Search of human proteins with 238624130

Search of human proteins with 238624130

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|238624130 large conductance calcium-activated potassium
channel subfamily M alpha member 1 isoform c [Homo sapiens]
         (1236 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|238624130 large conductance calcium-activated potassium chann...  2494   0.0  
gi|26638650 large conductance calcium-activated potassium channe...  2276   0.0  
gi|238624132 large conductance calcium-activated potassium chann...  2256   0.0  
gi|62388890 large conductance calcium-activated potassium channe...  2254   0.0  
gi|157074214 potassium channel, subfamily U, member 1 [Homo sapi...   878   0.0  
gi|41349443 potassium channel, subfamily T, member 2 [Homo sapiens]   124   4e-28
gi|240255505 potassium channel, subfamily T, member 1 [Homo sapi...   118   4e-26
gi|27436974 potassium voltage-gated channel, Shab-related subfam...    65   5e-10
gi|20070166 potassium voltage-gated channel, subfamily F, member...    65   5e-10
gi|4826784 potassium voltage-gated channel, Shab-related subfami...    63   2e-09
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]               62   4e-09
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]               62   4e-09
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]               62   4e-09
gi|88758576 Shaw-related voltage-gated potassium channel protein...    59   2e-08
gi|24497462 Shaw-related voltage-gated potassium channel protein...    59   2e-08
gi|24497464 Shaw-related voltage-gated potassium channel protein...    59   2e-08
gi|27436996 potassium voltage-gated channel, subfamily G, member...    59   4e-08
gi|27436984 potassium voltage-gated channel, Shal-related subfam...    58   6e-08
gi|27436986 potassium voltage-gated channel, Shal-related subfam...    58   6e-08
gi|9789987 potassium voltage-gated channel, Shal-related subfami...    56   2e-07
gi|21217561 Shaw-related voltage-gated potassium channel protein...    56   2e-07
gi|21217563 Shaw-related voltage-gated potassium channel protein...    56   2e-07
gi|24497458 Shaw-related voltage-gated potassium channel protein...    56   2e-07
gi|27436988 potassium voltage-gated channel, subfamily G, member...    55   3e-07
gi|24497460 Shaw-related voltage-gated potassium channel protein...    55   5e-07
gi|4826786 Shaw-related voltage-gated potassium channel protein ...    54   1e-06
gi|163792201 Shaw-related voltage-gated potassium channel protei...    54   1e-06
gi|7657289 potassium channel, subfamily V, member 1 [Homo sapiens]     54   1e-06
gi|27436981 potassium voltage-gated channel, Shal-related subfam...    53   2e-06
gi|45383011 potassium voltage-gated channel, delayed-rectifier, ...    52   4e-06

>gi|238624130 large conductance calcium-activated potassium channel
            subfamily M alpha member 1 isoform c [Homo sapiens]
          Length = 1236

 Score = 2494 bits (6464), Expect = 0.0
 Identities = 1236/1236 (100%), Positives = 1236/1236 (100%)

Query: 1    MANGGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSSSSSS 60
            MANGGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSSSSSS
Sbjct: 1    MANGGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSSSSSS 60

Query: 61   VHEPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH 120
            VHEPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH
Sbjct: 61   VHEPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH 120

Query: 121  CGGKTKEAQKINNGSSQADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVL 180
            CGGKTKEAQKINNGSSQADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVL
Sbjct: 121  CGGKTKEAQKINNGSSQADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVL 180

Query: 181  VVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKL 240
            VVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKL
Sbjct: 181  VVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKL 240

Query: 241  WFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKL 300
            WFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKL
Sbjct: 241  WFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKL 300

Query: 301  VNLLSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYA 360
            VNLLSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYA
Sbjct: 301  VNLLSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYA 360

Query: 361  KTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLES 420
            KTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLES
Sbjct: 361  KTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLES 420

Query: 421  VSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVK 480
            VSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVK
Sbjct: 421  VSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVK 480

Query: 481  IESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSW 540
            IESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSW
Sbjct: 481  IESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSW 540

Query: 541  NWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNE 600
            NWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNE
Sbjct: 541  NWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNE 600

Query: 601  MYTEYLSSAFVGLSFPTVCELCFVKLKLLMIAIEYKSANRESRILINPGNHLKIQEGTLG 660
            MYTEYLSSAFVGLSFPTVCELCFVKLKLLMIAIEYKSANRESRILINPGNHLKIQEGTLG
Sbjct: 601  MYTEYLSSAFVGLSFPTVCELCFVKLKLLMIAIEYKSANRESRILINPGNHLKIQEGTLG 660

Query: 661  FFIASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKRPKMSIYKRMRRACCFDCGRSERD 720
            FFIASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKRPKMSIYKRMRRACCFDCGRSERD
Sbjct: 661  FFIASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKRPKMSIYKRMRRACCFDCGRSERD 720

Query: 721  CSCMSGRVRGNVDTLERAFPLSSVSVNDCSTSFRAFEDEQPSTLSPKKKQRNGGMRNSPN 780
            CSCMSGRVRGNVDTLERAFPLSSVSVNDCSTSFRAFEDEQPSTLSPKKKQRNGGMRNSPN
Sbjct: 721  CSCMSGRVRGNVDTLERAFPLSSVSVNDCSTSFRAFEDEQPSTLSPKKKQRNGGMRNSPN 780

Query: 781  TSPKLMRHDPLLIPGNDQIDNMDSNVKKYDSTGMFHWCAPKEIEKVILTRSEAAMTVLSG 840
            TSPKLMRHDPLLIPGNDQIDNMDSNVKKYDSTGMFHWCAPKEIEKVILTRSEAAMTVLSG
Sbjct: 781  TSPKLMRHDPLLIPGNDQIDNMDSNVKKYDSTGMFHWCAPKEIEKVILTRSEAAMTVLSG 840

Query: 841  HVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWETLHNFPKVS 900
            HVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWETLHNFPKVS
Sbjct: 841  HVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWETLHNFPKVS 900

Query: 901  ILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQFDDSIG 960
            ILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQFDDSIG
Sbjct: 901  ILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQFDDSIG 960

Query: 961  VLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIPIITELVNDTNVQFLDQDDDD 1020
            VLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIPIITELVNDTNVQFLDQDDDD
Sbjct: 961  VLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIPIITELVNDTNVQFLDQDDDD 1020

Query: 1021 DPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALIAEEN 1080
            DPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALIAEEN
Sbjct: 1021 DPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALIAEEN 1080

Query: 1081 ALRGGYSTPQTLANRDRCRVAQLALLDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRL 1140
            ALRGGYSTPQTLANRDRCRVAQLALLDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRL
Sbjct: 1081 ALRGGYSTPQTLANRDRCRVAQLALLDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRL 1140

Query: 1141 RDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSQSSS 1200
            RDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSQSSS
Sbjct: 1141 RDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSQSSS 1200

Query: 1201 KKSSSVHSIPSTANRQNRPKSRESRDKQKYVQEERL 1236
            KKSSSVHSIPSTANRQNRPKSRESRDKQKYVQEERL
Sbjct: 1201 KKSSSVHSIPSTANRQNRPKSRESRDKQKYVQEERL 1236


>gi|26638650 large conductance calcium-activated potassium channel
            subfamily M alpha member 1 isoform b [Homo sapiens]
          Length = 1178

 Score = 2276 bits (5897), Expect = 0.0
 Identities = 1155/1241 (93%), Positives = 1162/1241 (93%), Gaps = 68/1241 (5%)

Query: 1    MANGGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSSSSSS 60
            MANGGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSSSSSS
Sbjct: 1    MANGGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSSSSSS 60

Query: 61   VHEPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH 120
            VHEPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH
Sbjct: 61   VHEPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH 120

Query: 121  CGGKTKEAQKINNGSSQADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVL 180
            CGGKTKEAQKINNGSSQADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVL
Sbjct: 121  CGGKTKEAQKINNGSSQADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVL 180

Query: 181  VVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKL 240
            VVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKL
Sbjct: 181  VVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKL 240

Query: 241  WFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKL 300
            WFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKL
Sbjct: 241  WFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKL 300

Query: 301  VNLLSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYA 360
            VNLLSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYA
Sbjct: 301  VNLLSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYA 360

Query: 361  KTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLES 420
            KTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLES
Sbjct: 361  KTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLES 420

Query: 421  VSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVK 480
            VSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVK
Sbjct: 421  VSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVK 480

Query: 481  IESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSW 540
            IESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSW
Sbjct: 481  IESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSW 540

Query: 541  NWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNE 600
            NWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNE
Sbjct: 541  NWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNE 600

Query: 601  MYTEYLSSAFVGLSFPTVCELCFVKLKLLMIAIEYKSANRESRILINPGNHLKIQEGTLG 660
            MYTEYLSSAFVGLSFPTVCELCFVKLKLLMIAIEYKSANRESRILINPGNHLKIQEGTLG
Sbjct: 601  MYTEYLSSAFVGLSFPTVCELCFVKLKLLMIAIEYKSANRESRILINPGNHLKIQEGTLG 660

Query: 661  FFIASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKR-----PKMSIYKRMRRACCFDCG 715
            FFIASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKR     P     K+ +R       
Sbjct: 661  FFIASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKRLEDEQPSTLSPKKKQR------- 713

Query: 716  RSERDCSCMSGRVRGNVDTLERAFPLSSVSVNDCSTSFRAFEDEQPSTLSPKKKQRNGGM 775
                     +G +R + +T                              SPK       M
Sbjct: 714  ---------NGGMRNSPNT------------------------------SPKL------M 728

Query: 776  RNSPNTSPKLMRHDPLLIPGNDQIDNMDSNVKKYDSTGMFHWCAPKEIEKVILTRSEAAM 835
            R+ P           LLIPGNDQIDNMDSNVKKYDSTGMFHWCAPKEIEKVILTRSEAAM
Sbjct: 729  RHDP-----------LLIPGNDQIDNMDSNVKKYDSTGMFHWCAPKEIEKVILTRSEAAM 777

Query: 836  TVLSGHVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWETLHN 895
            TVLSGHVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWETLHN
Sbjct: 778  TVLSGHVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWETLHN 837

Query: 896  FPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQF 955
            FPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQF
Sbjct: 838  FPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQF 897

Query: 956  DDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIPIITELVNDTNVQFLD 1015
            DDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIPIITELVNDTNVQFLD
Sbjct: 898  DDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIPIITELVNDTNVQFLD 957

Query: 1016 QDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEAL 1075
            QDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEAL
Sbjct: 958  QDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEAL 1017

Query: 1076 IAEENALRGGYSTPQTLANRDRCRVAQLALLDGPFADLGDGGCYGDLFCKALKTYNMLCF 1135
            IAEENALRGGYSTPQTLANRDRCRVAQLALLDGPFADLGDGGCYGDLFCKALKTYNMLCF
Sbjct: 1018 IAEENALRGGYSTPQTLANRDRCRVAQLALLDGPFADLGDGGCYGDLFCKALKTYNMLCF 1077

Query: 1136 GIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHS 1195
            GIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHS
Sbjct: 1078 GIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHS 1137

Query: 1196 SQSSSKKSSSVHSIPSTANRQNRPKSRESRDKQKYVQEERL 1236
            SQSSSKKSSSVHSIPSTANRQNRPKSRESRDKQKYVQEERL
Sbjct: 1138 SQSSSKKSSSVHSIPSTANRQNRPKSRESRDKQKYVQEERL 1178


>gi|238624132 large conductance calcium-activated potassium channel
            subfamily M alpha member 1 isoform d [Homo sapiens]
          Length = 1219

 Score = 2256 bits (5845), Expect = 0.0
 Identities = 1155/1282 (90%), Positives = 1162/1282 (90%), Gaps = 109/1282 (8%)

Query: 1    MANGGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSSSSSS 60
            MANGGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSSSSSS
Sbjct: 1    MANGGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSSSSSS 60

Query: 61   VHEPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH 120
            VHEPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH
Sbjct: 61   VHEPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH 120

Query: 121  CGGKTKEAQKINNGSSQADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVL 180
            CGGKTKEAQKINNGSSQADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVL
Sbjct: 121  CGGKTKEAQKINNGSSQADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVL 180

Query: 181  VVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKL 240
            VVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKL
Sbjct: 181  VVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKL 240

Query: 241  WFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKL 300
            WFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKL
Sbjct: 241  WFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKL 300

Query: 301  VNLLSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYA 360
            VNLLSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYA
Sbjct: 301  VNLLSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYA 360

Query: 361  KTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLES 420
            KTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLES
Sbjct: 361  KTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLES 420

Query: 421  VSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVK 480
            VSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVK
Sbjct: 421  VSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVK 480

Query: 481  IESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSW 540
            IESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSW
Sbjct: 481  IESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSW 540

Query: 541  NWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNE 600
            NWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNE
Sbjct: 541  NWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNE 600

Query: 601  MYTEYLSSAFVGLSFPTVCELCFVKLKLLMIAIEYKSANRESRILINPGNHLKIQEGTLG 660
            MYTEYLSSAFVGLSFPTVCELCFVKLKLLMIAIEYKSANRESRILINPGNHLKIQEGTLG
Sbjct: 601  MYTEYLSSAFVGLSFPTVCELCFVKLKLLMIAIEYKSANRESRILINPGNHLKIQEGTLG 660

Query: 661  FFIASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKR-----PKMSIYKRMRRACCFDCG 715
            FFIASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKR     P     K+ +R       
Sbjct: 661  FFIASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKRLEDEQPSTLSPKKKQR------- 713

Query: 716  RSERDCSCMSGRVRGNVDTLERAFPLSSVSVNDCSTSFRAFEDEQPSTLSPKKKQRNGGM 775
                     +G +R + +T                              SPK       M
Sbjct: 714  ---------NGGMRNSPNT------------------------------SPKL------M 728

Query: 776  RNSPNTSPKLMRHDPLLIPGNDQIDNMDSNVKKYDSTGMFHWCAPKEIEKVIL------- 828
            R+ P           LLIPGNDQIDNMDSNVKKYDSTGMFHWCAPKEIEKVIL       
Sbjct: 729  RHDP-----------LLIPGNDQIDNMDSNVKKYDSTGMFHWCAPKEIEKVILVTGWMPY 777

Query: 829  ----------------------------------TRSEAAMTVLSGHVVVCIFGDVSSAL 854
                                              TRSEAAMTVLSGHVVVCIFGDVSSAL
Sbjct: 778  LGPRVLMTCLDIGVVCMPTDIQSTSPASIKKFKETRSEAAMTVLSGHVVVCIFGDVSSAL 837

Query: 855  IGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWETLHNFPKVSILPGTPLSRADLRA 914
            IGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWETLHNFPKVSILPGTPLSRADLRA
Sbjct: 838  IGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWETLHNFPKVSILPGTPLSRADLRA 897

Query: 915  VNINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGM 974
            VNINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGM
Sbjct: 898  VNINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGM 957

Query: 975  DRSSPDNSPVHGMLRQPSITTGVNIPIITELVNDTNVQFLDQDDDDDPDTELYLTQPFAC 1034
            DRSSPDNSPVHGMLRQPSITTGVNIPIITELVNDTNVQFLDQDDDDDPDTELYLTQPFAC
Sbjct: 958  DRSSPDNSPVHGMLRQPSITTGVNIPIITELVNDTNVQFLDQDDDDDPDTELYLTQPFAC 1017

Query: 1035 GTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALIAEENALRGGYSTPQTLAN 1094
            GTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALIAEENALRGGYSTPQTLAN
Sbjct: 1018 GTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALIAEENALRGGYSTPQTLAN 1077

Query: 1095 RDRCRVAQLALLDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSTPSQCTKR 1154
            RDRCRVAQLALLDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSTPSQCTKR
Sbjct: 1078 RDRCRVAQLALLDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSTPSQCTKR 1137

Query: 1155 YVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSQSSSKKSSSVHSIPSTAN 1214
            YVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSQSSSKKSSSVHSIPSTAN
Sbjct: 1138 YVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSQSSSKKSSSVHSIPSTAN 1197

Query: 1215 RQNRPKSRESRDKQKYVQEERL 1236
            RQNRPKSRESRDKQKYVQEERL
Sbjct: 1198 RQNRPKSRESRDKQKYVQEERL 1219


>gi|62388890 large conductance calcium-activated potassium channel
            subfamily M alpha member 1 isoform a [Homo sapiens]
          Length = 1182

 Score = 2254 bits (5842), Expect = 0.0
 Identities = 1147/1237 (92%), Positives = 1154/1237 (93%), Gaps = 72/1237 (5%)

Query: 1    MANGGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSSSSSS 60
            MANGGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSSSSSS
Sbjct: 1    MANGGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSSSSSS 60

Query: 61   VHEPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH 120
            VHEPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH
Sbjct: 61   VHEPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCH 120

Query: 121  CGGKTKEAQKINNGSSQADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVL 180
            CGGKTKEAQKINNGSSQADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVL
Sbjct: 121  CGGKTKEAQKINNGSSQADGTLKPVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVL 180

Query: 181  VVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKL 240
            VVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKL
Sbjct: 181  VVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKL 240

Query: 241  WFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKL 300
            WFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKL
Sbjct: 241  WFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKL 300

Query: 301  VNLLSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYA 360
            VNLLSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYA
Sbjct: 301  VNLLSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYA 360

Query: 361  KTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLES 420
            KTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLES
Sbjct: 361  KTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLES 420

Query: 421  VSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVK 480
            VSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVK
Sbjct: 421  VSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVK 480

Query: 481  IESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSW 540
            IESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSW
Sbjct: 481  IESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSW 540

Query: 541  NWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNE 600
            NWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNE
Sbjct: 541  NWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNE 600

Query: 601  MYTEYLSSAFVGLSFPTVCELCFVKLKLLMIAIEYKSANRES----RILINPGNHLKIQE 656
            MYTEYLSSAFVGLSFPTVCELCFVKLKLLMIAIEYKSANRES    RILINPGNHLKIQE
Sbjct: 601  MYTEYLSSAFVGLSFPTVCELCFVKLKLLMIAIEYKSANRESRSRKRILINPGNHLKIQE 660

Query: 657  GTLGFFIASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKR-----PKMSIYKRMRRACC 711
            GTLGFFIASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKR     P     K+ +R   
Sbjct: 661  GTLGFFIASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKRLEDEQPSTLSPKKKQR--- 717

Query: 712  FDCGRSERDCSCMSGRVRGNVDTLERAFPLSSVSVNDCSTSFRAFEDEQPSTLSPKKKQR 771
                         +G +R + +T                              SPK    
Sbjct: 718  -------------NGGMRNSPNT------------------------------SPKL--- 731

Query: 772  NGGMRNSPNTSPKLMRHDPLLIPGNDQIDNMDSNVKKYDSTGMFHWCAPKEIEKVILTRS 831
               MR+ P           LLIPGNDQIDNMDSNVKKYDSTGMFHWCAPKEIEKVILTRS
Sbjct: 732  ---MRHDP-----------LLIPGNDQIDNMDSNVKKYDSTGMFHWCAPKEIEKVILTRS 777

Query: 832  EAAMTVLSGHVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWE 891
            EAAMTVLSGHVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWE
Sbjct: 778  EAAMTVLSGHVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWE 837

Query: 892  TLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDTSLQDKECILASLNIK 951
            TLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDTSLQDKECILASLNIK
Sbjct: 838  TLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDTSLQDKECILASLNIK 897

Query: 952  SMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIPIITELVNDTNV 1011
            SMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIPIITELVNDTNV
Sbjct: 898  SMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIPIITELVNDTNV 957

Query: 1012 QFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPE 1071
            QFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPE
Sbjct: 958  QFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPE 1017

Query: 1072 LEALIAEENALRGGYSTPQTLANRDRCRVAQLALLDGPFADLGDGGCYGDLFCKALKTYN 1131
            LEALIAEENALRGGYSTPQTLANRDRCRVAQLALLDGPFADLGDGGCYGDLFCKALKTYN
Sbjct: 1018 LEALIAEENALRGGYSTPQTLANRDRCRVAQLALLDGPFADLGDGGCYGDLFCKALKTYN 1077

Query: 1132 MLCFGIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSH 1191
            MLCFGIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSH
Sbjct: 1078 MLCFGIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSH 1137

Query: 1192 SSHSSQSSSKKSSSVHSIPSTANRQNRPKSRESRDKQ 1228
            SSHSSQSSSKKSSSVHSIPSTANRQNRPKSRESRDKQ
Sbjct: 1138 SSHSSQSSSKKSSSVHSIPSTANRQNRPKSRESRDKQ 1174


>gi|157074214 potassium channel, subfamily U, member 1 [Homo sapiens]
          Length = 1149

 Score =  878 bits (2269), Expect = 0.0
 Identities = 477/1132 (42%), Positives = 680/1132 (60%), Gaps = 99/1132 (8%)

Query: 89   AFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGGKTKEAQKINNGSSQ-----ADGTLK 143
            AF+ SS VTFF GL I+L++R +   W        ++ +  +I  G+         GT+ 
Sbjct: 26   AFILSSFVTFFSGLIILLIFRLI---W--------RSVKKWQIIKGTGIILELFTSGTIA 74

Query: 144  PVDEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSNPI 203
                   +    + +    +D   +++SAQT  G+VLV+LVF LSIG+L+IYFI+S++P+
Sbjct: 75   ------RSHVRSLHFQGQFRDHIEMLLSAQTFVGQVLVILVFVLSIGSLIIYFINSADPV 128

Query: 204  ESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVY 263
             SC + Y+D T+ ID+ FN FF  YFGLRF+AA+DK+ FWLE+NS+VD FT+PP F+S Y
Sbjct: 129  GSCSS-YEDKTIPIDLVFNAFFSFYFGLRFMAADDKIKFWLEMNSIVDIFTIPPTFISYY 187

Query: 264  LNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLLSIFISTWLTAAGFIHLVEN 323
            L  +WLGLRFLRALRL++  +ILQ L  +KTSNS+K   LLSI +STW TAAGFIHLVEN
Sbjct: 188  LKSNWLGLRFLRALRLLELPQILQILRAIKTSNSVKFSKLLSIILSTWFTAAGFIHLVEN 247

Query: 324  SGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASY 383
            SGDPW   +N+Q ++Y+E +YL+M T STVG+GDV AKT+LGR F++FF LG L +FA+Y
Sbjct: 248  SGDPWLKGRNSQNISYFESIYLVMATTSTVGFGDVVAKTSLGRTFIMFFTLGSLILFANY 307

Query: 384  VPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFL 443
            +PE++EL  N++KY  SY A+ G+K IVVCG+IT++SV+ FL++FL     ++N EIVFL
Sbjct: 308  IPEMVELFANKRKYTSSYEALKGKKFIVVCGNITVDSVTAFLRNFLRDKSGEINTEIVFL 367

Query: 444  HNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDA 503
                P+LELE +FK +     F  GS +   DL RV +ESA+ACLI+AN  C+D  AED 
Sbjct: 368  GETPPSLELETIFKCYLAYTTFISGSAMKWEDLRRVAVESAEACLIIANPLCSDSHAEDI 427

Query: 504  SNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSC 563
            SNIMRV+SIKNY    RII Q+LQ HNK +L  IPSWNW  GD+ IC AELKLGFIAQ C
Sbjct: 428  SNIMRVLSIKNYDSTTRIIIQILQSHNKVYLPKIPSWNWDTGDNIICFAELKLGFIAQGC 487

Query: 564  LAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNEMYTEYLSSAFVGLSFPTVCELCF 623
            L  GL T L +LF  ++   + + TW+K++L  + N++ T+ LS  F G+SFP V  LCF
Sbjct: 488  LVPGLCTFLTSLFVEQNKKVMPKQTWKKHFLNSMKNKILTQRLSDDFAGMSFPEVARLCF 547

Query: 624  VKLKLLMIAIEYKSANRES--RILINPGNHLKIQEGTLGFFIASDAKEVKRAFFYCKACH 681
            +K+ LL+IAIEYKS   +    +++NP   ++I++ TLGFFIA   K+V+RA FYC  CH
Sbjct: 548  LKMHLLLIAIEYKSLFTDGFCGLILNPPPQVRIRKNTLGFFIAETPKDVRRALFYCSVCH 607

Query: 682  DDITDPKRIKKCGCKRPKMSIYKRMRRACCFDCGRSERDC-SCMSGRVRGNVDTLERAFP 740
            DD+  P+ I  CGCK        R R+       +  + C   +S R+ G       +  
Sbjct: 608  DDVFIPELITNCGCK-------SRSRQHITVPSVKRMKKCLKGISSRISGQDSPPRVSAS 660

Query: 741  LSSVSVNDCSTSFRAFEDEQPSTLSPKKKQRNGGMRNSPNTSPKLMRHDPLLIPGNDQID 800
             SS+S                                  N + + ++HD           
Sbjct: 661  TSSIS----------------------------------NFTTRTLQHD----------- 675

Query: 801  NMDSNVKKYDSTGMFHWCAPKEIEKVILTRSEAAMTVLSGHVVVCIFGDVSSALIGLRNL 860
             ++ +  + DS+GMFHWC P  ++KV L R+  +      H+V C+FGD  SA +GLRN 
Sbjct: 676  -VEQDSDQLDSSGMFHWCKPTSLDKVTLKRTGKSKYKFRNHIVACVFGDAHSAPMGLRNF 734

Query: 861  VMPLRASNFHYHELKHIVFVGSIEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLC 920
            VMPLRASN+   ELK IVF+GS++YL+REW  L NFP++ ILPG  L   DL A NI  C
Sbjct: 735  VMPLRASNYTRKELKDIVFIGSLDYLQREWRFLWNFPQIYILPGCALYSGDLHAANIEQC 794

Query: 921  DMCVILSANQNNIDDTSLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPD 980
             MC +LS       + +L D E I+A+L I S+Q D S     + S+    PG      +
Sbjct: 795  SMCAVLSPPPQPSSNQTLVDTEAIMATLTIGSLQIDSSSDPSPSVSE--ETPGYTNGHNE 852

Query: 981  NSPVHGMLRQPSITTGVNIPIITELVNDTNVQFLDQ---DDDDDPDTELYLTQPFACGTA 1037
             S                +PI+TEL N +N+ F++Q    +    +T L+L+  F+ GT 
Sbjct: 853  KSNCR------------KVPILTELKNPSNIHFIEQLGGLEGSLQETNLHLSTAFSTGTV 900

Query: 1038 FAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALIAEENALRGGYSTPQTLANRDR 1097
            F+ S LDSL++  ++N ++L L++ LVTGG + +LE  + ++       S    L+ R+R
Sbjct: 901  FSGSFLDSLLATAFYNYHVLELLQMLVTGGVSSQLEQHLDKDKVYGVADSCTSLLSGRNR 960

Query: 1098 CRVAQLALLDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSTPSQCTKRYVI 1157
            C++  L+L +   +D+     +G LFC +L  + +LC G+YR+ D     P    KR+VI
Sbjct: 961  CKLGLLSLHETILSDVNPRNTFGQLFCGSLDLFGILCVGLYRIIDEEELNPE--NKRFVI 1018

Query: 1158 TNPPYEFELVPTDLIFCLMQFDHNAGQSRASLS-HSSHSSQSSSKKSSSVHS 1208
            T P  EF+L+P+DL+FC + F     +     S   S+   + + +++  HS
Sbjct: 1019 TRPANEFKLLPSDLVFCAIPFSTACYKRNEEFSLQKSYEIVNKASQTTETHS 1070


>gi|41349443 potassium channel, subfamily T, member 2 [Homo sapiens]
          Length = 1135

 Score =  124 bits (312), Expect = 4e-28
 Identities = 128/489 (26%), Positives = 210/489 (42%), Gaps = 61/489 (12%)

Query: 215 LQIDMAFNVFFLLYFGLRFIAANDKLW-------FWLEVNSVVDFF------TVPPVFVS 261
           LQ+ +A    F     L +++    +W       F LE+ + V F       ++  +FV 
Sbjct: 107 LQVSVALISLFETIL-LGYLSYKGNIWEQILRIPFILEIINAVPFIISIFWPSLRNLFVP 165

Query: 262 VYLNRSWLGLRFLRAL-----RLIQFSEILQFLNILKTSNSIKLVNLLSIFISTWLTAAG 316
           V+LN  WL    L  +     R IQ ++   F  +L       L++ L   I T +   G
Sbjct: 166 VFLN-CWLAKHALENMINDLHRAIQRTQSAMFNQVLI------LISTLLCLIFTCI--CG 216

Query: 317 FIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGG 376
             HL E  G         + L  ++ +Y  +VT STVG+GDV  +T   +LF+V  I   
Sbjct: 217 IQHL-ERIG---------KKLNLFDSLYFCIVTFSTVGFGDVTPETWSSKLFVVAMICVA 266

Query: 377 LAMFASYVPEIIELIGNRKKYGGSYSA--VSGRKHIVVC-GHITLESVSNFLKDFL-HKD 432
           L +      ++  L   R+K GG+YS       KH+V+C   + ++ + +FL +F  H  
Sbjct: 267 LVVLPIQFEQLAYLWMERQKSGGNYSRHRAQTEKHVVLCVSSLKIDLLMDFLNEFYAHPR 326

Query: 433 RDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILAN 492
             D  V I+    +   +           +V + QGS L   DL R K++ A+AC IL++
Sbjct: 327 LQDYYVVILCPTEMDVQVRRVLQIPMWSQRVIYLQGSALKDQDLLRAKMDDAEACFILSS 386

Query: 493 KYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLA 552
           +   D  + D   I+R  ++K++ P   +  Q+L+  NK H+        K  D  +C  
Sbjct: 387 RCEVDRTSSDHQTILRAWAVKDFAPNCPLYVQILKPENKFHI--------KFADHVVCEE 438

Query: 553 ELKLGFIAQSCLAQGLSTMLANLF--SMRSFIKIEEDTWQKYYLEGVSNEMYTEYLSSA- 609
           E K   +A +C+    ST++  L   S     +   + WQK Y     NE+Y   L  + 
Sbjct: 439 EFKYAMLALNCICPATSTLITLLVHTSRGQEGQQSPEQWQKMYGRCSGNEVYHIVLEEST 498

Query: 610 ----FVGLSFPTVCELCFVKLKLLMIAIEYKSANRESRILINPGNHLKIQEGTLGFFIAS 665
               + G SF         K  + +I +  +       IL+NPG    +    + F+I +
Sbjct: 499 FFAEYEGKSFTYASFHAHKKFGVCLIGVRRED---NKNILLNPGPRYIMNSTDICFYI-N 554

Query: 666 DAKEVKRAF 674
             KE   AF
Sbjct: 555 ITKEENSAF 563



 Score = 37.0 bits (84), Expect = 0.12
 Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 16/89 (17%)

Query: 998  NIPIITELVNDTNVQFLD----------------QDDDDDPDTELYLTQPFACGTAFAVS 1041
            ++ IITEL +  N++F+                 ++ +   +       PFA G  F++S
Sbjct: 832  SLSIITELTHPANMRFMQFRAKDCYSLALSKLEKKERERGSNLAFMFRLPFAAGRVFSIS 891

Query: 1042 VLDSLMSATYFNDNILTLIRTLVTGGATP 1070
            +LD+L+  ++  D ++++ R L+    TP
Sbjct: 892  MLDTLLYQSFVKDYMISITRLLLGLDTTP 920


>gi|240255505 potassium channel, subfamily T, member 1 [Homo
           sapiens]
          Length = 1235

 Score =  118 bits (295), Expect = 4e-26
 Identities = 126/489 (25%), Positives = 210/489 (42%), Gaps = 53/489 (10%)

Query: 213 FTLQIDMAFNVFFLLYFGLRFIAANDKLW-------FWLEVNSVVDFFTV---PPV---F 259
           + +Q+ +A  + FL    L +++    +W       F LE+ + + F      PP+   F
Sbjct: 177 WAIQVIVAI-ISFLETMLLIYLSYKGNIWEQIFRVSFVLEMINTLPFIITIFWPPLRNLF 235

Query: 260 VSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLLSIFISTWLTAAGFIH 319
           + V+LN  WL    L  +       IL+  + +     I    LL +  +      G  H
Sbjct: 236 IPVFLN-CWLAKHALENMINDFHRAILRTQSAMFNQVLILFCTLLCLVFTG---TCGIQH 291

Query: 320 LVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAM 379
           L E +G+      N   LT +   Y  +VT STVGYGDV  K    +L +V  I   L +
Sbjct: 292 L-ERAGE------NLSLLTSF---YFCIVTFSTVGYGDVTPKIWPSQLLVVIMICVALVV 341

Query: 380 FASYVPEIIELIGNRKKYGGSYSA--VSGRKHIVVC-GHITLESVSNFLKDFL-HKDRDD 435
                 E++ L   R+K GG+YS       KH+V+C   + ++ + +FL +F  H    D
Sbjct: 342 LPLQFEELVYLWMERQKSGGNYSRHRAQTEKHVVLCVSSLKIDLLMDFLNEFYAHPRLQD 401

Query: 436 VNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYC 495
             V I+    +   +           +V + QGS L   DL R K+++ +AC IL+++  
Sbjct: 402 YYVVILCPTEMDVQVRRVLQIPLWSQRVIYLQGSALKDQDLMRAKMDNGEACFILSSRNE 461

Query: 496 ADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELK 555
            D  A D   I+R  ++K++ P   +  Q+L+  NK H+        K  D  +C  E K
Sbjct: 462 VDRTAADHQTILRAWAVKDFAPNCPLYVQILKPENKFHV--------KFADHVVCEEECK 513

Query: 556 LGFIAQSCLAQGLSTMLANLFSMRSFIKIEE--DTWQKYYLEGVSNEMYTEYLSSA---- 609
              +A +C+    ST++  L       + +E  + WQ+ Y     NE+Y   +  +    
Sbjct: 514 YAMLALNCICPATSTLITLLVHTSRGQEGQESPEQWQRMYGRCSGNEVYHIRMGDSKFFR 573

Query: 610 -FVGLSFPTVCELCFVKLKLLMIAIEYKSANRESRILINPG-NHLKIQEGTLGFFIASDA 667
            + G SF         K  + +I ++ +       IL+NPG  H+     T   F  +  
Sbjct: 574 EYEGKSFTYAAFHAHKKYGVCLIGLKRED---NKSILLNPGPRHILAASDTC--FYINIT 628

Query: 668 KEVKRAFFY 676
           KE   AF +
Sbjct: 629 KEENSAFIF 637



 Score = 38.5 bits (88), Expect = 0.040
 Identities = 47/217 (21%), Positives = 89/217 (41%), Gaps = 29/217 (13%)

Query: 856  GLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWETLHNFPKVSILPGTPLSRADLRAV 915
            GL N ++PLRA      EL  IV +   +      E +  FP V  + G+  +   L   
Sbjct: 813  GLYNFIVPLRAYYRSRKELNPIVLLLDNKPDHHFLEAICCFPMVYYMEGSVDNLDSLLQC 872

Query: 916  NINLCDMCVILSANQN-NIDDTSLQDKECILASLNIKSM-QFDDSIGVLQANSQGFTPPG 973
             I   D  V++      + ++  + D + I+   N+++M +   S+ +            
Sbjct: 873  GIIYADNLVVVDKESTMSAEEDYMADAKTIV---NVQTMFRLFPSLSITT---------- 919

Query: 974  MDRSSPDNSPVHGMLRQPSITTGVNIPIITELVNDTNVQFLDQDDDDDPDTELYLTQPFA 1033
             + + P N        + S +  ++     E  N +N+ F+                PFA
Sbjct: 920  -ELTHPSNMRFMQFRAKDSYSLALSKLEKRERENGSNLAFM-------------FRLPFA 965

Query: 1034 CGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATP 1070
             G  F++S+LD+L+  ++  D ++T+ R L+    TP
Sbjct: 966  AGRVFSISMLDTLLYQSFVKDYMITITRLLLGLDTTP 1002



 Score = 34.7 bits (78), Expect = 0.58
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 12/73 (16%)

Query: 1150 QCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSQSSSKKSSSVHSI 1209
            Q T  YV+ NPP +  L P+D+++ L++ D         L+H + SSQ  S+KSS  H +
Sbjct: 1174 QNTLSYVLINPPPDTRLEPSDIVY-LIRSD--------PLAHVASSSQ--SRKSSCSHKL 1222

Query: 1210 PSTANRQNRPKSR 1222
             S+ N + R +++
Sbjct: 1223 -SSCNPETRDETQ 1234


>gi|27436974 potassium voltage-gated channel, Shab-related
           subfamily, member 2 [Homo sapiens]
          Length = 911

 Score = 64.7 bits (156), Expect = 5e-10
 Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 20/180 (11%)

Query: 224 FFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLG-LRFLRALRLIQF 282
           +F + + LRF+++ +K  F+    +V+D   + P +V+++L  S    L+F    R++Q 
Sbjct: 243 WFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQI 302

Query: 283 SEILQFLNILKTSN--------------SIKLVNLLSIFISTWLTAAGFIHLVENSGDPW 328
             I++ L ILK +               S   + LL +F++  +     +       +  
Sbjct: 303 FRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEKDEDA 362

Query: 329 ENFQNNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEII 388
             F +  A  +W  +     TM+TVGYGD+Y KT LG++      + G+ + A  +P I+
Sbjct: 363 TKFTSIPASFWWATI-----TMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIV 417


>gi|20070166 potassium voltage-gated channel, subfamily F, member 1
           [Homo sapiens]
          Length = 494

 Score = 64.7 bits (156), Expect = 5e-10
 Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 29/258 (11%)

Query: 153 AAEVGWMTSVKD-WAGVMISAQTLTGRVLVVLVFALSIGALVIYF---IDSSNPIESCQN 208
           AAE  W    K  W  +     +   RV+ VL F L + + V+     I     +++  N
Sbjct: 156 AAEGRWRRCQKCVWKFLEKPESSCPARVVAVLSFLLILVSSVVMCMGTIPELQVLDAEGN 215

Query: 209 FYKDFTLQ-IDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS 267
             +  TL+ ++ A   +F L + LR  ++ +KL F L   ++VD   + P +VS+ L   
Sbjct: 216 RVEHPTLENVETACIGWFTLEYLLRLFSSPNKLHFALSFMNIVDVLAILPFYVSLTLTH- 274

Query: 268 WLGLRFLRALRLIQFSEILQFLNILKT-----------------SNSIKLVNLLSIFIST 310
            LG R +    + Q  + L+ + I +                    S K + LL ++++ 
Sbjct: 275 -LGARMMELTNVQQAVQALRIMRIARIFKLARHSSGLQTLTYALKRSFKELGLLLMYLAV 333

Query: 311 WLTAAGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMV 370
            +     +        P   F++     +W      ++TM+TVGYGD+Y KTTLG+L   
Sbjct: 334 GIFVFSALGYTMEQSHPETLFKSIPQSFWWA-----IITMTTVGYGDIYPKTTLGKLNAA 388

Query: 371 FFILGGLAMFASYVPEII 388
              L G+   A  +  II
Sbjct: 389 ISFLCGVIAIALPIHPII 406


>gi|4826784 potassium voltage-gated channel, Shab-related subfamily,
           member 1 [Homo sapiens]
          Length = 858

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 20/180 (11%)

Query: 224 FFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLG-LRFLRALRLIQF 282
           +F + + LRF+++  K  F+    + +D   + P +V+++L  S    L+F    R++Q 
Sbjct: 239 WFTMEYLLRFLSSPKKWKFFKGPLNAIDLLAILPYYVTIFLTESNKSVLQFQNVRRVVQI 298

Query: 283 SEILQFLNILKTSN--------------SIKLVNLLSIFISTWLTAAGFIHLVENSGDPW 328
             I++ L ILK +               S   + LL +F++  +     +       +  
Sbjct: 299 FRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEKDEDD 358

Query: 329 ENFQNNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEII 388
             F++  A  +W  +     TM+TVGYGD+Y KT LG++      + G+ + A  +P I+
Sbjct: 359 TKFKSIPASFWWATI-----TMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIV 413


>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
          Length = 558

 Score = 61.6 bits (148), Expect = 4e-09
 Identities = 41/73 (56%), Positives = 47/73 (64%), Gaps = 15/73 (20%)

Query: 3   NGGGGGGG-------------SSGGGGGGGGSSLR--MSSNIHANHLSLDASSSSSSSSS 47
           NGGGGGGG             S+G GGGGGG S    ++S+   N  +  +SSSSSSSSS
Sbjct: 91  NGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSS 150

Query: 48  SSSSSSSSSSSSS 60
           SSSSSSSSSSSSS
Sbjct: 151 SSSSSSSSSSSSS 163



 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 36/77 (46%), Positives = 44/77 (57%), Gaps = 19/77 (24%)

Query: 3   NGGGGGGGSSGGGGGGGGSSLRMSSNIH-------------------ANHLSLDASSSSS 43
           +GGGGG   +GGGGGGGG     + N+                    A+   ++AS+ SS
Sbjct: 82  SGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSS 141

Query: 44  SSSSSSSSSSSSSSSSS 60
           SSSSSSSSSSSSSSSSS
Sbjct: 142 SSSSSSSSSSSSSSSSS 158



 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 28/52 (53%), Positives = 34/52 (65%)

Query: 2   ANGGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSS 53
           +NG GGGGG    GGG   S+   +S   ++  S  +SSSSSSSSSSSSSSS
Sbjct: 112 SNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSS 163


>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
          Length = 706

 Score = 61.6 bits (148), Expect = 4e-09
 Identities = 41/73 (56%), Positives = 47/73 (64%), Gaps = 15/73 (20%)

Query: 3   NGGGGGGG-------------SSGGGGGGGGSSLR--MSSNIHANHLSLDASSSSSSSSS 47
           NGGGGGGG             S+G GGGGGG S    ++S+   N  +  +SSSSSSSSS
Sbjct: 91  NGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSS 150

Query: 48  SSSSSSSSSSSSS 60
           SSSSSSSSSSSSS
Sbjct: 151 SSSSSSSSSSSSS 163



 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 36/77 (46%), Positives = 44/77 (57%), Gaps = 19/77 (24%)

Query: 3   NGGGGGGGSSGGGGGGGGSSLRMSSNIH-------------------ANHLSLDASSSSS 43
           +GGGGG   +GGGGGGGG     + N+                    A+   ++AS+ SS
Sbjct: 82  SGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSS 141

Query: 44  SSSSSSSSSSSSSSSSS 60
           SSSSSSSSSSSSSSSSS
Sbjct: 142 SSSSSSSSSSSSSSSSS 158



 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 28/52 (53%), Positives = 34/52 (65%)

Query: 2   ANGGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSS 53
           +NG GGGGG    GGG   S+   +S   ++  S  +SSSSSSSSSSSSSSS
Sbjct: 112 SNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSS 163


>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
          Length = 504

 Score = 61.6 bits (148), Expect = 4e-09
 Identities = 41/73 (56%), Positives = 47/73 (64%), Gaps = 15/73 (20%)

Query: 3   NGGGGGGG-------------SSGGGGGGGGSSLR--MSSNIHANHLSLDASSSSSSSSS 47
           NGGGGGGG             S+G GGGGGG S    ++S+   N  +  +SSSSSSSSS
Sbjct: 91  NGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSS 150

Query: 48  SSSSSSSSSSSSS 60
           SSSSSSSSSSSSS
Sbjct: 151 SSSSSSSSSSSSS 163



 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 36/77 (46%), Positives = 44/77 (57%), Gaps = 19/77 (24%)

Query: 3   NGGGGGGGSSGGGGGGGGSSLRMSSNIH-------------------ANHLSLDASSSSS 43
           +GGGGG   +GGGGGGGG     + N+                    A+   ++AS+ SS
Sbjct: 82  SGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSS 141

Query: 44  SSSSSSSSSSSSSSSSS 60
           SSSSSSSSSSSSSSSSS
Sbjct: 142 SSSSSSSSSSSSSSSSS 158



 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 28/52 (53%), Positives = 34/52 (65%)

Query: 2   ANGGGGGGGSSGGGGGGGGSSLRMSSNIHANHLSLDASSSSSSSSSSSSSSS 53
           +NG GGGGG    GGG   S+   +S   ++  S  +SSSSSSSSSSSSSSS
Sbjct: 112 SNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSS 163


>gi|88758576 Shaw-related voltage-gated potassium channel protein 4
           isoform c [Homo sapiens]
          Length = 626

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 31/194 (15%)

Query: 223 VFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLN-------RSWLG----L 271
           ++F L F +R +   D L F   + +++DF  + P ++ V L+       R  LG    +
Sbjct: 290 LWFTLEFLVRIVCCPDTLDFVKNLLNIIDFVAILPFYLEVGLSGLSSKAARDVLGFLRVV 349

Query: 272 RFLRALRLIQFSEILQFLNIL------KTSNSIKLVNLLSIFISTWLTAAGFIHLVENSG 325
           RF+R LR+ + +     L +L       T+  + L+  L++ +   L  A  I+  E  G
Sbjct: 350 RFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV---LIFATMIYYAERIG 406

Query: 326 ----DPWENFQN---NQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLA 378
               DP  N      N  + +W  V    VTM+T+GYGD+Y KT  G L      L G+ 
Sbjct: 407 ARPSDPRGNDHTDFKNIPIGFWWAV----VTMTTLGYGDMYPKTWSGMLVGALCALAGVL 462

Query: 379 MFASYVPEIIELIG 392
             A  VP I+   G
Sbjct: 463 TIAMPVPVIVNNFG 476


>gi|24497462 Shaw-related voltage-gated potassium channel protein 4
           isoform a [Homo sapiens]
          Length = 635

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 31/194 (15%)

Query: 223 VFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLN-------RSWLG----L 271
           ++F L F +R +   D L F   + +++DF  + P ++ V L+       R  LG    +
Sbjct: 290 LWFTLEFLVRIVCCPDTLDFVKNLLNIIDFVAILPFYLEVGLSGLSSKAARDVLGFLRVV 349

Query: 272 RFLRALRLIQFSEILQFLNIL------KTSNSIKLVNLLSIFISTWLTAAGFIHLVENSG 325
           RF+R LR+ + +     L +L       T+  + L+  L++ +   L  A  I+  E  G
Sbjct: 350 RFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV---LIFATMIYYAERIG 406

Query: 326 ----DPWENFQN---NQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLA 378
               DP  N      N  + +W  V    VTM+T+GYGD+Y KT  G L      L G+ 
Sbjct: 407 ARPSDPRGNDHTDFKNIPIGFWWAV----VTMTTLGYGDMYPKTWSGMLVGALCALAGVL 462

Query: 379 MFASYVPEIIELIG 392
             A  VP I+   G
Sbjct: 463 TIAMPVPVIVNNFG 476


>gi|24497464 Shaw-related voltage-gated potassium channel protein 4
           isoform b [Homo sapiens]
          Length = 582

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 31/194 (15%)

Query: 223 VFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLN-------RSWLG----L 271
           ++F L F +R +   D L F   + +++DF  + P ++ V L+       R  LG    +
Sbjct: 290 LWFTLEFLVRIVCCPDTLDFVKNLLNIIDFVAILPFYLEVGLSGLSSKAARDVLGFLRVV 349

Query: 272 RFLRALRLIQFSEILQFLNIL------KTSNSIKLVNLLSIFISTWLTAAGFIHLVENSG 325
           RF+R LR+ + +     L +L       T+  + L+  L++ +   L  A  I+  E  G
Sbjct: 350 RFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV---LIFATMIYYAERIG 406

Query: 326 ----DPWENFQN---NQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLA 378
               DP  N      N  + +W  V    VTM+T+GYGD+Y KT  G L      L G+ 
Sbjct: 407 ARPSDPRGNDHTDFKNIPIGFWWAV----VTMTTLGYGDMYPKTWSGMLVGALCALAGVL 462

Query: 379 MFASYVPEIIELIG 392
             A  VP I+   G
Sbjct: 463 TIAMPVPVIVNNFG 476


>gi|27436996 potassium voltage-gated channel, subfamily G, member 4
           [Homo sapiens]
          Length = 519

 Score = 58.5 bits (140), Expect = 4e-08
 Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 30/182 (16%)

Query: 224 FFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSV-----------------YLNR 266
           +F L F LRF+ A DK  F+    +++D   + P +VS+                 YL +
Sbjct: 272 WFSLEFCLRFVQAQDKCQFFQGPLNIIDILAISPYYVSLAVSEEPPEDGERPSGSSYLEK 331

Query: 267 SWLGLRFLRALRLIQFSEI------LQFLNILKTSNSIKLVNLLSIFISTWLTA-AGFIH 319
             L LR LRALR++    +      LQ L  L      +   LL +F++  +T  +  ++
Sbjct: 332 VGLVLRVLRALRILYVMRLARHSLGLQTLG-LTVRRCTREFGLLLLFLAVAITLFSPLVY 390

Query: 320 LVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAM 379
           + E        F +  A  +W      +++M+TVGYGD+  ++  G++  +  IL G+ +
Sbjct: 391 VAEKESGRVLEFTSIPASYWW-----AIISMTTVGYGDMVPRSVPGQMVALSSILSGILI 445

Query: 380 FA 381
            A
Sbjct: 446 MA 447


>gi|27436984 potassium voltage-gated channel, Shal-related
           subfamily, member 3 isoform 1 [Homo sapiens]
          Length = 655

 Score = 57.8 bits (138), Expect = 6e-08
 Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 13/191 (6%)

Query: 206 CQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLN 265
           C   Y      +D A  + F + + LR  AA  +  F   V S++D   + P ++ + + 
Sbjct: 218 CGERYSVAFFCLDTACVMIFTVEYLLRLFAAPSRYRFIRSVMSIIDVVAIMPYYIGLVMT 277

Query: 266 RS------WLGLRFLRALRLIQFSEILQFLNIL--KTSNSIKLVNLLSIFISTWLTAAGF 317
            +      ++ LR  R  R+ +FS   Q L IL     +    +  L   ++  +     
Sbjct: 278 NNEDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFAT 337

Query: 318 IHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGL 377
           +      G     F +  A ++W  +    VTM+T+GYGD+  KT  G++F     L G+
Sbjct: 338 VMFYAEKGSSASKFTSIPA-SFWYTI----VTMTTLGYGDMVPKTIAGKIFGSICSLSGV 392

Query: 378 AMFASYVPEII 388
            + A  VP I+
Sbjct: 393 LVIALPVPVIV 403


>gi|27436986 potassium voltage-gated channel, Shal-related
           subfamily, member 3 isoform 2 [Homo sapiens]
          Length = 636

 Score = 57.8 bits (138), Expect = 6e-08
 Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 13/191 (6%)

Query: 206 CQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLN 265
           C   Y      +D A  + F + + LR  AA  +  F   V S++D   + P ++ + + 
Sbjct: 218 CGERYSVAFFCLDTACVMIFTVEYLLRLFAAPSRYRFIRSVMSIIDVVAIMPYYIGLVMT 277

Query: 266 RS------WLGLRFLRALRLIQFSEILQFLNIL--KTSNSIKLVNLLSIFISTWLTAAGF 317
            +      ++ LR  R  R+ +FS   Q L IL     +    +  L   ++  +     
Sbjct: 278 NNEDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFAT 337

Query: 318 IHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGL 377
           +      G     F +  A ++W  +    VTM+T+GYGD+  KT  G++F     L G+
Sbjct: 338 VMFYAEKGSSASKFTSIPA-SFWYTI----VTMTTLGYGDMVPKTIAGKIFGSICSLSGV 392

Query: 378 AMFASYVPEII 388
            + A  VP I+
Sbjct: 393 LVIALPVPVIV 403


>gi|9789987 potassium voltage-gated channel, Shal-related subfamily,
           member 2 [Homo sapiens]
          Length = 630

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 13/180 (7%)

Query: 217 IDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYL------NRSWLG 270
           +D A  + F + + LR  AA  +  F   V S++D   + P ++ + +      + +++ 
Sbjct: 232 LDTACVMIFTVEYLLRLAAAPSRYRFVRSVMSIIDVVAILPYYIGLVMTDNEDVSGAFVT 291

Query: 271 LRFLRALRLIQFSEILQFLNIL--KTSNSIKLVNLLSIFISTWLTAAGFIHLVENSGDPW 328
           LR  R  R+ +FS   Q L IL     +    +  L   ++  +     +      G   
Sbjct: 292 LRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSA 351

Query: 329 ENFQNNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEII 388
             F +  A  +W  +    VTM+T+GYGD+  KT  G++F     L G+ + A  VP I+
Sbjct: 352 SKFTSIPA-AFWYTI----VTMTTLGYGDMVPKTIAGKIFGSICSLSGVLVIALPVPVIV 406


>gi|21217561 Shaw-related voltage-gated potassium channel protein 2
           isoform KV3.2a [Homo sapiens]
          Length = 613

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 25/191 (13%)

Query: 223 VFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLN-------RSWLG----L 271
           V+F   F +R + + +KL F   + +++DF  + P ++ V L+       +  LG    +
Sbjct: 291 VWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVV 350

Query: 272 RFLRALRLIQFSEILQFLNIL------KTSNSIKLVNLLSIFISTWLTAAGFIHLV---E 322
           RF+R LR+ + +     L +L       T+  + L+  L++ +  + T   +   V    
Sbjct: 351 RFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQP 410

Query: 323 NSGDPWENFQ-NNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFA 381
           N     E+ Q  N  + +W  V    VTM+T+GYGD+Y +T  G L      L G+   A
Sbjct: 411 NDPSASEHTQFKNIPIGFWWAV----VTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIA 466

Query: 382 SYVPEIIELIG 392
             VP I+   G
Sbjct: 467 MPVPVIVNNFG 477


>gi|21217563 Shaw-related voltage-gated potassium channel protein 2
           isoform KV3.2b [Homo sapiens]
          Length = 638

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 25/191 (13%)

Query: 223 VFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLN-------RSWLG----L 271
           V+F   F +R + + +KL F   + +++DF  + P ++ V L+       +  LG    +
Sbjct: 291 VWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVV 350

Query: 272 RFLRALRLIQFSEILQFLNIL------KTSNSIKLVNLLSIFISTWLTAAGFIHLV---E 322
           RF+R LR+ + +     L +L       T+  + L+  L++ +  + T   +   V    
Sbjct: 351 RFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQP 410

Query: 323 NSGDPWENFQ-NNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFA 381
           N     E+ Q  N  + +W  V    VTM+T+GYGD+Y +T  G L      L G+   A
Sbjct: 411 NDPSASEHTQFKNIPIGFWWAV----VTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIA 466

Query: 382 SYVPEIIELIG 392
             VP I+   G
Sbjct: 467 MPVPVIVNNFG 477


>gi|24497458 Shaw-related voltage-gated potassium channel protein 2
           isoform KV3.2c [Homo sapiens]
          Length = 558

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 25/191 (13%)

Query: 223 VFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLN-------RSWLG----L 271
           V+F   F +R + + +KL F   + +++DF  + P ++ V L+       +  LG    +
Sbjct: 291 VWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAKDVLGFLRVV 350

Query: 272 RFLRALRLIQFSEILQFLNIL------KTSNSIKLVNLLSIFISTWLTAAGFIHLV---E 322
           RF+R LR+ + +     L +L       T+  + L+  L++ +  + T   +   V    
Sbjct: 351 RFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERVGAQP 410

Query: 323 NSGDPWENFQ-NNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFA 381
           N     E+ Q  N  + +W  V    VTM+T+GYGD+Y +T  G L      L G+   A
Sbjct: 411 NDPSASEHTQFKNIPIGFWWAV----VTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIA 466

Query: 382 SYVPEIIELIG 392
             VP I+   G
Sbjct: 467 MPVPVIVNNFG 477


>gi|27436988 potassium voltage-gated channel, subfamily G, member 1
           [Homo sapiens]
          Length = 513

 Score = 55.5 bits (132), Expect = 3e-07
 Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 30/188 (15%)

Query: 224 FFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSV-----------------YLNR 266
           +F L F LR I A  K  F     +++D   + P ++++                 YL++
Sbjct: 278 WFSLEFLLRLIQAPSKFAFLRSPLTLIDLVAILPYYITLLVDGAAAGRRKPGAGNSYLDK 337

Query: 267 SWLGLRFLRALRLIQFSEI------LQFLNILKTSNSIKLVNLLSIFISTWLTA-AGFIH 319
             L LR LRALR++    +      LQ L  L      +   LL +F+   +   A  ++
Sbjct: 338 VGLVLRVLRALRILYVMRLARHSLGLQTLG-LTARRCTREFGLLLLFLCVAIALFAPLLY 396

Query: 320 LVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAM 379
           ++EN       F +  A  +W      ++TM+TVGYGD+  ++T G++  +  IL G+ +
Sbjct: 397 VIENEMADSPEFTSIPACYWWA-----VITMTTVGYGDMVPRSTPGQVVALSSILSGILL 451

Query: 380 FASYVPEI 387
            A  V  I
Sbjct: 452 MAFPVTSI 459


>gi|24497460 Shaw-related voltage-gated potassium channel protein 3
           [Homo sapiens]
          Length = 757

 Score = 54.7 bits (130), Expect = 5e-07
 Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 27/192 (14%)

Query: 223 VFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLN-------RSWLG----L 271
           V+F   F +R     DK+ F     +++D   + P ++ V L+       +  LG    +
Sbjct: 357 VWFTFEFLMRITFCPDKVEFLKSSLNIIDCVAILPFYLEVGLSGLSSKAAKDVLGFLRVV 416

Query: 272 RFLRALRLIQFSEILQFLNIL------KTSNSIKLVNLLSIFISTWLTAAGFIHLVENSG 325
           RF+R LR+ + +     L +L       T+  + L+  L++ +   L  A  I+  E  G
Sbjct: 417 RFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV---LIFATMIYYAERIG 473

Query: 326 -DPWENFQNNQALTYWECV----YLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMF 380
            DP +   +N   TY++ +    +  +VTM+T+GYGD+Y KT  G L      L G+   
Sbjct: 474 ADPDDILGSNH--TYFKNIPIGFWWAVVTMTTLGYGDMYPKTWSGMLVGALCALAGVLTI 531

Query: 381 ASYVPEIIELIG 392
           A  VP I+   G
Sbjct: 532 AMPVPVIVNNFG 543


>gi|4826786 Shaw-related voltage-gated potassium channel protein 1
           isoform B [Homo sapiens]
          Length = 511

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 27/202 (13%)

Query: 213 FTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLN------- 265
           F   I+    V+F   F +R I   +K+ F     +++DF  + P ++ V L+       
Sbjct: 244 FLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAA 303

Query: 266 RSWLG----LRFLRALRLIQFSEILQFLNIL------KTSNSIKLVNLLSIFISTWLTAA 315
           +  LG    +RF+R LR+ + +     L +L       T+  + L+  L++ +  + T  
Sbjct: 304 KDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMI 363

Query: 316 GFIHLV-----ENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMV 370
            +   +     + S     +F+N     +W      +VTM+T+GYGD+Y +T  G L   
Sbjct: 364 YYAERIGAQPNDPSASEHTHFKNIPIGFWWA-----VVTMTTLGYGDMYPQTWSGMLVGA 418

Query: 371 FFILGGLAMFASYVPEIIELIG 392
              L G+   A  VP I+   G
Sbjct: 419 LCALAGVLTIAMPVPVIVNNFG 440


>gi|163792201 Shaw-related voltage-gated potassium channel protein 1
           isoform A [Homo sapiens]
          Length = 585

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 27/202 (13%)

Query: 213 FTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLN------- 265
           F   I+    V+F   F +R I   +K+ F     +++DF  + P ++ V L+       
Sbjct: 244 FLTYIEGVCVVWFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAA 303

Query: 266 RSWLG----LRFLRALRLIQFSEILQFLNIL------KTSNSIKLVNLLSIFISTWLTAA 315
           +  LG    +RF+R LR+ + +     L +L       T+  + L+  L++ +  + T  
Sbjct: 304 KDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMI 363

Query: 316 GFIHLV-----ENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMV 370
            +   +     + S     +F+N     +W      +VTM+T+GYGD+Y +T  G L   
Sbjct: 364 YYAERIGAQPNDPSASEHTHFKNIPIGFWWA-----VVTMTTLGYGDMYPQTWSGMLVGA 418

Query: 371 FFILGGLAMFASYVPEIIELIG 392
              L G+   A  VP I+   G
Sbjct: 419 LCALAGVLTIAMPVPVIVNNFG 440


>gi|7657289 potassium channel, subfamily V, member 1 [Homo sapiens]
          Length = 500

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 22/170 (12%)

Query: 229 FGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLN---------------RSWLGLRF 273
           F LRF+   D+  F  +V +++D   + P ++++ +                R    LR 
Sbjct: 257 FVLRFLCVRDRCRFLRKVPNIIDLLAILPFYITLLVESLSGSQTTQELENVGRIVQVLRL 316

Query: 274 LRALRLIQFSEILQFLNIL--KTSNSIKLVNLLSIFISTWLTAAGFIHLVENSGDPWENF 331
           LRALR+++       L  L    +   + V LL +F+S  ++    +        P   F
Sbjct: 317 LRALRMLKLGRHSTGLRSLGMTITQCYEEVGLLLLFLSVGISIFSTVEYFAEQSIPDTTF 376

Query: 332 QNNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFA 381
            +     +W        +M+TVGYGD+   TT G++     IL G+ + A
Sbjct: 377 TSVPCAWWWATT-----SMTTVGYGDIRPDTTTGKIVAFMCILSGILVLA 421


>gi|27436981 potassium voltage-gated channel, Shal-related
           subfamily, member 1 [Homo sapiens]
          Length = 647

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 13/180 (7%)

Query: 217 IDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS------WLG 270
           +D A  + F   + LR  AA  +  F   V S++D   + P ++ + + ++      ++ 
Sbjct: 234 MDTACVLIFTGEYLLRLFAAPSRCRFLRSVMSLIDVVAILPYYIGLLVPKNDDVSGAFVT 293

Query: 271 LRFLRALRLIQFSEILQFLNIL--KTSNSIKLVNLLSIFISTWLTAAGFIHLVENSGDPW 328
           LR  R  R+ +FS   Q L IL     +    +  L   ++  +     +      G   
Sbjct: 294 LRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGTNK 353

Query: 329 ENFQNNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEII 388
            NF +  A  +W  +    VTM+T+GYGD+   T  G++F     L G+ + A  VP I+
Sbjct: 354 TNFTSIPA-AFWYTI----VTMTTLGYGDMVPSTIAGKIFGSICSLSGVLVIALPVPVIV 408


>gi|45383011 potassium voltage-gated channel, delayed-rectifier,
           subfamily S, member 2 [Homo sapiens]
          Length = 477

 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 54/232 (23%), Positives = 98/232 (42%), Gaps = 25/232 (10%)

Query: 165 WAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSNPIE---SCQNFYKDFTLQIDMAF 221
           W  +     ++  RV  +L   + +G+++   ++S    +   S  N  +D   +I   F
Sbjct: 174 WLALDNPGYSVLSRVFSILSILVVMGSIITMCLNSLPDFQIPDSQGNPGEDPRFEIVEHF 233

Query: 222 NV-FFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRAL-RL 279
            + +F      RF  A D L F+    +++D  ++ P ++++ +N        L  L R+
Sbjct: 234 GIAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIVPFYITLVVNLVVESTPTLANLGRV 293

Query: 280 IQFSEILQFLNILKTSN--------------SIKLVNLLSIFISTWLTAAGFIHLVENSG 325
            Q   +++   ILK +               S K V LL +++S  ++    +       
Sbjct: 294 AQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVGLLLLYLSVGISIFSVVAYTI--- 350

Query: 326 DPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGL 377
              E  +N    T   C +   V+M+TVGYGDV   TT G+L     IL G+
Sbjct: 351 ---EKEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLTASACILAGI 399


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,611,619
Number of Sequences: 37866
Number of extensions: 2016695
Number of successful extensions: 31897
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 19187
Number of HSP's gapped (non-prelim): 6989
length of query: 1236
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1122
effective length of database: 13,930,794
effective search space: 15630350868
effective search space used: 15630350868
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.