Guide to the Human Genome
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Name: ELK4 Sequence: fasta or formatted (431aa) NCBI GI: 41872448
Description:

ELK4 protein isoform a

Referenced in:

Ets Family
Jun / Fos Complexes

Other entries for this name:
alt prot [405aa] ELK4 protein isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         21           2
 C cysteine            0.5          2           1
 D aspartate           4.2         18           1
 E glutamate           5.1         22           2
 F phenylalanine       3.7         16           2
 G glycine             3.9         17           2
 H histidine           1.2          5           1
 I isoleucine          5.3         23           2
 K lysine              7.4         32           2
 L leucine            10.9         47           2
 M methionine          1.6          7           1
 N asparagine          4.9         21           2
 P proline            12.1         52           2
 Q glutamine           3.9         17           1
 R arginine            2.1          9           1
 S serine             13.9         60           4
 T threonine           6.7         29           2
 V valine              4.9         21           1
 W tryptophan          0.9          4           1
 Y tyrosine            1.9          8           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ELK4 protein isoform a 
ELK4                  0.831   ELK4 protein isoform b 
ELK3                  0.392   ELK3 protein 
ELK1                  0.242   ELK1 protein 
ELK1                  0.242   ELK1 protein 
ETV4                  0.115   ets variant gene 4 (E1A enhancer binding protein, E...
ETV4                  0.115   ets variant gene 4 (E1A enhancer binding protein, E1...
ETV1                  0.111   ets variant gene 1 isoform f 
ETV1                  0.111   ets variant gene 1 isoform e 
ETV1                  0.111   ets variant gene 1 isoform d 
ETV1                  0.111   ets variant gene 1 isoform c 
ETV1                  0.111   ets variant gene 1 isoform c 
ETV1                  0.111   ets variant gene 1 isoform b 
ETV1                  0.111   ets variant gene 1 isoform a 
ETV5                  0.109   ets variant gene 5 (ets-related molecule) 
ERG                   0.099   ets-related isoform 4 
ERG                   0.099   ets-related isoform 2 
ERG                   0.099   ets-related isoform 1 
ERG                   0.099   ets-related isoform 3 
ELF1                  0.099   E74-like factor 1 (ets domain transcription factor) ...
ELF1                  0.099   E74-like factor 1 (ets domain transcription factor)...
FLI1                  0.099   Friend leukemia virus integration 1 
FEV                   0.097   FEV (ETS oncogene family) 
ERF                   0.096   Ets2 repressor factor 
LOC390937             0.096   PREDICTED: similar to hCG2040171 
LOC390937             0.096   PREDICTED: similar to hCG2040171 
LOC390937             0.096   PREDICTED: similar to hCG2040171 
GABPA                 0.095   GA binding protein transcription factor, alpha subun...
ETS2                  0.093   v-ets erythroblastosis virus E26 oncogene homolog 2 [...
ETS1                  0.092   v-ets erythroblastosis virus E26 oncogene homolog 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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