Guide to the Human Genome
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Search of human proteins with 239740753

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239740753 PREDICTED: hypothetical protein [Homo sapiens]
         (243 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754287 PREDICTED: hypothetical protein [Homo sapiens]           511   e-145
gi|239748824 PREDICTED: hypothetical protein XP_002346830 [Homo ...   511   e-145
gi|239742855 PREDICTED: hypothetical protein XP_002342663 [Homo ...   511   e-145
gi|239740869 PREDICTED: hypothetical protein XP_002344072 [Homo ...   511   e-145
gi|239740804 PREDICTED: hypothetical protein [Homo sapiens]           511   e-145
gi|239740753 PREDICTED: hypothetical protein [Homo sapiens]           511   e-145
gi|239513961 PREDICTED: hypothetical protein [Homo sapiens]           511   e-145
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap...    41   0.001
gi|37595553 ring finger protein 111 [Homo sapiens]                     40   0.002
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]          40   0.002
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]          40   0.002
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]          40   0.002
gi|4503657 forkhead box H1 [Homo sapiens]                              39   0.004
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho...    39   0.004
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     39   0.004
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo...    39   0.005
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ...    39   0.005
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]            38   0.007
gi|239758167 PREDICTED: hypothetical protein XP_002346321 [Homo ...    38   0.009
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         38   0.009
gi|241982780 programmed cell death 6 interacting protein isoform...    37   0.012
gi|22027538 programmed cell death 6 interacting protein isoform ...    37   0.012
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]                  37   0.012
gi|146134388 YLP motif containing 1 [Homo sapiens]                     37   0.016
gi|110349719 titin isoform N2-A [Homo sapiens]                         37   0.020
gi|110349717 titin isoform novex-2 [Homo sapiens]                      37   0.020
gi|110349713 titin isoform novex-1 [Homo sapiens]                      37   0.020
gi|110349715 titin isoform N2-B [Homo sapiens]                         37   0.020
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]       37   0.020
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    37   0.020

>gi|239754287 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 243

 Score =  511 bits (1317), Expect = e-145
 Identities = 243/243 (100%), Positives = 243/243 (100%)

Query: 1   MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
           MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA
Sbjct: 1   MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60

Query: 61  PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
           PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP
Sbjct: 61  PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120

Query: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
           LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG
Sbjct: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180

Query: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
           LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL
Sbjct: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240

Query: 241 KSS 243
           KSS
Sbjct: 241 KSS 243


>gi|239748824 PREDICTED: hypothetical protein XP_002346830 [Homo
           sapiens]
          Length = 243

 Score =  511 bits (1317), Expect = e-145
 Identities = 243/243 (100%), Positives = 243/243 (100%)

Query: 1   MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
           MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA
Sbjct: 1   MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60

Query: 61  PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
           PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP
Sbjct: 61  PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120

Query: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
           LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG
Sbjct: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180

Query: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
           LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL
Sbjct: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240

Query: 241 KSS 243
           KSS
Sbjct: 241 KSS 243


>gi|239742855 PREDICTED: hypothetical protein XP_002342663 [Homo
           sapiens]
          Length = 243

 Score =  511 bits (1317), Expect = e-145
 Identities = 243/243 (100%), Positives = 243/243 (100%)

Query: 1   MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
           MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA
Sbjct: 1   MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60

Query: 61  PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
           PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP
Sbjct: 61  PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120

Query: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
           LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG
Sbjct: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180

Query: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
           LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL
Sbjct: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240

Query: 241 KSS 243
           KSS
Sbjct: 241 KSS 243


>gi|239740869 PREDICTED: hypothetical protein XP_002344072 [Homo
           sapiens]
          Length = 243

 Score =  511 bits (1317), Expect = e-145
 Identities = 243/243 (100%), Positives = 243/243 (100%)

Query: 1   MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
           MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA
Sbjct: 1   MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60

Query: 61  PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
           PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP
Sbjct: 61  PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120

Query: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
           LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG
Sbjct: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180

Query: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
           LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL
Sbjct: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240

Query: 241 KSS 243
           KSS
Sbjct: 241 KSS 243


>gi|239740804 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 243

 Score =  511 bits (1317), Expect = e-145
 Identities = 243/243 (100%), Positives = 243/243 (100%)

Query: 1   MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
           MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA
Sbjct: 1   MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60

Query: 61  PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
           PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP
Sbjct: 61  PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120

Query: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
           LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG
Sbjct: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180

Query: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
           LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL
Sbjct: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240

Query: 241 KSS 243
           KSS
Sbjct: 241 KSS 243


>gi|239740753 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 243

 Score =  511 bits (1317), Expect = e-145
 Identities = 243/243 (100%), Positives = 243/243 (100%)

Query: 1   MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
           MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA
Sbjct: 1   MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60

Query: 61  PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
           PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP
Sbjct: 61  PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120

Query: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
           LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG
Sbjct: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180

Query: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
           LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL
Sbjct: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240

Query: 241 KSS 243
           KSS
Sbjct: 241 KSS 243


>gi|239513961 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 243

 Score =  511 bits (1317), Expect = e-145
 Identities = 243/243 (100%), Positives = 243/243 (100%)

Query: 1   MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60
           MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA
Sbjct: 1   MAMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTA 60

Query: 61  PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120
           PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP
Sbjct: 61  PHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNP 120

Query: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180
           LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG
Sbjct: 121 LSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATKEG 180

Query: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240
           LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL
Sbjct: 181 LTLQKTVPDLRHRRQYSPLLVCRDSLFLSGPYGADEVPFRSRMEADEHEKWFREPPPPSL 240

Query: 241 KSS 243
           KSS
Sbjct: 241 KSS 243


>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
           sapiens]
          Length = 505

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 38/116 (32%), Positives = 46/116 (39%), Gaps = 18/116 (15%)

Query: 25  PPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCNIPFPHAARGNVLIV 84
           PPPP     S P   P+R   R +  P P   P  AP  P PPP        +R +V + 
Sbjct: 288 PPPPPPPHNSGPPPPPAR--GRGAPPPPPSRAPTAAP--PPPPP--------SRPSVAVP 335

Query: 85  GSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWP 140
                +      PALPS+A S    G P  P   + L  G   P  PP   PP  P
Sbjct: 336 PPPPNRMYPPPPPALPSSAPS----GPP--PPPPSVLGVGPVAPPPPPPPPPPPGP 385



 Score = 35.4 bits (80), Expect = 0.045
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 5/61 (8%)

Query: 11  PSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCN 70
           P   P     A   PPPP +   ++P   P+R        P P + P++AP  P PPP +
Sbjct: 310 PPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMY-----PPPPPALPSSAPSGPPPPPPS 364

Query: 71  I 71
           +
Sbjct: 365 V 365



 Score = 29.3 bits (64), Expect = 3.2
 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 6/64 (9%)

Query: 11  PSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCN 70
           P S P V +     PPPP +     P A PS     +   P P S     P  P PPP  
Sbjct: 326 PPSRPSVAVP----PPPPNRMYPPPPPALPSSA--PSGPPPPPPSVLGVGPVAPPPPPPP 379

Query: 71  IPFP 74
            P P
Sbjct: 380 PPPP 383


>gi|37595553 ring finger protein 111 [Homo sapiens]
          Length = 986

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 36/120 (30%), Positives = 48/120 (40%), Gaps = 13/120 (10%)

Query: 12  SSLPCVGIAAVAEP---PPPFQNRRSI------PSARPSRQLRRNSSAPGPLSTPNTAPH 62
           SS+   G + VA+P   PPP  +  S       P A  +R L   +SA  P S  N  P 
Sbjct: 616 SSIDGYGSSMVAQPQPQPPPQPSLSSCRHYMPPPYASLTRPLHHQASAC-PHSHGNPPPQ 674

Query: 63  TPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEP---ALPSAAESPGGLGSPHRPVQHN 119
           T  PP  +   PH        + SH   H     P      +AA  P  L   H+P+ H+
Sbjct: 675 TQPPPQVDYVIPHPVHAFHSQISSHATSHPVAPPPPTHLASTAAPIPQHLPPTHQPISHH 734


>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
          Length = 1012

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 42/190 (22%), Positives = 65/190 (34%), Gaps = 28/190 (14%)

Query: 8   STEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSA--------PGPLSTPNT 59
           S++P  +     +     P P  N     S+   + L+    A        P P S P  
Sbjct: 144 SSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPG 203

Query: 60  APHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHN 119
            P  P P P         +G+                   P+A+++P    +P  PV H 
Sbjct: 204 TPQLPTPGPTPSATAVPPQGS-------------------PTASQAPNQPQAPTAPVPHT 244

Query: 120 PLSWGEAV-PLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATK 178
            +    A+ P  PP   PP  P+    L  L+ S+GQ  A    +     + P    + +
Sbjct: 245 HIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQ 304

Query: 179 EGLTLQKTVP 188
            G  LQ   P
Sbjct: 305 AGPLLQHPGP 314



 Score = 36.6 bits (83), Expect = 0.020
 Identities = 35/106 (33%), Positives = 41/106 (38%), Gaps = 9/106 (8%)

Query: 11  PSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCN 70
           P+S P  G+  VA P PPF     +P   P        S     STP   P T   PPC+
Sbjct: 463 PASHPPTGLHQVA-PQPPFAQHPFVPGGPPPITPPTCPST----STPPAGPGTSAQPPCS 517

Query: 71  IPFPHAARGNVLIVGSHV-LQHLDRKEPALPSAAESPGGLGSPHRP 115
                AA G  +  GS   L  +  KE AL  A E       P  P
Sbjct: 518 ---GAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSP 560



 Score = 34.3 bits (77), Expect = 0.10
 Identities = 38/155 (24%), Positives = 55/155 (35%), Gaps = 21/155 (13%)

Query: 2   AMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAP 61
           A+++        LP   +A     PPP      +P+ +  +    + S P P S     P
Sbjct: 352 ALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKH-PPHLSGPSPFSMNANLP 410

Query: 62  HTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGS----PHRPVQ 117
               PPP   P    +  +        LQ + + +P LPS+   P GL      P  P  
Sbjct: 411 ----PPPALKPLSSLSTHHPPSAHPPPLQLMPQSQP-LPSSPAQPPGLTQSQNLPPPPAS 465

Query: 118 HNPLSWGEA-----------VPLGPPGDKPPAWPA 141
           H P    +            VP GPP   PP  P+
Sbjct: 466 HPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPS 500



 Score = 31.6 bits (70), Expect = 0.65
 Identities = 41/161 (25%), Positives = 55/161 (34%), Gaps = 42/161 (26%)

Query: 21  AVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPN--TAPHTPVP----------PP 68
           A A P    Q   S  + +  +  R     P PL+ P+    P TP+P          PP
Sbjct: 336 AAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPP 395

Query: 69  -----------CNIPFPHAARGNVLIVGSH-------VLQHLDRKEPALPSAAESPGGL- 109
                       N+P P A +    +   H        LQ + + +P LPS+   P GL 
Sbjct: 396 HLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQP-LPSSPAQPPGLT 454

Query: 110 ---GSPHRPVQHNPLSWGEAVPLGP-------PGDKPPAWP 140
                P  P  H P    +  P  P       PG  PP  P
Sbjct: 455 QSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITP 495


>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 42/190 (22%), Positives = 65/190 (34%), Gaps = 28/190 (14%)

Query: 8   STEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSA--------PGPLSTPNT 59
           S++P  +     +     P P  N     S+   + L+    A        P P S P  
Sbjct: 698 SSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPG 757

Query: 60  APHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHN 119
            P  P P P         +G+                   P+A+++P    +P  PV H 
Sbjct: 758 TPQLPTPGPTPSATAVPPQGS-------------------PTASQAPNQPQAPTAPVPHT 798

Query: 120 PLSWGEAV-PLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATK 178
            +    A+ P  PP   PP  P+    L  L+ S+GQ  A    +     + P    + +
Sbjct: 799 HIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQ 858

Query: 179 EGLTLQKTVP 188
            G  LQ   P
Sbjct: 859 AGPLLQHPGP 868



 Score = 36.6 bits (83), Expect = 0.020
 Identities = 35/106 (33%), Positives = 41/106 (38%), Gaps = 9/106 (8%)

Query: 11   PSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCN 70
            P+S P  G+  VA P PPF     +P   P        S     STP   P T   PPC+
Sbjct: 1017 PASHPPTGLHQVA-PQPPFAQHPFVPGGPPPITPPTCPST----STPPAGPGTSAQPPCS 1071

Query: 71   IPFPHAARGNVLIVGSHV-LQHLDRKEPALPSAAESPGGLGSPHRP 115
                 AA G  +  GS   L  +  KE AL  A E       P  P
Sbjct: 1072 ---GAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSP 1114



 Score = 34.3 bits (77), Expect = 0.10
 Identities = 38/155 (24%), Positives = 55/155 (35%), Gaps = 21/155 (13%)

Query: 2    AMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAP 61
            A+++        LP   +A     PPP      +P+ +  +    + S P P S     P
Sbjct: 906  ALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKH-PPHLSGPSPFSMNANLP 964

Query: 62   HTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGS----PHRPVQ 117
                PPP   P    +  +        LQ + + +P LPS+   P GL      P  P  
Sbjct: 965  ----PPPALKPLSSLSTHHPPSAHPPPLQLMPQSQP-LPSSPAQPPGLTQSQNLPPPPAS 1019

Query: 118  HNPLSWGEA-----------VPLGPPGDKPPAWPA 141
            H P    +            VP GPP   PP  P+
Sbjct: 1020 HPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPS 1054



 Score = 31.6 bits (70), Expect = 0.65
 Identities = 41/161 (25%), Positives = 55/161 (34%), Gaps = 42/161 (26%)

Query: 21   AVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPN--TAPHTPVP----------PP 68
            A A P    Q   S  + +  +  R     P PL+ P+    P TP+P          PP
Sbjct: 890  AAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPP 949

Query: 69   -----------CNIPFPHAARGNVLIVGSH-------VLQHLDRKEPALPSAAESPGGL- 109
                        N+P P A +    +   H        LQ + + +P LPS+   P GL 
Sbjct: 950  HLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQP-LPSSPAQPPGLT 1008

Query: 110  ---GSPHRPVQHNPLSWGEAVPLGP-------PGDKPPAWP 140
                 P  P  H P    +  P  P       PG  PP  P
Sbjct: 1009 QSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITP 1049


>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 42/190 (22%), Positives = 65/190 (34%), Gaps = 28/190 (14%)

Query: 8   STEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSA--------PGPLSTPNT 59
           S++P  +     +     P P  N     S+   + L+    A        P P S P  
Sbjct: 698 SSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPG 757

Query: 60  APHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHN 119
            P  P P P         +G+                   P+A+++P    +P  PV H 
Sbjct: 758 TPQLPTPGPTPSATAVPPQGS-------------------PTASQAPNQPQAPTAPVPHT 798

Query: 120 PLSWGEAV-PLGPPGDKPPAWPARKQSLWGLSESSGQLGALCRRRTARKWRRPQLRRATK 178
            +    A+ P  PP   PP  P+    L  L+ S+GQ  A    +     + P    + +
Sbjct: 799 HIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQ 858

Query: 179 EGLTLQKTVP 188
            G  LQ   P
Sbjct: 859 AGPLLQHPGP 868



 Score = 36.6 bits (83), Expect = 0.020
 Identities = 35/106 (33%), Positives = 41/106 (38%), Gaps = 9/106 (8%)

Query: 11   PSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCN 70
            P+S P  G+  VA P PPF     +P   P        S     STP   P T   PPC+
Sbjct: 1017 PASHPPTGLHQVA-PQPPFAQHPFVPGGPPPITPPTCPST----STPPAGPGTSAQPPCS 1071

Query: 71   IPFPHAARGNVLIVGSHV-LQHLDRKEPALPSAAESPGGLGSPHRP 115
                 AA G  +  GS   L  +  KE AL  A E       P  P
Sbjct: 1072 ---GAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSP 1114



 Score = 34.3 bits (77), Expect = 0.10
 Identities = 38/155 (24%), Positives = 55/155 (35%), Gaps = 21/155 (13%)

Query: 2    AMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAP 61
            A+++        LP   +A     PPP      +P+ +  +    + S P P S     P
Sbjct: 906  ALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKH-PPHLSGPSPFSMNANLP 964

Query: 62   HTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGS----PHRPVQ 117
                PPP   P    +  +        LQ + + +P LPS+   P GL      P  P  
Sbjct: 965  ----PPPALKPLSSLSTHHPPSAHPPPLQLMPQSQP-LPSSPAQPPGLTQSQNLPPPPAS 1019

Query: 118  HNPLSWGEA-----------VPLGPPGDKPPAWPA 141
            H P    +            VP GPP   PP  P+
Sbjct: 1020 HPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPS 1054



 Score = 31.6 bits (70), Expect = 0.65
 Identities = 41/161 (25%), Positives = 55/161 (34%), Gaps = 42/161 (26%)

Query: 21   AVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPN--TAPHTPVP----------PP 68
            A A P    Q   S  + +  +  R     P PL+ P+    P TP+P          PP
Sbjct: 890  AAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPP 949

Query: 69   -----------CNIPFPHAARGNVLIVGSH-------VLQHLDRKEPALPSAAESPGGL- 109
                        N+P P A +    +   H        LQ + + +P LPS+   P GL 
Sbjct: 950  HLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQP-LPSSPAQPPGLT 1008

Query: 110  ---GSPHRPVQHNPLSWGEAVPLGP-------PGDKPPAWP 140
                 P  P  H P    +  P  P       PG  PP  P
Sbjct: 1009 QSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITP 1049


>gi|4503657 forkhead box H1 [Homo sapiens]
          Length = 365

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 50/168 (29%), Positives = 62/168 (36%), Gaps = 33/168 (19%)

Query: 25  PPPPFQNRRSIPS-------ARPSRQLRRNSSAPGPLSTPNTA----PHTPVP------- 66
           PPPP     SI S         P   L   SS P P  T N+     P  P+P       
Sbjct: 159 PPPPPSEGFSIKSLLGGSGEGAPWPGLAPQSS-PVPAGTGNSGEEAVPTPPLPSSERPLW 217

Query: 67  PPCNIPFPHAARGNVL---IVGSHVLQHLDRKEPA-LPSAAESPGGLGSP-HR------- 114
           P C +P P    G  +    +G   L    R  P  L      PGG  S  HR       
Sbjct: 218 PLCPLPGPTRVEGETVQGGAIGPSTLSPEPRAWPLHLLQGTAVPGGRSSGGHRASLWGQL 277

Query: 115 PVQHNPLSWGEAV-PLGPPGDKPPAWPARKQSLWGLS-ESSGQLGALC 160
           P  + P+     V PL PP    P  P+   + WG++ E+ G  G LC
Sbjct: 278 PTSYLPIYTPNVVMPLAPPPTSCPQCPSTSPAYWGVAPETRGPPGLLC 325


>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
           sapiens]
          Length = 1560

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 22/154 (14%)

Query: 11  PSSLPCVGIAAVAEPPPPFQ----NRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHT-PV 65
           P++ P  G    + P  P Q    +   +PS  P+R   R  S P  +S P + P   P 
Sbjct: 763 PAAAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPC 822

Query: 66  PPPCNIPFPHAARGNVLIVGSHVLQH-LDRKEPALPSAAESPGGLGSPHRPVQHNPLSWG 124
           PPP   P          + G  V+Q+ L    PA   A  +PG    P RP    P    
Sbjct: 823 PPPQAPP---------TLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEG-- 871

Query: 125 EAVPLGPPGDKPPAWPARKQSLWGLSESSGQLGA 158
              PL P    PP+  +   ++   SE+S +L A
Sbjct: 872 ---PLPPAPHLPPS--STSSAVASSSETSSRLPA 900



 Score = 34.3 bits (77), Expect = 0.10
 Identities = 35/125 (28%), Positives = 50/125 (40%), Gaps = 5/125 (4%)

Query: 26  PPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCNIPFP--HAARGNVLI 83
           P     + S+    P  + ++  SA GP  +   +     PPP   P P    A+G  L 
Sbjct: 687 PTAILTQDSLQMFLPQERSQQPLSAEGPHLSVPASVIVSAPPPAQDPAPATPVAKGAGLG 746

Query: 84  VGSHVLQHLDRKEPALPSAA--ESPGGLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWPA 141
             +   Q      P +P+AA  + PG   SP  P Q  PL     +P   P   P   P+
Sbjct: 747 PQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQ-APLGDSPHLPSPHPTRPPSRPPS 805

Query: 142 RKQSL 146
           R QS+
Sbjct: 806 RPQSV 810


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 32/107 (29%), Positives = 37/107 (34%), Gaps = 20/107 (18%)

Query: 45  RRNSSAPGPLSTPNTAPH---------TPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRK 95
           RR ++ P P   P  AP          TP PPP   P   AA                R 
Sbjct: 103 RRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARA-----------PRA 151

Query: 96  EPALPSAAESPGGLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWPAR 142
             A  +A  SPG      R  +  PL+     P  PP   PPA P R
Sbjct: 152 AAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRR 198



 Score = 36.2 bits (82), Expect = 0.027
 Identities = 39/139 (28%), Positives = 51/139 (36%), Gaps = 33/139 (23%)

Query: 11  PSSLPCVGIAAV-----AEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPV 65
           P   P    AA      A PPPP      + +A P+R       AP   +   TAP +P 
Sbjct: 115 PRGAPAAAAAAAPPPTPAPPPPP----APVAAAAPAR-------APRAAAAAATAPPSPG 163

Query: 66  PPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNPLSWGE 125
           P     P P A R   L               A P A  +P  +  P  P +  P +   
Sbjct: 164 PAQ---PGPRAQRAAPLA--------------APPPAPAAPPAVAPPAGPRRAPPPAVAA 206

Query: 126 AVPLGPPGDKPPAWPARKQ 144
             P  PP  +PPA P ++Q
Sbjct: 207 REPPLPPPPQPPAPPQQQQ 225


>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 42/133 (31%), Positives = 51/133 (38%), Gaps = 29/133 (21%)

Query: 25  PPPPFQNRRSIPSA-RPSRQLRRNSSAPGPLSTPNTAPHTPVPPPC--NIPFPHAARGNV 81
           PPPP  N+  +PS  RPS     +S AP P   P+     P+PP    N   P   + N+
Sbjct: 284 PPPPQNNKPPVPSTPRPS----ASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNL 339

Query: 82  LIVGSHVLQHLDRKEPALPSAAES----PGGLGSPHRPVQHNPLSWGEAVPLGPP----- 132
                     L    P LPS   S    P     P  PV+  P   G + PL PP     
Sbjct: 340 ---------SLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPP---GRSGPLPPPPPVSR 387

Query: 133 -GDKPPAWPARKQ 144
            G    A PA  Q
Sbjct: 388 NGSTSRALPATPQ 400



 Score = 36.6 bits (83), Expect = 0.020
 Identities = 44/153 (28%), Positives = 55/153 (35%), Gaps = 25/153 (16%)

Query: 11  PSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPN---TAPHT---- 63
           P   P       + PP P +NR  +P  RP    + +S  P   STP    ++PH     
Sbjct: 147 PGRFPVPSPGHRSGPPEPQRNR--MPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSP 204

Query: 64  --------PVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPAL--PSAAESPGGL---- 109
                   P P P   PFP   RG  L  GS     L    P    P    +P       
Sbjct: 205 PVPGGPRQPSPGPTPPPFP-GNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDK 263

Query: 110 -GSPHRPVQHNPLSWGEAVPLGPPGDKPPAWPA 141
              P  PV + P    EAVP  PP +  P  P+
Sbjct: 264 PPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPS 296



 Score = 30.4 bits (67), Expect = 1.5
 Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 33/129 (25%)

Query: 26  PPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCNIPFPHAARGNVLIVG 85
           PP  ++  + P + PS   R    +PG  S P       +PPP                 
Sbjct: 130 PPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPP----------------- 172

Query: 86  SHVLQHLDRKEPALPSAAES-PGGLGSPHRPVQHNPLSWGE-AVPLGP----PGDKPPAW 139
                      P + S  +S P  + S  RP+Q +P + G   VP GP    PG  PP +
Sbjct: 173 ----------RPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPF 222

Query: 140 PARKQSLWG 148
           P  + +  G
Sbjct: 223 PGNRGTALG 231


>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 42/133 (31%), Positives = 51/133 (38%), Gaps = 29/133 (21%)

Query: 25  PPPPFQNRRSIPSA-RPSRQLRRNSSAPGPLSTPNTAPHTPVPPPC--NIPFPHAARGNV 81
           PPPP  N+  +PS  RPS     +S AP P   P+     P+PP    N   P   + N+
Sbjct: 284 PPPPQNNKPPVPSTPRPS----ASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNL 339

Query: 82  LIVGSHVLQHLDRKEPALPSAAES----PGGLGSPHRPVQHNPLSWGEAVPLGPP----- 132
                     L    P LPS   S    P     P  PV+  P   G + PL PP     
Sbjct: 340 ---------SLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPP---GRSGPLPPPPPVSR 387

Query: 133 -GDKPPAWPARKQ 144
            G    A PA  Q
Sbjct: 388 NGSTSRALPATPQ 400



 Score = 36.6 bits (83), Expect = 0.020
 Identities = 44/153 (28%), Positives = 55/153 (35%), Gaps = 25/153 (16%)

Query: 11  PSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPN---TAPHT---- 63
           P   P       + PP P +NR  +P  RP    + +S  P   STP    ++PH     
Sbjct: 147 PGRFPVPSPGHRSGPPEPQRNR--MPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSP 204

Query: 64  --------PVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPAL--PSAAESPGGL---- 109
                   P P P   PFP   RG  L  GS     L    P    P    +P       
Sbjct: 205 PVPGGPRQPSPGPTPPPFP-GNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDK 263

Query: 110 -GSPHRPVQHNPLSWGEAVPLGPPGDKPPAWPA 141
              P  PV + P    EAVP  PP +  P  P+
Sbjct: 264 PPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPS 296



 Score = 30.4 bits (67), Expect = 1.5
 Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 33/129 (25%)

Query: 26  PPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCNIPFPHAARGNVLIVG 85
           PP  ++  + P + PS   R    +PG  S P       +PPP                 
Sbjct: 130 PPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPP----------------- 172

Query: 86  SHVLQHLDRKEPALPSAAES-PGGLGSPHRPVQHNPLSWGE-AVPLGP----PGDKPPAW 139
                      P + S  +S P  + S  RP+Q +P + G   VP GP    PG  PP +
Sbjct: 173 ----------RPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPF 222

Query: 140 PARKQSLWG 148
           P  + +  G
Sbjct: 223 PGNRGTALG 231


>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 251

 Score = 38.1 bits (87), Expect = 0.007
 Identities = 38/114 (33%), Positives = 47/114 (41%), Gaps = 19/114 (16%)

Query: 45  RRNSSAPGPLSTPNTAPHTPVPPPC-NIPFPHAARGNVLIVGS----HVLQHLDRKEPAL 99
           R +S APG   TP T   +P PP C   P P  A+  V   G+        H  R  PAL
Sbjct: 21  RHSSRAPGT-RTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPAR--PAL 77

Query: 100 PSAAESPGGLG----------SPHRPVQHNPLSWGEAVPLGPPGDKPPAWPARK 143
                +PG  G          S   P+ H PL  G  +  G PG  PP  P+R+
Sbjct: 78  RGETPAPGRRGRATTRGEVQPSVRPPLSHRPLR-GGGMGRGRPGKGPPPNPSRR 130


>gi|239758167 PREDICTED: hypothetical protein XP_002346321 [Homo
           sapiens]
          Length = 271

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 43/130 (33%), Positives = 54/130 (41%), Gaps = 14/130 (10%)

Query: 15  PCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCNIPFP 74
           P + ++    P P  +  +SI  +RP R +R     PGP      AP       C  P P
Sbjct: 91  PALPVSVAVPPCPACRGPQSISRSRPRRAVR---PRPGPWP---AAPSRGPVRSCRGPRP 144

Query: 75  HAARGN---VLIVGS-HVLQHLDRKEPALPSAAE---SPGGLGSPHRPVQHNPLSWGEAV 127
             A G+   VL  GS    Q       A PSA E   S  GLGSP    + N  +  E+ 
Sbjct: 145 GRALGSLPLVLPAGSCGSCQEDSLGNQARPSALEIGASGVGLGSPAPSNRRNRYAPPES- 203

Query: 128 PLGPPGDKPP 137
           P G P  KPP
Sbjct: 204 PKGSPSAKPP 213



 Score = 32.0 bits (71), Expect = 0.50
 Identities = 40/163 (24%), Positives = 52/163 (31%), Gaps = 26/163 (15%)

Query: 36  PSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRK 95
           PS +PS Q  R+   P  L     AP   +P    +P   A RG   I  S         
Sbjct: 64  PSLKPSAQCVRSPGVPRSLGGLCRAPDPALPVSVAVPPCPACRGPQSISRSR-------- 115

Query: 96  EPALPSAAESPGGLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQ 155
                           P R V+  P  W  A   GP        P R      L   +G 
Sbjct: 116 ----------------PRRAVRPRPGPWPAAPSRGPVRSCRGPRPGRALGSLPLVLPAGS 159

Query: 156 LGALCRRRTARKWRRPQLRRATKEGLTLQKTVPDLRHRRQYSP 198
            G+ C+  +     RP        G+ L    P  R R +Y+P
Sbjct: 160 CGS-CQEDSLGNQARPSALEIGASGVGLGSPAPSNR-RNRYAP 200



 Score = 28.1 bits (61), Expect = 7.2
 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 12/73 (16%)

Query: 11  PSSLPCVGIAAVAEPPPPFQNRRS----------IPSARPSRQLRRNSSAPGPLSTPNTA 60
           PS+L  +G + V    P   NRR+           PSA+P R      SA  P STP   
Sbjct: 174 PSALE-IGASGVGLGSPAPSNRRNRYAPPESPKGSPSAKPPRACSDTFSARQPASTPKAL 232

Query: 61  P-HTPVPPPCNIP 72
           P   P  P   +P
Sbjct: 233 PGGCPGDPELGLP 245


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 18/112 (16%)

Query: 5    TDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTP 64
            T ++ EPSS P     +   PP P   R   P ARP        + P P   P      P
Sbjct: 2360 TPLALEPSSTP----GSKKSPPEPVDKRAKAPKARP--------APPQPSPAPPAFTSCP 2407

Query: 65   VPPP-CNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRP 115
             P P   +P P  +    L     +     R +P    AAE  G  G P RP
Sbjct: 2408 APEPFAELPAPATS----LAPAPLITMPATRPKPKKARAAEESGAKG-PRRP 2454


>gi|241982780 programmed cell death 6 interacting protein isoform 2
           [Homo sapiens]
          Length = 873

 Score = 37.4 bits (85), Expect = 0.012
 Identities = 36/148 (24%), Positives = 54/148 (36%), Gaps = 42/148 (28%)

Query: 5   TDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTP 64
           T  +  P ++P       A PPPP       PSA     +   ++AP P  TP +AP   
Sbjct: 743 TPPTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGTAAPAPSQTPGSAP--- 799

Query: 65  VPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNPLSWG 124
                    P  A+G                 P  P+    PG    P  P+ +NP ++G
Sbjct: 800 ---------PPQAQG-----------------PPYPTYPGYPGYCQMP-MPMGYNPYAYG 832

Query: 125 E-AVPLGP-----------PGDKPPAWP 140
           +  +P  P           PG + P++P
Sbjct: 833 QYNMPYPPVYHQSPGQAPYPGPQQPSYP 860


>gi|22027538 programmed cell death 6 interacting protein isoform 1
           [Homo sapiens]
          Length = 868

 Score = 37.4 bits (85), Expect = 0.012
 Identities = 36/148 (24%), Positives = 54/148 (36%), Gaps = 42/148 (28%)

Query: 5   TDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTP 64
           T  +  P ++P       A PPPP       PSA     +   ++AP P  TP +AP   
Sbjct: 738 TPPTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGTAAPAPSQTPGSAP--- 794

Query: 65  VPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQHNPLSWG 124
                    P  A+G                 P  P+    PG    P  P+ +NP ++G
Sbjct: 795 ---------PPQAQG-----------------PPYPTYPGYPGYCQMP-MPMGYNPYAYG 827

Query: 125 E-AVPLGP-----------PGDKPPAWP 140
           +  +P  P           PG + P++P
Sbjct: 828 QYNMPYPPVYHQSPGQAPYPGPQQPSYP 855


>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
          Length = 1499

 Score = 37.4 bits (85), Expect = 0.012
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 17/141 (12%)

Query: 2    AMRTDVSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSA---PGPLSTPN 58
            A++T  +++   LP   +  +  PPPP  +   I +++PS Q+  NS+A   P  ++ P 
Sbjct: 1106 AIKTIATSDDELLPDRPL--LPPPPPPQGSGPGISNSQPS-QMHLNSAAAQSPMGMNLPG 1162

Query: 59   TAPHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRK---EPALPSAAESPGGLGSPHRP 115
              P +  PPP  +P P         +GS++  H + +    P   S   +PGG  S + P
Sbjct: 1163 QQPLSHEPPPAMLPSPTP-------LGSNIPLHPNAQGTGGPPQNSMMMAPGGPDSLNAP 1215

Query: 116  VQHNPLSWGEAVPLGPPGDKP 136
                P S  + +P  P   +P
Sbjct: 1216 CGPVPSS-SQMMPFPPRLQQP 1235



 Score = 28.5 bits (62), Expect = 5.5
 Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 8/93 (8%)

Query: 51  PGPLSTPNTAPHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPS---AAESPG 107
           P PLSTP+       PPP   P P  A G+            D  +   P+   AA + G
Sbjct: 288 PLPLSTPSAGTPQSQPPPLPPP-PPPAPGSAPPALPPEGPPEDSSQDLAPNSVGAASTGG 346

Query: 108 GLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWP 140
           G G  H    + P +     PL PPG  P + P
Sbjct: 347 GTGGTH---PNTPTATTANNPL-PPGGDPSSAP 375


>gi|146134388 YLP motif containing 1 [Homo sapiens]
          Length = 2146

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 17/43 (39%), Positives = 21/43 (48%)

Query: 26   PPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPP 68
            PPP   R   P  +P   + R S+ P   S P T P  P+PPP
Sbjct: 1507 PPPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPP 1549



 Score = 34.3 bits (77), Expect = 0.10
 Identities = 42/140 (30%), Positives = 53/140 (37%), Gaps = 11/140 (7%)

Query: 6    DVSTEPSSLPCVGIAAVAEPPPPFQNRRSI--PSARPSRQLRRNSSAPGPLSTPNTAPHT 63
            + S+ P   P  G  +   PPP  +   SI  PSA P+R     +  P P+  P   P  
Sbjct: 1498 NTSSRPGMYPPPG--SYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPPPL 1555

Query: 64   PVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAES-----PGGLGSPHRPVQH 118
            P PPP   P   A         S         E  L S  +S     P     P  PV H
Sbjct: 1556 PPPPPVIKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFKSETAAIPSAPVLPPPPV-H 1614

Query: 119  NPLSWGEAVPLG-PPGDKPP 137
            + +     VP+G PP  KPP
Sbjct: 1615 SSIPPPGPVPMGMPPMSKPP 1634


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 36.6 bits (83), Expect = 0.020
 Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 4/67 (5%)

Query: 10    EPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPC 69
             EP  L  V   AV EPPPP    + +         +R    P P   P   P  P+P P 
Sbjct: 10965 EPKKLEKVKKPAVPEPPPP----KPVEEVEVPTVTKRERKIPEPTKVPEIKPAIPLPAPE 11020

Query: 70    NIPFPHA 76
               P P A
Sbjct: 11021 PKPKPEA 11027


>gi|110349717 titin isoform novex-2 [Homo sapiens]
          Length = 27118

 Score = 36.6 bits (83), Expect = 0.020
 Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 4/67 (5%)

Query: 10   EPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPC 69
            EP  L  V   AV EPPPP    + +         +R    P P   P   P  P+P P 
Sbjct: 4660 EPKKLEKVKKPAVPEPPPP----KPVEEVEVPTVTKRERKIPEPTKVPEIKPAIPLPAPE 4715

Query: 70   NIPFPHA 76
              P P A
Sbjct: 4716 PKPKPEA 4722


>gi|110349713 titin isoform novex-1 [Homo sapiens]
          Length = 27051

 Score = 36.6 bits (83), Expect = 0.020
 Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 4/67 (5%)

Query: 10   EPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPC 69
            EP  L  V   AV EPPPP    + +         +R    P P   P   P  P+P P 
Sbjct: 4593 EPKKLEKVKKPAVPEPPPP----KPVEEVEVPTVTKRERKIPEPTKVPEIKPAIPLPAPE 4648

Query: 70   NIPFPHA 76
              P P A
Sbjct: 4649 PKPKPEA 4655


>gi|110349715 titin isoform N2-B [Homo sapiens]
          Length = 26926

 Score = 36.6 bits (83), Expect = 0.020
 Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 4/67 (5%)

Query: 10   EPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPC 69
            EP  L  V   AV EPPPP    + +         +R    P P   P   P  P+P P 
Sbjct: 4468 EPKKLEKVKKPAVPEPPPP----KPVEEVEVPTVTKRERKIPEPTKVPEIKPAIPLPAPE 4523

Query: 70   NIPFPHA 76
              P P A
Sbjct: 4524 PKPKPEA 4530


>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
          Length = 1838

 Score = 36.6 bits (83), Expect = 0.020
 Identities = 38/149 (25%), Positives = 46/149 (30%), Gaps = 21/149 (14%)

Query: 10   EPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPPPC 69
            EP      G+     PP P   R     + PS      +  PGP   P        P P 
Sbjct: 1286 EPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGA----AGPPGPKGPPGDDGPKGSPGPV 1341

Query: 70   NIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQH-NPLSWGEAVP 128
              P      G                EP        PG  G    P Q  +P   GE  P
Sbjct: 1342 GFPGDPGPPG----------------EPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGP 1385

Query: 129  LGPPGDKPPAWPARKQSLWGLSESSGQLG 157
             GPPG + P  PA  +   G   + G+ G
Sbjct: 1386 SGPPGKRGPPGPAGPEGRQGEKGAKGEAG 1414



 Score = 33.1 bits (74), Expect = 0.22
 Identities = 28/107 (26%), Positives = 36/107 (33%), Gaps = 18/107 (16%)

Query: 51  PGPLSTPNTAPHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLG 110
           PGPL  P       VP     P     +G++               P  P A    GG G
Sbjct: 855 PGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGF-------------PGFPGANGEKGGRG 901

Query: 111 SPHRPVQHNPLSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLG 157
           +P +P        G+  P GP G++ P     K    G S   G  G
Sbjct: 902 TPGKPGPR-----GQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAG 943



 Score = 30.0 bits (66), Expect = 1.9
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 97   PALPSAAESPGGLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWPARKQSLWG 148
            P     A + G +G P RP    P   G A   G PG+K P  PA +  L G
Sbjct: 1089 PGERGPAGAAGPIGIPGRPGPQGPP--GPAGEKGAPGEKGPQGPAGRDGLQG 1138



 Score = 27.7 bits (60), Expect = 9.4
 Identities = 34/119 (28%), Positives = 39/119 (32%), Gaps = 22/119 (18%)

Query: 47   NSSAPGPLSTPN----TAPHTPV--PPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALP 100
            NS   GP   P       P  P   P P   P P    G    +  H  Q   R E    
Sbjct: 935  NSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDG----LPGHPGQ---RGETGFQ 987

Query: 101  SAAESPG--GLGSPHRPVQHNPLSWGEAVPLGPPGDKPPAWPARKQSLWGLSESSGQLG 157
                 PG  G+  P  P        GE  P+G  G   P  P  +Q L GL+   G  G
Sbjct: 988  GKTGPPGPPGVVGPQGPT-------GETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKG 1039


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 36.6 bits (83), Expect = 0.020
 Identities = 41/142 (28%), Positives = 55/142 (38%), Gaps = 18/142 (12%)

Query: 11  PSSLPCVGIAAVAEPPP------PFQNRRS---IPSARPSRQLRRNSSAPGPLSTPNTAP 61
           P++L    + A   PPP      PF    S    PSA P  Q   + +AP PL  P + P
Sbjct: 428 PNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAP-PLQVPPSPP 486

Query: 62  HTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQ---H 118
            +P   P   P P A       + +  LQ L +  P  P A  +P     P  P      
Sbjct: 487 ASPPMSPSATPPPQAPPP----LAAPPLQ-LAKPPPQAPPALATPPLQALPSPPASFPGQ 541

Query: 119 NPLSWGEAVPLGPPGDKPPAWP 140
            P S   ++P+ P    PP  P
Sbjct: 542 APFSPSASLPMSPLATPPPQAP 563



 Score = 30.4 bits (67), Expect = 1.5
 Identities = 29/139 (20%), Positives = 49/139 (35%), Gaps = 17/139 (12%)

Query: 7   VSTEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPN-------- 58
           +S+ P + P    A  ++ PP      ++P+   S  L    + P PL+ P+        
Sbjct: 299 LSSSPLATPSPSAALQSQAPP------TLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQ 352

Query: 59  TAPHTPVPPPCNIPFPHAARGNVLIVGSHVLQHLDRKEPALPSAAESPGGLGSPHRPVQH 118
           T P  P  PP        + G+  +  +H         P      ++P  L  P      
Sbjct: 353 TLPSPPATPPSQAT---TSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPP 409

Query: 119 NPLSWGEAVPLGPPGDKPP 137
           +P +     PL  P  + P
Sbjct: 410 SPPASPPLSPLATPSPQAP 428



 Score = 28.1 bits (61), Expect = 7.2
 Identities = 19/61 (31%), Positives = 25/61 (40%)

Query: 8   STEPSSLPCVGIAAVAEPPPPFQNRRSIPSARPSRQLRRNSSAPGPLSTPNTAPHTPVPP 67
           +T P S P  G    A         R   S R  R     +++PGP+S+P  A  T  P 
Sbjct: 68  ATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPG 127

Query: 68  P 68
           P
Sbjct: 128 P 128


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.134    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,088,445
Number of Sequences: 37866
Number of extensions: 867788
Number of successful extensions: 6806
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 557
Number of HSP's that attempted gapping in prelim test: 5326
Number of HSP's gapped (non-prelim): 1826
length of query: 243
length of database: 18,247,518
effective HSP length: 99
effective length of query: 144
effective length of database: 14,498,784
effective search space: 2087824896
effective search space used: 2087824896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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