Guide to the Human Genome
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Name: BPIL2 Sequence: fasta or formatted (507aa) NCBI GI: 28372551
Description:

bactericidal/permeability-increasing protein-like 2

Referenced in:

Additional Host Defense Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         26           1
 C cysteine            1.0          5           1
 D aspartate           3.2         16           1
 E glutamate           5.5         28           2
 F phenylalanine       6.5         33           2
 G glycine             5.5         28           2
 H histidine           1.8          9           1
 I isoleucine          7.3         37           3
 K lysine              4.3         22           2
 L leucine            13.0         66           2
 M methionine          2.4         12           2
 N asparagine          6.5         33           1
 P proline             5.7         29           2
 Q glutamine           3.6         18           2
 R arginine            2.6         13           1
 S serine             10.3         52           3
 T threonine           5.5         28           1
 V valine              6.1         31           1
 W tryptophan          1.0          5           1
 Y tyrosine            3.2         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bactericidal/permeability-increasing protein-like 2 ... 
BPI                   0.188   bactericidal/permeability-increasing protein precur...
PLTP                  0.143   phospholipid transfer protein isoform a precursor [Ho...
LBP                   0.142   lipopolysaccharide-binding protein precursor 
BPIL1                 0.098   bactericidal/permeability-increasing protein-like 1 ...
PLTP                  0.096   phospholipid transfer protein isoform b precursor [H...
C20orf185             0.080   antimicrobial peptide RYA3 
C20orf186             0.069   antimicrobial peptide RY2G5 
BPIL3                 0.046   bactericidal/permeability-increasing protein-like 3 ...
C20orf114             0.033   LPLUNC1 protein precursor 
LOC100292257          0.020   PREDICTED: similar to bactericidal/permeability-inc...
SERPINB1              0.006   serine (or cysteine) proteinase inhibitor, clade B (...
ANKRD13C              0.005   ankyrin repeat domain 13C 
COL24A1               0.005   collagen, type XXIV, alpha 1 
SYT17                 0.005   B/K protein 
PPM1G                 0.005   protein phosphatase 1G 
PPM1G                 0.005   protein phosphatase 1G 
LOC100293520          0.004   PREDICTED: hypothetical protein 
LOC100287207          0.004   PREDICTED: hypothetical protein XP_002342660 
LOC100294237          0.004   PREDICTED: hypothetical protein 
LOC100294174          0.004   PREDICTED: hypothetical protein 
LOC100294124          0.004   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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