Guide to the Human Genome
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Name: ELK4 Sequence: fasta or formatted (405aa) NCBI GI: 11496882
Description:

ELK4 protein isoform b

Referenced in:

Ets Family
Jun / Fos Complexes

Other entries for this name:
alt prot [431aa] ELK4 protein isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         19           2
 C cysteine            1.5          6           1
 D aspartate           4.0         16           1
 E glutamate           5.7         23           2
 F phenylalanine       4.0         16           2
 G glycine             3.0         12           2
 H histidine           0.7          3           1
 I isoleucine          5.4         22           2
 K lysine              7.9         32           2
 L leucine            11.1         45           3
 M methionine          2.2          9           1
 N asparagine          4.9         20           2
 P proline            10.4         42           2
 Q glutamine           4.2         17           1
 R arginine            2.5         10           1
 S serine             12.8         52           4
 T threonine           5.9         24           2
 V valine              6.2         25           1
 W tryptophan          0.7          3           1
 Y tyrosine            2.2          9           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ELK4 protein isoform b 
ELK4                  0.890   ELK4 protein isoform a 
ELK3                  0.314   ELK3 protein 
ELK1                  0.192   ELK1 protein 
ELK1                  0.192   ELK1 protein 
ETV4                  0.123   ets variant gene 4 (E1A enhancer binding protein, E...
ETV4                  0.123   ets variant gene 4 (E1A enhancer binding protein, E1...
ETV1                  0.119   ets variant gene 1 isoform f 
ETV1                  0.119   ets variant gene 1 isoform e 
ETV1                  0.119   ets variant gene 1 isoform d 
ETV1                  0.119   ets variant gene 1 isoform c 
ETV1                  0.119   ets variant gene 1 isoform c 
ETV1                  0.119   ets variant gene 1 isoform b 
ETV1                  0.119   ets variant gene 1 isoform a 
ETV5                  0.117   ets variant gene 5 (ets-related molecule) 
ERG                   0.106   ets-related isoform 4 
ERG                   0.106   ets-related isoform 2 
ERG                   0.106   ets-related isoform 1 
ERG                   0.106   ets-related isoform 3 
FLI1                  0.106   Friend leukemia virus integration 1 
FEV                   0.104   FEV (ETS oncogene family) 
ELF1                  0.103   E74-like factor 1 (ets domain transcription factor) ...
ELF1                  0.103   E74-like factor 1 (ets domain transcription factor)...
ERF                   0.103   Ets2 repressor factor 
LOC390937             0.103   PREDICTED: similar to hCG2040171 
LOC390937             0.103   PREDICTED: similar to hCG2040171 
LOC390937             0.103   PREDICTED: similar to hCG2040171 
GABPA                 0.101   GA binding protein transcription factor, alpha subun...
ETS2                  0.100   v-ets erythroblastosis virus E26 oncogene homolog 2 [...
ETS1                  0.099   v-ets erythroblastosis virus E26 oncogene homolog 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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