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Search of human proteins with 239513938
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239513938 PREDICTED: hypothetical protein [Homo sapiens]
(454 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754267 PREDICTED: hypothetical protein [Homo sapiens] 816 0.0
gi|239740672 PREDICTED: hypothetical protein [Homo sapiens] 816 0.0
gi|239513938 PREDICTED: hypothetical protein [Homo sapiens] 816 0.0
gi|239742842 PREDICTED: hypothetical protein XP_002342660 [Homo ... 814 0.0
gi|239740775 PREDICTED: hypothetical protein [Homo sapiens] 813 0.0
gi|239740825 PREDICTED: hypothetical protein XP_002344066 [Homo ... 730 0.0
gi|239749916 PREDICTED: hypothetical protein XP_002347212 [Homo ... 102 9e-22
gi|239744219 PREDICTED: hypothetical protein XP_002343076 [Homo ... 100 3e-21
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 43 7e-04
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 43 7e-04
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 39 0.007
gi|24308527 stereocilin [Homo sapiens] 37 0.037
gi|46048439 N-acetyltransferase 6 [Homo sapiens] 35 0.18
gi|58761535 zinc finger protein 518B [Homo sapiens] 34 0.31
gi|221139761 zinc finger protein 853 [Homo sapiens] 33 0.41
gi|110349719 titin isoform N2-A [Homo sapiens] 32 1.6
gi|33239440 zinc finger protein, Y-linked isoform 1 [Homo sapiens] 31 2.0
gi|223717965 zinc finger protein, Y-linked isoform 2 [Homo sapiens] 31 2.0
gi|239755210 PREDICTED: hypothetical protein [Homo sapiens] 30 3.5
gi|169205253 PREDICTED: hypothetical protein [Homo sapiens] 30 3.5
gi|239749699 PREDICTED: hypothetical protein XP_002347122 [Homo ... 30 3.5
gi|239743965 PREDICTED: hypothetical protein XP_002344250 [Homo ... 30 3.5
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 30 3.5
gi|38488767 microtubule associated serine/threonine kinase famil... 30 4.5
gi|4885615 signal transducer and activator of transcription 2 [H... 30 5.9
gi|55749742 HEAT repeat containing 5B [Homo sapiens] 30 5.9
gi|28372551 bactericidal/permeability-increasing protein-like 2 ... 29 7.7
gi|15619008 vacuolar protein sorting 13A isoform B [Homo sapiens] 29 7.7
gi|66346676 vacuolar protein sorting 13A isoform D [Homo sapiens] 29 7.7
gi|66346674 vacuolar protein sorting 13A isoform A [Homo sapiens] 29 7.7
>gi|239754267 PREDICTED: hypothetical protein [Homo sapiens]
Length = 454
Score = 816 bits (2107), Expect = 0.0
Identities = 454/454 (100%), Positives = 454/454 (100%)
Query: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS
Sbjct: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
Query: 61 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDP 120
ELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDP
Sbjct: 61 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDP 120
Query: 121 ELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDS 180
ELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDS
Sbjct: 121 ELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDS 180
Query: 181 ELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDS 240
ELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDS
Sbjct: 181 ELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDS 240
Query: 241 ELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDS 300
ELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDS
Sbjct: 241 ELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDS 300
Query: 301 ELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDS 360
ELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDS
Sbjct: 301 ELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDS 360
Query: 361 ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 420
ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP
Sbjct: 361 ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 420
Query: 421 EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE 454
EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE
Sbjct: 421 EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE 454
>gi|239740672 PREDICTED: hypothetical protein [Homo sapiens]
Length = 454
Score = 816 bits (2107), Expect = 0.0
Identities = 454/454 (100%), Positives = 454/454 (100%)
Query: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS
Sbjct: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
Query: 61 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDP 120
ELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDP
Sbjct: 61 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDP 120
Query: 121 ELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDS 180
ELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDS
Sbjct: 121 ELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDS 180
Query: 181 ELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDS 240
ELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDS
Sbjct: 181 ELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDS 240
Query: 241 ELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDS 300
ELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDS
Sbjct: 241 ELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDS 300
Query: 301 ELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDS 360
ELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDS
Sbjct: 301 ELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDS 360
Query: 361 ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 420
ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP
Sbjct: 361 ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 420
Query: 421 EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE 454
EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE
Sbjct: 421 EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE 454
>gi|239513938 PREDICTED: hypothetical protein [Homo sapiens]
Length = 454
Score = 816 bits (2107), Expect = 0.0
Identities = 454/454 (100%), Positives = 454/454 (100%)
Query: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS
Sbjct: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
Query: 61 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDP 120
ELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDP
Sbjct: 61 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDP 120
Query: 121 ELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDS 180
ELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDS
Sbjct: 121 ELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDS 180
Query: 181 ELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDS 240
ELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDS
Sbjct: 181 ELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDS 240
Query: 241 ELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDS 300
ELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDS
Sbjct: 241 ELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDS 300
Query: 301 ELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDS 360
ELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDS
Sbjct: 301 ELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDS 360
Query: 361 ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 420
ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP
Sbjct: 361 ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 420
Query: 421 EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE 454
EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE
Sbjct: 421 EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE 454
>gi|239742842 PREDICTED: hypothetical protein XP_002342660 [Homo
sapiens]
Length = 454
Score = 814 bits (2103), Expect = 0.0
Identities = 453/454 (99%), Positives = 453/454 (99%)
Query: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS
Sbjct: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
Query: 61 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDP 120
ELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDP
Sbjct: 61 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDP 120
Query: 121 ELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDS 180
ELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDS
Sbjct: 121 ELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDS 180
Query: 181 ELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDS 240
ELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDS
Sbjct: 181 ELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDS 240
Query: 241 ELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDS 300
ELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDS
Sbjct: 241 ELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDS 300
Query: 301 ELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDS 360
ELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDS
Sbjct: 301 ELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDS 360
Query: 361 ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 420
ELVAVLAPLEVVLDSELVAMLIPLD VLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP
Sbjct: 361 ELVAVLAPLEVVLDSELVAMLIPLDTVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 420
Query: 421 EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE 454
EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE
Sbjct: 421 EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE 454
>gi|239740775 PREDICTED: hypothetical protein [Homo sapiens]
Length = 454
Score = 813 bits (2099), Expect = 0.0
Identities = 452/454 (99%), Positives = 452/454 (99%)
Query: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS
Sbjct: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
Query: 61 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDP 120
ELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDP
Sbjct: 61 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDP 120
Query: 121 ELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDS 180
ELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDS
Sbjct: 121 ELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDS 180
Query: 181 ELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDS 240
ELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDS
Sbjct: 181 ELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDS 240
Query: 241 ELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDS 300
ELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDS
Sbjct: 241 ELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDS 300
Query: 301 ELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDS 360
ELV VLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDS
Sbjct: 301 ELVTVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDS 360
Query: 361 ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 420
ELVAVLAPLEVVLDSELVAMLIPLD VLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP
Sbjct: 361 ELVAVLAPLEVVLDSELVAMLIPLDTVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 420
Query: 421 EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE 454
EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE
Sbjct: 421 EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE 454
>gi|239740825 PREDICTED: hypothetical protein XP_002344066 [Homo
sapiens]
Length = 514
Score = 730 bits (1885), Expect = 0.0
Identities = 428/514 (83%), Positives = 437/514 (85%), Gaps = 60/514 (11%)
Query: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS
Sbjct: 1 MRKISHGTRDPPGFASLTAVDALWEVVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDS 60
Query: 61 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDP 120
ELV VL PLDTVLDSELVAVLA LEVVL+SE+VAVLAPL+ VLDSELVAVL PLEVVLD
Sbjct: 61 ELVTVLIPLDTVLDSELVAVLASLEVVLESELVAVLAPLEVVLDSELVAVLTPLEVVLDS 120
Query: 121 ELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVL------------------------ 156
ELVAVLAPL+ VLDSELVAVLAPLEVVLDSELVAVL
Sbjct: 121 ELVAVLAPLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDS 180
Query: 157 ------APLEVVLESELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDS 210
APLEVVLESELVAVLAPLEVVLDSELVAVLAPLE VLDSELV V PL+ VL+S
Sbjct: 181 ELVAVPAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLES 240
Query: 211 ELVAVPAPLEVVLDSELVAVPAPLEGVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLDS 270
ELVAV APLEVVLDSELVAV APL+ VL+SELVAVLAPLEVVLDSELVAVPAPLEVVLDS
Sbjct: 241 ELVAVLAPLEVVLDSELVAVLAPLDTVLESELVAVLAPLEVVLDSELVAVPAPLEVVLDS 300
Query: 271 ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLASLEVVLES 330
ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLA LEVVLES
Sbjct: 301 ELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLES 360
Query: 331 ELVAVLAPLEVVLESELVA------------------------------VLAPLEGVLDS 360
ELVAVLAPLE VL+SELVA VLAPLEGVLDS
Sbjct: 361 ELVAVLAPLESVLDSELVAVLALLDTVLDSELVAVLAPLEVTLDPELVTVLAPLEGVLDS 420
Query: 361 ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 420
ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP
Sbjct: 421 ELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDP 480
Query: 421 EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE 454
EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE
Sbjct: 481 EMVAVLTPLEVTLDPELVAVLAPLEITLDPVLAE 514
>gi|239749916 PREDICTED: hypothetical protein XP_002347212 [Homo
sapiens]
Length = 391
Score = 102 bits (253), Expect = 9e-22
Identities = 114/310 (36%), Positives = 168/310 (54%), Gaps = 27/310 (8%)
Query: 47 LVAVLAPLEVVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSE 106
LV VL L VV+ + LV V+ P V+ S L V+ L V++ +V V+ L V+ S
Sbjct: 55 LVVVLTSL-VVVTTSLVMVITPPFAVITS-LGVVITSLVVIITC-LVLVITALGVVITS- 110
Query: 107 LVAVLVPLEVVLDPELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESE 166
L V+ L +V+ P LVAV+ PL VV+ S LV V+ L +V+ S V + + + V+ +
Sbjct: 111 LGVVVTSLVMVITP-LVAVITPLGVVITS-LVVVITSLVMVITSLTVVITSSIVVI--TP 166
Query: 167 LVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAP--LEVVLD 224
LV V+ L V++ S L V+ PL V+ + L+ V L VL + +V+ P L
Sbjct: 167 LVMVITSLTVIITS-LFVVITPLVMVI-TFLIVVNTSLVVVLITLIVSPPPSLWLSAPCI 224
Query: 225 SELVAVPAPLEGVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLD 284
+ L V PL V+ S L+ V+ L VVL + +V P+ + V+ S LV V+A L VV
Sbjct: 225 TSLFVVIIPLVVVITS-LIVVITSLVVVLIAVIVVTPSLIVVI--SSLVVVIASLVVVFI 281
Query: 285 SELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLE 344
S +V + S L+ V+ L VV+ S LV V+ SL VV+ S LV V+ L VV+
Sbjct: 282 SLIVVI---------SSLIVVITSLVVVITS-LVVVITSLIVVITS-LVVVITSLVVVIT 330
Query: 345 SELVAVLAPL 354
S L+ V+ PL
Sbjct: 331 S-LIVVIIPL 339
Score = 68.9 bits (167), Expect = 9e-12
Identities = 86/246 (34%), Positives = 131/246 (53%), Gaps = 29/246 (11%)
Query: 207 VLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDSELVAVLAPLEVVLDSELVAVPAPLEV 266
++ S L L VV+ S +V + + + V+ + LV V+ L VV+ S +A+ A L V
Sbjct: 1 MVTSSLTVAITSLVVVITSLVVIITSFV--VVTTSLVVVITSLVVVITSIAIAI-ATLVV 57
Query: 267 VLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLASLEV 326
VL S LV V L +V+ AV+ L V+ S LV ++ L +V+ + L V+ SL V
Sbjct: 58 VLTS-LVVVTTSLVMVITPPF-AVITSLGVVITS-LVVIITCLVLVITA-LGVVITSLGV 113
Query: 327 VLESELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAVLAPLEVVLDSELVAMLIPLDA 386
V+ S LV V+ PL VAV+ PL GV+ + LV V+ L +V+ S L
Sbjct: 114 VVTS-LVMVITPL--------VAVITPL-GVVITSLVVVITSLVMVITS--------LTV 155
Query: 387 VLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLDPELVAVLAPLEI 446
V+ S +V V+ PL +V S L ++T L V + P +V V+T L + ++ LV VL L +
Sbjct: 156 VITSSIV-VITPLVMVITS-LTVIITSLFVVITP-LVMVITFL-IVVNTSLVVVLITLIV 211
Query: 447 TLDPVL 452
+ P L
Sbjct: 212 SPPPSL 217
>gi|239744219 PREDICTED: hypothetical protein XP_002343076 [Homo
sapiens]
Length = 398
Score = 100 bits (249), Expect = 3e-21
Identities = 113/309 (36%), Positives = 167/309 (54%), Gaps = 27/309 (8%)
Query: 48 VAVLAPLEVVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSEL 107
V VL L VV+ + LV V+ P V+ S L V+ L V++ +V V+ L V+ S L
Sbjct: 63 VVVLTSL-VVVTTSLVMVITPPFAVITS-LGVVITSLVVIITC-LVLVITALGVVITS-L 118
Query: 108 VAVLVPLEVVLDPELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESEL 167
V+ L +V+ P LVAV+ PL VV+ S LV V+ L +V+ S V + + + V+ + L
Sbjct: 119 GVVVTSLVMVITP-LVAVITPLGVVITS-LVVVITSLVMVITSLTVVITSSIVVI--TPL 174
Query: 168 VAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAP--LEVVLDS 225
V V+ L V++ S L V+ PL V+ + L+ V L VL + +V+ P L +
Sbjct: 175 VMVITSLTVIITS-LFVVITPLVMVI-TFLIVVNTSLVVVLITLIVSPPPSLWLSAPCIT 232
Query: 226 ELVAVPAPLEGVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDS 285
L V PL V+ S L+ V+ L VVL + +V P+ + V+ S LV V+A L VV S
Sbjct: 233 SLFVVIIPLVVVITS-LIVVITSLVVVLIAVIVVTPSLIVVI--SSLVVVIASLVVVFIS 289
Query: 286 ELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLES 345
+V + S L+ V+ L VV+ S LV V+ SL VV+ S LV V+ L VV+ S
Sbjct: 290 LIVVI---------SSLIVVITSLVVVITS-LVVVITSLIVVITS-LVVVITSLVVVITS 338
Query: 346 ELVAVLAPL 354
L+ V+ PL
Sbjct: 339 -LIVVIIPL 346
Score = 78.2 bits (191), Expect = 1e-14
Identities = 90/247 (36%), Positives = 127/247 (51%), Gaps = 32/247 (12%)
Query: 47 LVAVLAPLEVVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSE 106
LVAV+ PL VV+ S +V + + LV V+ L VV+ S +V V+ PL V+ S
Sbjct: 132 LVAVITPLGVVITSLVVVI---------TSLVMVITSLTVVITSSIV-VITPLVMVITS- 180
Query: 107 LVAVLVPLEVVLDPELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESE 166
L ++ L VV+ P LV V+ L +V+++ LV VL L V L L +
Sbjct: 181 LTVIITSLFVVITP-LVMVITFL-IVVNTSLVVVLITLIVSPPPSLW-----LSAPCITS 233
Query: 167 LVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSE 226
L V+ PL VV+ S L+ V+ L VL + V V+ P V+ S LV V A L VV S
Sbjct: 234 LFVVIIPLVVVITS-LIVVITSLVVVLIA--VIVVTPSLIVVISSLVVVIASLVVVFISL 290
Query: 227 LVAVPAPLEGVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSE 286
+V + S L+ V+ L VV+ S LV V L VV+ S LV V+ L VV+ S
Sbjct: 291 IVVI---------SSLIVVITSLVVVITS-LVVVITSLIVVITS-LVVVITSLVVVITSL 339
Query: 287 LVAVLAL 293
+V ++ L
Sbjct: 340 IVVIIPL 346
Score = 67.8 bits (164), Expect = 2e-11
Identities = 85/246 (34%), Positives = 133/246 (54%), Gaps = 22/246 (8%)
Query: 207 VLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDSELVAVLAPLEVVLDSELVAVPAPLEV 266
++ S L L VV+ S +V + + + V+ + LV V+ L VV+ S +A+ A L V
Sbjct: 1 MVTSSLTVAITSLVVVITSLVVIITSFV--VVTTSLVVVITSLVVVITSIAIAI-ATLVV 57
Query: 267 VLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLASLEV 326
VL +V VL L VV+ + LV V+ V+ S L V+ L V++ LV V+ +L V
Sbjct: 58 VLTFTVV-VLTSL-VVVTTSLVMVITPPFAVITS-LGVVITSLVVIITC-LVLVITALGV 113
Query: 327 VLESELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAVLAPLEVVLDSELVAMLIPLDA 386
V+ S V V + + V+ + LVAV+ PL GV+ + LV V+ L +V+ S L
Sbjct: 114 VITSLGVVVTSLVMVI--TPLVAVITPL-GVVITSLVVVITSLVMVITS--------LTV 162
Query: 387 VLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLDPELVAVLAPLEI 446
V+ S +V V+ PL +V S L ++T L V + P +V V+T L + ++ LV VL L +
Sbjct: 163 VITSSIV-VITPLVMVITS-LTVIITSLFVVITP-LVMVITFL-IVVNTSLVVVLITLIV 218
Query: 447 TLDPVL 452
+ P L
Sbjct: 219 SPPPSL 224
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 42.7 bits (99), Expect = 7e-04
Identities = 71/240 (29%), Positives = 105/240 (43%), Gaps = 22/240 (9%)
Query: 35 VPEPAEVTLDPELVAVLAPLE--VVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDSEV 92
VPEP +PE L P+E VV + V P+ T + SE A+ A VL SE
Sbjct: 1248 VPEPPP---EPESSITLTPVESAVVAEEHEVVPERPV-TCMVSETPAMSAE-PTVLASEP 1302
Query: 93 VAVLAPLDTVLDSELVAVLVPLEVVLDPELVAVLAPLEVVLDSELVAVLAPLEVVLDSEL 152
+ +T DS + V EV + AV P+ E A+ AP +S
Sbjct: 1303 PVMSETAET-FDSMRASGHVASEVSTSLLVPAVTTPVLAESILEPPAMAAP-----ESSA 1356
Query: 153 VAVLAPLEV-VLESELVAVLAPLEV-VLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDS 210
+AVL V VLES V VL V VL+ +V V P V + + VT+ +P+ + L+
Sbjct: 1357 MAVLESSAVTVLESSTVTVLESSTVTVLEPSVVTVPEP-PVVAEPDYVTIPVPVVSALEP 1415
Query: 211 ELVAVPAPLEVVLDSELVAVPAPLEGVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLDS 270
+ + + V+ S +V+ P+ + V V P V + V P EV ++S
Sbjct: 1416 SVPVLEPAVSVLQPSMIVSEPSV---SVQESTVTVSEPAVTVSEQTQV---IPTEVAIES 1469
Score = 34.7 bits (78), Expect = 0.18
Identities = 49/254 (19%), Positives = 119/254 (46%), Gaps = 40/254 (15%)
Query: 131 VVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLES-ELVAVLAPLEVVLDSELVA----V 185
V L+ + +V+ E+ + ++ P LES VA P +V ++ + +
Sbjct: 649 VALEISVQSVVTTSELSTMTVSQSLEVPSTTALESYNTVAQELPTTLVGETSVTVGVDPL 708
Query: 186 LAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDSELVAV 245
+AP +L S + I +DS+++A +DS+++A +DS+++A
Sbjct: 709 MAPESHILASNTMETHILASNTMDSQMLA-----SNTMDSQMLA-----SNTMDSQMLA- 757
Query: 246 LAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAV 305
+DS+++A + +DS+++A + +L + + L + +DS+++A
Sbjct: 758 ----SSTMDSQMLATSS-----MDSQMLATSSMDSQMLATSTMDSQMLATSSMDSQMLAT 808
Query: 306 LAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAV 365
+ +DS+++A + ++S+++A + +L + + +DS+++A
Sbjct: 809 SS-----MDSQMLATSS-----MDSQMLATSSMDSQMLATSTMDSQMLATSTMDSQMLAT 858
Query: 366 LAPLEVVLDSELVA 379
+ +DS+++A
Sbjct: 859 SS-----MDSQMLA 867
Score = 34.7 bits (78), Expect = 0.18
Identities = 64/223 (28%), Positives = 90/223 (40%), Gaps = 25/223 (11%)
Query: 229 AVPAPLEGVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELV 288
+V A VL SE + +S + P VV + V P+ ++ SE
Sbjct: 1231 SVSASDPSVLVSEAAVTVPEPPPEPESSITLTPVESAVVAEEHEVVPERPVTCMV-SETP 1289
Query: 289 AVLALLDTVLDSELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELV 348
A+ A TVL SE V++ DS + + EV + AV P+ E
Sbjct: 1290 AMSAE-PTVLASE-PPVMSETAETFDSMRASGHVASEVSTSLLVPAVTTPVLAESILEPP 1347
Query: 349 AVLAPLEGVLDSELVAVLAPLEV-VLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSEL 407
A+ AP +S +AVL V VL+S V VL S V VL P +
Sbjct: 1348 AMAAP-----ESSAMAVLESSAVTVLESSTVT-------VLESSTVTVLEP-------SV 1388
Query: 408 VTMLTPLEVTLDPEMVAVLTPLEVTLDPELVAVLAPLEITLDP 450
VT+ P V +P+ V + P+ L+P V VL P L P
Sbjct: 1389 VTVPEP-PVVAEPDYVTIPVPVVSALEPS-VPVLEPAVSVLQP 1429
Score = 29.6 bits (65), Expect = 5.9
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Query: 26 VVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDSELVAVLAPLDTVLDSELVAVLAPLE 85
VV +P V EP VT+ +V+ L P V VL P +VL + +++
Sbjct: 1388 VVTVPEPPVVAEPDYVTIPVPVVSALEP--------SVPVLEPAVSVLQPSM--IVSEPS 1437
Query: 86 VVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLD 119
V + V V P TV + V +P EV ++
Sbjct: 1438 VSVQESTVTVSEPAVTVSEQTQV---IPTEVAIE 1468
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 42.7 bits (99), Expect = 7e-04
Identities = 71/240 (29%), Positives = 105/240 (43%), Gaps = 22/240 (9%)
Query: 35 VPEPAEVTLDPELVAVLAPLE--VVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDSEV 92
VPEP +PE L P+E VV + V P+ T + SE A+ A VL SE
Sbjct: 1248 VPEPPP---EPESSITLTPVESAVVAEEHEVVPERPV-TCMVSETPAMSAE-PTVLASEP 1302
Query: 93 VAVLAPLDTVLDSELVAVLVPLEVVLDPELVAVLAPLEVVLDSELVAVLAPLEVVLDSEL 152
+ +T DS + V EV + AV P+ E A+ AP +S
Sbjct: 1303 PVMSETAET-FDSMRASGHVASEVSTSLLVPAVTTPVLAESILEPPAMAAP-----ESSA 1356
Query: 153 VAVLAPLEV-VLESELVAVLAPLEV-VLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDS 210
+AVL V VLES V VL V VL+ +V V P V + + VT+ +P+ + L+
Sbjct: 1357 MAVLESSAVTVLESSTVTVLESSTVTVLEPSVVTVPEP-PVVAEPDYVTIPVPVVSALEP 1415
Query: 211 ELVAVPAPLEVVLDSELVAVPAPLEGVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLDS 270
+ + + V+ S +V+ P+ + V V P V + V P EV ++S
Sbjct: 1416 SVPVLEPAVSVLQPSMIVSEPSV---SVQESTVTVSEPAVTVSEQTQV---IPTEVAIES 1469
Score = 34.7 bits (78), Expect = 0.18
Identities = 49/254 (19%), Positives = 119/254 (46%), Gaps = 40/254 (15%)
Query: 131 VVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLES-ELVAVLAPLEVVLDSELVA----V 185
V L+ + +V+ E+ + ++ P LES VA P +V ++ + +
Sbjct: 649 VALEISVQSVVTTSELSTMTVSQSLEVPSTTALESYNTVAQELPTTLVGETSVTVGVDPL 708
Query: 186 LAPLEGVLDSELVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDSELVAV 245
+AP +L S + I +DS+++A +DS+++A +DS+++A
Sbjct: 709 MAPESHILASNTMETHILASNTMDSQMLA-----SNTMDSQMLA-----SNTMDSQMLA- 757
Query: 246 LAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAV 305
+DS+++A + +DS+++A + +L + + L + +DS+++A
Sbjct: 758 ----SSTMDSQMLATSS-----MDSQMLATSSMDSQMLATSTMDSQMLATSSMDSQMLAT 808
Query: 306 LAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAV 365
+ +DS+++A + ++S+++A + +L + + +DS+++A
Sbjct: 809 SS-----MDSQMLATSS-----MDSQMLATSSMDSQMLATSTMDSQMLATSTMDSQMLAT 858
Query: 366 LAPLEVVLDSELVA 379
+ +DS+++A
Sbjct: 859 SS-----MDSQMLA 867
Score = 34.7 bits (78), Expect = 0.18
Identities = 64/223 (28%), Positives = 90/223 (40%), Gaps = 25/223 (11%)
Query: 229 AVPAPLEGVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELV 288
+V A VL SE + +S + P VV + V P+ ++ SE
Sbjct: 1231 SVSASDPSVLVSEAAVTVPEPPPEPESSITLTPVESAVVAEEHEVVPERPVTCMV-SETP 1289
Query: 289 AVLALLDTVLDSELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEVVLESELV 348
A+ A TVL SE V++ DS + + EV + AV P+ E
Sbjct: 1290 AMSAE-PTVLASE-PPVMSETAETFDSMRASGHVASEVSTSLLVPAVTTPVLAESILEPP 1347
Query: 349 AVLAPLEGVLDSELVAVLAPLEV-VLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSEL 407
A+ AP +S +AVL V VL+S V VL S V VL P +
Sbjct: 1348 AMAAP-----ESSAMAVLESSAVTVLESSTVT-------VLESSTVTVLEP-------SV 1388
Query: 408 VTMLTPLEVTLDPEMVAVLTPLEVTLDPELVAVLAPLEITLDP 450
VT+ P V +P+ V + P+ L+P V VL P L P
Sbjct: 1389 VTVPEP-PVVAEPDYVTIPVPVVSALEPS-VPVLEPAVSVLQP 1429
Score = 29.6 bits (65), Expect = 5.9
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Query: 26 VVCIPVRAAVPEPAEVTLDPELVAVLAPLEVVLDSELVAVLAPLDTVLDSELVAVLAPLE 85
VV +P V EP VT+ +V+ L P V VL P +VL + +++
Sbjct: 1388 VVTVPEPPVVAEPDYVTIPVPVVSALEP--------SVPVLEPAVSVLQPSM--IVSEPS 1437
Query: 86 VVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLD 119
V + V V P TV + V +P EV ++
Sbjct: 1438 VSVQESTVTVSEPAVTVSEQTQV---IPTEVAIE 1468
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 39.3 bits (90), Expect = 0.007
Identities = 111/367 (30%), Positives = 129/367 (35%), Gaps = 54/367 (14%)
Query: 33 AAVPEPAEVTLDPELVAVLAPLEVVLDSELVAVLAPLDTVLDSELVAVLAPLEVVLDSEV 92
AAVP P E P A P S AV P + S AV P E S
Sbjct: 1005 AAVPTPEE----PTSPAAAVPTPEEPTSPAAAVPPPEEPT--SPAAAVPTPEEPT--SPA 1056
Query: 93 VAVLAPLDTVLDSELVAVLVPLEVVLDPELVAVLAPLEVVLDSELVAVLAPLEVVLDSEL 152
AV P + S AV P E P A P S AV P E S
Sbjct: 1057 AAVPTPEEPT--SPAAAVPTPEE----PTSPAAAVPTPEEPTSPAAAVPTPEEPT--SPA 1108
Query: 153 VAVLAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVLDSEL 212
AV P E S AV P E S AV P E + V P S
Sbjct: 1109 AAVPTPEEPA--SPAAAVPTPEEPA--SPAAAVPTPEEPAFPAPAV----PTPEESASAA 1160
Query: 213 VAVPAPLEVVLDSELVAVPAPLEGVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLDSEL 272
VAVP P E S AVP P E + AV+A LE S +VP P +V + L
Sbjct: 1161 VAVPTPEESA--SPAAAVPTPAE---SASFAAVVATLEEP-TSPAASVPTPAAMV--ATL 1212
Query: 273 VAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSELVAVLASLEVVLESEL 332
+P V SE A LA AV P E + V L S
Sbjct: 1213 EEFTSPAASVPTSEEPASLA----------AAVSNPEEPTSPAAAVPTLEE----PTSSA 1258
Query: 333 VAVLAPLEVVLESELVAVLAPLEGVLDSELVAVL----APLEVVLDSELVAMLIPLDAVL 388
AVL P E L S +V P E + V+ L +P V E+ A IP +V
Sbjct: 1259 AAVLTPEE--LSSPAASVPTPEEPASPAAAVSNLEEPASPAAAVPTPEVAA--IPAASVP 1314
Query: 389 NSELVAV 395
E+ A+
Sbjct: 1315 TPEVPAI 1321
>gi|24308527 stereocilin [Homo sapiens]
Length = 1775
Score = 37.0 bits (84), Expect = 0.037
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 283 LDSELVAVLAL-LDTVLDSELVAVLAPLEVVLDSELVAVLASLEVVLESELVAVLAPLEV 341
LDS+L+ L + L L +E + ++ L +L+A+ + L + LAP E
Sbjct: 1256 LDSKLLLDLPIQLMDRLSNESIMLVVELVQRAPEQLLALTPLHQAALAERALQNLAPKET 1315
Query: 342 VLESELVAVLAPLEGVLDSELVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEV 401
+ E++ L PL G L +E + PL+++L L +EL +L+ V
Sbjct: 1316 PVSGEVLETLGPLVGFLGTESTRQI-PLQILLSHLSQLQGFCLGETFATELGWLLLQESV 1374
Query: 402 -----VWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLDPE 436
+W+ + V L TL E ++ L P E L PE
Sbjct: 1375 LGKPELWSQDEVEQAGRLVFTLSTEAIS-LIPRE-ALGPE 1412
Score = 36.2 bits (82), Expect = 0.063
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 32 RAAVPEPAEVTLDPELVAVLAPLEVVLDSELVAVLAPLDTVLDSELV-------AVLAPL 84
R A+PEP T+ PEL + + L + L +L+ L+ +L ELV L PL
Sbjct: 1238 RMAMPEPEWTTVGPELNGLDSKLLLDLPIQLMDRLSNESIMLVVELVQRAPEQLLALTPL 1297
Query: 85 -EVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDPELVAVLAPLEVVL 133
+ L + LAP +T + E++ L PL L E + PL+++L
Sbjct: 1298 HQAALAERALQNLAPKETPVSGEVLETLGPLVGFLGTESTRQI-PLQILL 1346
Score = 31.6 bits (70), Expect = 1.6
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 108 VAVLVPLEVVLDPELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVA-------VLAPL- 159
+A+ P + PEL + + L + L +L+ L+ ++L ELV L PL
Sbjct: 1239 MAMPEPEWTTVGPELNGLDSKLLLDLPIQLMDRLSNESIMLVVELVQRAPEQLLALTPLH 1298
Query: 160 EVVLESELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTVLIPLDTVL 208
+ L + LAP E + E++ L PL G L +E T IPL +L
Sbjct: 1299 QAALAERALQNLAPKETPVSGEVLETLGPLVGFLGTE-STRQIPLQILL 1346
Score = 29.6 bits (65), Expect = 5.9
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 88 LDSEVVAVLAPLDTV--LDSELVAVLVPLEVVLDPELVAVLAPL-EVVLDSELVAVLAPL 144
LDS+++ L P+ + L +E + ++V L V PE + L PL + L + LAP
Sbjct: 1256 LDSKLLLDL-PIQLMDRLSNESIMLVVEL-VQRAPEQLLALTPLHQAALAERALQNLAPK 1313
Query: 145 EVVLDSELVAVLAPLEVVLESELVAVLAPLEVVL 178
E + E++ L PL L +E + PL+++L
Sbjct: 1314 ETPVSGEVLETLGPLVGFLGTESTRQI-PLQILL 1346
>gi|46048439 N-acetyltransferase 6 [Homo sapiens]
Length = 308
Score = 34.7 bits (78), Expect = 0.18
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 379 AMLIP-LDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPLEVTLDPEL 437
A L P LD EL+ P E+ + L PL+ T PEM P E+TLDPE
Sbjct: 11 AKLTPTLDPTHRMELILSTSPAELTLDPACQPKL-PLDSTCQPEMTFNPGPTELTLDPEH 69
Query: 438 VAVLAP----LEITLDPV 451
P E+TL+PV
Sbjct: 70 QPEETPAPSLAELTLEPV 87
Score = 29.6 bits (65), Expect = 5.9
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 64 AVLAP-LDTVLDSELVAVLAPLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDPE 121
A L P LD EL+ +P E+ LD L PLD+ E+ P E+ LDPE
Sbjct: 11 AKLTPTLDPTHRMELILSTSPAELTLDPACQPKL-PLDSTCQPEMTFNPGPTELTLDPE 68
>gi|58761535 zinc finger protein 518B [Homo sapiens]
Length = 1074
Score = 33.9 bits (76), Expect = 0.31
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 25 EVVCIPVRAAVPEPAEVTLDPEL---VAVLAPL-EVVLDSELVAVLAPLDTVLDSELVAV 80
+VVCIP + + EP EV L V VL+P E V + V+AP + V+ + +A
Sbjct: 287 DVVCIPNKMTLSEPNEVNLFENKNVEVEVLSPAKEPVQPGMPLTVVAPAELVVPANCLAQ 346
Query: 81 LAPLEVVLDS-EVVAVLAPLD 100
L ++VV + ++V L PL+
Sbjct: 347 LIDVKVVNGTQQLVLKLFPLE 367
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 33.5 bits (75), Expect = 0.41
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 10/157 (6%)
Query: 83 PLEVVLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDPELVAVLAPLEVVLDSELVAVLA 142
PLE + EV L P+D + EL LE + E L++ L EL +
Sbjct: 311 PLEPEEEEEVELELMPVDLGSEQELEQQRQELERQQELERQQEQRQLQLKLQEELQQLEQ 370
Query: 143 PLE----VVLDSELVAVLAPLEV-VLESELVAVLAPLEVVLDSELV-AVLAPLEGVLDSE 196
LE + E+ L P+E+ + E+ L P++ L ELV A V +
Sbjct: 371 QLEQQQQQLEQQEVQLELTPVELGAQQQEVQLELTPVQPELQLELVPAAGGGGAAVPGAP 430
Query: 197 LVTVLIPLDTVLDSELVAVPAPLEVVLDSELVAVPAP 233
V+ P V+ EL+ +PA V +VA+P P
Sbjct: 431 AAVVVAPPGYVVVQELMVLPA----VAAPAVVAIPGP 463
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 31.6 bits (70), Expect = 1.6
Identities = 74/291 (25%), Positives = 117/291 (40%), Gaps = 22/291 (7%)
Query: 29 IPVRAAVPEPAEVTLDPELV---AVLAPLEVVLDSELVAVLAPLDTVLDSELVAVLAPLE 85
+PV A+P+ EV + E+V VL E VL E VL + VL E E
Sbjct: 10095 VPVPVALPQEEEVLFEEEIVPEEEVLPEEEEVLPEE-EEVLPEEEEVLPEEEEIPPEEEE 10153
Query: 86 VVLDSEVV---AVLAPLDTVLDSELVAVLVPLEVVLDPELVAVLAPLEVVLDSELVAVLA 142
V + E V P + VL V VP V PE+ + +VV+ + A A
Sbjct: 10154 VPPEEEYVPEEEEFVPEEEVLPEVKPKVPVPAPV---PEIKKKVTEKKVVIPKKEEAPPA 10210
Query: 143 PL-EVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEGVLD------S 195
+ EV E ++ P E + V E + + E+ +E V +
Sbjct: 10211 KVPEVPKKVEEKRIILPKEEEVLPVEVTEEPEEEPISEEEIPEEPPSIEEVEEVAPPRVP 10270
Query: 196 ELVTVLIP-LDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDSEL--VAVLAPLEVV 252
E++ +P T + ++ A PA + + E V VP + +++ V P + V
Sbjct: 10271 EVIKKAVPEAPTPVPKKVEAPPAKVSKKIPEEKVPVPVQKKEAPPAKVPEVPKKVPEKKV 10330
Query: 253 LDSELVAVPAPLEVVLDSELVAVLAPLEVVLDS--ELVAVLALLDTVLDSE 301
L + AVP + E V+V EVV+ EL V A ++ + + E
Sbjct: 10331 LVPKKEAVPPAKGRTVLEEKVSVAFRQEVVVKERLELEVVEAEVEEIPEEE 10381
>gi|33239440 zinc finger protein, Y-linked isoform 1 [Homo sapiens]
Length = 801
Score = 31.2 bits (69), Expect = 2.0
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 11/137 (8%)
Query: 119 DPELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAV---LAPLEVVLESELVAVLAPLE 175
DP+ V + +E V+ E V LE SE V + + +V E L P +
Sbjct: 59 DPDSVVIQDVVEDVVIEEDVQCSDILEEADVSENVIIPEQVLDSDVTEEVSLPHCTVPDD 118
Query: 176 VVLDSELVAVLAPLEGVLDSELVTVL-------IPLDTVLDSELVAVPAPLEVVLDSELV 228
V+ ++ E VL SE + V + D+V+++E++ P ++V + LV
Sbjct: 119 VLASDITSTSMSMPEHVLTSESMHVCDIGHVEHMVHDSVVEAEIITDPLTSDIVSEEVLV 178
Query: 229 AVPAPLEGVLDSELVAV 245
A AP E V+D+ ++V
Sbjct: 179 ADCAP-EAVIDASGISV 194
>gi|223717965 zinc finger protein, Y-linked isoform 2 [Homo sapiens]
Length = 724
Score = 31.2 bits (69), Expect = 2.0
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 11/137 (8%)
Query: 119 DPELVAVLAPLEVVLDSELVAVLAPLEVVLDSELVAV---LAPLEVVLESELVAVLAPLE 175
DP+ V + +E V+ E V LE SE V + + +V E L P +
Sbjct: 33 DPDSVVIQDVVEDVVIEEDVQCSDILEEADVSENVIIPEQVLDSDVTEEVSLPHCTVPDD 92
Query: 176 VVLDSELVAVLAPLEGVLDSELVTVL-------IPLDTVLDSELVAVPAPLEVVLDSELV 228
V+ ++ E VL SE + V + D+V+++E++ P ++V + LV
Sbjct: 93 VLASDITSTSMSMPEHVLTSESMHVCDIGHVEHMVHDSVVEAEIITDPLTSDIVSEEVLV 152
Query: 229 AVPAPLEGVLDSELVAV 245
A AP E V+D+ ++V
Sbjct: 153 ADCAP-EAVIDASGISV 168
>gi|239755210 PREDICTED: hypothetical protein [Homo sapiens]
Length = 241
Score = 30.4 bits (67), Expect = 3.5
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 327 VLESELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAVLAPLEVVLDSELVAMLIPLDA 386
+L L+ + L+ VL L VL E VL+ + L L+V + E A+L+ L
Sbjct: 109 LLAGPLLHGVPELQRVLALHLAVVLGLHEAVLE---LVNLQKLQVTVPHERGALLLTLVR 165
Query: 387 VLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTP 428
+ ++V +L+ + + L +L PL L AVL P
Sbjct: 166 QAHGQVVVLLLAALELAAAGLALLLEPLHTLLVLAQQAVLHP 207
Score = 29.6 bits (65), Expect = 5.9
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 253 LDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVV 312
L+ L+ + P ++ L L+ + L+ VL L VL L + VL+ + L L+V
Sbjct: 96 LEQGLLLLQLPQQL-LAGPLLHGVPELQRVLALHLAVVLGLHEAVLE---LVNLQKLQVT 151
Query: 313 LDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAVLAP 368
+ E A+L +L ++V +L + + L +L PL +L AVL P
Sbjct: 152 VPHERGALLLTLVRQAHGQVVVLLLAALELAAAGLALLLEPLHTLLVLAQQAVLHP 207
>gi|169205253 PREDICTED: hypothetical protein [Homo sapiens]
Length = 3859
Score = 30.4 bits (67), Expect = 3.5
Identities = 52/236 (22%), Positives = 96/236 (40%), Gaps = 29/236 (12%)
Query: 87 VLDSEVVAVLAPLDTVLDSELVAVLVPLEVVLDPELVAVLAPLEVVLDSELVAV------ 140
V+ S+ + VL P D V +V + +V+ + A + +D +V V
Sbjct: 3377 VVPSDDLVVLEPPDKV---PVVPDPISNGLVVSDPITNNTAATDPSVDGSVVPVSPADGP 3433
Query: 141 LAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVTV 200
+AP+ + ++ A VV +S++ A + V + + P G + S+L
Sbjct: 3434 VAPVTLADCPDVTITPADDSVVSDSKIRAEFEDVPVTIADCPNVPVNPKSGPVVSDLA-- 3491
Query: 201 LIPLDTVLDSELVAVPAPLEVVLDSELVAVPAPLEGVLDSELVAVLAPLEVVLDSELVAV 260
+D +V +P P ++V VP + + DS +V+ +
Sbjct: 3492 -------VDCPVVPIPPPDDLVAPEPPDEVPVVPDPITDS----------LVVSDPMTDG 3534
Query: 261 PAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAV-LAPLEVVLDS 315
P + +D +V V++P +++ + V L DT D + V LA VV DS
Sbjct: 3535 PVASDPSIDGIVVPVVSPSGLLVLDSVADVSILPDTSADVPVTPVTLADGSVVPDS 3590
>gi|239749699 PREDICTED: hypothetical protein XP_002347122 [Homo
sapiens]
Length = 241
Score = 30.4 bits (67), Expect = 3.5
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 327 VLESELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAVLAPLEVVLDSELVAMLIPLDA 386
+L L+ + L+ VL L VL E VL+ + L L+V + E A+L+ L
Sbjct: 109 LLAGPLLHGVPELQRVLALHLAVVLGLHEAVLE---LVNLQKLQVTVPHERGALLLTLVR 165
Query: 387 VLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTP 428
+ ++V +L+ + + L +L PL L AVL P
Sbjct: 166 QAHGQVVVLLLAALELAAAGLALLLEPLHTLLVLAQQAVLHP 207
Score = 29.6 bits (65), Expect = 5.9
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 253 LDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVV 312
L+ L+ + P ++ L L+ + L+ VL L VL L + VL+ + L L+V
Sbjct: 96 LEQGLLLLQLPQQL-LAGPLLHGVPELQRVLALHLAVVLGLHEAVLE---LVNLQKLQVT 151
Query: 313 LDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAVLAP 368
+ E A+L +L ++V +L + + L +L PL +L AVL P
Sbjct: 152 VPHERGALLLTLVRQAHGQVVVLLLAALELAAAGLALLLEPLHTLLVLAQQAVLHP 207
>gi|239743965 PREDICTED: hypothetical protein XP_002344250 [Homo
sapiens]
Length = 241
Score = 30.4 bits (67), Expect = 3.5
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 327 VLESELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAVLAPLEVVLDSELVAMLIPLDA 386
+L L+ + L+ VL L VL E VL+ + L L+V + E A+L+ L
Sbjct: 109 LLAGPLLHGVPELQRVLALHLAVVLGLHEAVLE---LVNLQKLQVTVPHERGALLLTLVR 165
Query: 387 VLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTP 428
+ ++V +L+ + + L +L PL L AVL P
Sbjct: 166 QAHGQVVVLLLAALELAAAGLALLLEPLHTLLVLAQQAVLHP 207
Score = 29.6 bits (65), Expect = 5.9
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 253 LDSELVAVPAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVV 312
L+ L+ + P ++ L L+ + L+ VL L VL L + VL+ + L L+V
Sbjct: 96 LEQGLLLLQLPQQL-LAGPLLHGVPELQRVLALHLAVVLGLHEAVLE---LVNLQKLQVT 151
Query: 313 LDSELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLDSELVAVLAP 368
+ E A+L +L ++V +L + + L +L PL +L AVL P
Sbjct: 152 VPHERGALLLTLVRQAHGQVVVLLLAALELAAAGLALLLEPLHTLLVLAQQAVLHP 207
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 30.4 bits (67), Expect = 3.5
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 37 EPAEVTLDPELVAVLAPLEVVLDSELVAVLAPLDTVLDSEL-------VAVLAPLEVVLD 89
E E+ L E +L ++ +D+ L++++ ++ +S L V++L L +LD
Sbjct: 79 EMEELMLQDE--TLLGTMQSYMDASLISLIEDFGSLGESRLSLEDQNEVSLLTALTEILD 136
Query: 90 SEVVAVLAPLDTVLDSELV 108
+ L+P D++ DSEL+
Sbjct: 137 NADSENLSPFDSIPDSELL 155
Score = 30.4 bits (67), Expect = 3.5
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 130 EVVLDSELVAVLAPLEVVLDSELVAVLAPLEVVLESELVAVLAPLEVVLDSELVAVLAPL 189
E++L E +L ++ +D+ L++++ + ES L LE D V++L L
Sbjct: 82 ELMLQDE--TLLGTMQSYMDASLISLIEDFGSLGESRL-----SLE---DQNEVSLLTAL 131
Query: 190 EGVLDSELVTVLIPLDTVLDSELVAVP 216
+LD+ L P D++ DSEL+ P
Sbjct: 132 TEILDNADSENLSPFDSIPDSELLVSP 158
>gi|38488767 microtubule associated serine/threonine kinase family
member 4 isoform b [Homo sapiens]
Length = 250
Score = 30.0 bits (66), Expect = 4.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 231 PAPLEGVLDSELVAVLAPLEVVLDSELVAVPAPL 264
P PL G L + A AP V+L+ ++A+P PL
Sbjct: 66 PPPLGGTLGARAPAAWAPASVLLERGVLALPPPL 99
>gi|4885615 signal transducer and activator of transcription 2 [Homo
sapiens]
Length = 851
Score = 29.6 bits (65), Expect = 5.9
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 384 LDAVLNSELVAVLIPLEVVWNSELVTMLTPLEVTLDPEMVAVLTPL---EVTLDPELVAV 440
L V N ++ + PLE+ EL ++ L + +PE+ L PL + L PEL +V
Sbjct: 695 LIVVSNRQVDELQQPLELKPEPELESLELELGLVPEPELSLDLEPLLKAGLDLGPELESV 754
Query: 441 LAPLEITLDPVL 452
LE TL+PV+
Sbjct: 755 ---LESTLEPVI 763
>gi|55749742 HEAT repeat containing 5B [Homo sapiens]
Length = 2071
Score = 29.6 bits (65), Expect = 5.9
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 362 LVAVLAPLEVVLDSELVAMLIPLDAVLNSELVAVLIPLEVVWNSELVTML 411
+ A L L +LDS + I D ++ EL++VL L + WN V +L
Sbjct: 1611 VTACLQALHTLLDSPYARVHIAEDQLIGVELLSVLHRLLLTWNPSSVQLL 1660
>gi|28372551 bactericidal/permeability-increasing protein-like 2
[Homo sapiens]
Length = 507
Score = 29.3 bits (64), Expect = 7.7
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 153 VAVLAPLEVVLESELVAVLAPLEVVLDSELVAVLAPLEGVLDSELVT--VLIPLD--TVL 208
V+ L V+ S + P+ L+ L ++A L++ L T VL +D T+L
Sbjct: 170 VSFSGELSVLYNSFAEPMEKPILKNLNEMLCPIIASEVKALNANLSTLEVLTKIDNYTLL 229
Query: 209 DSELVAVPAPLEVVLDSELVAVPAPLEGVLD 239
D L++ P E LD L V PLE + D
Sbjct: 230 DYSLISSPEITENYLDLNLKGVFYPLENLTD 260
>gi|15619008 vacuolar protein sorting 13A isoform B [Homo sapiens]
Length = 3095
Score = 29.3 bits (64), Expect = 7.7
Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 19/182 (10%)
Query: 261 PAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDS----- 315
P LE +L E A+L E + SE LL T + L + +VL
Sbjct: 451 PETLEEMLTPEEKALL--YEAIGYSETAVDPTLLKTFEALKFFVHLKSMSIVLRENHQKP 508
Query: 316 ELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLD-SELVAVLAPLEVVLD 374
ELV + V+ E + V P ++ E + G+ D SE +L+ L+ +
Sbjct: 509 ELVDI-----VIEEFSTLIVQRPGAQAIKFETKIDSFHITGLPDNSEKPRLLSSLDDAMS 563
Query: 375 SELVAMLI-PLDAVLNSELVAVLIPLEVVWNSELVTMLT-----PLEVTLDPEMVAVLTP 428
+ I PLD ++ + PLE+++++ V + P EV L A LT
Sbjct: 564 LFQITFEINPLDETVSQRCIIEAEPLEIIYDARTVNSIVEFFRPPKEVHLAQLTAATLTK 623
Query: 429 LE 430
LE
Sbjct: 624 LE 625
>gi|66346676 vacuolar protein sorting 13A isoform D [Homo sapiens]
Length = 3069
Score = 29.3 bits (64), Expect = 7.7
Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 19/182 (10%)
Query: 261 PAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDS----- 315
P LE +L E A+L E + SE LL T + L + +VL
Sbjct: 451 PETLEEMLTPEEKALL--YEAIGYSETAVDPTLLKTFEALKFFVHLKSMSIVLRENHQKP 508
Query: 316 ELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLD-SELVAVLAPLEVVLD 374
ELV + V+ E + V P ++ E + G+ D SE +L+ L+ +
Sbjct: 509 ELVDI-----VIEEFSTLIVQRPGAQAIKFETKIDSFHITGLPDNSEKPRLLSSLDDAMS 563
Query: 375 SELVAMLI-PLDAVLNSELVAVLIPLEVVWNSELVTMLT-----PLEVTLDPEMVAVLTP 428
+ I PLD ++ + PLE+++++ V + P EV L A LT
Sbjct: 564 LFQITFEINPLDETVSQRCIIEAEPLEIIYDARTVNSIVEFFRPPKEVHLAQLTAATLTK 623
Query: 429 LE 430
LE
Sbjct: 624 LE 625
>gi|66346674 vacuolar protein sorting 13A isoform A [Homo sapiens]
Length = 3174
Score = 29.3 bits (64), Expect = 7.7
Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 19/182 (10%)
Query: 261 PAPLEVVLDSELVAVLAPLEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDS----- 315
P LE +L E A+L E + SE LL T + L + +VL
Sbjct: 451 PETLEEMLTPEEKALL--YEAIGYSETAVDPTLLKTFEALKFFVHLKSMSIVLRENHQKP 508
Query: 316 ELVAVLASLEVVLESELVAVLAPLEVVLESELVAVLAPLEGVLD-SELVAVLAPLEVVLD 374
ELV + V+ E + V P ++ E + G+ D SE +L+ L+ +
Sbjct: 509 ELVDI-----VIEEFSTLIVQRPGAQAIKFETKIDSFHITGLPDNSEKPRLLSSLDDAMS 563
Query: 375 SELVAMLI-PLDAVLNSELVAVLIPLEVVWNSELVTMLT-----PLEVTLDPEMVAVLTP 428
+ I PLD ++ + PLE+++++ V + P EV L A LT
Sbjct: 564 LFQITFEINPLDETVSQRCIIEAEPLEIIYDARTVNSIVEFFRPPKEVHLAQLTAATLTK 623
Query: 429 LE 430
LE
Sbjct: 624 LE 625
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,278,912
Number of Sequences: 37866
Number of extensions: 605444
Number of successful extensions: 2189
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1659
Number of HSP's gapped (non-prelim): 123
length of query: 454
length of database: 18,247,518
effective HSP length: 106
effective length of query: 348
effective length of database: 14,233,722
effective search space: 4953335256
effective search space used: 4953335256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.