Query: 195 SELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLESELVAVLAPLEVVLD 254
SELVAVLAPLEVVLDSELVAVLAPLEVVL+SELVAV APLEVVL+SELVAVLAPLE VLD
Sbjct: 135 SELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEGVLD 194
Query: 255 SELVAVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLD 314
SELV VL PLDTVL+SELVAV APLEVVLDSELVAVPAPLE VLDSELVAVLAPLEVVLD
Sbjct: 195 SELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDSELVAVLAPLEVVLD 254
Query: 315 SELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLESVLD 374
SELVAV A L+ VLDSELVAVLAPLEVVLDSELVAVLA L+ VL+SELVAVLAPLE VLD
Sbjct: 255 SELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLD 314
Query: 375 SELVAVLALLDTVLDSELVAVLAPLEVTLDPELVTVLAPLEGVLDSELVAVLAPLEVVLD 434
SELVAVLA L+ VL+SELVAVLAPLEV L+ ELV VLAPLEGVLDSELVAVLAPLEVVLD
Sbjct: 315 SELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAVLAPLEVVLD 374
Query: 435 SELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLD 494
SELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLD
Sbjct: 375 SELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLD 434
Query: 495 PELVAVLAPLEITLDPVLAE 514
PELVAVLAPLEITLDPVLAE
Sbjct: 435 PELVAVLAPLEITLDPVLAE 454
>gi|239513938 PREDICTED: hypothetical protein [Homo sapiens]
Length = 454
Score = 672 bits (1734), Expect = 0.0
Identities = 396/497 (79%), Positives = 415/497 (83%), Gaps = 45/497 (9%)
Query: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTL
Sbjct: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTL----------------- 43
Query: 61 ELVTVLIPLDTVLDSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDS 120
D ELVAVLA LEVVL+SELVAVLAPL+ VLDSELVAVL PLEVVLDS
Sbjct: 44 -------------DPELVAVLAPLEVVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDS 90
Query: 121 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDS 180
E+VAVLAPLDTVLDSELVAVL PLEVVLD ELVAVLAPLE VLDSELV VL PL+ VLDS
Sbjct: 91 EVVAVLAPLDTVLDSELVAVLVPLEVVLDPELVAVLAPLEVVLDSELVAVLAPLEVVLDS 150
Query: 181 ELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLES 240
ELVAV APLEVVLESELVAVLAPLEVVLDSELVAVLAPLE VLDSELV V PL+ VL+S
Sbjct: 151 ELVAVLAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDS 210
Query: 241 ELVAVLAPLEVVLDSELVAVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAPLEVVLDS 300
ELVAV APLEVVLDSELVAV APL+ VL+SELVAVLAPLEVVLDSELVAVPAPLEVVLDS
Sbjct: 211 ELVAVPAPLEVVLDSELVAVPAPLEGVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLDS 270
Query: 301 ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLES 360
ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLA LEVVLES
Sbjct: 271 ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLASLEVVLES 330
Query: 361 ELVAVLAPLESVLDSELVAVLALLDTVLDSELVAVLAPLEVTLDPELVTVLAPLEGVLDS 420
ELVAVLAPLE VL+SELVAVLA L+ VLDSELVAVLAPLEV LD ELV +L PL+ VL+S
Sbjct: 331 ELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAVLAPLEVVLDSELVAMLIPLDAVLNS 390
Query: 421 ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 480
ELVAVL PLEVV +SELV ML PL+ L+ E+VAV LTPLEVTLDP
Sbjct: 391 ELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAV---------------LTPLEVTLDP 435
Query: 481 EMVAVLTPLEVTLDPEL 497
E+VAVL PLE+TLDP L
Sbjct: 436 ELVAVLAPLEITLDPVL 452
Score = 667 bits (1721), Expect = 0.0
Identities = 386/440 (87%), Positives = 401/440 (91%)
Query: 75 SELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDSELVAVLAPLDTVLD 134
+ L AV A EVV AV P EV LD ELVAVL PLEVVLDSELVAVLAPLDTVLD
Sbjct: 15 ASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDSELVAVLAPLDTVLD 74
Query: 135 SELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLE 194
SELVAVLAPLEVVLDSE+VAVLAPL+ VLDSELV VL+PL+ VLD ELVAV APLEVVL+
Sbjct: 75 SELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDPELVAVLAPLEVVLD 134
Query: 195 SELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLESELVAVLAPLEVVLD 254
SELVAVLAPLEVVLDSELVAVLAPLEVVL+SELVAV APLEVVL+SELVAVLAPLE VLD
Sbjct: 135 SELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEGVLD 194
Query: 255 SELVAVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLD 314
SELV VL PLDTVL+SELVAV APLEVVLDSELVAVPAPLE VLDSELVAVLAPLEVVLD
Sbjct: 195 SELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDSELVAVLAPLEVVLD 254
Query: 315 SELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLESVLD 374
SELVAV A L+ VLDSELVAVLAPLEVVLDSELVAVLA L+ VL+SELVAVLAPLE VLD
Sbjct: 255 SELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLD 314
Query: 375 SELVAVLALLDTVLDSELVAVLAPLEVTLDPELVTVLAPLEGVLDSELVAVLAPLEVVLD 434
SELVAVLA L+ VL+SELVAVLAPLEV L+ ELV VLAPLEGVLDSELVAVLAPLEVVLD
Sbjct: 315 SELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAVLAPLEVVLD 374
Query: 435 SELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLD 494
SELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLD
Sbjct: 375 SELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLD 434
Query: 495 PELVAVLAPLEITLDPVLAE 514
PELVAVLAPLEITLDPVLAE
Sbjct: 435 PELVAVLAPLEITLDPVLAE 454
>gi|239742842 PREDICTED: hypothetical protein XP_002342660 [Homo
sapiens]
Length = 454
Score = 671 bits (1732), Expect = 0.0
Identities = 396/497 (79%), Positives = 415/497 (83%), Gaps = 45/497 (9%)
Query: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTL
Sbjct: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTL----------------- 43
Query: 61 ELVTVLIPLDTVLDSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDS 120
D ELVAVLA LEVVL+SELVAVLAPL+ VLDSELVAVL PLEVVLDS
Sbjct: 44 -------------DPELVAVLAPLEVVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDS 90
Query: 121 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDS 180
E+VAVLAPLDTVLDSELVAVL PLEVVLD ELVAVLAPLE VLDSELV VL PL+ VLDS
Sbjct: 91 EVVAVLAPLDTVLDSELVAVLVPLEVVLDPELVAVLAPLEVVLDSELVAVLAPLEVVLDS 150
Query: 181 ELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLES 240
ELVAV APLEVVLESELVAVLAPLEVVLDSELVAVLAPLE VLDSELV V PL+ VL+S
Sbjct: 151 ELVAVLAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDS 210
Query: 241 ELVAVLAPLEVVLDSELVAVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAPLEVVLDS 300
ELVAV APLEVVLDSELVAV APL+ VL+SELVAVLAPLEVVLDSELVAVPAPLEVVLDS
Sbjct: 211 ELVAVPAPLEVVLDSELVAVPAPLEGVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLDS 270
Query: 301 ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLES 360
ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLA LEVVLES
Sbjct: 271 ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLASLEVVLES 330
Query: 361 ELVAVLAPLESVLDSELVAVLALLDTVLDSELVAVLAPLEVTLDPELVTVLAPLEGVLDS 420
ELVAVLAPLE VL+SELVAVLA L+ VLDSELVAVLAPLEV LD ELV +L PL+ VL+S
Sbjct: 331 ELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAVLAPLEVVLDSELVAMLIPLDTVLNS 390
Query: 421 ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 480
ELVAVL PLEVV +SELV ML PL+ L+ E+VAV LTPLEVTLDP
Sbjct: 391 ELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAV---------------LTPLEVTLDP 435
Query: 481 EMVAVLTPLEVTLDPEL 497
E+VAVL PLE+TLDP L
Sbjct: 436 ELVAVLAPLEITLDPVL 452
Score = 665 bits (1717), Expect = 0.0
Identities = 385/440 (87%), Positives = 400/440 (90%)
Query: 75 SELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDSELVAVLAPLDTVLD 134
+ L AV A EVV AV P EV LD ELVAVL PLEVVLDSELVAVLAPLDTVLD
Sbjct: 15 ASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDSELVAVLAPLDTVLD 74
Query: 135 SELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLE 194
SELVAVLAPLEVVLDSE+VAVLAPL+ VLDSELV VL+PL+ VLD ELVAV APLEVVL+
Sbjct: 75 SELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDPELVAVLAPLEVVLD 134
Query: 195 SELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLESELVAVLAPLEVVLD 254
SELVAVLAPLEVVLDSELVAVLAPLEVVL+SELVAV APLEVVL+SELVAVLAPLE VLD
Sbjct: 135 SELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEGVLD 194
Query: 255 SELVAVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLD 314
SELV VL PLDTVL+SELVAV APLEVVLDSELVAVPAPLE VLDSELVAVLAPLEVVLD
Sbjct: 195 SELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDSELVAVLAPLEVVLD 254
Query: 315 SELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLESVLD 374
SELVAV A L+ VLDSELVAVLAPLEVVLDSELVAVLA L+ VL+SELVAVLAPLE VLD
Sbjct: 255 SELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLD 314
Query: 375 SELVAVLALLDTVLDSELVAVLAPLEVTLDPELVTVLAPLEGVLDSELVAVLAPLEVVLD 434
SELVAVLA L+ VL+SELVAVLAPLEV L+ ELV VLAPLEGVLDSELVAVLAPLEVVLD
Sbjct: 315 SELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAVLAPLEVVLD 374
Query: 435 SELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLD 494
SELVAMLIPLD VLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLD
Sbjct: 375 SELVAMLIPLDTVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLD 434
Query: 495 PELVAVLAPLEITLDPVLAE 514
PELVAVLAPLEITLDPVLAE
Sbjct: 435 PELVAVLAPLEITLDPVLAE 454
>gi|239740775 PREDICTED: hypothetical protein [Homo sapiens]
Length = 454
Score = 670 bits (1728), Expect = 0.0
Identities = 395/497 (79%), Positives = 414/497 (83%), Gaps = 45/497 (9%)
Query: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTL
Sbjct: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTL----------------- 43
Query: 61 ELVTVLIPLDTVLDSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDS 120
D ELVAVLA LEVVL+SELVAVLAPL+ VLDSELVAVL PLEVVLDS
Sbjct: 44 -------------DPELVAVLAPLEVVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDS 90
Query: 121 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDS 180
E+VAVLAPLDTVLDSELVAVL PLEVVLD ELVAVLAPLE VLDSELV VL PL+ VLDS
Sbjct: 91 EVVAVLAPLDTVLDSELVAVLVPLEVVLDPELVAVLAPLEVVLDSELVAVLAPLEVVLDS 150
Query: 181 ELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLES 240
ELVAV APLEVVLESELVAVLAPLEVVLDSELVAVLAPLE VLDSELV V PL+ VL+S
Sbjct: 151 ELVAVLAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDS 210
Query: 241 ELVAVLAPLEVVLDSELVAVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAPLEVVLDS 300
ELVAV APLEVVLDSELVAV APL+ VL+SELVAVLAPLEVVLDSELVAVPAPLEVVLDS
Sbjct: 211 ELVAVPAPLEVVLDSELVAVPAPLEGVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLDS 270
Query: 301 ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLES 360
ELVAVLAPLEVVLDSELVAVLALLDTVLDSELV VLAPLEVVLDSELVAVLA LEVVLES
Sbjct: 271 ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVTVLAPLEVVLDSELVAVLASLEVVLES 330
Query: 361 ELVAVLAPLESVLDSELVAVLALLDTVLDSELVAVLAPLEVTLDPELVTVLAPLEGVLDS 420
ELVAVLAPLE VL+SELVAVLA L+ VLDSELVAVLAPLEV LD ELV +L PL+ VL+S
Sbjct: 331 ELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAVLAPLEVVLDSELVAMLIPLDTVLNS 390
Query: 421 ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 480
ELVAVL PLEVV +SELV ML PL+ L+ E+VAV LTPLEVTLDP
Sbjct: 391 ELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAV---------------LTPLEVTLDP 435
Query: 481 EMVAVLTPLEVTLDPEL 497
E+VAVL PLE+TLDP L
Sbjct: 436 ELVAVLAPLEITLDPVL 452
Score = 664 bits (1713), Expect = 0.0
Identities = 384/440 (87%), Positives = 399/440 (90%)
Query: 75 SELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDSELVAVLAPLDTVLD 134
+ L AV A EVV AV P EV LD ELVAVL PLEVVLDSELVAVLAPLDTVLD
Sbjct: 15 ASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDSELVAVLAPLDTVLD 74
Query: 135 SELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLE 194
SELVAVLAPLEVVLDSE+VAVLAPL+ VLDSELV VL+PL+ VLD ELVAV APLEVVL+
Sbjct: 75 SELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDPELVAVLAPLEVVLD 134
Query: 195 SELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLESELVAVLAPLEVVLD 254
SELVAVLAPLEVVLDSELVAVLAPLEVVL+SELVAV APLEVVL+SELVAVLAPLE VLD
Sbjct: 135 SELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEGVLD 194
Query: 255 SELVAVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLD 314
SELV VL PLDTVL+SELVAV APLEVVLDSELVAVPAPLE VLDSELVAVLAPLEVVLD
Sbjct: 195 SELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDSELVAVLAPLEVVLD 254
Query: 315 SELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLESVLD 374
SELVAV A L+ VLDSELVAVLAPLEVVLDSELVAVLA L+ VL+SELV VLAPLE VLD
Sbjct: 255 SELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVTVLAPLEVVLD 314
Query: 375 SELVAVLALLDTVLDSELVAVLAPLEVTLDPELVTVLAPLEGVLDSELVAVLAPLEVVLD 434
SELVAVLA L+ VL+SELVAVLAPLEV L+ ELV VLAPLEGVLDSELVAVLAPLEVVLD
Sbjct: 315 SELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAVLAPLEVVLD 374
Query: 435 SELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLD 494
SELVAMLIPLD VLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLD
Sbjct: 375 SELVAMLIPLDTVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLD 434
Query: 495 PELVAVLAPLEITLDPVLAE 514
PELVAVLAPLEITLDPVLAE
Sbjct: 435 PELVAVLAPLEITLDPVLAE 454
>gi|239744219 PREDICTED: hypothetical protein XP_002343076 [Homo
sapiens]
Length = 398
Score = 94.4 bits (233), Expect = 2e-19
Identities = 121/374 (32%), Positives = 191/374 (51%), Gaps = 44/374 (11%)
Query: 162 VLDSELVTVLIPLDTVLDSELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEV 221
++ S L + L V+ S +V + + VV+ + LV V+ L VV+ S +A+ A L V
Sbjct: 1 MVTSSLTVAITSLVVVITSLVVIITS--FVVVTTSLVVVITSLVVVITSIAIAI-ATLVV 57
Query: 222 VLDSELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLDTVLESELVAVLAPLEV 281
VL +V + + VV+ + LV V+ P V+ S L V+ L ++ LV V+ L V
Sbjct: 58 VLTFTVVVLTSL--VVVTTSLVMVITPPFAVITS-LGVVITSLVVIITC-LVLVITALGV 113
Query: 282 VLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEV 341
V+ S V V + + V+ + LVAV+ PL VV+ S LV V+ L V+ S V + + + V
Sbjct: 114 VITSLGVVVTSLVMVI--TPLVAVITPLGVVITS-LVVVITSLVMVITSLTVVITSSIVV 170
Query: 342 VLDSELVAVLAPLEVVLESELVAVLAPLESVL------DSELVAVLALLDT--------- 386
+ + LV V+ L V++ S L V+ PL V+ ++ LV VL L
Sbjct: 171 I--TPLVMVITSLTVIITS-LFVVITPLVMVITFLIVVNTSLVVVLITLIVSPPPSLWLS 227
Query: 387 --------VLDSELVAVLAPLEVTLDPELVTVLAPLEGVLDSELVAVLAPLEVVLDSELV 438
V+ LV V+ L V + +V ++A + V+ L+ V++ L VV+ S LV
Sbjct: 228 APCITSLFVVIIPLVVVITSLIVVITSLVVVLIAVI--VVTPSLIVVISSLVVVIAS-LV 284
Query: 439 AMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLDPELV 498
+ I L V++S L+ V+ L VV S LV ++T L V + +V V+T L V + L+
Sbjct: 285 VVFISLIVVISS-LIVVITSLVVVITS-LVVVITSLIVVI-TSLVVVITSLVVVI-TSLI 340
Query: 499 AVLAPLEITLDPVL 512
V+ PL TL P L
Sbjct: 341 VVIIPLS-TLPPPL 353
Score = 94.0 bits (232), Expect = 3e-19
Identities = 99/270 (36%), Positives = 149/270 (55%), Gaps = 23/270 (8%)
Query: 56 VVLDSELVTVLIPLDTVLDSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLE 115
VV+ + LV V+ L V+ S L V+ SL +V+ + LVAV+ PL VV+ S LV V+T L
Sbjct: 98 VVIITCLVLVITALGVVITS-LGVVVTSLVMVI-TPLVAVITPLGVVITS-LVVVITSLV 154
Query: 116 VVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLD 175
+V+ S V + + + V+ + LV V+ L V++ S L V+ PL V+ + L+ V L
Sbjct: 155 MVITSLTVVITSSI--VVITPLVMVITSLTVIITS-LFVVITPLVMVI-TFLIVVNTSLV 210
Query: 176 TVLDSELVAVPAP--LEVVLESELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVPAP 233
VL + +V+ P L + L V+ PL VV+ S L+ V+ L VVL + +V P+
Sbjct: 211 VVLITLIVSPPPSLWLSAPCITSLFVVIIPLVVVITS-LIVVITSLVVVLIAVIVVTPSL 269
Query: 234 LEVVLESELVAVLAPLEVVLDSELVAVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAP 293
+ V+ S LV V+A L VV S +V + S L+ V+ L VV+ S LV V
Sbjct: 270 IVVI--SSLVVVIASLVVVFISLIVVI---------SSLIVVITSLVVVITS-LVVVITS 317
Query: 294 LEVVLDSELVAVLAPLEVVLDSELVAVLAL 323
L VV+ S LV V+ L VV+ S +V ++ L
Sbjct: 318 LIVVITS-LVVVITSLVVVITSLIVVIIPL 346
Score = 84.0 bits (206), Expect = 3e-16
Identities = 82/247 (33%), Positives = 132/247 (53%), Gaps = 24/247 (9%)
Query: 47 LVAVLAPLEVVLDSELVTVLIPLDTVLDSELVAVLASLEVVLESELVAVLAPLEVVLDSE 106
LVAV+ PL VV+ S +V + + LV V+ SL VV+ S +V V+ PL +V+ S
Sbjct: 132 LVAVITPLGVVITSLVVVI---------TSLVMVITSLTVVITSSIV-VITPLVMVITS- 180
Query: 107 LVAVLTPLEVVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSE 166
L ++T L VV+ + LV V+ L V+++ LV VL L V L L +
Sbjct: 181 LTVIITSLFVVI-TPLVMVITFL-IVVNTSLVVVLITLIVSPPPSLW-----LSAPCITS 233
Query: 167 LVTVLIPLDTVLDSELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEVVLDSE 226
L V+IPL V+ S +V + + + V++ V V+ P +V+ S LV V+A L VV S
Sbjct: 234 LFVVIIPLVVVITSLIVVITSLVVVLI---AVIVVTPSLIVVISSLVVVIASLVVVFISL 290
Query: 227 LVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLDTVLESELVAVLAPLEVVLDSE 286
+V + + + V+ + LV V+ L VV+ S L+ V+ L V+ S +V + + + V++
Sbjct: 291 IVVISSLIVVI--TSLVVVITSLVVVITS-LIVVITSLVVVITSLVVVITSLIVVIIPLS 347
Query: 287 LVAVPAP 293
+ P P
Sbjct: 348 TLPPPLP 354
>gi|239749916 PREDICTED: hypothetical protein XP_002347212 [Homo
sapiens]
Length = 391
Score = 94.0 bits (232), Expect = 3e-19
Identities = 99/270 (36%), Positives = 149/270 (55%), Gaps = 23/270 (8%)
Query: 56 VVLDSELVTVLIPLDTVLDSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLE 115
VV+ + LV V+ L V+ S L V+ SL +V+ + LVAV+ PL VV+ S LV V+T L
Sbjct: 91 VVIITCLVLVITALGVVITS-LGVVVTSLVMVI-TPLVAVITPLGVVITS-LVVVITSLV 147
Query: 116 VVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLD 175
+V+ S V + + + V+ + LV V+ L V++ S L V+ PL V+ + L+ V L
Sbjct: 148 MVITSLTVVITSSI--VVITPLVMVITSLTVIITS-LFVVITPLVMVI-TFLIVVNTSLV 203
Query: 176 TVLDSELVAVPAP--LEVVLESELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVPAP 233
VL + +V+ P L + L V+ PL VV+ S L+ V+ L VVL + +V P+
Sbjct: 204 VVLITLIVSPPPSLWLSAPCITSLFVVIIPLVVVITS-LIVVITSLVVVLIAVIVVTPSL 262
Query: 234 LEVVLESELVAVLAPLEVVLDSELVAVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAP 293
+ V+ S LV V+A L VV S +V + S L+ V+ L VV+ S LV V
Sbjct: 263 IVVI--SSLVVVIASLVVVFISLIVVI---------SSLIVVITSLVVVITS-LVVVITS 310
Query: 294 LEVVLDSELVAVLAPLEVVLDSELVAVLAL 323
L VV+ S LV V+ L VV+ S +V ++ L
Sbjct: 311 LIVVITS-LVVVITSLVVVITSLIVVIIPL 339
Score = 93.6 bits (231), Expect = 4e-19
Identities = 122/374 (32%), Positives = 188/374 (50%), Gaps = 51/374 (13%)
Query: 162 VLDSELVTVLIPLDTVLDSELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEV 221
++ S L + L V+ S +V + + VV+ + LV V+ L VV+ S +A+ A L V
Sbjct: 1 MVTSSLTVAITSLVVVITSLVVIITS--FVVVTTSLVVVITSLVVVITSIAIAI-ATLVV 57
Query: 222 VLDSELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLDTVLESELVAVLAPLEV 281
VL S LV V L +V+ AV+ L VV+ S +V + LV V+ L V
Sbjct: 58 VLTS-LVVVTTSLVMVITPPF-AVITSLGVVITSLVVIITC---------LVLVITALGV 106
Query: 282 VLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEV 341
V+ S V V + + V+ + LVAV+ PL VV+ S LV V+ L V+ S V + + + V
Sbjct: 107 VITSLGVVVTSLVMVI--TPLVAVITPLGVVITS-LVVVITSLVMVITSLTVVITSSIVV 163
Query: 342 VLDSELVAVLAPLEVVLESELVAVLAPLESVL------DSELVAVLALLDT--------- 386
+ + LV V+ L V++ S L V+ PL V+ ++ LV VL L
Sbjct: 164 I--TPLVMVITSLTVIITS-LFVVITPLVMVITFLIVVNTSLVVVLITLIVSPPPSLWLS 220
Query: 387 --------VLDSELVAVLAPLEVTLDPELVTVLAPLEGVLDSELVAVLAPLEVVLDSELV 438
V+ LV V+ L V + +V ++A + V+ L+ V++ L VV+ S LV
Sbjct: 221 APCITSLFVVIIPLVVVITSLIVVITSLVVVLIAVI--VVTPSLIVVISSLVVVIAS-LV 277
Query: 439 AMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLDPELV 498
+ I L V++S L+ V+ L VV S LV ++T L V + +V V+T L V + L+
Sbjct: 278 VVFISLIVVISS-LIVVITSLVVVITS-LVVVITSLIVVI-TSLVVVITSLVVVI-TSLI 333
Query: 499 AVLAPLEITLDPVL 512
V+ PL TL P L
Sbjct: 334 VVIIPLS-TLPPPL 346
Score = 84.0 bits (206), Expect = 3e-16
Identities = 82/247 (33%), Positives = 132/247 (53%), Gaps = 24/247 (9%)
Query: 47 LVAVLAPLEVVLDSELVTVLIPLDTVLDSELVAVLASLEVVLESELVAVLAPLEVVLDSE 106
LVAV+ PL VV+ S +V + + LV V+ SL VV+ S +V V+ PL +V+ S
Sbjct: 125 LVAVITPLGVVITSLVVVI---------TSLVMVITSLTVVITSSIV-VITPLVMVITS- 173
Query: 107 LVAVLTPLEVVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSE 166
L ++T L VV+ + LV V+ L V+++ LV VL L V L L +
Sbjct: 174 LTVIITSLFVVI-TPLVMVITFL-IVVNTSLVVVLITLIVSPPPSLW-----LSAPCITS 226
Query: 167 LVTVLIPLDTVLDSELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEVVLDSE 226
L V+IPL V+ S +V + + + V++ V V+ P +V+ S LV V+A L VV S
Sbjct: 227 LFVVIIPLVVVITSLIVVITSLVVVLI---AVIVVTPSLIVVISSLVVVIASLVVVFISL 283
Query: 227 LVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLDTVLESELVAVLAPLEVVLDSE 286
+V + + + V+ + LV V+ L VV+ S L+ V+ L V+ S +V + + + V++
Sbjct: 284 IVVISSLIVVI--TSLVVVITSLVVVITS-LIVVITSLVVVITSLVVVITSLIVVIIPLS 340
Query: 287 LVAVPAP 293
+ P P
Sbjct: 341 TLPPPLP 347
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 46.6 bits (109), Expect = 5e-05
Identities = 77/290 (26%), Positives = 120/290 (41%), Gaps = 28/290 (9%)
Query: 38 PAEVTLDPELVAVLAPLEVVLDSELVTV-LIPLDTVLDSELVAVLASLEVVL------ES 90
P EV P +V P V SE+ +P D + + +VL S V E
Sbjct: 1196 PTEVPSSPSEESVSQPEPPVSQSEISEPSAVPTDYSVSASDPSVLVSEAAVTVPEPPPEP 1255
Query: 91 ELVAVLAPLEVVLDSELVAVLTPLEVVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDS 150
E L P+E + +E V+ V ++ TVL SE V++ DS
Sbjct: 1256 ESSITLTPVESAVVAEEHEVVPERPVTCMVSETPAMSAEPTVLASE-PPVMSETAETFDS 1314
Query: 151 ELVA--VLAPLEGVLDSELVTVLIPLDTVLDSELVAVP-----APLE----VVLESELVA 199
+ V + + L VT + +++L+ +A P A LE VLES V
Sbjct: 1315 MRASGHVASEVSTSLLVPAVTTPVLAESILEPPAMAAPESSAMAVLESSAVTVLESSTVT 1374
Query: 200 VLAPLEV-VLDSELVAVLAPLEVVLDSELVAVPAPLEVVLESELVAVLAPLEVVLDSELV 258
VL V VL+ +V V P VV + + V +P P+ LE V VL P VL ++
Sbjct: 1375 VLESSTVTVLEPSVVTVPEP-PVVAEPDYVTIPVPVVSALEPS-VPVLEPAVSVLQPSMI 1432
Query: 259 ----AVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVA 304
+V TV SE ++ V+ +E+ P+ +L+S +++
Sbjct: 1433 VSEPSVSVQESTVTVSEPAVTVSEQTQVIPTEVAIESTPM--ILESSIMS 1480
Score = 40.0 bits (92), Expect = 0.005
Identities = 74/242 (30%), Positives = 100/242 (41%), Gaps = 26/242 (10%)
Query: 218 PLEVVLDSELVAVPAPLEVVLESEL---------VAVLAPLEVVLDSELVAVLAPLDTVL 268
P EV +V P V +SE+ +V A VL SE AV P +
Sbjct: 1196 PTEVPSSPSEESVSQPEPPVSQSEISEPSAVPTDYSVSASDPSVLVSE-AAVTVP-EPPP 1253
Query: 269 ESELVAVLAPLE-VVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTV 327
E E L P+E V+ E VP + SE A+ A VL SE + +T
Sbjct: 1254 EPESSITLTPVESAVVAEEHEVVPERPVTCMVSETPAMSAE-PTVLASEPPVMSETAET- 1311
Query: 328 LDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLES---VLDSELVAVL-AL 383
DS + EV + AV P+ E A+ AP S VL+S V VL +
Sbjct: 1312 FDSMRASGHVASEVSTSLLVPAVTTPVLAESILEPPAMAAPESSAMAVLESSAVTVLESS 1371
Query: 384 LDTVLDSELVAVLAPLEVTL-------DPELVTVLAPLEGVLDSELVAVLAPLEVVLDSE 436
TVL+S V VL P VT+ +P+ VT+ P+ L+ V VL P VL
Sbjct: 1372 TVTVLESSTVTVLEPSVVTVPEPPVVAEPDYVTIPVPVVSALEPS-VPVLEPAVSVLQPS 1430
Query: 437 LV 438
++
Sbjct: 1431 MI 1432
Score = 37.0 bits (84), Expect = 0.043
Identities = 90/293 (30%), Positives = 117/293 (39%), Gaps = 25/293 (8%)
Query: 231 PAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLDTVLESELVAVLA----PLEVVLDSE 286
P P E E + L P E + L P L +E A+ A P EV
Sbjct: 1148 PLPPE---EPPTMPPLPPEEPPMTPPLPPEEPPEGPALPTEQSALTAENTWPTEVPSSPS 1204
Query: 287 LVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSE 346
+V P V SE + P V D +V A +VL SE AV P E + E
Sbjct: 1205 EESVSQPEPPVSQSE---ISEPSAVPTD---YSVSASDPSVLVSE-AAVTVP-EPPPEPE 1256
Query: 347 LVAVLAPLE--VVLESELVAVLAPLESVLDSELVAVLALLDTVLDSELVAVLAPLEVTLD 404
L P+E VV E V P+ ++ SE A+ A TVL SE V++ T D
Sbjct: 1257 SSITLTPVESAVVAEEHEVVPERPVTCMV-SETPAMSAE-PTVLASE-PPVMSETAETFD 1313
Query: 405 PELVTVLAPLEGVLDSELVAVLAPLEVVLDSELVAMLIPLD---AVLNSELVAVLIPLEV 461
+ E + AV P+ E AM P AVL S V VL V
Sbjct: 1314 SMRASGHVASEVSTSLLVPAVTTPVLAESILEPPAMAAPESSAMAVLESSAVTVLESSTV 1373
Query: 462 -VWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLDPELVAVLAPLEITLDPVLA 513
V S VT+L P VT+ PE V P VT+ +V+ L P L+P ++
Sbjct: 1374 TVLESSTVTVLEPSVVTV-PEPPVVAEPDYVTIPVPVVSALEPSVPVLEPAVS 1425
Score = 30.0 bits (66), Expect = 5.3
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 26 VVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDSELVTVLIPLDTVLDSELVAVLASLE 85
VV +P V EP VT+ +V+ L P VL+ V+VL P ++ V+V S
Sbjct: 1388 VVTVPEPPVVAEPDYVTIPVPVVSALEPSVPVLE-PAVSVLQP-SMIVSEPSVSVQES-- 1443
Query: 86 VVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDSELVA 124
V SE ++ V+ +E+ TP+ +L+S +++
Sbjct: 1444 TVTVSEPAVTVSEQTQVIPTEVAIESTPM--ILESSIMS 1480
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 46.6 bits (109), Expect = 5e-05
Identities = 77/290 (26%), Positives = 120/290 (41%), Gaps = 28/290 (9%)
Query: 38 PAEVTLDPELVAVLAPLEVVLDSELVTV-LIPLDTVLDSELVAVLASLEVVL------ES 90
P EV P +V P V SE+ +P D + + +VL S V E
Sbjct: 1196 PTEVPSSPSEESVSQPEPPVSQSEISEPSAVPTDYSVSASDPSVLVSEAAVTVPEPPPEP 1255
Query: 91 ELVAVLAPLEVVLDSELVAVLTPLEVVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDS 150
E L P+E + +E V+ V ++ TVL SE V++ DS
Sbjct: 1256 ESSITLTPVESAVVAEEHEVVPERPVTCMVSETPAMSAEPTVLASE-PPVMSETAETFDS 1314
Query: 151 ELVA--VLAPLEGVLDSELVTVLIPLDTVLDSELVAVP-----APLE----VVLESELVA 199
+ V + + L VT + +++L+ +A P A LE VLES V
Sbjct: 1315 MRASGHVASEVSTSLLVPAVTTPVLAESILEPPAMAAPESSAMAVLESSAVTVLESSTVT 1374
Query: 200 VLAPLEV-VLDSELVAVLAPLEVVLDSELVAVPAPLEVVLESELVAVLAPLEVVLDSELV 258
VL V VL+ +V V P VV + + V +P P+ LE V VL P VL ++
Sbjct: 1375 VLESSTVTVLEPSVVTVPEP-PVVAEPDYVTIPVPVVSALEPS-VPVLEPAVSVLQPSMI 1432
Query: 259 ----AVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVA 304
+V TV SE ++ V+ +E+ P+ +L+S +++
Sbjct: 1433 VSEPSVSVQESTVTVSEPAVTVSEQTQVIPTEVAIESTPM--ILESSIMS 1480
Score = 40.0 bits (92), Expect = 0.005
Identities = 74/242 (30%), Positives = 100/242 (41%), Gaps = 26/242 (10%)
Query: 218 PLEVVLDSELVAVPAPLEVVLESEL---------VAVLAPLEVVLDSELVAVLAPLDTVL 268
P EV +V P V +SE+ +V A VL SE AV P +
Sbjct: 1196 PTEVPSSPSEESVSQPEPPVSQSEISEPSAVPTDYSVSASDPSVLVSE-AAVTVP-EPPP 1253
Query: 269 ESELVAVLAPLE-VVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTV 327
E E L P+E V+ E VP + SE A+ A VL SE + +T
Sbjct: 1254 EPESSITLTPVESAVVAEEHEVVPERPVTCMVSETPAMSAE-PTVLASEPPVMSETAET- 1311
Query: 328 LDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLES---VLDSELVAVL-AL 383
DS + EV + AV P+ E A+ AP S VL+S V VL +
Sbjct: 1312 FDSMRASGHVASEVSTSLLVPAVTTPVLAESILEPPAMAAPESSAMAVLESSAVTVLESS 1371
Query: 384 LDTVLDSELVAVLAPLEVTL-------DPELVTVLAPLEGVLDSELVAVLAPLEVVLDSE 436
TVL+S V VL P VT+ +P+ VT+ P+ L+ V VL P VL
Sbjct: 1372 TVTVLESSTVTVLEPSVVTVPEPPVVAEPDYVTIPVPVVSALEPS-VPVLEPAVSVLQPS 1430
Query: 437 LV 438
++
Sbjct: 1431 MI 1432
Score = 37.0 bits (84), Expect = 0.043
Identities = 90/293 (30%), Positives = 117/293 (39%), Gaps = 25/293 (8%)
Query: 231 PAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLDTVLESELVAVLA----PLEVVLDSE 286
P P E E + L P E + L P L +E A+ A P EV
Sbjct: 1148 PLPPE---EPPTMPPLPPEEPPMTPPLPPEEPPEGPALPTEQSALTAENTWPTEVPSSPS 1204
Query: 287 LVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSE 346
+V P V SE + P V D +V A +VL SE AV P E + E
Sbjct: 1205 EESVSQPEPPVSQSE---ISEPSAVPTD---YSVSASDPSVLVSE-AAVTVP-EPPPEPE 1256
Query: 347 LVAVLAPLE--VVLESELVAVLAPLESVLDSELVAVLALLDTVLDSELVAVLAPLEVTLD 404
L P+E VV E V P+ ++ SE A+ A TVL SE V++ T D
Sbjct: 1257 SSITLTPVESAVVAEEHEVVPERPVTCMV-SETPAMSAE-PTVLASE-PPVMSETAETFD 1313
Query: 405 PELVTVLAPLEGVLDSELVAVLAPLEVVLDSELVAMLIPLD---AVLNSELVAVLIPLEV 461
+ E + AV P+ E AM P AVL S V VL V
Sbjct: 1314 SMRASGHVASEVSTSLLVPAVTTPVLAESILEPPAMAAPESSAMAVLESSAVTVLESSTV 1373
Query: 462 -VWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLDPELVAVLAPLEITLDPVLA 513
V S VT+L P VT+ PE V P VT+ +V+ L P L+P ++
Sbjct: 1374 TVLESSTVTVLEPSVVTV-PEPPVVAEPDYVTIPVPVVSALEPSVPVLEPAVS 1425
Score = 30.0 bits (66), Expect = 5.3
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 26 VVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDSELVTVLIPLDTVLDSELVAVLASLE 85
VV +P V EP VT+ +V+ L P VL+ V+VL P ++ V+V S
Sbjct: 1388 VVTVPEPPVVAEPDYVTIPVPVVSALEPSVPVLE-PAVSVLQP-SMIVSEPSVSVQES-- 1443
Query: 86 VVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDSELVA 124
V SE ++ V+ +E+ TP+ +L+S +++
Sbjct: 1444 TVTVSEPAVTVSEQTQVIPTEVAIESTPM--ILESSIMS 1480
>gi|24308527 stereocilin [Homo sapiens]
Length = 1775
Score = 39.3 bits (90), Expect = 0.009
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 343 LDSELVAVLAPLEVV--LESELVAVLAPLESVLDSELVAVLALLDTVLDSELVAVLAPLE 400
LDS+L+ L P++++ L +E + ++ L +L+A+ L L + LAP E
Sbjct: 1256 LDSKLLLDL-PIQLMDRLSNESIMLVVELVQRAPEQLLALTPLHQAALAERALQNLAPKE 1314
Query: 401 VTLDPELVTVLAPLEGVLDSELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLE 460
+ E++ L PL G L +E + PL+++L L +EL +L+
Sbjct: 1315 TPVSGEVLETLGPLVGFLGTESTRQI-PLQILLSHLSQLQGFCLGETFATELGWLLLQES 1373
Query: 461 V-----VWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLDPE 496
V +W+ + V L TL E ++ L P E L PE
Sbjct: 1374 VLGKPELWSQDEVEQAGRLVFTLSTEAIS-LIPRE-ALGPE 1412
Score = 33.9 bits (76), Expect = 0.36
Identities = 46/147 (31%), Positives = 63/147 (42%), Gaps = 38/147 (25%)
Query: 32 RAAVPEPAEVTLDPELVAVLAPLEVVLDSELVTVLIPLDTVLDSELVAVLASLEVVLESE 91
R A+PEP T+ PEL LDS+L+ LD L +L+ L++ ++L E
Sbjct: 1238 RMAMPEPEWTTVGPELNG--------LDSKLL-----LD--LPIQLMDRLSNESIMLVVE 1282
Query: 92 LVAVLAPLEVVLDSELVAVLTPLEVVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDSE 151
LV AP E + LTPL L + LAP E + E
Sbjct: 1283 LVQ-RAP-------EQLLALTPLH--------------QAALAERALQNLAPKETPVSGE 1320
Query: 152 LVAVLAPLEGVLDSELVTVLIPLDTVL 178
++ L PL G L +E T IPL +L
Sbjct: 1321 VLETLGPLVGFLGTE-STRQIPLQILL 1346
Score = 30.8 bits (68), Expect = 3.1
Identities = 48/190 (25%), Positives = 76/190 (40%), Gaps = 14/190 (7%)
Query: 283 LDSELVA-VPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEV 341
LDS+L+ +P L L +E + ++ L +L+A+ L L + LAP E
Sbjct: 1256 LDSKLLLDLPIQLMDRLSNESIMLVVELVQRAPEQLLALTPLHQAALAERALQNLAPKET 1315
Query: 342 VLDSELVAVLAPLEVVLESELVAVLAPLESVLDSELVAVLALLDTVLDSELVAVLAPLEV 401
+ E++ L PL L +E + PL+ +L L +EL +L V
Sbjct: 1316 PVSGEVLETLGPLVGFLGTESTRQI-PLQILLSHLSQLQGFCLGETFATELGWLLLQESV 1374
Query: 402 TLDPELVTVLAPLEGVLDSELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEV 461
PEL + V L L +E ++ LIP +A L E + L+ +
Sbjct: 1375 LGKPEL----------WSQDEVEQAGRLVFTLSTEAIS-LIPREA-LGPETLERLLEKQQ 1422
Query: 462 VWNSELVTML 471
W V L
Sbjct: 1423 SWEQSRVGQL 1432
Score = 29.3 bits (64), Expect = 9.0
Identities = 70/261 (26%), Positives = 107/261 (40%), Gaps = 17/261 (6%)
Query: 248 PLEVVLDSELVAVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAPLE-VVLDSELVAVL 306
P + EL+A +P+ L +V A L++++ + L P L+ +VL +E A
Sbjct: 697 PSSGISKMELLACFSPVLWDLLQREKSVWA-LQILVQAYLHMPPENLQQLVLSAEREAAQ 755
Query: 307 APLEVVLDSELVAVLALLDTVLDS--ELVAVLAPLEVVLDSELVAVLAPLEVVLESELVA 364
L ++L +L L + + + L A+L L S+L L+PL L +
Sbjct: 756 GFLTLMLQGKLQGKLQVPPSEEQALGRLTALLLQRYPRLTSQLFIDLSPLIPFLAVSDLM 815
Query: 365 VLAPLESVLDSELVAVLALLDTVLDSELVAV----LAPL---EVTLDP-ELVTVLAPLEG 416
P DS L A+ + + A+ LAP EV P EL+ + PL
Sbjct: 816 RFPPSLLANDSVLAAIRDYSPGMRPEQKEALAKRLLAPELFGEVPAWPQELLWAVLPLLP 875
Query: 417 VLDSELVAVLAP--LEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPL 474
L E L+P ++ + DS A L P A ++ L+ V E V L PL
Sbjct: 876 HLPLENFLQLSPHQIQALEDSWPAAGLGPGHA---RHVLRSLVNQSVQDGEEQVRRLGPL 932
Query: 475 EVTLDPEMVAVLTPLEVTLDP 495
L PE + L PL P
Sbjct: 933 ACFLSPEELQSLVPLSDPTGP 953
>gi|58761535 zinc finger protein 518B [Homo sapiens]
Length = 1074
Score = 36.2 bits (82), Expect = 0.073
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 25 EVVCIPVRAAVPEPAEVTLDPEL---VAVLAPL-EVVLDSELVTVLIPLDTVLDSELVAV 80
+VVCIP + + EP EV L V VL+P E V +TV+ P + V+ + +A
Sbjct: 287 DVVCIPNKMTLSEPNEVNLFENKNVEVEVLSPAKEPVQPGMPLTVVAPAELVVPANCLAQ 346
Query: 81 LASLEVVL-ESELVAVLAPLE 100
L ++VV +LV L PLE
Sbjct: 347 LIDVKVVNGTQQLVLKLFPLE 367
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 34.7 bits (78), Expect = 0.21
Identities = 89/306 (29%), Positives = 104/306 (33%), Gaps = 35/306 (11%)
Query: 11 PPGFASLTAVDALWEVVCIPVRAAVPE--PAEVTLDPELVAVLAPLEVVLDSEL----VT 64
P G A++ AV + E A E A PE A+ + + + VT
Sbjct: 917 PEGTAAVAAVSSPEETAPAVAAAITQEGMSAVAGFSPEWAALAITVPITEEDGTPEGPVT 976
Query: 65 VLIPLDTVLDSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDSELVA 124
+ + + AV S S AV P E S AV TP E S A
Sbjct: 977 PATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPT--SPAAAVPTPEEPT--SPAAA 1032
Query: 125 VLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVA 184
V P + S AV P E S AV P E + V P S A
Sbjct: 1033 VPPPEEPT--SPAAAVPTPEEPT--SPAAAVPTPEEPTSPAAAV----PTPEEPTSPAAA 1084
Query: 185 VPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLESELVA 244
VP P E S AV P E S AV P E S AVP P E S A
Sbjct: 1085 VPTPEEPT--SPAAAVPTPEEPT--SPAAAVPTPEEPA--SPAAAVPTPEEPA--SPAAA 1136
Query: 245 VLAPLEVVLDSELVAVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVA 304
V P E + V T ES AV P S AVP P E + A
Sbjct: 1137 VPTPEEPAFPAPAVP------TPEESASAAVAVPTPEESASPAAAVPTPAE---SASFAA 1187
Query: 305 VLAPLE 310
V+A LE
Sbjct: 1188 VVATLE 1193
>gi|46048439 N-acetyltransferase 6 [Homo sapiens]
Length = 308
Score = 34.7 bits (78), Expect = 0.21
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 439 AMLIP-LDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLDPEL 497
A L P LD EL+ P E+ + L PL+ T PEM P E+TLDPE
Sbjct: 11 AKLTPTLDPTHRMELILSTSPAELTLDPACQPKL-PLDSTCQPEMTFNPGPTELTLDPEH 69
Query: 498 VAVLAP----LEITLDPV 511
P E+TL+PV
Sbjct: 70 QPEETPAPSLAELTLEPV 87
Score = 30.8 bits (68), Expect = 3.1
Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 20/100 (20%)
Query: 400 EVTLDPELVTVLAPLEGVLDSELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPL 459
E+TL P + L+ EL+ +P E+ LD L PL
Sbjct: 3 ELTLSPGPAKLTPTLDPTHRMELILSTSPAELTLDPACQPKL----------------PL 46
Query: 460 EVVWNSELVTMLTPLEVTLDPEMVAVLTP----LEVTLDP 495
+ E+ P E+TLDPE TP E+TL+P
Sbjct: 47 DSTCQPEMTFNPGPTELTLDPEHQPEETPAPSLAELTLEP 86
Score = 30.4 bits (67), Expect = 4.0
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 384 LDTVLDSELVAVLAPLEVTLDPELVTVLAPLEGVLDSELVAVLAPLEVVLDSE 436
LD EL+ +P E+TLDP L PL+ E+ P E+ LD E
Sbjct: 17 LDPTHRMELILSTSPAELTLDPACQPKL-PLDSTCQPEMTFNPGPTELTLDPE 68
>gi|15559211 RE1-silencing transcription factor [Homo sapiens]
Length = 1097
Score = 34.3 bits (77), Expect = 0.28
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 10/141 (7%)
Query: 186 PAPLEVVLES----ELVAVLAPLEVVLDSELVAVLA---PLEVVLDSELVAVPAPLEVVL 238
P +EVV E EL+ + P ++V ++A + P+E PAP+E
Sbjct: 651 PVQMEVVQEGPAQKELLPPVEPAQMVGAQIVLAHMELPPPMETAQTEVAQMGPAPMEPAQ 710
Query: 239 ESELVAVLAPLEVVLDSELVAVLAPLDTVLESELVAV--LAPLEVVLDSEL-VAVPAPLE 295
AP++VV + L+P V++ E V + P+EVV + + + P+E
Sbjct: 711 MEVAQVESAPMQVVQKEPVQMELSPPMEVVQKEPVQIELSPPMEVVQKEPVKIELSPPIE 770
Query: 296 VVLDSELVAVLAPLEVVLDSE 316
VV + L+P V+ E
Sbjct: 771 VVQKEPVQMELSPPMGVVQKE 791
Score = 32.0 bits (71), Expect = 1.4
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 173 PLDTVLDSELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAV-- 230
P++T PAP+E AP++VV + L+P V+ E V +
Sbjct: 690 PMETAQTEVAQMGPAPMEPAQMEVAQVESAPMQVVQKEPVQMELSPPMEVVQKEPVQIEL 749
Query: 231 PAPLEVVLESEL-VAVLAPLEVVLDSELVAVLAPLDTVLESE 271
P+EVV + + + + P+EVV + L+P V++ E
Sbjct: 750 SPPMEVVQKEPVKIELSPPIEVVQKEPVQMELSPPMGVVQKE 791
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 33.9 bits (76), Expect = 0.36
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 15/120 (12%)
Query: 55 EVVLDSELVTVLIPLDTVLDSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPL 114
E++L E T+L + + +D+ L++++ + ES L LE D V++LT L
Sbjct: 82 ELMLQDE--TLLGTMQSYMDASLISLIEDFGSLGESRL-----SLE---DQNEVSLLTAL 131
Query: 115 EVVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPL 174
+LD+ L+P D++ DSEL +++P E S L +L + +L+T + PL
Sbjct: 132 TEILDNADSENLSPFDSIPDSEL--LVSPRE---GSSLHKLLTLSRTPPERDLITPVDPL 186
Score = 30.0 bits (66), Expect = 5.3
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 115 EVVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDSEL-------VAVLAPLEGVLDSEL 167
E++L E +L + + +D+ L++++ + +S L V++L L +LD+
Sbjct: 82 ELMLQDE--TLLGTMQSYMDASLISLIEDFGSLGESRLSLEDQNEVSLLTALTEILDNAD 139
Query: 168 VTVLIPLDTVLDSELVAVP 186
L P D++ DSEL+ P
Sbjct: 140 SENLSPFDSIPDSELLVSP 158
Score = 29.6 bits (65), Expect = 6.9
Identities = 28/112 (25%), Positives = 58/112 (51%), Gaps = 14/112 (12%)
Query: 295 EVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSEL-------VAVLAPLEVVLDSEL 347
E++L E +L ++ +D+ L++++ ++ +S L V++L L +LD+
Sbjct: 82 ELMLQDE--TLLGTMQSYMDASLISLIEDFGSLGESRLSLEDQNEVSLLTALTEILDNAD 139
Query: 348 VAVLAPLEVVLESELVAVLAPLESVLDSELVAVLALLDTVLDSELVAVLAPL 399
L+P + + +SEL +++P E S L +L L T + +L+ + PL
Sbjct: 140 SENLSPFDSIPDSEL--LVSPREG---SSLHKLLTLSRTPPERDLITPVDPL 186
>gi|82546847 hypothetical protein LOC9907 [Homo sapiens]
Length = 807
Score = 30.8 bits (68), Expect = 3.1
Identities = 52/183 (28%), Positives = 71/183 (38%), Gaps = 28/183 (15%)
Query: 253 LDSELVAVLAPL---DTVLESELVAVLAP-LEVVLDSELVAVPAPLEVVLDSELVAVLAP 308
L SE VA+L L T LE + P L VLD +L + PA E L + +
Sbjct: 446 LTSEFVALLPALVDAGTALEMLHALLDLPCLTAVLDLQLRSAPAASERPLWDTSLRAPSC 505
Query: 309 LEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSEL-VAVLAPLEVVLESELVAVLA 367
LE D + + L S LAPL +L A +A + + L A +
Sbjct: 506 LEAFRDPQFQGLFQYLLRPKASGATERLAPLHQLLQPMAGCARVAQCAQAVPTLLQAFFS 565
Query: 368 PLESVLDSELVAVLALL------------------DTVLDSELVAVLAPLEVTLDPELVT 409
+ V D L+ LALL +VL S+ +A+ TL P LV
Sbjct: 566 AVTQVADGSLINQLALLLLGRSDSLYPAPGYAAGVHSVLSSQFLAL-----CTLKPSLVV 620
Query: 410 VLA 412
LA
Sbjct: 621 ELA 623
>gi|33239440 zinc finger protein, Y-linked isoform 1 [Homo sapiens]
Length = 801
Score = 30.4 bits (67), Expect = 4.0
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 74 DSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDSELVA-VLAPLDTV 132
D + V + +E V+ E V LE SE V + E VLDS++ V P TV
Sbjct: 59 DPDSVVIQDVVEDVVIEEDVQCSDILEEADVSENVIIP---EQVLDSDVTEEVSLPHCTV 115
Query: 133 LDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVV 192
D L + + + + ++ + V D V ++ D+V+++E++ P ++V
Sbjct: 116 PDDVLASDITSTSMSMPEHVLT--SESMHVCDIGHVEHMVH-DSVVEAEIITDPLTSDIV 172
Query: 193 LESELVAVLAPLEVVLDSELVAV 215
E LVA AP E V+D+ ++V
Sbjct: 173 SEEVLVADCAP-EAVIDASGISV 194
>gi|223717965 zinc finger protein, Y-linked isoform 2 [Homo sapiens]
Length = 724
Score = 30.4 bits (67), Expect = 4.0
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 74 DSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDSELVA-VLAPLDTV 132
D + V + +E V+ E V LE SE V + E VLDS++ V P TV
Sbjct: 33 DPDSVVIQDVVEDVVIEEDVQCSDILEEADVSENVIIP---EQVLDSDVTEEVSLPHCTV 89
Query: 133 LDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVV 192
D L + + + + ++ + V D V ++ D+V+++E++ P ++V
Sbjct: 90 PDDVLASDITSTSMSMPEHVLT--SESMHVCDIGHVEHMVH-DSVVEAEIITDPLTSDIV 146
Query: 193 LESELVAVLAPLEVVLDSELVAV 215
E LVA AP E V+D+ ++V
Sbjct: 147 SEEVLVADCAP-EAVIDASGISV 168
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 30.0 bits (66), Expect = 5.3
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 6/141 (4%)
Query: 158 PLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLA 217
PLE + E+ L+P+D + EL LE E E L++ L EL +
Sbjct: 311 PLEPEEEEEVELELMPVDLGSEQELEQQRQELERQQELERQQEQRQLQLKLQEELQQLEQ 370
Query: 218 PLE----VVLDSELVAVPAPLEV-VLESELVAVLAPLEVVLDSELVAVLAPLDTVLESEL 272
LE + E+ P+E+ + E+ L P++ L ELV +
Sbjct: 371 QLEQQQQQLEQQEVQLELTPVELGAQQQEVQLELTPVQPELQLELVPAAGGGGAAVPGAP 430
Query: 273 VA-VLAPLEVVLDSELVAVPA 292
A V+AP V+ EL+ +PA
Sbjct: 431 AAVVVAPPGYVVVQELMVLPA 451
Score = 29.3 bits (64), Expect = 9.0
Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 53 PLEVVLDSELVTVLIPLDTVLDSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLT 112
PLE + E+ L+P+D + EL LE E E L++ L EL +
Sbjct: 311 PLEPEEEEEVELELMPVDLGSEQELEQQRQELERQQELERQQEQRQLQLKLQEELQQLEQ 370
Query: 113 PLE----VVLDSELVAVLAPLDT-VLDSELVAVLAPLEVVLDSELV-AVLAPLEGVLDSE 166
LE + E+ L P++ E+ L P++ L ELV A V +
Sbjct: 371 QLEQQQQQLEQQEVQLELTPVELGAQQQEVQLELTPVQPELQLELVPAAGGGGAAVPGAP 430
Query: 167 LVTVLIPLDTVLDSELVAVPAPLEVVLESELVAVLAP 203
V+ P V+ EL+ +PA V +VA+ P
Sbjct: 431 AAVVVAPPGYVVVQELMVLPA----VAAPAVVAIPGP 463
>gi|239753930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 196
Score = 30.0 bits (66), Expect = 5.3
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 15/170 (8%)
Query: 68 PLDTV--LDSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDSELVAV 125
PLD+V +S + + L VLE E V+ EV +++ L+PLEV S ++
Sbjct: 6 PLDSVSLTNSPNIGPITVLVTVLEHERRVVVVLPEVTFSLPVLSSLSPLEVTSFSVWYSL 65
Query: 126 LAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAV 185
L P T D+ V S L+ + P G+ +L + D+EL V
Sbjct: 66 LVPGLTFPDTS--------SNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEV 117
Query: 186 PAPLEVVLESELVAVLAPL--EVVLDSELVAVLAPLEVVLDSELVAVPAP 233
P + SEL P+ + L VL P+ + + +L A+P P
Sbjct: 118 QCP--ALPRSELPGFQVPVLPGLGLPGFWFPVL-PVPELPEFQLPALPGP 164
>gi|42544121 vacuolar protein sorting 13C protein isoform 1A [Homo
sapiens]
Length = 3710
Score = 30.0 bits (66), Expect = 5.3
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 7/138 (5%)
Query: 65 VLIPLDTVLDSELVAVLASLEVVLESELVAV----LAPLEVVLDSELVAVL---TPLEVV 117
++IP +V + ++A L + V + LV + L P+ ++ EL + T L+
Sbjct: 1722 IIIPQSSVSPNAVIADLGLIRVENKFSLVPMEHYSLPPVIDKMNIELTQLKLSRTILQAS 1781
Query: 118 LDSELVAVLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTV 177
L + +L P++ +L + A + E+ L P++ L + +TVL+ +
Sbjct: 1782 LPQNDIEILKPVNMLLSIQRNLAAAWYVQIPGMEIKGKLKPMQVALSEDDLTVLMKILLE 1841
Query: 178 LDSELVAVPAPLEVVLES 195
E + P+P + V E+
Sbjct: 1842 NLGEASSQPSPTQSVQET 1859
>gi|66348091 vacuolar protein sorting 13C protein isoform 1B [Homo
sapiens]
Length = 3585
Score = 30.0 bits (66), Expect = 5.3
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 7/138 (5%)
Query: 65 VLIPLDTVLDSELVAVLASLEVVLESELVAV----LAPLEVVLDSELVAVL---TPLEVV 117
++IP +V + ++A L + V + LV + L P+ ++ EL + T L+
Sbjct: 1722 IIIPQSSVSPNAVIADLGLIRVENKFSLVPMEHYSLPPVIDKMNIELTQLKLSRTILQAS 1781
Query: 118 LDSELVAVLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTV 177
L + +L P++ +L + A + E+ L P++ L + +TVL+ +
Sbjct: 1782 LPQNDIEILKPVNMLLSIQRNLAAAWYVQIPGMEIKGKLKPMQVALSEDDLTVLMKILLE 1841
Query: 178 LDSELVAVPAPLEVVLES 195
E + P+P + V E+
Sbjct: 1842 NLGEASSQPSPTQSVQET 1859
>gi|66347845 vacuolar protein sorting 13C protein isoform 2B [Homo
sapiens]
Length = 3628
Score = 30.0 bits (66), Expect = 5.3
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 7/138 (5%)
Query: 65 VLIPLDTVLDSELVAVLASLEVVLESELVAV----LAPLEVVLDSELVAVL---TPLEVV 117
++IP +V + ++A L + V + LV + L P+ ++ EL + T L+
Sbjct: 1765 IIIPQSSVSPNAVIADLGLIRVENKFSLVPMEHYSLPPVIDKMNIELTQLKLSRTILQAS 1824
Query: 118 LDSELVAVLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTV 177
L + +L P++ +L + A + E+ L P++ L + +TVL+ +
Sbjct: 1825 LPQNDIEILKPVNMLLSIQRNLAAAWYVQIPGMEIKGKLKPMQVALSEDDLTVLMKILLE 1884
Query: 178 LDSELVAVPAPLEVVLES 195
E + P+P + V E+
Sbjct: 1885 NLGEASSQPSPTQSVQET 1902
>gi|66347828 vacuolar protein sorting 13C protein isoform 2A [Homo
sapiens]
Length = 3753
Score = 30.0 bits (66), Expect = 5.3
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 7/138 (5%)
Query: 65 VLIPLDTVLDSELVAVLASLEVVLESELVAV----LAPLEVVLDSELVAVL---TPLEVV 117
++IP +V + ++A L + V + LV + L P+ ++ EL + T L+
Sbjct: 1765 IIIPQSSVSPNAVIADLGLIRVENKFSLVPMEHYSLPPVIDKMNIELTQLKLSRTILQAS 1824
Query: 118 LDSELVAVLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTV 177
L + +L P++ +L + A + E+ L P++ L + +TVL+ +
Sbjct: 1825 LPQNDIEILKPVNMLLSIQRNLAAAWYVQIPGMEIKGKLKPMQVALSEDDLTVLMKILLE 1884
Query: 178 LDSELVAVPAPLEVVLES 195
E + P+P + V E+
Sbjct: 1885 NLGEASSQPSPTQSVQET 1902
>gi|4885615 signal transducer and activator of transcription 2 [Homo
sapiens]
Length = 851
Score = 29.6 bits (65), Expect = 6.9
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 444 LDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPL---EVTLDPELVAV 500
L V N ++ + PLE+ EL ++ L + +PE+ L PL + L PEL +V
Sbjct: 695 LIVVSNRQVDELQQPLELKPEPELESLELELGLVPEPELSLDLEPLLKAGLDLGPELESV 754
Query: 501 LAPLEITLDPVL 512
LE TL+PV+
Sbjct: 755 ---LESTLEPVI 763
>gi|239748472 PREDICTED: hypothetical protein [Homo sapiens]
Length = 196
Score = 29.6 bits (65), Expect = 6.9
Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 12/139 (8%)
Query: 68 PLDTV--LDSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDSELVAV 125
PLD+V +S + + L VLE E V+ EV +++ L+PLEV S ++
Sbjct: 6 PLDSVSLTNSPNIGPITVLVTVLEHERRVVVVLPEVTFSLPVLSSLSPLEVTSFSVWYSL 65
Query: 126 LAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAV 185
L P T D+ V S L+ + P G+ +L + D+EL V
Sbjct: 66 LVPGLTFPDTS--------SNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEV 117
Query: 186 PAPLEVVLESELVAVLAPL 204
P + SEL P+
Sbjct: 118 QCP--ALPRSELPGFQVPV 134
>gi|239742436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 196
Score = 29.6 bits (65), Expect = 6.9
Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 12/139 (8%)
Query: 68 PLDTV--LDSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDSELVAV 125
PLD+V +S + + L VLE E V+ EV +++ L+PLEV S ++
Sbjct: 6 PLDSVSLTNSPNIGPITVLVTVLEHERRVVVVLPEVTFSLPVLSSLSPLEVTSFSVWYSL 65
Query: 126 LAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAV 185
L P T D+ V S L+ + P G+ +L + D+EL V
Sbjct: 66 LVPGLTFPDTS--------SNVPQSGLLGLAFPEPGLSGLKLPDSECHCPVLPDTELSEV 117
Query: 186 PAPLEVVLESELVAVLAPL 204
P + SEL P+
Sbjct: 118 QCP--ALPRSELPGFQVPV 134
>gi|55749742 HEAT repeat containing 5B [Homo sapiens]
Length = 2071
Score = 29.6 bits (65), Expect = 6.9
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 422 LVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTML 471
+ A L L +LDS + I D ++ EL++VL L + WN V +L
Sbjct: 1611 VTACLQALHTLLDSPYARVHIAEDQLIGVELLSVLHRLLLTWNPSSVQLL 1660
>gi|139394579 zinc finger and BTB domain containing 40 [Homo sapiens]
Length = 1239
Score = 29.6 bits (65), Expect = 6.9
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 163 LDSELVTVLIPLDTVLDSELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEVV 222
L EL T LD+ L+SE V + S++ V+ E V +E V L ++
Sbjct: 1139 LCGELFTSQAQLDSHLESEHPKVMSTETQAAASQMAQVIQTPEPVAPTEQVITLEETQLA 1198
Query: 223 LDSELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAV 260
V +P SELVAV +E +LD + +
Sbjct: 1199 GSQVFVTLPDSQASQASSELVAV--TVEDLLDGTVTLI 1234
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.136 0.352
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,680,767
Number of Sequences: 37866
Number of extensions: 643720
Number of successful extensions: 2447
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1779
Number of HSP's gapped (non-prelim): 228
length of query: 514
length of database: 18,247,518
effective HSP length: 107
effective length of query: 407
effective length of database: 14,195,856
effective search space: 5777713392
effective search space used: 5777713392
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.