Guide to the Human Genome
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Search of human proteins with 239508713

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239508713 PREDICTED: hypothetical protein [Homo sapiens]
         (424 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754487 PREDICTED: hypothetical protein [Homo sapiens]           879   0.0  
gi|239749042 PREDICTED: hypothetical protein [Homo sapiens]           879   0.0  
gi|239508713 PREDICTED: hypothetical protein [Homo sapiens]           879   0.0  
gi|239743067 PREDICTED: hypothetical protein [Homo sapiens]           877   0.0  
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom...    48   1e-05
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]            46   7e-05
gi|13540523 nucleosomal binding protein 1 [Homo sapiens]               45   1e-04
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]            44   3e-04
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]            44   3e-04
gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]     44   3e-04
gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]      44   3e-04
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]        42   8e-04
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi...    42   0.001
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]            41   0.002
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ...    41   0.002
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ...    40   0.004
gi|55741709 RNA binding motif protein 25 [Homo sapiens]                40   0.005
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ...    40   0.005
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ...    40   0.005
gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo sapi...    39   0.007
gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo s...    39   0.007
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s...    39   0.007
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi...    39   0.009
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi...    39   0.012
gi|4557509 cylicin 2 [Homo sapiens]                                    39   0.012
gi|17136078 VGF nerve growth factor inducible precursor [Homo sa...    39   0.012
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]            38   0.020
gi|13129006 nucleolar protein GU2 [Homo sapiens]                       38   0.020
gi|32484979 adaptor-related protein complex 3, beta 1 subunit [H...    37   0.026
gi|239749652 PREDICTED: hypothetical protein [Homo sapiens]            37   0.026

>gi|239754487 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 424

 Score =  879 bits (2271), Expect = 0.0
 Identities = 424/424 (100%), Positives = 424/424 (100%)

Query: 1   MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF 60
           MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF
Sbjct: 1   MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF 60

Query: 61  TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE 120
           TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE
Sbjct: 61  TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE 120

Query: 121 CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE 180
           CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE
Sbjct: 121 CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE 180

Query: 181 VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK 240
           VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK
Sbjct: 181 VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK 240

Query: 241 KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT 300
           KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT
Sbjct: 241 KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT 300

Query: 301 AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC 360
           AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC
Sbjct: 301 AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC 360

Query: 361 RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV 420
           RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV
Sbjct: 361 RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV 420

Query: 421 AKMT 424
           AKMT
Sbjct: 421 AKMT 424


>gi|239749042 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 424

 Score =  879 bits (2271), Expect = 0.0
 Identities = 424/424 (100%), Positives = 424/424 (100%)

Query: 1   MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF 60
           MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF
Sbjct: 1   MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF 60

Query: 61  TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE 120
           TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE
Sbjct: 61  TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE 120

Query: 121 CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE 180
           CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE
Sbjct: 121 CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE 180

Query: 181 VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK 240
           VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK
Sbjct: 181 VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK 240

Query: 241 KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT 300
           KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT
Sbjct: 241 KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT 300

Query: 301 AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC 360
           AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC
Sbjct: 301 AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC 360

Query: 361 RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV 420
           RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV
Sbjct: 361 RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV 420

Query: 421 AKMT 424
           AKMT
Sbjct: 421 AKMT 424


>gi|239508713 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 424

 Score =  879 bits (2271), Expect = 0.0
 Identities = 424/424 (100%), Positives = 424/424 (100%)

Query: 1   MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF 60
           MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF
Sbjct: 1   MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF 60

Query: 61  TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE 120
           TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE
Sbjct: 61  TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE 120

Query: 121 CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE 180
           CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE
Sbjct: 121 CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE 180

Query: 181 VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK 240
           VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK
Sbjct: 181 VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK 240

Query: 241 KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT 300
           KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT
Sbjct: 241 KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT 300

Query: 301 AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC 360
           AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC
Sbjct: 301 AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC 360

Query: 361 RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV 420
           RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV
Sbjct: 361 RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV 420

Query: 421 AKMT 424
           AKMT
Sbjct: 421 AKMT 424


>gi|239743067 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 424

 Score =  877 bits (2267), Expect = 0.0
 Identities = 423/424 (99%), Positives = 423/424 (99%)

Query: 1   MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF 60
           MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF
Sbjct: 1   MPHCSGRPKSTWKHPALFLCTGGSHGTESLRGMGAVLSTVQQQPGGRRSLGQAAPYRSRF 60

Query: 61  TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE 120
           TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE
Sbjct: 61  TKSGGETENMSLKQKCHDVVSKTREQQTYLESAHPQPKTSQHSPWHVKPHPHGCREQSSE 120

Query: 121 CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVASLIRGTVGCDSHAE 180
           CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTV SLIRGTVGCDSHAE
Sbjct: 121 CTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVVSLIRGTVGCDSHAE 180

Query: 181 VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK 240
           VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK
Sbjct: 181 VALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK 240

Query: 241 KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT 300
           KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT
Sbjct: 241 KRGREEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKGFSSLYKTLLGLLGPYSATLT 300

Query: 301 AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC 360
           AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC
Sbjct: 301 AQNPGNIHTLCPWRCTKHLGKQGPHFLHVARRLAPGWHWSDTAQLSPTLRSLGERHLPVC 360

Query: 361 RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV 420
           RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV
Sbjct: 361 RALGGTDRVVLSLVCVTLLLVRGHLQGPGAHTPVGTSSAPVPSRPGTRAEGWTMAAQSSV 420

Query: 421 AKMT 424
           AKMT
Sbjct: 421 AKMT 424


>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
           sapiens]
          Length = 1152

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 4/70 (5%)

Query: 200 EKGGEKEEGIGERGREGGKEGRE--GRRKERKEGREGGREGGKKRGREEGRKG-GVKERK 256
           E  GE+EEG GE   EG  EG E  G  K  +EG EG  EG ++ G  EG  G G  E +
Sbjct: 892 EGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEE 951

Query: 257 EGK-EGRREK 265
           EG+ EG  E+
Sbjct: 952 EGEWEGEEEE 961



 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)

Query: 201 KGGEKEEGIGERGREGGK-EGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           +GGE EEG GER  E  + EG E   +  +E  EG  E G+ +G EEG +G  +E  E  
Sbjct: 815 EGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEG 874

Query: 260 EGRREKRK 267
           EG  E+ +
Sbjct: 875 EGEGEEEE 882



 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 2/63 (3%)

Query: 203  GEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGR 262
            GE+EEG GE   EG  EG EG  +  +E  EG  EG ++ G EEG + G  E +   EG 
Sbjct: 957  GEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEG--EGEEEEGEEEGEEEGEGEEEGEGEGE 1014

Query: 263  REK 265
             E+
Sbjct: 1015 EEE 1017



 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 5/69 (7%)

Query: 200 EKGGEKEEGIGERGREGGKEGRE----GRRKERKEGREGGREGGKKRGREEGRKGGVKER 255
           E  GE+EEG GE   EG  EG E    G  +E  EG EG  E G+ +G EEG +G  +  
Sbjct: 875 EGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEG-EGEEEEGEGKGEEEGEEGEGEGE 933

Query: 256 KEGKEGRRE 264
           +E  EG  E
Sbjct: 934 EEEGEGEGE 942



 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 37/92 (40%), Positives = 44/92 (47%), Gaps = 9/92 (9%)

Query: 180 EVALGRASRIFGLEYFPLHSEKG-GEKEEGIGE------RGREGGKEGREGRRKERKEGR 232
           EV  G+  R    E      E+G GE+EEG GE      +G E G+EG      E  EG 
Sbjct: 818 EVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEG- 876

Query: 233 EGGREGGKKRGREEGRKGGVKERKEGKEGRRE 264
           EG  E G+  G EEG   G +E  EG EG  E
Sbjct: 877 EGEEEEGEGEGEEEGEGEGEEEEGEG-EGEEE 907



 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 4/69 (5%)

Query: 200  EKGGEKEEGIGERGREG-GKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEG 258
            E+ GE EEG GE   EG G+E  EG  +   EG EG  EG ++ G EEG +   ++  EG
Sbjct: 996  EEEGE-EEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEER--EKEGEG 1052

Query: 259  KEGRREKRK 267
            +E RR + +
Sbjct: 1053 EENRRNREE 1061



 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 200  EKGGEKEEGIGERGREGGKEG--REGRRKERKEGREGGREGGKKRGREEGRKG-GVKERK 256
            E  GE+EEG GE   E G+E    EG  +E  EG     E G+  G  EG +G G  E +
Sbjct: 978  EGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEE 1037

Query: 257  EGKEGRREKRK 267
            EG+E   E+ K
Sbjct: 1038 EGEEEGEEREK 1048



 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 18/97 (18%)

Query: 200 EKGGEKEEGIGER--GREGGKEGREGRRKERKEGR--EGGRE------------GGKKRG 243
           E+GGE+E G GE   G    +E +EG  KE  EG   EG RE            G +++G
Sbjct: 728 EEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKG 787

Query: 244 REEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKG 280
            EEG +G  +E  E  EGR E+++       G+ E+G
Sbjct: 788 EEEGDQGEGEE--EETEGRGEEKEEGGEVEGGEVEEG 822



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 41/123 (33%), Positives = 56/123 (45%), Gaps = 33/123 (26%)

Query: 191 GLEYFPLHSEKGGEKEEGIGERGR--EGGKE-----------GREGRRKERKEGREGGR- 236
           G E++     + GEK++G GE  R  EG KE           G E  +KER++G +  R 
Sbjct: 665 GAEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERN 724

Query: 237 ----EGGKK-----------RGREEGRKGGVKERKEGK--EGRREKR--KLAIPSNFGKT 277
               EGG++           R  EE ++G  KE  EG+  EG REK   +       GK 
Sbjct: 725 QEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKE 784

Query: 278 EKG 280
           EKG
Sbjct: 785 EKG 787



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 7/72 (9%)

Query: 200 EKGGEKEEGIG---ERGREG--GKEGREGRRK-ERKEGREGGREGGKKRGREEGRKGGVK 253
           E  GE+EEG G   E G EG   +EG EG  + E +EG   G E G+  G EE  +G  +
Sbjct: 846 EGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGE 905

Query: 254 ERKEGKEGRREK 265
           E  EG EG  E+
Sbjct: 906 EEGEG-EGEEEE 916



 Score = 40.8 bits (94), Expect = 0.002
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 5/70 (7%)

Query: 203 GEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGR-----KGGVKERKE 257
           GE EE  GER +E G+  +E R  + ++G E G +G  +    EGR     +GG  E  E
Sbjct: 759 GEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGE 818

Query: 258 GKEGRREKRK 267
            +EG+ E+ +
Sbjct: 819 VEEGKGEREE 828



 Score = 40.8 bits (94), Expect = 0.002
 Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 200 EKGGEKEEGIGERGREGGKEGRE--GRRKERKEGR-EGGREGGKKRGREEGRKGGVKERK 256
           E+ GE+ EG  E G EG  EG E  G  +  +EG  EG  E G+  G EEG   G +E  
Sbjct: 859 EEEGEEGEG-EEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEG 917

Query: 257 EGK 259
           EGK
Sbjct: 918 EGK 920



 Score = 40.4 bits (93), Expect = 0.003
 Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 3/67 (4%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRK-ERKEGR-EGGREGGKKRGREEGRKGGVKERKE 257
           E+ GE+ EG GE   EG  EG +G  + E +EG  EG  E G+  G EEG   G +   E
Sbjct: 922 EEEGEEGEGEGEE-EEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGE 980

Query: 258 GKEGRRE 264
           G+E   E
Sbjct: 981 GEEEEGE 987



 Score = 40.4 bits (93), Expect = 0.003
 Identities = 28/66 (42%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 200  EKGGEKEEGIGERGREGGK-EGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEG 258
            E  GE EEG GE   E G+ EG E   +E  E    G E G+  G EE  +G V+   EG
Sbjct: 969  EGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEE-EEGEVEGEVEG 1027

Query: 259  KEGRRE 264
            +EG  E
Sbjct: 1028 EEGEGE 1033



 Score = 40.0 bits (92), Expect = 0.004
 Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 9/73 (12%)

Query: 200 EKGGEKEEGIGERGREGGKEGR-EGRRKERK-EGREGGREGGKKRG-----REEGRKGGV 252
           E  GE+EEG G +G E G+EG  EG  +E + EG +G  EG ++ G      EEG   G 
Sbjct: 909 EGEGEEEEGEG-KGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGE 967

Query: 253 KERK-EGKEGRRE 264
           +E + EG+EG  E
Sbjct: 968 EEGEGEGEEGEGE 980



 Score = 39.7 bits (91), Expect = 0.005
 Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 5/67 (7%)

Query: 200 EKGGEKEEGIGER--GREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKE 257
           E+ GE+ EG GE   G   G+E  EG  +E +EG   G E G+  G EE  +G  K  +E
Sbjct: 868 EEEGEEGEGEGEEEEGEGEGEEEGEGEGEE-EEGEGEGEEEGEGEGEEEEGEG--KGEEE 924

Query: 258 GKEGRRE 264
           G+EG  E
Sbjct: 925 GEEGEGE 931



 Score = 38.9 bits (89), Expect = 0.009
 Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 4/68 (5%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKG-GVKERKEG 258
           E  GE+EEG GE G +G  EG E   +   E  EG  EG ++ G  EG +G G  E +EG
Sbjct: 929 EGEGEEEEGEGE-GEDGEGEGEEEEGEWEGEEEEGEGEG-EEEGEGEGEEGEGEGEEEEG 986

Query: 259 K-EGRREK 265
           + EG  E+
Sbjct: 987 EGEGEEEE 994



 Score = 38.5 bits (88), Expect = 0.012
 Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 9/88 (10%)

Query: 200 EKGGEKEEGIGERGREGGKEGR------EGRRKERKEGR--EGGREGGKKRGREEGRKGG 251
           E+  E+  G  E+G E G +G       EGR +E++EG   EGG     K  REE  + G
Sbjct: 774 ERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEG 833

Query: 252 VKERKEGKEGRREKRKLAIPSNFGKTEK 279
             E +EG EG  E+ +       GK E+
Sbjct: 834 EGEEEEG-EGEEEEGEGEEEEGEGKGEE 860



 Score = 37.0 bits (84), Expect = 0.034
 Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 8/73 (10%)

Query: 200  EKGGEKEEGIGERGREGGK-EGR------EGRRKERKEGREGGREGGKKRGREEG-RKGG 251
            E  GE E+G GE   E G+ EG       EG  +   EG EG  EG ++ G  EG  + G
Sbjct: 936  EGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEG 995

Query: 252  VKERKEGKEGRRE 264
             +E +E  EG  E
Sbjct: 996  EEEGEEEGEGEEE 1008



 Score = 35.8 bits (81), Expect = 0.076
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 9/86 (10%)

Query: 204 EKEEGIGERGREGGKEGR--------EGRRKERKEGREGGREGGKKRGRE-EGRKGGVKE 254
           EKEEG  ++    GKE +        EG  +E +   E   EGG+  G E E  KG  +E
Sbjct: 769 EKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREE 828

Query: 255 RKEGKEGRREKRKLAIPSNFGKTEKG 280
            +E  EG  E+ +       G+ E+G
Sbjct: 829 EEEEGEGEEEEGEGEEEEGEGEEEEG 854



 Score = 35.4 bits (80), Expect = 0.099
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 7/66 (10%)

Query: 201  KGGEKEEGIGERGREGGKEGREGRRK-ERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
            +G E+EEG      EG  EG EG  + E +EG E G E  K+   EE R+   +E +E +
Sbjct: 1012 EGEEEEEG----EVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRN--REEEEEE 1065

Query: 260  EGRREK 265
            EG+ ++
Sbjct: 1066 EGKYQE 1071



 Score = 32.7 bits (73), Expect = 0.64
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 5/61 (8%)

Query: 204  EKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRR 263
            E EEG GE   E G+E  EG  +E KEG   G E  + R  EE  +G  +E  E +  R+
Sbjct: 1026 EGEEGEGEGEEEEGEE--EGEERE-KEGE--GEENRRNREEEEEEEGKYQETGEEENERQ 1080

Query: 264  E 264
            +
Sbjct: 1081 D 1081



 Score = 32.3 bits (72), Expect = 0.84
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 197  LHSEKGGEKEEGIGERGREGGKEGREGRRK-ERKEGREGGREGGKKRGREEGRKGGVKER 255
            +  E  GE+ EG GE   EG +EG E  ++ E +E R    E  ++ G+ +       ER
Sbjct: 1021 VEGEVEGEEGEGEGEE-EEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENER 1079

Query: 256  KEGKEGRR 263
            ++G+E ++
Sbjct: 1080 QDGEEYKK 1087



 Score = 32.3 bits (72), Expect = 0.84
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 15/92 (16%)

Query: 200  EKGGEKEEGIGE-RGREGGKEGREGRRKERKEGREGGR---EGGKKRGREEGR------- 248
            E  GE+EEG  E   RE   EG E RR   +E  E G+    G ++  R++G        
Sbjct: 1031 EGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENERQDGEEYKKVSK 1090

Query: 249  -KGGVKERKEGKEGRREKRKLAIPSNFGKTEK 279
             KG V   K GK    +K+ +      GK ++
Sbjct: 1091 IKGSV---KYGKHKTYQKKSVTNTQGNGKEQR 1119



 Score = 29.3 bits (64), Expect = 7.1
 Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 29/117 (24%)

Query: 179 AEVALGRASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRR----KERKEG-RE 233
           AEV+ G+A  +             GE E+G   RG    +EG  G      +ER++G ++
Sbjct: 634 AEVSEGKAKSV-------------GEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGEKD 680

Query: 234 GGR-------EGGKKRGREE---GRKGGVKERKEGKEGRREKRKLAIPSNFGKTEKG 280
            GR       EG K+   +E    R G  +E+KE ++G +++R   +    G+ E G
Sbjct: 681 KGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEG-GEEEHG 736


>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 245

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 6/81 (7%)

Query: 205 KEEGIGERGREGGKEGREGRRKERKEGREGGREGGKK-----RGREEGRKGGVKERKEGK 259
           ++EG  ER  E  KE RE  +++R+  +E  RE GKK     R +EE  +   +  KE K
Sbjct: 48  RKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENK 107

Query: 260 EG-RREKRKLAIPSNFGKTEK 279
           EG  +EKRK       G+T K
Sbjct: 108 EGEEKEKRKKKEKKERGRTSK 128



 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 204 EKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRR 263
           E+E  I  R +EG KE    R+KER+E  +  RE  K+R RE G+K    ERK+ +  R+
Sbjct: 40  EREREIETR-KEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERK 98

Query: 264 EKRK 267
           ++R+
Sbjct: 99  KRRR 102



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 5/73 (6%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKER---KEGREGGR--EGGKKRGREEGRKGGVKE 254
           +KG  K+E    + R   KE +EG  KE+   KE +E GR  + GK+R R+E RK   ++
Sbjct: 86  KKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERK 145

Query: 255 RKEGKEGRREKRK 267
            +E K+  REK +
Sbjct: 146 ERERKKEEREKER 158



 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 24/67 (35%), Positives = 43/67 (64%), Gaps = 2/67 (2%)

Query: 199 SEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEG 258
           +++G EKE+   +  +E G+  +EG+ +ERKE R+  RE  K+R R++  +   +ERKE 
Sbjct: 106 NKEGEEKEKRKKKEKKERGRTSKEGKERERKEERK--REERKERERKKEEREKERERKER 163

Query: 259 KEGRREK 265
           K+  R++
Sbjct: 164 KKRERKQ 170



 Score = 42.4 bits (98), Expect = 8e-04
 Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 6/73 (8%)

Query: 200 EKGGEKEEGIGERGREGGKEGREG-RRKERKEGREGGREGGKKRGREEGRKGGVKERKE- 257
           E+   K E   ER RE GK+ ++G R+KE +E ++  RE   K G EE  K   KE+KE 
Sbjct: 65  EREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEG-EEKEKRKKKEKKER 123

Query: 258 ---GKEGRREKRK 267
               KEG+  +RK
Sbjct: 124 GRTSKEGKERERK 136



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGV----KER 255
           EK  ++E G  E+  E  KE RE +++ R++  + G E  K++ +E+  +G      KER
Sbjct: 74  EKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKER 133

Query: 256 KEGKEGRREKRK 267
           +  +E +RE+RK
Sbjct: 134 ERKEERKREERK 145



 Score = 40.4 bits (93), Expect = 0.003
 Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 3/83 (3%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKE--GREGGREGGKKRGREEGRKGGVKERKE 257
           EK  E++E      ++ G++  E + KERKE   RE  R+  KK    + R+   KERK+
Sbjct: 155 EKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKK 214

Query: 258 GKEGRREKRKLAIPSNFGKTEKG 280
            KE R+++R+    +N+ + E+G
Sbjct: 215 -KEERKKERQKDRQTNWREKERG 236



 Score = 40.4 bits (93), Expect = 0.003
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 9/74 (12%)

Query: 203 GEKEEGIGERGREGGKEGREGRR-----KERKEGREGGREGGKK----RGREEGRKGGVK 253
           GEKEE   E+ R+  K+    R+     +ERKE RE  +E  KK    + R++ R+   +
Sbjct: 172 GEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWR 231

Query: 254 ERKEGKEGRREKRK 267
           E++ GK  R+E++K
Sbjct: 232 EKERGKRERKERKK 245



 Score = 38.1 bits (87), Expect = 0.015
 Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 14/80 (17%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKE------------RKEGREGGREGGKKRGREEG 247
           EK   K++   ERGR   KEG+E  RKE            +KE RE  RE  K+R + E 
Sbjct: 111 EKEKRKKKEKKERGRTS-KEGKERERKEERKREERKERERKKEEREKERE-RKERKKRER 168

Query: 248 RKGGVKERKEGKEGRREKRK 267
           ++ G KE +  ++ R+E++K
Sbjct: 169 KQVGEKEEERKEKERKERKK 188



 Score = 37.4 bits (85), Expect = 0.026
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 9/75 (12%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERK-------EGREGGREGGKKRGREEGRKGGV 252
           E+  E+E    ER +E  +E +E +++ERK       E +E  R+  KKR R    +   
Sbjct: 142 EERKERERKKEEREKE--RERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKE 199

Query: 253 KERKEGKEGRREKRK 267
           +ERKE +E ++E++K
Sbjct: 200 RERKERRERKKERKK 214



 Score = 36.6 bits (83), Expect = 0.044
 Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 204 EKEEGIGERGREGGKEGREGRRKER-KEGREGGREGGKKRGREEGRKGGVKERKEGKEGR 262
           E+E    + G++  +  R+  R+ER K  RE  +E  ++RG++E +    KE +E K+ R
Sbjct: 42  EREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRR 101

Query: 263 REK 265
           REK
Sbjct: 102 REK 104



 Score = 34.7 bits (78), Expect = 0.17
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 13/81 (16%)

Query: 199 SEKGGEKEEGIGERGREGGKEGREGRRKERKEGRE------------GGREGGKKRGREE 246
           + K G++ E   ER RE  KE RE +++ER++ RE            G +E  +K    +
Sbjct: 126 TSKEGKERERKEERKREERKE-RERKKEEREKERERKERKKRERKQVGEKEEERKEKERK 184

Query: 247 GRKGGVKERKEGKEGRREKRK 267
            RK   + RKE K+ R  K +
Sbjct: 185 ERKKRERNRKERKKERERKER 205


>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
          Length = 282

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 4/64 (6%)

Query: 201 KGGEKEEGIGERGREGGKEGREGR-RKERKEGRE---GGREGGKKRGREEGRKGGVKERK 256
           K GE  +G GE G+E G++ +E   RKE  +G+E   G  +G KK G++   K   KER+
Sbjct: 177 KKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVKEDEKERE 236

Query: 257 EGKE 260
           +GKE
Sbjct: 237 DGKE 240



 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 10/80 (12%)

Query: 198 HSEKGGEKEEGIGERGREGGKEGREGRRK-----ERKEGREG-----GREGGKKRGREEG 247
           + EKG   +E   E+G E GKE + G  K     E+++G++G       E GK++G +E 
Sbjct: 138 NEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEK 197

Query: 248 RKGGVKERKEGKEGRREKRK 267
            +   KE  +GKE    K K
Sbjct: 198 EEEDRKETGDGKENEDGKEK 217



 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 199 SEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGR--KGG----- 251
           +EKGGEK+E +    +   ++ +E    + +E  E G+E   ++G E+G+  K G     
Sbjct: 109 TEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGE 168

Query: 252 -VKERKEGKEGRREKRKLAIPSNFGKTEK 279
             KE+++GK+G   K         G+ EK
Sbjct: 169 DAKEKEDGKKGEDGKGNGEDGKEKGEDEK 197



 Score = 39.7 bits (91), Expect = 0.005
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 7/88 (7%)

Query: 200 EKGGE--KEEGIGERGREGGKEGREGRRKERKEGR-EGGREGGKKRGREEGRK--GGVKE 254
           EKG E  KE+  G    E  KE  +G++ E  +G  E G+E G+    EE RK  G  KE
Sbjct: 151 EKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGDGKE 210

Query: 255 RKEGKE--GRREKRKLAIPSNFGKTEKG 280
            ++GKE   ++E + + +  +  + E G
Sbjct: 211 NEDGKEKGDKKEGKDVKVKEDEKEREDG 238



 Score = 35.4 bits (80), Expect = 0.099
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 11/89 (12%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRK-ERKEGR-------EGGREGGKK-RGREEGRKG 250
           EKG +++E    +    GKE  +G+ K ++KEG+       E  RE GK+  G  E   G
Sbjct: 191 EKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVKEDEKEREDGKEDEGGNEEEAG 250

Query: 251 GVKERKEGKEGRREKRKLAIPSNFGKTEK 279
             KE+++ KE    K +  I  + GK E+
Sbjct: 251 --KEKEDLKEEEEGKEEDEIKEDDGKKEE 277



 Score = 29.3 bits (64), Expect = 7.1
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 205 KEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRRE 264
           KEE I +   +GG E +E    E K   E  +E  + +  E+G  G   + ++G+E  +E
Sbjct: 101 KEENIEDATEKGG-EKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDGKE 159

Query: 265 KR 266
            +
Sbjct: 160 DK 161


>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 290

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 6/60 (10%)

Query: 211 ERGREGGKEGRE--GRRKERKEGREGGREGGKKRGREEGRKGGVKER-KEGKEGRREKRK 267
           ER RE  +EG     RR+ER+  R+ G+E  ++R R+E RK   KER KE K+ R+EK+K
Sbjct: 216 ERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERK---KERKKERKKERKEKKK 272



 Score = 35.8 bits (81), Expect = 0.076
 Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 204 EKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGRE---EGRKGGVKERKEGKE 260
           EK+  I ER RE  +E ++GR +ER  GRE  R+  +++ RE   E  + G +E +  +E
Sbjct: 116 EKQTEI-ERDRE--REKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERE 172

Query: 261 GRREKRK 267
             RE+ K
Sbjct: 173 RDREREK 179



 Score = 34.7 bits (78), Expect = 0.17
 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGK--KRGRE-EGRKGGVKERK 256
           E+   +E+   ER R+  K  RE RRKE++  R   RE     +R RE E +KG  +ER 
Sbjct: 80  ERDRVREKTEKERDRDR-KRDRERRRKEKETNRNRDREKQTEIERDREREKQKGRERERD 138

Query: 257 EGKEGRREK 265
            G+E  R++
Sbjct: 139 RGRERERDR 147



 Score = 32.0 bits (71), Expect = 1.1
 Identities = 18/69 (26%), Positives = 34/69 (49%)

Query: 198 HSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKE 257
           H +  G+  +   +R RE  ++ R+  RK  +E R   +E  + R RE+  +      +E
Sbjct: 69  HKDADGDDRQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDRERE 128

Query: 258 GKEGRREKR 266
            ++GR  +R
Sbjct: 129 KQKGRERER 137



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 6/68 (8%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           E+  E+E+   ++GRE  +E   GR +ER   RE  RE   ++ R +G++    ER+  +
Sbjct: 122 ERDREREK---QKGRE--RERDRGRERERDRDREKERERQTEKDR-DGQRETETERERDR 175

Query: 260 EGRREKRK 267
           E  ++K +
Sbjct: 176 EREKQKER 183



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 8/66 (12%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           +KG E+E    +RGRE  +E    R KER+   E  R+G ++   E  R    +ER++ K
Sbjct: 130 QKGRERER---DRGRE--RERDRDREKERERQTEKDRDGQRETETERERD---REREKQK 181

Query: 260 EGRREK 265
           E   E+
Sbjct: 182 ERETER 187



 Score = 31.2 bits (69), Expect = 1.9
 Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 7/63 (11%)

Query: 207 EGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK--EGRRE 264
           EG  E  R   ++    R KER   RE  R+  +K+ R++ RK   KERKE K  E RRE
Sbjct: 224 EGERETDRRRERQRDRDRGKER--DRERDRKEERKKERKKERK---KERKEKKKEEKRRE 278

Query: 265 KRK 267
            +K
Sbjct: 279 DKK 281



 Score = 30.0 bits (66), Expect = 4.1
 Identities = 16/57 (28%), Positives = 27/57 (47%)

Query: 208 GIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRRE 264
           G+G+  ++   + R+  R   +E  E  R+  +KR RE  RK     R   +E + E
Sbjct: 64  GLGQAHKDADGDDRQRERDRVREKTEKERDRDRKRDRERRRKEKETNRNRDREKQTE 120



 Score = 29.6 bits (65), Expect = 5.4
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 2/51 (3%)

Query: 211 ERGREGGKEG--REGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           +R R+ GKE      R++ERK+ R+  R+  +K  ++E ++   K+RK G+
Sbjct: 236 QRDRDRGKERDRERDRKEERKKERKKERKKERKEKKKEEKRREDKKRKWGE 286



 Score = 28.9 bits (63), Expect = 9.2
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 7/66 (10%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           E+  +++E    R RE   E    R +E+++GRE  R     RGRE  R    ++R++ +
Sbjct: 101 ERRRKEKETNRNRDREKQTEIERDREREKQKGRERER----DRGRERERD---RDREKER 153

Query: 260 EGRREK 265
           E + EK
Sbjct: 154 ERQTEK 159


>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 202

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 199 SEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKER-KE 257
           + KGG + +   ER R+  +E +  R +ER+  RE  RE  ++R R   R+   KER KE
Sbjct: 115 NRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKE 174

Query: 258 GKEGRREKRK 267
            K+ R+EK+K
Sbjct: 175 RKKERKEKKK 184



 Score = 36.2 bits (82), Expect = 0.058
 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 7/64 (10%)

Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGV-------KERKEGKEGRR 263
           ER R+GG+E  +   +ER   RE  R+  ++R R+  RK           ER+E K+ R+
Sbjct: 113 ERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERK 172

Query: 264 EKRK 267
           ++RK
Sbjct: 173 KERK 176



 Score = 35.0 bits (79), Expect = 0.13
 Identities = 17/57 (29%), Positives = 32/57 (56%)

Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
           ER ++  +E +    + R+  R+GGRE  K+  RE  R+   + ++E +  R+ +RK
Sbjct: 95  ERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERK 151



 Score = 33.5 bits (75), Expect = 0.38
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
           ER R+  +E  + R +ERK   +  RE  +K GRE  ++    ER+  +E  R++++
Sbjct: 87  ERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQ---TERERDRERERQRQR 140



 Score = 32.3 bits (72), Expect = 0.84
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)

Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
           +R R+  +E +    +ER + R+  R+    R RE  RKGG +ER +  E  R++ +
Sbjct: 79  QRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGG-RERDKQTERERDRER 134



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
           +R RE  +E    R + RK GRE  ++  ++R RE  R+   +  +E +  R  KR+
Sbjct: 99  DRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQR--QRERERQRQRERKRE 153



 Score = 30.8 bits (68), Expect = 2.4
 Identities = 19/67 (28%), Positives = 34/67 (50%)

Query: 214 REGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRKLAIPSN 273
           RE  +E ++ R ++R+  RE  RE  ++R R+  R+   +  +E  + R  +RK     N
Sbjct: 52  REKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRN 111

Query: 274 FGKTEKG 280
             +  KG
Sbjct: 112 RERNRKG 118



 Score = 29.3 bits (64), Expect = 7.1
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)

Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKE--RKEGKEGRREKRK 267
           ER RE  +E   G+  ER+  R+  RE   +R     ++   +E  R+  +E  RE++K
Sbjct: 2   ERQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQK 60



 Score = 28.9 bits (63), Expect = 9.2
 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 5/68 (7%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           E   E+E    +R R   ++ +  R KER+  +E  R+  ++R RE  R+    ER+  +
Sbjct: 28  ENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQ--RQRERETERE---TERQRER 82

Query: 260 EGRREKRK 267
           + +RE+++
Sbjct: 83  QRQRERKR 90


>gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]
          Length = 1113

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 60/224 (26%), Positives = 89/224 (39%), Gaps = 46/224 (20%)

Query: 70  MSLKQKCHDVVSKTREQQTYLESAHPQPKTSQ-------------------HSPWHVKPH 110
           ++L++  H VV  +   + YL S  P   T                     + P ++ PH
Sbjct: 95  LNLQRPVHHVVPPSTVTEDYLRSFRPYHTTDDLRMSSLPPLGLDPATAAAYYHPSYLAPH 154

Query: 111 PH---GCREQSSECTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVAS 167
           P      R   S C  +       L   F  IP   S  P H +         A+    S
Sbjct: 155 PFPHPAFRMDDSYCLSA-------LRSPFYPIPTPGSLPPLHPS---------AMHLHLS 198

Query: 168 LIRGTVGCDSHAEVALGRASRIFGL--EYFPLHSEKGGEKEEGIGERGREGGKEGREGRR 225
            +R      SH+ +A   + R+ GL  E   +  E   E+E    ER RE  +E    R 
Sbjct: 199 GVRYPPEL-SHSSLAALHSERMSGLSAERLQMDEELRRERER---EREREREREADRERE 254

Query: 226 KERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRKLA 269
           KER+  RE  RE  K+R RE+ R+  ++ ++E  +  REK  LA
Sbjct: 255 KEREREREKEREQEKEREREKERERELERQRE--QRAREKELLA 296


>gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]
          Length = 1217

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 60/224 (26%), Positives = 89/224 (39%), Gaps = 46/224 (20%)

Query: 70  MSLKQKCHDVVSKTREQQTYLESAHPQPKTSQ-------------------HSPWHVKPH 110
           ++L++  H VV  +   + YL S  P   T                     + P ++ PH
Sbjct: 199 LNLQRPVHHVVPPSTVTEDYLRSFRPYHTTDDLRMSSLPPLGLDPATAAAYYHPSYLAPH 258

Query: 111 PH---GCREQSSECTESSAGHGLHLSLLFQEIPVLTSWLPAHFALSGAEGKEVALSTVAS 167
           P      R   S C  +       L   F  IP   S  P H +         A+    S
Sbjct: 259 PFPHPAFRMDDSYCLSA-------LRSPFYPIPTPGSLPPLHPS---------AMHLHLS 302

Query: 168 LIRGTVGCDSHAEVALGRASRIFGL--EYFPLHSEKGGEKEEGIGERGREGGKEGREGRR 225
            +R      SH+ +A   + R+ GL  E   +  E   E+E    ER RE  +E    R 
Sbjct: 303 GVRYPPEL-SHSSLAALHSERMSGLSAERLQMDEELRRERER---EREREREREADRERE 358

Query: 226 KERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRKLA 269
           KER+  RE  RE  K+R RE+ R+  ++ ++E  +  REK  LA
Sbjct: 359 KEREREREKEREQEKEREREKERERELERQRE--QRAREKELLA 400


>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
          Length = 1564

 Score = 42.4 bits (98), Expect = 8e-04
 Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 4/68 (5%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           E+  EKE    ER RE  +  RE R +ER+  RE  RE  ++R +E  R+   +++ +G+
Sbjct: 742 ERDREKER---EREREERERERE-RERERERERERERERARERDKERERQRDWEDKDKGR 797

Query: 260 EGRREKRK 267
           + RREKR+
Sbjct: 798 DDRREKRE 805



 Score = 38.1 bits (87), Expect = 0.015
 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           EK  E+E    ER RE  +E    R +ER+  RE  +E  ++R  E+  KG   +R+E +
Sbjct: 746 EKEREREREERERERERERERERERERERERARERDKERERQRDWEDKDKGR-DDRREKR 804

Query: 260 EGRREKR 266
           E  RE R
Sbjct: 805 EEIREDR 811



 Score = 37.7 bits (86), Expect = 0.020
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 4/69 (5%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGR-KGGVKERKEG 258
           E+  E+E    ER RE  +E  + R  ER+  RE  RE  K+R RE  R +   +ER+  
Sbjct: 684 ERDRERER---ERERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERE 740

Query: 259 KEGRREKRK 267
           +E  REK +
Sbjct: 741 RERDREKER 749



 Score = 37.0 bits (84), Expect = 0.034
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)

Query: 197 LHSEKGGEKE-EGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKER 255
           L  E+  E+E E   ER RE  ++    R +ER+  RE  RE  ++R REE  +   +ER
Sbjct: 707 LERERAREREREREKERDRERDRDRDHDRERERE--RERDREKEREREREERERERERER 764

Query: 256 KEGKEGRREKRK 267
           +  +E  RE+ +
Sbjct: 765 ERERERERERER 776



 Score = 35.8 bits (81), Expect = 0.076
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 1/69 (1%)

Query: 200 EKGGEKE-EGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEG 258
           EK  E E E   ER RE  KE    R ++R   RE  RE  + R +E  R+   +ER+  
Sbjct: 702 EKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKEREREREERERERE 761

Query: 259 KEGRREKRK 267
           +E  RE+ +
Sbjct: 762 RERERERER 770



 Score = 34.7 bits (78), Expect = 0.17
 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREK 265
           ER RE  +E    R +ER+  RE  RE  K+R  E  R    +ER+  KE  RE+
Sbjct: 674 ERARERDRERERDRERERERERERDREREKERELERER-AREREREREKERDRER 727



 Score = 32.0 bits (71), Expect = 1.1
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           E+  E+++   ER R+   E ++  R +R+E RE  RE    R   + RK   + R EG 
Sbjct: 775 ERARERDK---ERERQRDWEDKDKGRDDRREKREEIREDRNPRDGHDERKSKKRYRNEGS 831

Query: 260 EGRREKRK 267
              R+  K
Sbjct: 832 PSPRQSPK 839



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           E+   +EE   +R  +   E    R +ER+  RE  RE  ++R RE  ++  + ER+  +
Sbjct: 655 ERDERREERRVDRVDDRRDERARERDRERERDRERERERERERDREREKEREL-ERERAR 713

Query: 260 EGRREKRK 267
           E  RE+ K
Sbjct: 714 EREREREK 721



 Score = 29.3 bits (64), Expect = 7.1
 Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           EK  ++E    +R R+  +E    R ++R++ RE  RE  ++R RE  R+   +ER+  +
Sbjct: 720 EKERDRER---DRDRDHDRERERERERDREKERERERE-ERERERERERE-RERERERER 774

Query: 260 EGRREKRK 267
           E  RE+ K
Sbjct: 775 ERARERDK 782


>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
           sapiens]
          Length = 729

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 21/63 (33%), Positives = 42/63 (66%), Gaps = 3/63 (4%)

Query: 208 GIGERG-REGGKEGREGRR--KERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRRE 264
           G+ E G +E  +EG+EG+   KE+K+ ++ G+E  +K  +++ +    K+++EGKE RR 
Sbjct: 631 GLEEAGPKESSEEGKEGKTPSKEKKKKKKKGKEEEEKAAKKKSKHKKSKDKEEGKEERRR 690

Query: 265 KRK 267
           +++
Sbjct: 691 RQQ 693



 Score = 31.2 bits (69), Expect = 1.9
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 14/68 (20%)

Query: 193 EYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKR---------- 242
           + F L  E+ G KE    E G+EG    +E ++K++K+G+E   +  KK+          
Sbjct: 626 DLFGLGLEEAGPKESS--EEGKEGKTPSKE-KKKKKKKGKEEEEKAAKKKSKHKKSKDKE 682

Query: 243 -GREEGRK 249
            G+EE R+
Sbjct: 683 EGKEERRR 690


>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 275

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 10/72 (13%)

Query: 200 EKGGEKEEGIGERG----REGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKER 255
           EK  ++E G  E+     RE GKE RE +RKER++ R+  RE  +++ ++E +K   +ER
Sbjct: 51  EKERKRERGKKEKKKRKKRERGKE-RERKRKEREKQRKERREKERRKRKKEKKK---RER 106

Query: 256 KEGKEGRREKRK 267
           K+   GRRE++K
Sbjct: 107 KQ--RGRRERKK 116



 Score = 40.8 bits (94), Expect = 0.002
 Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 2/70 (2%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEG--REGGREGGKKRGREEGRKGGVKERKE 257
           E+G E+E    ER ++  +   + RRK +KE   RE  + G ++R +++ RK   +E K+
Sbjct: 70  ERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQ 129

Query: 258 GKEGRREKRK 267
            +E +R+KR+
Sbjct: 130 RRERKRKKRR 139



 Score = 40.0 bits (92), Expect = 0.004
 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 11/68 (16%)

Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKK-----------RGREEGRKGGVKERKEGK 259
           +R  E  KE RE  +++R+  +E  RE GKK           + RE  RK   K+RKE +
Sbjct: 31  QRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERR 90

Query: 260 EGRREKRK 267
           E  R KRK
Sbjct: 91  EKERRKRK 98



 Score = 40.0 bits (92), Expect = 0.004
 Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 2/67 (2%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           E+  EKE G  ER R+  K  +E R K+R+  R+  ++  +++ R E +K   KER++ K
Sbjct: 146 ERKREKERGKRERKRK--KRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKK 203

Query: 260 EGRREKR 266
           E +++++
Sbjct: 204 ERKKDRK 210



 Score = 39.7 bits (91), Expect = 0.005
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 7/75 (9%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGG-----REGGKKRGREEGRKGGVKE 254
           E+   + E    R R+  K  ++ RRKERK  +E G     R+  KK  RE+ R+   KE
Sbjct: 119 ERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKE 178

Query: 255 RKEGKE--GRREKRK 267
           RK+ +E   RRE++K
Sbjct: 179 RKKERERKERRERKK 193



 Score = 38.9 bits (89), Expect = 0.009
 Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 201 KGGEKEEGIGERGREGGKEGREGRRKERK-EGREGGREGGKKRGREEGRKGGVKERKEGK 259
           K   K++   ER RE  +  RE +RK+RK E RE  RE  +K  ++E  +   +ERK  K
Sbjct: 136 KKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERK--K 193

Query: 260 EGRREKRKLAIPSNFGKTEK 279
           E ++E+RK        KT++
Sbjct: 194 ERKKERRKKKERKKDRKTDR 213



 Score = 37.4 bits (85), Expect = 0.026
 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 5/69 (7%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           EK   + +  G R R+  KE +E R +E K+ RE  R   KKR +++ RK   +E++ GK
Sbjct: 100 EKKKRERKQRGRRERKKKKERKE-RERENKQRRERKR---KKRRKKKRRKERKREKERGK 155

Query: 260 -EGRREKRK 267
            E +R+KRK
Sbjct: 156 RERKRKKRK 164



 Score = 37.4 bits (85), Expect = 0.026
 Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 2/64 (3%)

Query: 204 EKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRR 263
           +K++   ER RE  +     R+K RK+ R   R+  K+RG+ E ++   K +KE +E +R
Sbjct: 115 KKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKR--KKRKKEEREKKR 172

Query: 264 EKRK 267
           E+ +
Sbjct: 173 ERNR 176



 Score = 37.0 bits (84), Expect = 0.034
 Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 203 GEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGR 262
           G +E    +  +E  +E ++ R ++RK+ R+  R   +KR +E G++   ++RK+ K+  
Sbjct: 110 GRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKR--ERKRKKRKKEE 167

Query: 263 REKRK 267
           REK++
Sbjct: 168 REKKR 172



 Score = 35.8 bits (81), Expect = 0.076
 Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 9/68 (13%)

Query: 204 EKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK---- 259
           +KE+   ER + G +E     RK++KE +E  RE  ++R R+  ++   K RKE K    
Sbjct: 98  KKEKKKRERKQRGRRE-----RKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKE 152

Query: 260 EGRREKRK 267
            G+RE+++
Sbjct: 153 RGKRERKR 160



 Score = 34.7 bits (78), Expect = 0.17
 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 6/74 (8%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGG------KKRGREEGRKGGVK 253
           +K  E++E   E  +   ++ ++ R+K+R++ R+  +E G      KKR +EE  K   +
Sbjct: 115 KKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRER 174

Query: 254 ERKEGKEGRREKRK 267
            RKE K+ R  K +
Sbjct: 175 NRKERKKERERKER 188



 Score = 34.3 bits (77), Expect = 0.22
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 185 RASRIFGLEYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGR 244
           R  R  G E      E+  +++E   +  R+  KE ++  RK+R     G RE  KK+ R
Sbjct: 66  RKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQR-----GRRERKKKKER 120

Query: 245 EEGRKGGVKERKEGKEGRREKRK 267
           +E R+   K+R+E K  +R K+K
Sbjct: 121 KE-RERENKQRRERKRKKRRKKK 142


>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
           sapiens]
          Length = 600

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 18/56 (32%), Positives = 35/56 (62%)

Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKR 266
           E+ R+G +E  + R +E+    E GRE G++R +++GR+   + + + + GR+ KR
Sbjct: 405 EKDRDGQRETEKQREREKDRESERGRERGREREKQKGRERDRERQTDRQAGRQRKR 460



 Score = 38.1 bits (87), Expect = 0.015
 Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 200 EKGGEKE-EGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGRE-EGRKGGVKERKE 257
           +K  E+E E  GERGR+   +G+  R ++R   +E  R+  ++R R+ E  +   +ER++
Sbjct: 124 QKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREK 183

Query: 258 GKEGRREKRKLAIPSNFGKTE 278
            ++ RRE+ +     N  KTE
Sbjct: 184 NRQERRERERQREKEN--KTE 202



 Score = 37.0 bits (84), Expect = 0.034
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)

Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREK 265
           ER R+ G+EGR  R+ ER+  RE  R+    R REE  +   ++R++ +E + EK
Sbjct: 354 ERNRQTGREGR--RQAERERERERERDRQSAREREERERDRDRDRQKERERQTEK 406



 Score = 36.2 bits (82), Expect = 0.058
 Identities = 20/59 (33%), Positives = 31/59 (52%)

Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRKLA 269
           ER RE  +E    R KER+  R+   E  ++R R+ GR+G  +  +E +  R   R+ A
Sbjct: 324 ERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSA 382



 Score = 35.4 bits (80), Expect = 0.099
 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           E+  E+E    +R RE  +E    R++E +  RE  RE  +KR  E  R+   + R+ G+
Sbjct: 306 ERERERERN-RKRERERERERERERQRETERDREKERERKRKRQTEMDRE---RNRQTGR 361

Query: 260 EGRREKRK 267
           EGRR+  +
Sbjct: 362 EGRRQAER 369



 Score = 35.0 bits (79), Expect = 0.13
 Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 5/57 (8%)

Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
           ER R+  ++ ++ R ++ ++ R+G RE  K+R RE+ R     E + G+E  RE+ K
Sbjct: 387 ERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDR-----ESERGRERGREREK 438



 Score = 34.3 bits (77), Expect = 0.22
 Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           E+  E+E    ER RE  ++  + R ++RK   E  RE  ++ GR EGR+   +ER+  +
Sbjct: 320 ERERERER---ERQRETERDREKERERKRKRQTEMDRERNRQTGR-EGRRQAERERERER 375

Query: 260 EGRREKRK 267
           E  R+  +
Sbjct: 376 ERDRQSAR 383



 Score = 34.3 bits (77), Expect = 0.22
 Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 211 ERGREGGKEGREGRRKERKEGREGGRE-GGKKRGREEGR-KGGVKERKEGKEGRREKRKL 268
           + GREG ++    R +ER+  R+  RE   ++R R+  R K   ++ ++ ++G+RE  K 
Sbjct: 358 QTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQ 417

Query: 269 AIPSNFGKTEKG 280
                  ++E+G
Sbjct: 418 REREKDRESERG 429



 Score = 33.9 bits (76), Expect = 0.29
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           EK  + E+   ERGRE  +E       ERK   +  R+  +K  RE   K   +ER   +
Sbjct: 196 EKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTERER-EKQAERERASER 254

Query: 260 EGRREKRK 267
           E  R+K +
Sbjct: 255 ETERDKER 262



 Score = 33.9 bits (76), Expect = 0.29
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
           +R R   ++    R++ER+  RE  RE  +KR RE  R+   +ER+  +E  R++ K
Sbjct: 286 KRQRRTERDRETERKRERQRERERERERNRKRERERERE---RERERQRETERDREK 339



 Score = 33.9 bits (76), Expect = 0.29
 Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 21/86 (24%)

Query: 199 SEKGGEKEEGIGERGREGGKEGRE-------GRRKER----KEGREGGREGGKKRGREEG 247
           +E+  E+E    ER R+  +E  E        R+KER    ++ R+G RE  K+R RE+ 
Sbjct: 367 AERERERER---ERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKD 423

Query: 248 R-------KGGVKERKEGKEGRREKR 266
           R       +G  +E+++G+E  RE++
Sbjct: 424 RESERGRERGREREKQKGRERDRERQ 449



 Score = 33.5 bits (75), Expect = 0.38
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
           ER RE  +  +  R +ER+  RE  RE    R R+  R+   KER   KE  RE  +
Sbjct: 80  ERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQRE---KERNRQKERERETER 133



 Score = 33.1 bits (74), Expect = 0.49
 Identities = 18/57 (31%), Positives = 30/57 (52%)

Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
           ER RE  ++    R +ER+  R   RE  ++R RE  R+   +  +E +  R+ KR+
Sbjct: 292 ERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQ 348



 Score = 32.7 bits (73), Expect = 0.64
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 5/70 (7%)

Query: 200 EKGGEKE-EGIGERGREGGKE-GREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKE 257
           E+  E+E E   ER RE  ++  R+ R+KER+   +  R+   +R RE  RK   +ER+ 
Sbjct: 249 ERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERK---RERQR 305

Query: 258 GKEGRREKRK 267
            +E  RE+ +
Sbjct: 306 ERERERERNR 315



 Score = 32.0 bits (71), Expect = 1.1
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 8/85 (9%)

Query: 198 HSEKGGEKE---EGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKE 254
           H E+  ++E   E   +R R+  +E    R+KER+  RE  REG  +RGR+  +  G +E
Sbjct: 94  HRERQRDREKERERQTDRERDRQREKERNRQKERE--RETEREG--ERGRDR-QTDGQRE 148

Query: 255 RKEGKEGRREKRKLAIPSNFGKTEK 279
           R+  ++  +E+ +        +TE+
Sbjct: 149 RERQRDAEKERERQTDRERQRQTER 173



 Score = 32.0 bits (71), Expect = 1.1
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 7/59 (11%)

Query: 211 ERGREGGKEGREGRRKE--RKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
           ER RE  +E +  R+ E  R+  R+ GREG ++  RE  R     ER+  ++  RE+ +
Sbjct: 334 ERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERER-----ERERDRQSAREREE 387



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 13/95 (13%)

Query: 198 HSEKGGEKE-----EGIGERGREGGKEGREGRRKERKEGREGGREGG--------KKRGR 244
           HSE+G E+E     E   ER R+  +E    R+ ER+  ++  RE          K+R R
Sbjct: 205 HSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERER 264

Query: 245 EEGRKGGVKERKEGKEGRREKRKLAIPSNFGKTEK 279
           E  R      R++ +E + ++++        +TE+
Sbjct: 265 ERDRDRDRDRRQKERERQTDRKRQRRTERDRETER 299



 Score = 29.6 bits (65), Expect = 5.4
 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 12/82 (14%)

Query: 198 HSEKGGEKEEGIGERGREGGKEGREG---------RRKERKEGREGGREGGKKRGREEGR 248
           H +  G+  E   ++ RE  +E R+          RR+E+   R+  R   ++R RE+ R
Sbjct: 46  HKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKER 105

Query: 249 KGGV---KERKEGKEGRREKRK 267
           +      ++R+  KE  R+K +
Sbjct: 106 ERQTDRERDRQREKERNRQKER 127



 Score = 29.6 bits (65), Expect = 5.4
 Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 8/72 (11%)

Query: 200 EKGGEKE-EGIGERGR----EGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKE 254
           E+G +++ +G  ER R    E  +E +  R ++R+  R   +E  +++ R+E R+   +E
Sbjct: 136 ERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRE---RE 192

Query: 255 RKEGKEGRREKR 266
           R+  KE + E R
Sbjct: 193 RQREKENKTEDR 204



 Score = 29.3 bits (64), Expect = 7.1
 Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 9/52 (17%)

Query: 199 SEKGGEKEEGI-GERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRK 249
           +EK  E+E+    ERGRE G+E      +E+++GRE  RE  ++  R+ GR+
Sbjct: 414 TEKQREREKDRESERGRERGRE------REKQKGRERDRE--RQTDRQAGRQ 457



 Score = 28.9 bits (63), Expect = 9.2
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 7/74 (9%)

Query: 201 KGGEKEEGIGERGREGGKEGREGRRKERKE--GREGGREGGKKRGREEGR-----KGGVK 253
           K   + E    R R+  +E +  R KER+    RE  R+  K+R R++ R     + G +
Sbjct: 78  KRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGER 137

Query: 254 ERKEGKEGRREKRK 267
            R    +G+RE+ +
Sbjct: 138 GRDRQTDGQRERER 151



 Score = 28.9 bits (63), Expect = 9.2
 Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           E+  E++       R+  +E +  R+++R+  R+   E  ++R RE  R+   +ER   +
Sbjct: 261 ERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERE---RERNRKR 317

Query: 260 EGRREKRK 267
           E  RE+ +
Sbjct: 318 ERERERER 325


>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
           containing B [Homo sapiens]
          Length = 546

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 8/63 (12%)

Query: 211 ERGREGGKEGREGRR------KERKEGREGGREGGKKRGREEGRKGGVKER--KEGKEGR 262
           +R RE  KE   GRR      KER   RE  RE  ++R +E+  +G V+E+  KE K+ R
Sbjct: 351 DRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDR 410

Query: 263 REK 265
           R +
Sbjct: 411 RHR 413



 Score = 31.2 bits (69), Expect = 1.9
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           E+G E+E+   ER RE  KE R     E K+ +E   +    R   + ++   KE+K  +
Sbjct: 373 ERGNEREKE-RERSRERSKEQRSRGEVEEKKHKEDKDD----RRHRDDKRDSKKEKKHSR 427

Query: 260 EGRREK--RKLAIPSNFGKTEKGFS 282
              RE+  R  +   N GK  +  S
Sbjct: 428 SRSRERKHRSRSRSRNAGKRSRSRS 452



 Score = 29.6 bits (65), Expect = 5.4
 Identities = 35/122 (28%), Positives = 43/122 (35%), Gaps = 26/122 (21%)

Query: 171 GTVGCDSHAEVALGRASR-IFGLEYFPLHSEKGGEKEEGIG--------ERGREGGKEGR 221
           G    D H E    R+ R        P  S       EG G        ER +E  +  R
Sbjct: 247 GAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLER 306

Query: 222 EG--RRKERKEG----------REGGREGGKKRGREEGRKGGVKER-----KEGKEGRRE 264
           E   R KER+            R   RE  + R R   RKG  ++R     KE + GRR 
Sbjct: 307 EAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRR 366

Query: 265 KR 266
            R
Sbjct: 367 DR 368



 Score = 28.9 bits (63), Expect = 9.2
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 212 RGREGGKEG-REGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKR 266
           R R   ++G R  R +ER++  E GR   +   +E G +   KER+  +E  +E+R
Sbjct: 339 RSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNE-REKERERSRERSKEQR 393



 Score = 28.9 bits (63), Expect = 9.2
 Identities = 17/82 (20%), Positives = 29/82 (35%)

Query: 198 HSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKE 257
           H E   ++     +R  +  K+    R +ERK           KR R   ++   K + E
Sbjct: 403 HKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNE 462

Query: 258 GKEGRREKRKLAIPSNFGKTEK 279
            KE   ++ +          EK
Sbjct: 463 SKEKSNKRSRSGSQGRTDSVEK 484


>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
          Length = 843

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 211 ERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRKL 268
           ER RE  +E    R +ER+  RE  RE  ++R RE+ +K   ++R+E +E   E+RKL
Sbjct: 392 EREREREREREREREREREREREREREREREREREKDKK---RDREEDEEDAYERRKL 446



 Score = 37.7 bits (86), Expect = 0.020
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           E+  E+E    ER RE  +E    R +ER+  RE  RE  KKR REE  +   + RK  +
Sbjct: 392 ERERERER---EREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLER 448

Query: 260 EGRREK 265
           + R ++
Sbjct: 449 KLREKE 454



 Score = 34.3 bits (77), Expect = 0.22
 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 207 EGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKR 266
           E   +R ++  +   + R +ER+  RE  RE  ++R RE  R+   +ER+  +E  REK 
Sbjct: 372 ERSSDRNKDRSRSREKSRDRERERERERERERERERERERERE---REREREREREREKD 428

Query: 267 K 267
           K
Sbjct: 429 K 429



 Score = 32.7 bits (73), Expect = 0.64
 Identities = 19/67 (28%), Positives = 33/67 (49%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           E+  E+E    ER RE  +E  + + +ER+  R+  R+  K+R R+  R+      +E  
Sbjct: 315 ERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERS 374

Query: 260 EGRREKR 266
             R + R
Sbjct: 375 SDRNKDR 381



 Score = 32.3 bits (72), Expect = 0.84
 Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 8/64 (12%)

Query: 204 EKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRR 263
           E+E+G  E+ R+  ++ R  R +ER+  RE  RE  ++R RE       +ER++ KE  R
Sbjct: 292 EEEKGKKEKERQEIEKERRERERERERERE-RRERERERERE-------REREKEKERER 343

Query: 264 EKRK 267
           E+ +
Sbjct: 344 ERER 347



 Score = 30.4 bits (67), Expect = 3.2
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           E+  E+E    ER RE  +E    + KER+  RE  R+  + + R+  R     +R+  +
Sbjct: 313 ERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDR-----DRERDR 367

Query: 260 EGRREK 265
           +  RE+
Sbjct: 368 DRDRER 373


>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
           [Homo sapiens]
          Length = 916

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 11/103 (10%)

Query: 196 PLHSEKGGEKEEGIGERGREGGKEGREGRRKER----KEG----REGGREGGKKRGREEG 247
           P   E+ GEKEE  G+   E   EG +  + E     KEG     EG +E G+     EG
Sbjct: 518 PEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEG 577

Query: 248 RKGGVKERKEGKEGRRE---KRKLAIPSNFGKTEKGFSSLYKT 287
            +   KE K+ +E   E   K +L   +   K EK  S + K+
Sbjct: 578 EEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKS 620



 Score = 35.0 bits (79), Expect = 0.13
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 196 PLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKER 255
           PL  EK  EK  G G    EG  +G +G RKE      G  EG ++  +E   KG  +E 
Sbjct: 767 PLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKE-DIAVNGEVEGKEEVEQETKEKGSGREE 825

Query: 256 KEG 258
           ++G
Sbjct: 826 EKG 828



 Score = 30.8 bits (68), Expect = 2.4
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 7/60 (11%)

Query: 214 REGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKE------RKEGKEGRREKRK 267
           +E  +EG+  ++++ KE + GG  G ++ G ++G KG  KE        EGKE   ++ K
Sbjct: 759 KETKEEGKPLQQEKEKE-KAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETK 817


>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
           [Homo sapiens]
          Length = 540

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 11/103 (10%)

Query: 196 PLHSEKGGEKEEGIGERGREGGKEGREGRRKER----KEG----REGGREGGKKRGREEG 247
           P   E+ GEKEE  G+   E   EG +  + E     KEG     EG +E G+     EG
Sbjct: 142 PEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEG 201

Query: 248 RKGGVKERKEGKEGRRE---KRKLAIPSNFGKTEKGFSSLYKT 287
            +   KE K+ +E   E   K +L   +   K EK  S + K+
Sbjct: 202 EEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKS 244



 Score = 35.0 bits (79), Expect = 0.13
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 196 PLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKER 255
           PL  EK  EK  G G    EG  +G +G RKE      G  EG ++  +E   KG  +E 
Sbjct: 391 PLQQEKEKEKAGGEGGSEEEGSDKGAKGSRKE-DIAVNGEVEGKEEVEQETKEKGSGREE 449

Query: 256 KEG 258
           ++G
Sbjct: 450 EKG 452



 Score = 30.8 bits (68), Expect = 2.4
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 7/60 (11%)

Query: 214 REGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKE------RKEGKEGRREKRK 267
           +E  +EG+  ++++ KE + GG  G ++ G ++G KG  KE        EGKE   ++ K
Sbjct: 383 KETKEEGKPLQQEKEKE-KAGGEGGSEEEGSDKGAKGSRKEDIAVNGEVEGKEEVEQETK 441


>gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo
           sapiens]
          Length = 437

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 19/62 (30%), Positives = 32/62 (51%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           E G +  +G  E+GR+  +E R   R ER+  R+  R+  + R  + G +G  + R E +
Sbjct: 334 ELGPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEAR 393

Query: 260 EG 261
            G
Sbjct: 394 GG 395



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 16/94 (17%)

Query: 198 HSEKGGEKEEGIGERGREGGKE-------GREGRRKER---KEGREGGREGGKKRGREEG 247
           H ++  ++E    ER RE  KE        R+ RR+ R   KE R   RE  K + R+  
Sbjct: 230 HRDRDRDRERERRERSRERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRK 289

Query: 248 RKGGV------KERKEGKEGRREKRKLAIPSNFG 275
           R+         +ER+  +E R     +A PS  G
Sbjct: 290 RRSSRSRERARRERERKEELRGGGGDMAEPSEAG 323



 Score = 30.0 bits (66), Expect = 4.1
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 209 IGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKE-GRREKR 266
           +G  G +G +E    R +ER+      RE  + R R+  R    K  + G E GR E R
Sbjct: 335 LGPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEAR 393


>gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
           sapiens]
          Length = 375

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 7/73 (9%)

Query: 199 SEKGGEKEEGIGERGREGGKEGREG----RRKERKEGREGGREGGKKRGREEGRKGGVKE 254
           SE+  +KE    ++GRE       G    +RKERK  R  GR   + R RE   +   +E
Sbjct: 26  SEEHNDKEHS-SDKGRERLNSSENGEDRHKRKERKSSR--GRSHSRSRSRERRHRSRSRE 82

Query: 255 RKEGKEGRREKRK 267
           RK+ +   RE++K
Sbjct: 83  RKKSRSRSRERKK 95



 Score = 33.9 bits (76), Expect = 0.29
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 197 LHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERK 256
           L+S + GE      ER    G+     R +ER+  R   RE  K R R   RK      +
Sbjct: 43  LNSSENGEDRHKRKERKSSRGRSHSRSRSRERRH-RSRSRERKKSRSRSRERKKSRSRSR 101

Query: 257 EGKEGRREKRK 267
           E K+ R   R+
Sbjct: 102 ERKKSRSRSRE 112


>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
           sapiens]
          Length = 434

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 7/73 (9%)

Query: 199 SEKGGEKEEGIGERGREGGKEGREG----RRKERKEGREGGREGGKKRGREEGRKGGVKE 254
           SE+  +KE    ++GRE       G    +RKERK  R  GR   + R RE   +   +E
Sbjct: 85  SEEHNDKEHS-SDKGRERLNSSENGEDRHKRKERKSSR--GRSHSRSRSRERRHRSRSRE 141

Query: 255 RKEGKEGRREKRK 267
           RK+ +   RE++K
Sbjct: 142 RKKSRSRSRERKK 154



 Score = 33.9 bits (76), Expect = 0.29
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 197 LHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERK 256
           L+S + GE      ER    G+     R +ER+  R   RE  K R R   RK      +
Sbjct: 102 LNSSENGEDRHKRKERKSSRGRSHSRSRSRERRH-RSRSRERKKSRSRSRERKKSRSRSR 160

Query: 257 EGKEGRREKRK 267
           E K+ R   R+
Sbjct: 161 ERKKSRSRSRE 171


>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 123

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 23/69 (33%), Positives = 38/69 (55%)

Query: 199 SEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEG 258
           +EK  EKEE   +R R+  K+  E  R+E +E  E  +E  +K      +K   + RKE 
Sbjct: 49  TEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEE 108

Query: 259 KEGRREKRK 267
           +E +++KR+
Sbjct: 109 EEEKKKKRR 117



 Score = 37.0 bits (84), Expect = 0.034
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 6/68 (8%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           EK  +K+    E+ +E  +E ++ +RK +K+  E  RE  ++   EE      KE +E +
Sbjct: 39  EKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEE------KEEEEKE 92

Query: 260 EGRREKRK 267
           EGRR K+K
Sbjct: 93  EGRRRKKK 100



 Score = 35.8 bits (81), Expect = 0.076
 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 5/73 (6%)

Query: 199 SEKGGEKEEGIGERGREGGKEGREGRRKERK----EGREGGREGGKKRGREEGRKGGVKE 254
           +E+  E+EE  G+R +E  KE R+ + K++K    E R+   E  KKR R+  +K   +E
Sbjct: 16  TEETEEEEEKEGKR-KEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEE 74

Query: 255 RKEGKEGRREKRK 267
           R+E +E   E+++
Sbjct: 75  REEEEEEEEEEKE 87



 Score = 35.0 bits (79), Expect = 0.13
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 5/68 (7%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           +K  E+ E   E   E  KEG+  R+++RKE R   +E  KK+  +E  K   KE +E K
Sbjct: 7   KKETEETEETEETEEEEEKEGK--RKEKRKEKR---KEKEKKKKTKETEKRKEKEEEEKK 61

Query: 260 EGRREKRK 267
             R+ K+K
Sbjct: 62  RKRKRKKK 69



 Score = 34.7 bits (78), Expect = 0.17
 Identities = 18/62 (29%), Positives = 36/62 (58%)

Query: 199 SEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEG 258
           +E+  E EE   E  +EG ++ +   +++ KE ++  +E  K++ +EE  K   ++RK+ 
Sbjct: 10  TEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKK 69

Query: 259 KE 260
           KE
Sbjct: 70  KE 71



 Score = 34.7 bits (78), Expect = 0.17
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 10/77 (12%)

Query: 201 KGGEKEEGIGERGREGGKEGREGRRK----------ERKEGREGGREGGKKRGREEGRKG 250
           K  EK++   E  +   KE  E +RK          ER+E  E   E  ++  +EEGR+ 
Sbjct: 38  KEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRR 97

Query: 251 GVKERKEGKEGRREKRK 267
             K+++  KE   EK+K
Sbjct: 98  KKKKKRRRKEEEEEKKK 114



 Score = 33.5 bits (75), Expect = 0.38
 Identities = 18/68 (26%), Positives = 39/68 (57%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           EK G+++E   E+ +E  K+ +    ++RKE  E  ++  +KR +++  +   +E +E +
Sbjct: 24  EKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEE 83

Query: 260 EGRREKRK 267
           E + E+ K
Sbjct: 84  EEKEEEEK 91



 Score = 32.3 bits (72), Expect = 0.84
 Identities = 17/50 (34%), Positives = 29/50 (58%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRK 249
           E+  E+EE   E+  E  +EGR  ++K+++  +E   E  KKR R+  +K
Sbjct: 74  EREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTKKK 123


>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens]
          Length = 1341

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 204  EKEEGIGERG--REGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEG 261
            E+E  + E+   RE   E RE  R ER+  R+  REG + R R   R+   KER + KE 
Sbjct: 1137 EQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRR--KERAKSKEK 1194

Query: 262  RREKRKLA 269
            + EK++ A
Sbjct: 1195 KSEKKEKA 1202



 Score = 34.3 bits (77), Expect = 0.22
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 6/74 (8%)

Query: 200  EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGG------VK 253
            EK  +++E   ++ RE   E    R+ ER++ RE  RE  ++R RE  R  G       +
Sbjct: 1249 EKRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERERERDRGDRDRDRER 1308

Query: 254  ERKEGKEGRREKRK 267
            +R+ G+E  R   K
Sbjct: 1309 DRERGRERDRRDTK 1322



 Score = 33.1 bits (74), Expect = 0.49
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)

Query: 194  YFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEG-REGGREGGKKRGREEGRKGGV 252
            + PL   +  +KE    ER +E  K  +E   +E+KE  +E  RE  ++  RE+ R+   
Sbjct: 1226 WLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREKEAERERNRQLEREKRREHS- 1284

Query: 253  KERKEGKEGRREK 265
            +ER   +E  RE+
Sbjct: 1285 RERDRERERERER 1297



 Score = 31.6 bits (70), Expect = 1.4
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 199  SEKGGEKEEGIGERGREGGKEGREG------RRKERKEGREGGREGGKKRGREEGRKGGV 252
            +E+  E+E+   E+  E  KE  +       R+ ER++ RE  RE  ++R RE  R  G 
Sbjct: 1242 AERAKEREKRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERERERDRGD 1301

Query: 253  KERKEGKEGRREKRK 267
            ++R   ++  R + +
Sbjct: 1302 RDRDRERDRERGRER 1316



 Score = 30.4 bits (67), Expect = 3.2
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 8/56 (14%)

Query: 200  EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKER 255
            E+  E+E   G+R R+        R ++R+ GRE  R   K+  R   R   V++R
Sbjct: 1290 ERERERERDRGDRDRD--------RERDRERGRERDRRDTKRHSRSRSRSTPVRDR 1337


>gi|4557509 cylicin 2 [Homo sapiens]
          Length = 348

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 197 LHSEKGGEKEEGIGERGREGGKEGRE---GRRKERKEGREGGREGGKKRGREEGRKGGVK 253
           L ++K  +K +   E+G++   E  +   G +K+ K+ ++   +G       EG KGG +
Sbjct: 155 LDAKKDSKKGKKDAEKGKDSATESEDEKGGAKKDNKKDKKDSNKGKDSATESEGEKGGTE 214

Query: 254 ERKEGKEGRREKRK 267
             K+ K+G+++ +K
Sbjct: 215 --KDSKKGKKDSKK 226



 Score = 35.8 bits (81), Expect = 0.076
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 201 KGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKE 260
           K G+K+   G +  E GKE +   +K+ K+G++   +G       E  KGG K  K+ K+
Sbjct: 135 KQGKKDSKKG-KDIEKGKEEKLDAKKDSKKGKKDAEKGKDSATESEDEKGGAK--KDNKK 191

Query: 261 GRREKRKLAIPSNFGKTEKG 280
            +++  K    +   + EKG
Sbjct: 192 DKKDSNKGKDSATESEGEKG 211



 Score = 33.1 bits (74), Expect = 0.49
 Identities = 18/70 (25%), Positives = 40/70 (57%), Gaps = 4/70 (5%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKER--KEGREGGREGGKKRGREEGRKGGVKERKE 257
           EKGG +++   ++G++  K+G++   + +  K   +   +G K   + +  K   K+ KE
Sbjct: 209 EKGGTEKDS--KKGKKDSKKGKDSAIELQAVKADEKKDEDGKKDANKGDESKDAKKDAKE 266

Query: 258 GKEGRREKRK 267
            K+G+++K+K
Sbjct: 267 IKKGKKDKKK 276



 Score = 31.2 bits (69), Expect = 1.9
 Identities = 18/85 (21%), Positives = 42/85 (49%), Gaps = 2/85 (2%)

Query: 196 PLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKER 255
           P  + +   K   IG++G +  K  ++       E ++G ++  K +  E+G++  +  +
Sbjct: 101 PTRTVEVDSKAAEIGKKGED--KTTQKDTTDSESELKQGKKDSKKGKDIEKGKEEKLDAK 158

Query: 256 KEGKEGRREKRKLAIPSNFGKTEKG 280
           K+ K+G+++  K    +   + EKG
Sbjct: 159 KDSKKGKKDAEKGKDSATESEDEKG 183


>gi|17136078 VGF nerve growth factor inducible precursor [Homo
           sapiens]
          Length = 615

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 6/80 (7%)

Query: 201 KGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKE 260
           +GG ++ G+G RG +   E RE  R+E +  +E  R GG++R  EE  +    E  E +E
Sbjct: 338 QGGARQRGLGGRGLQEAAEERESAREEEEAEQE--RRGGEERVGEEDEEAAEAE-AEAEE 394

Query: 261 GRREKRKLAIPSNFGKTEKG 280
             R ++   +   F + E G
Sbjct: 395 AERARQNALL---FAEEEDG 411


>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 819

 Score = 37.7 bits (86), Expect = 0.020
 Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 9/91 (9%)

Query: 196 PLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGR-------EGGREGGKKRGREEGR 248
           P    +GG   + +G +    G+ G++ RR+ +K  +        GG  GG+++    G 
Sbjct: 298 PAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGG--GGQQKAAVVGV 355

Query: 249 KGGVKERKEGKEGRREKRKLAIPSNFGKTEK 279
           K   K+R+ GK+ RR+K   A   + G  +K
Sbjct: 356 KSRKKQRRRGKKPRRQKASAAGAKSRGGGDK 386



 Score = 36.6 bits (83), Expect = 0.044
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 201 KGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGG--KKRGREEGRKGGVKERKEG 258
           + G+K    G + R  G E ++GR++E K  R G   GG  KK  R +   GG K R+ G
Sbjct: 185 RSGKKPRRRGAKSR--GDEDKKGRQREAKS-RFGKTRGGRRKKHRRPKPAAGGAKSRRGG 241

Query: 259 -KEGRREKRKLAIPSNFGKTEKGFS 282
            K+ ++++R+    +  GK+  G S
Sbjct: 242 GKKPQKQRRRGQKAATGGKSRVGKS 266



 Score = 34.7 bits (78), Expect = 0.17
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 202 GGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKG-GVKERKEGKE 260
           GG+K    G++G   GKE R+  +K    G    R GG+++    G K  G + RK  + 
Sbjct: 67  GGKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRR 126

Query: 261 GRR 263
           G++
Sbjct: 127 GQK 129



 Score = 32.0 bits (71), Expect = 1.1
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 6/70 (8%)

Query: 202 GGEKEEGIGERGREGGKEGREGRRKERKEGREGG---REGGKKRG-REEGRKGGVKERKE 257
           G +K   +G + R+  K+ R G++  R++    G   R GG K+G RE  R+G  +++  
Sbjct: 346 GQQKAAVVGVKSRK--KQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPR 403

Query: 258 GKEGRREKRK 267
            +  RR  +K
Sbjct: 404 WQNPRRRAQK 413



 Score = 32.0 bits (71), Expect = 1.1
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 20/96 (20%)

Query: 201 KGGEKEEGIGERGREGGKEGREG------RRKERKEGREGGREGGKKRGREEGRK----- 249
           +GG  ++G+ E  R G  +GR+       RR+ +K      R GG K+ R  G K     
Sbjct: 381 RGGGDKKGLREAKRRG--DGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRRGPKAAKSR 438

Query: 250 -------GGVKERKEGKEGRREKRKLAIPSNFGKTE 278
                  GG K R+ G++ R++  +    S   K +
Sbjct: 439 GGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQ 474



 Score = 31.2 bits (69), Expect = 1.9
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 208 GIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKG-GVKERKEGKEGRR 263
           G  +R R GG + R G +     G++    GGKK  R + R G G K    GK+  R
Sbjct: 762 GGAKRRRGGGAKSRSGEKAVTAGGQKAAAAGGKKPPRVKSRGGRGQKAAAGGKKPLR 818



 Score = 30.8 bits (68), Expect = 2.4
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 12/76 (15%)

Query: 199 SEKGG----EKEEGIGERGREGGKE--GRE---GRRKERKEGREGGREGGKKRGREEGRK 249
           S +GG    +K+   G++   GGK   G+    G +K R++G+     G K+RG      
Sbjct: 237 SRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRG---AAT 293

Query: 250 GGVKERKEGKEGRREK 265
            G K   +G+ GR  K
Sbjct: 294 AGEKPAAKGRGGRGPK 309



 Score = 29.6 bits (65), Expect = 5.4
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 5/65 (7%)

Query: 202 GGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEG 261
           GG+K    G++ R+   E     R ++K+GR+     G K      R GG+K        
Sbjct: 446 GGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKASAAGTK-----SRGGGLKSHSGKNLW 500

Query: 262 RREKR 266
           RR ++
Sbjct: 501 RRGQK 505



 Score = 29.6 bits (65), Expect = 5.4
 Identities = 20/68 (29%), Positives = 25/68 (36%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGK 259
           ++ G+K      RG  G K    G  K R  G    R G K    +    GG K R+ G 
Sbjct: 712 QRRGKKPRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGGG 771

Query: 260 EGRREKRK 267
              R   K
Sbjct: 772 AKSRSGEK 779



 Score = 28.9 bits (63), Expect = 9.2
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKG-----GVKE 254
           +K G + E     G+  G   ++ RR +   G    R GG K+ +++ R+G     G K 
Sbjct: 202 DKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAATGGKS 261

Query: 255 RKEGKEGRREKR 266
           R     G  +K+
Sbjct: 262 RVGKSRGGGDKK 273



 Score = 28.9 bits (63), Expect = 9.2
 Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 5/71 (7%)

Query: 205 KEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRRE 264
           K  G G +    G    + R K+ + G+  G  G K RG      GG K R  G    R 
Sbjct: 695 KSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRG-----SGGAKSRGSGGAKSRS 749

Query: 265 KRKLAIPSNFG 275
            +K A   + G
Sbjct: 750 GKKAAASKSHG 760


>gi|13129006 nucleolar protein GU2 [Homo sapiens]
          Length = 737

 Score = 37.7 bits (86), Expect = 0.020
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 200 EKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKR--GREEGRKGGVK 253
           ++ G      G  GR GG+ G    R+ R+  R G R+ G++R   R   R GG K
Sbjct: 678 QRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDGRRRSGNRNRSRSGGHK 733



 Score = 33.1 bits (74), Expect = 0.49
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)

Query: 212 RGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
           R R G   GR GR   R  GR GGR G + R   +G + G ++    + G R + +
Sbjct: 677 RQRSGWSSGRSGR-SGRSGGRSGGRSGRQSR---QGSRSGSRQDGRRRSGNRNRSR 728



 Score = 30.0 bits (66), Expect = 4.1
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)

Query: 193 EYFPLHSEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGV 252
           EY+  ++     +  G    GR G + GR G R   + GR+  R+G +   R++GR+   
Sbjct: 666 EYYDGNTSSNSRQRSGWSS-GRSG-RSGRSGGRSGGRSGRQ-SRQGSRSGSRQDGRRRSG 722

Query: 253 KERKEGKEGRR 263
              +    G +
Sbjct: 723 NRNRSRSGGHK 733


>gi|32484979 adaptor-related protein complex 3, beta 1 subunit [Homo
           sapiens]
          Length = 1094

 Score = 37.4 bits (85), Expect = 0.026
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)

Query: 199 SEKGGEKEEGIGERGREGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEG 258
           SE G E  E  GE G EG            ++  E GRE G +  R   R    K + + 
Sbjct: 694 SESGSESGEQ-GESGEEGDSNEDSSEDSSSEQDSESGRESGLENKRTAKRNSKAKGKSDS 752

Query: 259 KEGRREKRK 267
           ++G +E  K
Sbjct: 753 EDGEKENEK 761


>gi|239749652 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 60

 Score = 37.4 bits (85), Expect = 0.026
 Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 8/46 (17%)

Query: 215 EGGKEGREGRRKERKEGREGGREGGKKRGREEGRKGGVKERKEGKE 260
           EGGKE + GR++ERK+ +E      +K+ RE+G K   K+RK+ KE
Sbjct: 2   EGGKERKRGRKRERKKEKE------RKKEREKGNK--EKKRKKEKE 39



 Score = 32.3 bits (72), Expect = 0.84
 Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 2/35 (5%)

Query: 233 EGGREGGKKRGREEGRKGGVKERKEGKEGRREKRK 267
           EGG+E  +KRGR+  RK   + +KE ++G +EK++
Sbjct: 2   EGGKE--RKRGRKRERKKEKERKKEREKGNKEKKR 34


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.133    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,033,933
Number of Sequences: 37866
Number of extensions: 996440
Number of successful extensions: 7737
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 208
Number of HSP's that attempted gapping in prelim test: 5150
Number of HSP's gapped (non-prelim): 1738
length of query: 424
length of database: 18,247,518
effective HSP length: 105
effective length of query: 319
effective length of database: 14,271,588
effective search space: 4552636572
effective search space used: 4552636572
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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