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Search of human proteins with 237820622
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|237820622 pleckstrin homology domain containing, family N
member 1 isoform a [Homo sapiens]
(611 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|237820622 pleckstrin homology domain containing, family N mem... 1251 0.0
gi|237820624 pleckstrin homology domain containing, family N mem... 1129 0.0
gi|166064038 PAK-interacting exchange factor beta isoform a [Hom... 68 3e-11
gi|166064036 PAK-interacting exchange factor beta isoform d [Hom... 68 3e-11
gi|166064034 PAK-interacting exchange factor beta isoform c [Hom... 68 3e-11
gi|22027528 PAK-interacting exchange factor beta isoform b [Homo... 68 3e-11
gi|4505573 PAK-interacting exchange factor beta isoform a [Homo ... 68 3e-11
gi|169168458 PREDICTED: hypothetical protein [Homo sapiens] 49 1e-05
gi|42821110 hypothetical protein LOC340602 [Homo sapiens] 47 4e-05
gi|22027525 Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo... 47 4e-05
gi|28559039 mediator complex subunit 1 [Homo sapiens] 45 1e-04
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 44 4e-04
gi|157311635 FAM83H [Homo sapiens] 43 7e-04
gi|163965366 nascent polypeptide-associated complex alpha subuni... 43 0.001
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 42 0.001
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 42 0.002
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 41 0.003
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 41 0.003
gi|148806908 fibronectin type III domain containing 1 [Homo sapi... 41 0.003
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 40 0.005
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 40 0.005
gi|209862845 nuclear factor of activated T-cells, cytoplasmic, c... 40 0.008
gi|27886563 nuclear factor of activated T-cells, cytoplasmic, ca... 40 0.008
gi|150170729 microtubule associated serine/threonine kinase 3 [H... 40 0.008
gi|33636717 hypothetical protein LOC80256 [Homo sapiens] 40 0.008
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 39 0.011
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 39 0.011
gi|38176151 Lunapark [Homo sapiens] 39 0.011
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 39 0.011
gi|153266778 arg tyrosine kinase isoform c [Homo sapiens] 39 0.014
>gi|237820622 pleckstrin homology domain containing, family N member
1 isoform a [Homo sapiens]
Length = 611
Score = 1251 bits (3237), Expect = 0.0
Identities = 611/611 (100%), Positives = 611/611 (100%)
Query: 1 MGNSHCVPQAPRRLRASFSRKPSLKGNREDSARMSAGLPGPEAARSGDAAANKLFHYIPG 60
MGNSHCVPQAPRRLRASFSRKPSLKGNREDSARMSAGLPGPEAARSGDAAANKLFHYIPG
Sbjct: 1 MGNSHCVPQAPRRLRASFSRKPSLKGNREDSARMSAGLPGPEAARSGDAAANKLFHYIPG 60
Query: 61 TDILDLENQRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELF 120
TDILDLENQRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELF
Sbjct: 61 TDILDLENQRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELF 120
Query: 121 PAHLYFQAHGSEGLTFQGLLPLTELSVCPLEGSREHAFQITGPLPAPLLVLCPSRAELDR 180
PAHLYFQAHGSEGLTFQGLLPLTELSVCPLEGSREHAFQITGPLPAPLLVLCPSRAELDR
Sbjct: 121 PAHLYFQAHGSEGLTFQGLLPLTELSVCPLEGSREHAFQITGPLPAPLLVLCPSRAELDR 180
Query: 181 WLYHLEKQTALLGGPRRCHSAPPQRRLTRLRTASGHEPGGSAVCASRVKLQHLPAQEQWD 240
WLYHLEKQTALLGGPRRCHSAPPQRRLTRLRTASGHEPGGSAVCASRVKLQHLPAQEQWD
Sbjct: 181 WLYHLEKQTALLGGPRRCHSAPPQRRLTRLRTASGHEPGGSAVCASRVKLQHLPAQEQWD 240
Query: 241 RLLVLYPTSLAIFSEELDGLCFKGELPLRAVHINLEEKEKQIRSFLIEGPLINTIRVVCA 300
RLLVLYPTSLAIFSEELDGLCFKGELPLRAVHINLEEKEKQIRSFLIEGPLINTIRVVCA
Sbjct: 241 RLLVLYPTSLAIFSEELDGLCFKGELPLRAVHINLEEKEKQIRSFLIEGPLINTIRVVCA 300
Query: 301 SYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVMGSGRGSLSSGGQTSWDSGCLAPPS 360
SYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVMGSGRGSLSSGGQTSWDSGCLAPPS
Sbjct: 301 SYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVMGSGRGSLSSGGQTSWDSGCLAPPS 360
Query: 361 TRTSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTELRRSGSSRSPGSKARAEGRG 420
TRTSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTELRRSGSSRSPGSKARAEGRG
Sbjct: 361 TRTSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTELRRSGSSRSPGSKARAEGRG 420
Query: 421 PVTPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFL 480
PVTPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFL
Sbjct: 421 PVTPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFL 480
Query: 481 SAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKD 540
SAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKD
Sbjct: 481 SAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKD 540
Query: 541 GGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSRDPGYDHLWDETLSSSHQKCPQLGG 600
GGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSRDPGYDHLWDETLSSSHQKCPQLGG
Sbjct: 541 GGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSRDPGYDHLWDETLSSSHQKCPQLGG 600
Query: 601 PEASGGLVQWI 611
PEASGGLVQWI
Sbjct: 601 PEASGGLVQWI 611
>gi|237820624 pleckstrin homology domain containing, family N member
1 isoform b [Homo sapiens]
Length = 576
Score = 1129 bits (2920), Expect = 0.0
Identities = 564/623 (90%), Positives = 564/623 (90%), Gaps = 59/623 (9%)
Query: 1 MGNSHCVPQAPRRLRASFSRKPSLKGNREDSARMSAGLPGPEAARSGDAAANKLFHYIPG 60
MGNSHCVPQAPRRLRASFSRKPSLKGNREDSARMSAGLPGPEAARSGDAAANKLFHYIPG
Sbjct: 1 MGNSHCVPQAPRRLRASFSRKPSLKGNREDSARMSAGLPGPEAARSGDAAANKLFHYIPG 60
Query: 61 TDILDLENQRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELF 120
TDILDLENQRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELF
Sbjct: 61 TDILDLENQRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELF 120
Query: 121 PAHLYFQAHGSEGLTFQGLLPLTELSVCPLEGSREHAFQITGPLPAPLLVLCPSRAELDR 180
PAHLYFQAHGSEGLTFQGLLPLTELSVCPLEGSREHAFQITGPLPAPLLVLCPSRAELDR
Sbjct: 121 PAHLYFQAHGSEGLTFQGLLPLTELSVCPLEGSREHAFQITGPLPAPLLVLCPSRAELDR 180
Query: 181 WLYHLEKQTALLGGPRRCHSAPP------------QRRLTRLRTASGHEPGGSAVCASRV 228
WLYHLEKQTALLGGPRRCHSAPP QRRLTRLRTASGHEPGGSAVCASRV
Sbjct: 181 WLYHLEKQTALLGGPRRCHSAPPQGSCGDELPWTLQRRLTRLRTASGHEPGGSAVCASRV 240
Query: 229 KLQHLPAQEQWDRLLVLYPTSLAIFSEELDGLCFKGELPLRAVHINLEEKEKQIRSFLIE 288
KLQHLPAQEQWDRLLVLYPTSLAIFSEELDGLCFKGELPLRAVHINLEEKEKQIRSFLIE
Sbjct: 241 KLQHLPAQEQWDRLLVLYPTSLAIFSEELDGLCFKGELPLRAVHINLEEKEKQIRSFLIE 300
Query: 289 GPLINTIRVVCASYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVMGSGRGSLSSGGQ 348
GPLINTIRVVCASYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVMGSGRGSLSSGGQ
Sbjct: 301 GPLINTIRVVCASYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVMGSGRGSLSSGGQ 360
Query: 349 TSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTELRRSGSSR 408
TSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQHTP
Sbjct: 361 TSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQHTP------------------------ 396
Query: 409 SPGSKARAEGRGPVTPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHR 468
LHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHR
Sbjct: 397 -----------------------LHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHR 433
Query: 469 RVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQS 528
RVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQS
Sbjct: 434 RVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQS 493
Query: 529 RAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSRDPGYDHLWDETL 588
RAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSRDPGYDHLWDETL
Sbjct: 494 RAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSRDPGYDHLWDETL 553
Query: 589 SSSHQKCPQLGGPEASGGLVQWI 611
SSSHQKCPQLGGPEASGGLVQWI
Sbjct: 554 SSSHQKCPQLGGPEASGGLVQWI 576
>gi|166064038 PAK-interacting exchange factor beta isoform a [Homo
sapiens]
Length = 646
Score = 67.8 bits (164), Expect = 3e-11
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 69 QRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELFPAHLYFQA 128
+R+ LE L+ + ++ LG V + ++V ++ S++ ++ YL LFP L +
Sbjct: 275 KRKELELQILTEAIRNWEGDDIKTLGNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLS 334
Query: 129 HGSE--GLTFQGLLPLTELSVCPLEGSREH--AFQITGPLPAPLLVLCPSRAELDRWLYH 184
G +QG LP T +++ LE S H AF+I+G + +LV C ++ +L W+ H
Sbjct: 335 ASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLQEWVEH 394
Query: 185 LEKQTAL--LGGPR-RCHSAP 202
L+KQT + +G P + HS P
Sbjct: 395 LQKQTKVTSVGNPTIKPHSVP 415
Score = 47.8 bits (112), Expect = 3e-05
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 220 GSAVCASRVKLQHLPAQEQWDRLLVLYPTSLAIFSEE--LDGLCFKGELPLRAVHIN-LE 276
G+ S+V +Q ++E+ +R L+L+P L + S + G ++G+LP + I LE
Sbjct: 300 GNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLE 359
Query: 277 EKEKQIRSFLIEGPLINTIRVVCASYEDYGHWLLCLRAVT 316
+ E +F I G +I I V C + +D W+ L+ T
Sbjct: 360 DSENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQT 399
>gi|166064036 PAK-interacting exchange factor beta isoform d [Homo
sapiens]
Length = 753
Score = 67.8 bits (164), Expect = 3e-11
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 69 QRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELFPAHLYFQA 128
+R+ LE L+ + ++ LG V + ++V ++ S++ ++ YL LFP L +
Sbjct: 403 KRKELELQILTEAIRNWEGDDIKTLGNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLS 462
Query: 129 HGSE--GLTFQGLLPLTELSVCPLEGSREH--AFQITGPLPAPLLVLCPSRAELDRWLYH 184
G +QG LP T +++ LE S H AF+I+G + +LV C ++ +L W+ H
Sbjct: 463 ASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLQEWVEH 522
Query: 185 LEKQTAL--LGGPR-RCHSAP 202
L+KQT + +G P + HS P
Sbjct: 523 LQKQTKVTSVGNPTIKPHSVP 543
Score = 47.8 bits (112), Expect = 3e-05
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 220 GSAVCASRVKLQHLPAQEQWDRLLVLYPTSLAIFSEE--LDGLCFKGELPLRAVHIN-LE 276
G+ S+V +Q ++E+ +R L+L+P L + S + G ++G+LP + I LE
Sbjct: 428 GNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLE 487
Query: 277 EKEKQIRSFLIEGPLINTIRVVCASYEDYGHWLLCLRAVT 316
+ E +F I G +I I V C + +D W+ L+ T
Sbjct: 488 DSENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQT 527
>gi|166064034 PAK-interacting exchange factor beta isoform c [Homo
sapiens]
Length = 803
Score = 67.8 bits (164), Expect = 3e-11
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 69 QRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELFPAHLYFQA 128
+R+ LE L+ + ++ LG V + ++V ++ S++ ++ YL LFP L +
Sbjct: 453 KRKELELQILTEAIRNWEGDDIKTLGNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLS 512
Query: 129 HGSE--GLTFQGLLPLTELSVCPLEGSREH--AFQITGPLPAPLLVLCPSRAELDRWLYH 184
G +QG LP T +++ LE S H AF+I+G + +LV C ++ +L W+ H
Sbjct: 513 ASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLQEWVEH 572
Query: 185 LEKQTAL--LGGPR-RCHSAP 202
L+KQT + +G P + HS P
Sbjct: 573 LQKQTKVTSVGNPTIKPHSVP 593
Score = 47.8 bits (112), Expect = 3e-05
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 220 GSAVCASRVKLQHLPAQEQWDRLLVLYPTSLAIFSEE--LDGLCFKGELPLRAVHIN-LE 276
G+ S+V +Q ++E+ +R L+L+P L + S + G ++G+LP + I LE
Sbjct: 478 GNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLE 537
Query: 277 EKEKQIRSFLIEGPLINTIRVVCASYEDYGHWLLCLRAVT 316
+ E +F I G +I I V C + +D W+ L+ T
Sbjct: 538 DSENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQT 577
>gi|22027528 PAK-interacting exchange factor beta isoform b [Homo
sapiens]
Length = 782
Score = 67.8 bits (164), Expect = 3e-11
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 69 QRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELFPAHLYFQA 128
+R+ LE L+ + ++ LG V + ++V ++ S++ ++ YL LFP L +
Sbjct: 432 KRKELELQILTEAIRNWEGDDIKTLGNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLS 491
Query: 129 HGSE--GLTFQGLLPLTELSVCPLEGSREH--AFQITGPLPAPLLVLCPSRAELDRWLYH 184
G +QG LP T +++ LE S H AF+I+G + +LV C ++ +L W+ H
Sbjct: 492 ASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLQEWVEH 551
Query: 185 LEKQTAL--LGGPR-RCHSAP 202
L+KQT + +G P + HS P
Sbjct: 552 LQKQTKVTSVGNPTIKPHSVP 572
Score = 47.8 bits (112), Expect = 3e-05
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 220 GSAVCASRVKLQHLPAQEQWDRLLVLYPTSLAIFSEE--LDGLCFKGELPLRAVHIN-LE 276
G+ S+V +Q ++E+ +R L+L+P L + S + G ++G+LP + I LE
Sbjct: 457 GNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLE 516
Query: 277 EKEKQIRSFLIEGPLINTIRVVCASYEDYGHWLLCLRAVT 316
+ E +F I G +I I V C + +D W+ L+ T
Sbjct: 517 DSENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQT 556
>gi|4505573 PAK-interacting exchange factor beta isoform a [Homo
sapiens]
Length = 646
Score = 67.8 bits (164), Expect = 3e-11
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 69 QRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELFPAHLYFQA 128
+R+ LE L+ + ++ LG V + ++V ++ S++ ++ YL LFP L +
Sbjct: 275 KRKELELQILTEAIRNWEGDDIKTLGNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLS 334
Query: 129 HGSE--GLTFQGLLPLTELSVCPLEGSREH--AFQITGPLPAPLLVLCPSRAELDRWLYH 184
G +QG LP T +++ LE S H AF+I+G + +LV C ++ +L W+ H
Sbjct: 335 ASPRMSGFIYQGKLPTTGMTITKLEDSENHRNAFEISGSMIERILVSCNNQQDLQEWVEH 394
Query: 185 LEKQTAL--LGGPR-RCHSAP 202
L+KQT + +G P + HS P
Sbjct: 395 LQKQTKVTSVGNPTIKPHSVP 415
Score = 47.8 bits (112), Expect = 3e-05
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 220 GSAVCASRVKLQHLPAQEQWDRLLVLYPTSLAIFSEE--LDGLCFKGELPLRAVHIN-LE 276
G+ S+V +Q ++E+ +R L+L+P L + S + G ++G+LP + I LE
Sbjct: 300 GNVTYMSQVLIQCAGSEEKNERYLLLFPNVLLMLSASPRMSGFIYQGKLPTTGMTITKLE 359
Query: 277 EKEKQIRSFLIEGPLINTIRVVCASYEDYGHWLLCLRAVT 316
+ E +F I G +I I V C + +D W+ L+ T
Sbjct: 360 DSENHRNAFEISGSMIERILVSCNNQQDLQEWVEHLQKQT 399
>gi|169168458 PREDICTED: hypothetical protein [Homo sapiens]
Length = 353
Score = 48.9 bits (115), Expect = 1e-05
Identities = 55/205 (26%), Positives = 77/205 (37%), Gaps = 27/205 (13%)
Query: 427 LDLTQLHRLSLESSPDAPDHTSETSHSPLYADP---YTPPATSHRRVTDVRGLEEFLSAM 483
L+ +++ LE + H P P Y P + R RG S
Sbjct: 102 LENLEVYTFLLEKRLKKLSREGSSHHLPRQVRPGPVYKPAPARNHRPRGGRGKASPTSFH 161
Query: 484 QSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQR---HRGSAKD 540
S R P +PL S+P SVP + S S P LS A + + HR A
Sbjct: 162 VSPRAPP--APLASMPSSVPKTSIESLGS----PSSLSSSQASEPLCPLKHPSHRPPAST 215
Query: 541 GGPQPPDAPQ----LVSSAREGSPEPWLPL------TDGRSPRRSRDPGYDHLWDETLSS 590
P P + + L S + PEP PL GRSP R R+PG+ W +++ +
Sbjct: 216 LSPNPTSSTESLGYLSSLSSSQPPEPLRPLKHPSHKPHGRSPPRRRNPGWVS-WSDSMQA 274
Query: 591 SHQK----CPQLGGPEASGGLVQWI 611
+ CP PE S W+
Sbjct: 275 DSETDAIICPMCKAPERSCPHTWWV 299
>gi|42821110 hypothetical protein LOC340602 [Homo sapiens]
Length = 503
Score = 47.4 bits (111), Expect = 4e-05
Identities = 83/293 (28%), Positives = 107/293 (36%), Gaps = 51/293 (17%)
Query: 358 PPSTRT-SHSLPESSV---PSTVGCSSQHTPDQANSDRASIGRRRTELRRSGSSR----S 409
PP R LP SS PS+ CS T QA ++ +E R + SR +
Sbjct: 162 PPGRRLFPEPLPPSSPGFRPSSYPCSGASTSSQATQPGPALLSHASEARPATRSRITLVA 221
Query: 410 PGSKARAEGRGPVT--------------PLHLDLTQLHRLSLESSPDAPDHTSETSHSPL 455
+ RA G GPV HLD RLS ES+P + P
Sbjct: 222 SALRRRASGPGPVIRGCTAQPGPAFPHRATHLDPA---RLSPESAPGPARRGRASVPGPA 278
Query: 456 Y--ADPYTPPATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDP--RSCS 511
D PA R V SA SAR S+P P++ V SD RS S
Sbjct: 279 RRGCDSAPGPARRGRDSAPVSAPRGRDSAPGSARRGRDSAPGPALRVRTARSDAGHRSTS 338
Query: 512 SGPAGPYLLSKKGALQSRAAQRH--RGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDG 569
+ P G L S+ +S R GSA + + +L +R GSP+P +P
Sbjct: 339 TTP-GTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAFQSRSGSPDPEVP--SR 395
Query: 570 RSP-------RRSRDPG--------YDHLWDETLSSSHQKCPQLGGPEASGGL 607
SP R+ P WDE+ SSS+ P S GL
Sbjct: 396 ASPPVWHAVRMRASSPSPPGRFFLPIPQQWDESSSSSY--ASNSSSPSRSPGL 446
>gi|22027525 Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo
sapiens]
Length = 776
Score = 47.4 bits (111), Expect = 4e-05
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Query: 69 QRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQLRFQHSQDVSDCYLELFPAHLYFQA 128
+R+ LE LS + ++NLG V+ ++V +++ ++ + YL LF L +
Sbjct: 423 KRKQLELQILSEPIQAWEGEDIKNLGNVIFMSQVMVQYGACEEKEERYLMLFSNVLIMLS 482
Query: 129 HGSE--GLTFQGLLPLTELSVCPLEG--SREHAFQITGPLPAPLLVLCPSRAELDRWLYH 184
G +QG +P+ V L+ + F+ITG ++V C + + WL
Sbjct: 483 ASPRMSGFIYQGKIPIAGTVVTRLDEIEGNDCTFEITGNTVERIVVHCNNNQDFQEWLEQ 542
Query: 185 LEKQTALLGGPRRCHS 200
L + L+ GP C S
Sbjct: 543 LNR---LIRGPASCSS 555
Score = 46.2 bits (108), Expect = 9e-05
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 22/200 (11%)
Query: 220 GSAVCASRVKLQHLPAQEQWDRLLVLYPTSLAIFSEE--LDGLCFKGELPLRAVHIN-LE 276
G+ + S+V +Q+ +E+ +R L+L+ L + S + G ++G++P+ + L+
Sbjct: 448 GNVIFMSQVMVQYGACEEKEERYLMLFSNVLIMLSASPRMSGFIYQGKIPIAGTVVTRLD 507
Query: 277 EKEKQIRSFLIEGPLINTIRVVCASYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVM 336
E E +F I G + I V C + +D+ WL L + P + S
Sbjct: 508 EIEGNDCTFEITGNTVERIVVHCNNNQDFQEWLEQLNRLIR----GPASCSSLSKTSSSS 563
Query: 337 GSGRGSLSSGGQ-----------TSWDSGCLAP-PSTRTSHSLPESSVPSTVGCSSQHTP 384
S S SS GQ W CL P P R S +L S + S +P
Sbjct: 564 CSAHSSFSSTGQPRGPLEPPQIIKPWSLSCLRPAPPLRPSAALGYKERMSYILKESSKSP 623
Query: 385 DQANSDRASIGRRRTELRRS 404
+ + + +R+TE + S
Sbjct: 624 ---KTMKKFLHKRKTERKPS 640
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 45.4 bits (106), Expect = 1e-04
Identities = 59/238 (24%), Positives = 91/238 (38%), Gaps = 24/238 (10%)
Query: 331 PGSQVMGSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQHTPDQANSD 390
P S + GS+SS G S S + S+ ++ +SS + G SS S
Sbjct: 1077 PSSHSQYTSSGSVSSSGSKSHHSHSSSSSSSASTSGKMKSS--KSEGSSSSKLSSSMYSS 1134
Query: 391 RASIGRRRTELRRSGSSRSPGS---------------KARAEGRGPVTPLHLDLTQLHRL 435
+ S G +++ S S PGS K + +G+ P L L +
Sbjct: 1135 QGSSGSSQSK-NSSQSGGKPGSSPITKHGLSSGSSSTKMKPQGK----PSSLMNPSLSKP 1189
Query: 436 SLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAMQSARGPTPSSPL 495
++ S P S+ SP+ P TPP++ + +S S+ G SS L
Sbjct: 1190 NISPSHSRPPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTSSSSGMKSSSGL 1249
Query: 496 PSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVS 553
S S+ P S +S A S G+ S + +H GS+K P P L +
Sbjct: 1250 GS-SGSLSQKTPPSSNSCTASSSSFSSSGSSMSSSQNQH-GSSKGKSPSRNKKPSLTA 1305
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 43.9 bits (102), Expect = 4e-04
Identities = 59/234 (25%), Positives = 83/234 (35%), Gaps = 59/234 (25%)
Query: 410 PGSKARAEGRGPVTPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYA---DPYTPPATS 466
P + +R GR P+TP R E++ P+ TS + +P A P P +
Sbjct: 462 PATCSRKRGRPPLTP-------SQRAEREAARAGPEGTSPPTPTPSTATGGPPEDSPTVA 514
Query: 467 HRRVTDVRGLEEFLSAMQSARGP------------------------------TPSSPLP 496
+ T ++ + +F+ + SAR T S P+P
Sbjct: 515 PKSTTFLKNIRQFIMPVVSARSSRVIKTPRRFMDEDPPKPPKVEVSPVLRPPITTSPPVP 574
Query: 497 SVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSSAR 556
P VP+ P + P+ P L +K R S P PP AP +
Sbjct: 575 QEPAPVPS--PPRAPTPPSTPVPLPEKRRSILREPTFRWTSLTRELPPPPPAPPPPPAP- 631
Query: 557 EGSPEPWLPLTDGRSPRRSRDPGYDHLWDETLSSSHQKC-------PQLGGPEA 603
SP P P T R P R P + T S +H K P LG PEA
Sbjct: 632 --SPPP-APATSSRRPLLLRAPQF------TPSEAHLKIYESVLTPPPLGAPEA 676
Score = 30.4 bits (67), Expect = 5.0
Identities = 35/135 (25%), Positives = 51/135 (37%), Gaps = 10/135 (7%)
Query: 410 PGSKARAEGRGPVTPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTP--PATSH 467
P + AR G + LT+L R + +P AP + +P + P PA
Sbjct: 174 PKTPARKRGEEGTERMVQALTELLRRA--QAPQAPRSRACEPSTPRRSRGRPPGRPAGPC 231
Query: 468 RRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQ 527
RR + + A + P P P P VPV + C GP ++G
Sbjct: 232 RRKQ-----QAVVVAEAAVTIPKPEPPPPVVPVKHQTGSWK-CKEGPGPGPGTPRRGGQS 285
Query: 528 SRAAQRHRGSAKDGG 542
SR + RG + GG
Sbjct: 286 SRGGRGGRGRGRGGG 300
>gi|157311635 FAM83H [Homo sapiens]
Length = 1179
Score = 43.1 bits (100), Expect = 7e-04
Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 45/208 (21%)
Query: 401 LRRSGSSRSPGSKARAEG-----RGPVTPLHLDLTQLHRLSLESSPDAPDHT-SETSHSP 454
L RSGS R P A+ +G +PL L+ + H++ S +P E SP
Sbjct: 823 LGRSGSDRLPSRFLSAQSHSTSPQGLDSPLPLEGSGAHQVLHNESKGSPTSAYPERKGSP 882
Query: 455 LYADPYTPPATSHRRVTDVRGLEEFLSAMQSA----RG----PTP---SSPLPSVP---- 499
P S RR + G E + SA RG P P SSP+P VP
Sbjct: 883 T-------PGFSTRRGSPTTGFIEQKGSPTSAYPERRGSPVPPVPERRSSPVPPVPERRG 935
Query: 500 ---VSVPASDPRS--CSSGPAGPYLLSKKGALQSRAAQRHRGSAK---DGG-PQP----- 545
+++ P++ GP+GP + +KG+L+ R +G + +GG P P
Sbjct: 936 SLTLTISGESPKAGPAEEGPSGPMEVLRKGSLRLRQLLSPKGERRMEDEGGFPVPQENGQ 995
Query: 546 PDAPQLVSSAREGSPEPWLPLTDGRSPR 573
P++P+ +S + S E T+ R PR
Sbjct: 996 PESPRRLSLGQGDSTE---AATEERGPR 1020
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 42.7 bits (99), Expect = 0.001
Identities = 62/261 (23%), Positives = 97/261 (37%), Gaps = 20/261 (7%)
Query: 319 EGAPPLPGAE--SFPGSQVMGSGRGSLSSGGQTSWD-SGCLAPPSTRTSHSLPESSVPST 375
+GAP P A S G S +G+ ++ T G LA PS + + + P ++ PS
Sbjct: 1169 KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSP 1228
Query: 376 VGCSSQHTPDQANSDRASIGRRRTELRRSGSSRSPGSKARAEGRGPVTPLHLDLTQLHRL 435
G + +P A + A+ T G +P K P P + L
Sbjct: 1229 KGGLATPSPKGAPTTPAA-----TPPSPKGGPATPPPKG-----APTPPAATPPSLKGGL 1278
Query: 436 SLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAMQSARG-PTPSSP 494
+ AP+ T SP +PP + + +G PTP +
Sbjct: 1279 ATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAV 1338
Query: 495 LPSVP---VSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQL 551
P P ++PA+ P S GP P SK+G A H+G P P P +
Sbjct: 1339 TPPSPKGTPTLPATTP-SSKGGPTTP--SSKEGPTPPAATPSHKGGPAMTPPSPKRGPAI 1395
Query: 552 VSSAREGSPEPWLPLTDGRSP 572
S + + +PL+ ++P
Sbjct: 1396 PSPKGDPTSPAVIPLSPKKAP 1416
Score = 37.0 bits (84), Expect = 0.053
Identities = 57/237 (24%), Positives = 84/237 (35%), Gaps = 35/237 (14%)
Query: 318 REGAPPLPGAESFPGSQVMGSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSVPSTVG 377
+EG P P + P + S S T G A PS + + + P ++ PS G
Sbjct: 897 KEG-PATPAPKQAPALSMTSS---SPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKG 952
Query: 378 CSSQHTPDQANSDRASI-----GRRRTELRRSGSSRSPGSKARAEGRGPVTPLHLDLTQL 432
+ +P A + A+ G T + G+ P + + GP TP
Sbjct: 953 GPATPSPKWAPTPPAATPPSPKGGPATPSPK-GAPTPPAATPPSPKGGPATP-------- 1003
Query: 433 HRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAMQSARGPTPS 492
S + +P P T + A P+ A++ T S +G +
Sbjct: 1004 ---SPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATP-----------PSPKGSPAA 1049
Query: 493 SPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAP 549
+PLP + PA+ S GPA P S KGA AA P P AP
Sbjct: 1050 TPLPKGAPTTPAATLPSPKGGPATP---SLKGAPTPPAATPPSPKGGPATPSPKGAP 1103
Score = 35.4 bits (80), Expect = 0.15
Identities = 61/249 (24%), Positives = 80/249 (32%), Gaps = 64/249 (25%)
Query: 358 PPSTRTSHSLPESSVPSTVGCSSQHTP--DQANSDRASIGRRRTELRRS----GSSRSPG 411
PP T+ + +S + V S + P D S AS T L S G S SP
Sbjct: 745 PPGTKKVDGISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQ 804
Query: 412 SKARAEGRG-------------PVTPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYAD 458
+K +G PV+P+ + LS + S D+P T+HSP
Sbjct: 805 TKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSP----ATTHSPTPPS 860
Query: 459 PYTPPATSHRRVTDVRG---------------------------------LEEFLSAMQS 485
P P S +G L S+ +
Sbjct: 861 PKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKK 920
Query: 486 ARGPT-----PSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKD 540
AR P+SP P + PA+ P S GPA P S K A AA
Sbjct: 921 ARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATP---SPKWAPTPPAATPPSPKGGP 977
Query: 541 GGPQPPDAP 549
P P AP
Sbjct: 978 ATPSPKGAP 986
Score = 32.7 bits (73), Expect = 1.0
Identities = 64/281 (22%), Positives = 86/281 (30%), Gaps = 57/281 (20%)
Query: 319 EGAPPLPGA--ESFPGSQVMGSGRGSLSSGGQTSWDSG-CLAPPSTRTSHSLPESSVPST 375
+G P LP S G S G S G + PPS + ++P T
Sbjct: 1344 KGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPT 1403
Query: 376 VGCSSQHTPDQANSDRASIGRRRTELRRSGSSRSPGSKARAEGRGPVTPLHLDLTQLHRL 435
+P +A + T + R G A +G +TP + L +
Sbjct: 1404 SPAVIPLSPKKAPA---------TPVTREG--------AATPSKGDLTPPAVTPVSLKKA 1446
Query: 436 SLESSPDAPDHTSETSHSPLYA-----DPYTPPATSHRRVTDVRGLEEFLSAMQSARGPT 490
S+P T + P P PPA A S+
Sbjct: 1447 PATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQ-------------VATSSSPKKA 1493
Query: 491 PSSPLPSVPVSVPASDPRSCSSGPAGP-----------YLLSK--------KGALQSRAA 531
P++P P ++PA P S PA P LLSK K AL A
Sbjct: 1494 PATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAM 1553
Query: 532 QRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRSP 572
P P +AP SS SP P T +P
Sbjct: 1554 TVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAP 1594
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 42.4 bits (98), Expect = 0.001
Identities = 60/222 (27%), Positives = 81/222 (36%), Gaps = 23/222 (10%)
Query: 357 APPSTRTSHSLPESSVPSTVGCSSQHTPDQANS-DRASIGRRRTELRRSGSSRSPGSKAR 415
AP + +S LP SS+P S DQ +S ++ S + L ++G S PG+
Sbjct: 1323 APEAPESSPPLPLSSLPPEASQDSAPYKDQLSSKEQPSFLASQQLLSQAGPSNPPGAPPA 1382
Query: 416 --AEGRGPVTPLHLDLTQ----------LHRLSLESSPDAPDH-TSETSHSPLYADPYTP 462
A PVT L D S P P TSE S A+ +
Sbjct: 1383 PLAPSSPPVTALPQDGAAPATSTMPEPASGTASQAGGPGTPQGLTSELETSQPLAETHEA 1442
Query: 463 PATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPA----GPY 518
P V GL A ++A S+P +P P P S + PA P
Sbjct: 1443 PLAVQPLVV---GLAPCTPAPEAASTRDASAPREPLPPPAPEPSPHSGTPQPALGQPAPL 1499
Query: 519 LLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSSAREGSP 560
L + GA+ +Q S G PP P + S EG P
Sbjct: 1500 LPAAVGAVSLATSQ--LPSPPLGPTVPPQPPSALESDGEGPP 1539
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 41.6 bits (96), Expect = 0.002
Identities = 55/236 (23%), Positives = 81/236 (34%), Gaps = 34/236 (14%)
Query: 389 SDRASIGRRRTELRRSGSSRSPGSKARAEGRGPVTPLHLDLTQLHRLSLESSPDAPDHTS 448
S+ +S R R + + RS + + R P R S+ AP S
Sbjct: 200 SESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPK--S 257
Query: 449 ETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPS---VPVSVPA- 504
+H AD + TS R + + R P+P+S P S P
Sbjct: 258 RRAHRSTSADSASSSDTSRSRSRSAAAKTH--TTALAGRSPSPASGRRGEGDAPFSEPGT 315
Query: 505 ------SDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDG-GPQPPDAPQLVSSARE 557
S P + + P+ PY K + A + + GP+PP L++
Sbjct: 316 TSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHG 375
Query: 558 GSPEP--WLPLT-------DGRSPRRSRDPGYDHLWDETLSSSHQKCPQLGGPEAS 604
GSP+P PL+ SP R R P S +K PQ E+S
Sbjct: 376 GSPQPLATTPLSQEPVNPPSEASPTRDRSP----------PKSPEKLPQSSSSESS 421
Score = 38.5 bits (88), Expect = 0.018
Identities = 70/269 (26%), Positives = 96/269 (35%), Gaps = 46/269 (17%)
Query: 323 PLPGAESFPGSQVMGSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQH 382
P PG P S V G S+G Q L P R S S SS S+ SS
Sbjct: 2497 PAPGV---PHSDV---GEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSS 2550
Query: 383 TPDQANSDRASIG-------RRRTELRRSGSSRSPGSKARAEGRGP-VTPLHLDLTQLHR 434
+ ++ +S + L+R S +A EGR P TP + R
Sbjct: 2551 SSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTP----AKRKRR 2606
Query: 435 LSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAMQSARGPTPSS- 493
S SS + +S +S S + + ++S S+ S+ P+P+
Sbjct: 2607 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------SSSSSSSSPSPAKP 2654
Query: 494 -----PLPSVPVSVPASDPRSCSSGPAGPY-LLSKKGALQSRAAQRHRGSAKDGGPQPPD 547
P P+ P P + RS S P P L +L +R R S PQP
Sbjct: 2655 GPQALPKPASPKKPPPGERRSRS--PRKPIDSLRDSRSLSYSPVERRRPS-----PQPSP 2707
Query: 548 APQLVSSAREGSPEPWLPLTDGRSPRRSR 576
Q SS+ GS D RSP R
Sbjct: 2708 RDQQSSSSERGSRRG--QRGDSRSPSHKR 2734
Score = 37.7 bits (86), Expect = 0.031
Identities = 58/226 (25%), Positives = 80/226 (35%), Gaps = 23/226 (10%)
Query: 359 PSTRTSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTELRRSGSSRS--PGSKARA 416
P+ R+ S S P+ G S TP + R+ RT RRSG SRS P + R+
Sbjct: 640 PARRSGRS--RSRTPARRGRSRSRTPARRGRSRS-----RTPARRSGRSRSRTPARRGRS 692
Query: 417 EGRGPVTPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGL 476
R P + + R S P + S ++ TS RR
Sbjct: 693 RSRTPRRGRSRSRSLVRR--GRSHSRTPQRRGRSGSS---SERKNKSRTSQRRSRSNSSP 747
Query: 477 EEFLSAMQSARGPTPSSPLP------SVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRA 530
E S + S R + SSP S+ S+ S P P S+ G+ Q +A
Sbjct: 748 EMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPP-RRSRSGSSQPKA 806
Query: 531 AQR--HRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRR 574
R R S P P + S S P + G PR+
Sbjct: 807 KSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQ 852
Score = 37.7 bits (86), Expect = 0.031
Identities = 70/274 (25%), Positives = 93/274 (33%), Gaps = 50/274 (18%)
Query: 342 SLSSGGQTSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQHTPDQANSDRASI-----GR 396
S S G +S + L+P + + S+ S V + TP + S AS G
Sbjct: 1375 STRSSGHSSSE---LSPDAVEKAGMSSNQSISSPVLDAVPRTPSRERSSSASSPEMKDGL 1431
Query: 397 RRTELRRSGSSRSPG---------------------------SKARAEGRGPVTPLHLDL 429
RT RRS S SPG S+ R+E P L
Sbjct: 1432 PRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQ 1491
Query: 430 TQLHRLSLESSPDAPDH----TSETSHSPLYADPYT---PPATSHRRVTDVRGLEEFLSA 482
T R SSP+ + E S S D T P R + L+ SA
Sbjct: 1492 TPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSA 1551
Query: 483 MQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGG 542
R + SSP P S P + K L R ++ GS+ +
Sbjct: 1552 SPQERSESDSSPDSKAKTRTPLRQRSRSGSSPE----VDSKSRLSPRRSR--SGSSPEVK 1605
Query: 543 PQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSR 576
+P AP+ S + SPEP P PRRSR
Sbjct: 1606 DKPRAAPR-AQSGSDSSPEPKAP-APRALPRRSR 1637
Score = 36.6 bits (83), Expect = 0.069
Identities = 60/239 (25%), Positives = 84/239 (35%), Gaps = 30/239 (12%)
Query: 357 APPSTRTSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTELRRSGSSRSPGSKARA 416
AP S R S S S+ D + S S + +G S SP S R
Sbjct: 254 APKSRRAHRSTSADSASSS---------DTSRSRSRSAAAKTHTTALAGRSPSPASGRRG 304
Query: 417 EGRGPVTPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGL 476
EG P + TQ S E++ P E T P+ S R +
Sbjct: 305 EGDAPFSEPGTTSTQ-RPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEP 363
Query: 477 EEFLSAMQSARGPTP----SSPLPSVPVSVPA-SDPRSCSSGPAGPYLLSKKGALQS--- 528
+ G +P ++PL PV+ P+ + P S P P L + + +S
Sbjct: 364 PAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPP 423
Query: 529 ----RAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRS-PRRSRDPGYDH 582
RH S+ + P+P AP S RE S P + RS R RD + H
Sbjct: 424 SPQPTKVSRHASSSPE-SPKPAPAP---GSHREISSS---PTSKNRSHGRAKRDKSHSH 475
Score = 36.2 bits (82), Expect = 0.091
Identities = 63/268 (23%), Positives = 92/268 (34%), Gaps = 15/268 (5%)
Query: 318 REGAPPLPGAESFPGSQV-MGSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSVPSTV 376
++G P P S GS + G G+ S + G P T + S P
Sbjct: 1428 KDGLPRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPK 1487
Query: 377 GCSSQHTPDQANSDRASIGRR--RTELRRSGSSRSPGSKARAEGRGPVTPLHLDLTQLHR 434
P + + + + RSGS S K A TPL
Sbjct: 1488 ALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVAR-----TPLGQRSRSGSS 1542
Query: 435 LSLESSPDA-PDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAMQSARGPTPSS 493
L+ P A P SE+ SP P R ++ S + R + SS
Sbjct: 1543 QELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDS-KSRLSPRRSRSGSS 1601
Query: 494 P-LPSVPVSVPASDPRSCSSG-PAGPYLLSKKGALQSRAAQRHRGSAKDGGPQP---PDA 548
P + P + P + S SS P P + +S ++ + RG + +G P+
Sbjct: 1602 PEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEH 1661
Query: 549 PQLVSSAREGSPEPWLPLTDGRSPRRSR 576
P +AR GS P T R+P R R
Sbjct: 1662 PPKSRTARRGSRSSPEPKTKSRTPPRRR 1689
Score = 35.8 bits (81), Expect = 0.12
Identities = 59/222 (26%), Positives = 85/222 (38%), Gaps = 26/222 (11%)
Query: 338 SGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSVP--------STVGCSSQH---TPDQ 386
S R S S D AP + S S PE P S G SS+ +P+
Sbjct: 1592 SPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEG 1651
Query: 387 ANSDRASIG---RRRTELRRSGSSRSPGSKARAEGRGPVTPLHLDLTQLHRLS--LESSP 441
++S +S + RT R S SS P +K+R R + +LT+ RLS S+
Sbjct: 1652 SSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSAS 1711
Query: 442 DAPDHTSET----SHSPLYADPYTPPATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPS 497
+P+ S T SP + P PA R R + S RG +PS
Sbjct: 1712 SSPETRSRTPPRHRRSPSVSSP--EPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPK--- 1766
Query: 498 VPVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAK 539
P + S RS + G+ QS + +R R ++
Sbjct: 1767 -PRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSR 1807
Score = 35.4 bits (80), Expect = 0.15
Identities = 53/210 (25%), Positives = 74/210 (35%), Gaps = 27/210 (12%)
Query: 377 GCSSQHTPDQANSDRASIGRR---RTELRRSGSSRSPGSK----ARAEGRGPVTPLHLDL 429
G S TP + +S R+ RT RRS S+ SP K + R +P
Sbjct: 711 GRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAK 770
Query: 430 TQLH-RLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAMQSARG 488
++L R SL S P S+T + P A S T R S +
Sbjct: 771 SRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSR---TPPRRSRSSSSPPPKQKS 827
Query: 489 PTPS-------SPLPSVP---------VSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQ 532
TPS SP P V ++ P ++ +S + + S L+SR
Sbjct: 828 KTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPS 887
Query: 533 RHRGSAKDGGPQPPDAPQLVSSAREGSPEP 562
RH S P S +R SP+P
Sbjct: 888 RHSCSGSSPPRVKSSTPPRQSPSRSSSPQP 917
Score = 33.1 bits (74), Expect = 0.77
Identities = 58/230 (25%), Positives = 72/230 (31%), Gaps = 47/230 (20%)
Query: 345 SGGQTSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTELRRS 404
SG DS P S S PE +Q D + +A R RS
Sbjct: 1579 SGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRS 1638
Query: 405 GSSRSPGSKARAEGRGPVTPLHLDLTQLHRLSLESSPDAPDHTSETSH-SPLYADPYTPP 463
GSS ++GRGP + S ESSP+ P + S +P T
Sbjct: 1639 GSS--------SKGRGP--------SPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKS 1682
Query: 464 ATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKK 523
T RR + E A S R RS SS P
Sbjct: 1683 RTPPRRRSSRSSPELTRKARLSRRS-------------------RSASSSPE-------- 1715
Query: 524 GALQSRAAQRHRGSAKDGGPQPPDAPQLVSSARE-GSPEPWLPLTDGRSP 572
+SR RHR S P+P + + R SP GRSP
Sbjct: 1716 --TRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSP 1763
Score = 32.7 bits (73), Expect = 1.0
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 370 SSVPSTVGCSSQHTPDQANSDRASI-----GRRRTELRRSGSSRSPGSKARAEGRGPVTP 424
S P+T G S TP + R+ R RT RR SR+P + R+ R P
Sbjct: 564 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARR 623
Query: 425 LHLDLTQLHRLSLESSP 441
+ + R S SP
Sbjct: 624 RSRTRSPVRRRSRSRSP 640
Score = 32.3 bits (72), Expect = 1.3
Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 3/89 (3%)
Query: 318 REGAPPLP---GAESFPGSQVMGSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSVPS 374
REG PP P + S S S SS +S S + S+ +S S SS PS
Sbjct: 2591 REGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS 2650
Query: 375 TVGCSSQHTPDQANSDRASIGRRRTELRR 403
Q P A+ + G RR+ R
Sbjct: 2651 PAKPGPQALPKPASPKKPPPGERRSRSPR 2679
Score = 32.0 bits (71), Expect = 1.7
Identities = 66/284 (23%), Positives = 93/284 (32%), Gaps = 34/284 (11%)
Query: 318 REGAPPLPGAESFPGSQVMGSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSVPSTVG 377
R PP S P M S R S S L PP+ P S VPS
Sbjct: 2406 RSRTPP-----SAPSQSRMTSERAPSPSSRMGQAPSQSLLPPA----QDQPRSPVPSAFS 2456
Query: 378 ----CSSQHTPDQANSDRASIGRRRTELRRSG------SSRSPGSKARAEGRGPVT---- 423
C T A S S G T +G S +PG G P +
Sbjct: 2457 DQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQ 2516
Query: 424 -PLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSA 482
P L Q + SS + +S +S S + + ++S ++ + A
Sbjct: 2517 QPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEV-A 2575
Query: 483 MQSARGPTPSSPLPSV-----PVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGS 537
++ PTP+ P +V P PA R SS + S + S ++ S
Sbjct: 2576 LKRVPSPTPA-PKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2634
Query: 538 AKDGGPQPPDAPQLVSSAREGS---PEPWLPLTDGRSPRRSRDP 578
+ + S A+ G P+P P RRSR P
Sbjct: 2635 SSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSP 2678
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 41.2 bits (95), Expect = 0.003
Identities = 57/217 (26%), Positives = 73/217 (33%), Gaps = 46/217 (21%)
Query: 320 GAPPLPGAESFPGSQ---VMGSGRGSLSSGGQTSWDSG-CLAPPSTRTSHSLPE--SSVP 373
GA P PG PG ++G G S G G PPS SH +P S+
Sbjct: 8 GAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSV--SHPMPTMGSTDF 65
Query: 374 STVGCSSQHTPDQANSDRASIGRRRTELRRSGSSRSPGSKARAEGRGPVTPLHLDLTQLH 433
G H P D+ + E GS + G + G GP
Sbjct: 66 PQEGMHQMHKPIDGIHDKGIV-----EDIHCGSMKGTGMRPPHPGMGP------------ 108
Query: 434 RLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAMQSARGPTPSS 493
P +P HS Y P+ P G E +S+ S GPTP
Sbjct: 109 -------PQSP----MDQHSQGYMSPHPSPL----------GAPEHVSSPMSGGGPTPPQ 147
Query: 494 PLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRA 530
PS P ++ DP++ S GP S Q RA
Sbjct: 148 MPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLHQLRA 184
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 41.2 bits (95), Expect = 0.003
Identities = 57/217 (26%), Positives = 73/217 (33%), Gaps = 46/217 (21%)
Query: 320 GAPPLPGAESFPGSQ---VMGSGRGSLSSGGQTSWDSG-CLAPPSTRTSHSLPE--SSVP 373
GA P PG PG ++G G S G G PPS SH +P S+
Sbjct: 8 GAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSV--SHPMPTMGSTDF 65
Query: 374 STVGCSSQHTPDQANSDRASIGRRRTELRRSGSSRSPGSKARAEGRGPVTPLHLDLTQLH 433
G H P D+ + E GS + G + G GP
Sbjct: 66 PQEGMHQMHKPIDGIHDKGIV-----EDIHCGSMKGTGMRPPHPGMGP------------ 108
Query: 434 RLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEEFLSAMQSARGPTPSS 493
P +P HS Y P+ P G E +S+ S GPTP
Sbjct: 109 -------PQSP----MDQHSQGYMSPHPSPL----------GAPEHVSSPMSGGGPTPPQ 147
Query: 494 PLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRA 530
PS P ++ DP++ S GP S Q RA
Sbjct: 148 MPPSQPGALIPGDPQAMSQPNRGPSPFSPVQLHQLRA 184
>gi|148806908 fibronectin type III domain containing 1 [Homo sapiens]
Length = 1894
Score = 41.2 bits (95), Expect = 0.003
Identities = 88/335 (26%), Positives = 120/335 (35%), Gaps = 69/335 (20%)
Query: 314 AVTHREGAPPLPGAESFPGSQVMGSGR-GSLSSGGQTSWDSGCLAPPSTRTSHSLPESSV 372
A HR+ P+P G+ G+ SL+S Q S T P++
Sbjct: 917 ASLHRK--EPIPENPKSTGADTHPQGKYSSLASKAQDVQQS-----TDADTEGHSPKAQP 969
Query: 373 PSTVGCSSQHTPDQANSDR-ASIGRRRTELRR---------SGSSRSPGSKARAEGRGPV 422
ST +S P A S + S+ RR T R + S PG ++R GR P
Sbjct: 970 GSTDRHASPARPPAARSQQHPSVPRRMTPGRAPQQQPPPPVATSQHHPGPQSRDAGRSPS 1029
Query: 423 TPLHLDLTQLHRLSLESSPDAPDHTSE-TSHSPLYADPYTP------PATSHRRVTDVRG 475
P L LTQ R P TS+ SHS +DPYT P + D +G
Sbjct: 1030 QP-RLSLTQAGR---------PRPTSQGRSHSS--SDPYTASSRGMLPTALQNQDEDAQG 1077
Query: 476 LEEFLSA---MQSARGPTPSSPLPSVPVSVP-------------ASDPRSCSSGPAGPYL 519
+ S Q R P ++ S+P D RS A P
Sbjct: 1078 SYDDDSTEVEAQDVRAPAHAARAKEAAASLPKHQQVESPTGAGAGGDHRSQRGHAASPAR 1137
Query: 520 LSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSRDPG 579
S+ G QSRA R A G +PP L S +++ + D G
Sbjct: 1138 PSRPGGPQSRA--RVPSRAAPGKSEPPSKRPLSSKSQQ---------SVSAEDDEEEDAG 1186
Query: 580 -YDHLWDETLSSSHQKCPQ----LGGPEASGGLVQ 609
+ ++ LSSS K P GG +A G L +
Sbjct: 1187 FFKGGKEDLLSSSVPKWPSSSTPRGGKDADGSLAK 1221
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 40.4 bits (93), Expect = 0.005
Identities = 66/279 (23%), Positives = 92/279 (32%), Gaps = 53/279 (18%)
Query: 312 LRAVTHREGAPPLPGAES----------FPGSQVMGSGRGSLSSGGQTSWDSGCLAPP-- 359
+++ H G+PP+PG FPG++ G GS+ +S PP
Sbjct: 194 IQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLP 253
Query: 360 --STRTSHSLPESSVPSTVGCSSQHT------PDQANSDRASIGRRRTELRRSGSSRSPG 411
+R P P S H P Q N R + ++ P
Sbjct: 254 PTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPP 313
Query: 412 SKARAEGRGPVTPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVT 471
S+ P + + + +L + +L S P S PL PP S R
Sbjct: 314 SRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPL------PPPPSERPPP 367
Query: 472 DVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSG-PAGPYLLSKKGALQSRA 530
VR P S PLP P P S S S PA P L S+ G R+
Sbjct: 368 PVRD------------PPGRSGPLPPPP---PVSRNGSTSRALPATPQLPSRSGVDSPRS 412
Query: 531 AQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDG 569
GP+PP P S+ P P + +G
Sbjct: 413 -----------GPRPPLPPDRPSAGAPPPPPPSTSIRNG 440
Score = 30.4 bits (67), Expect = 5.0
Identities = 75/286 (26%), Positives = 98/286 (34%), Gaps = 43/286 (15%)
Query: 312 LRAVTHREG-----APPL--PGAESF---PGSQVMGSGRGSLSSGGQTSWD---SGCLAP 358
LR+ +R+ PPL PG S P S G GR + S G S P
Sbjct: 111 LRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMP 170
Query: 359 PSTRTSHSLPES---SVPSTVGCSSQHTPDQANSDRASIGRRRTELRRSGSSRSPGSKAR 415
P S P+S VPST Q +P S G R+ + PG++
Sbjct: 171 PPRPDVGSKPDSIPPPVPSTPR-PIQSSPHNRGSPPVPGGPRQPSPGPTPPP-FPGNRGT 228
Query: 416 AEGRGPV--TPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDV 473
A G G + +PL +R L P P + P PP +R
Sbjct: 229 ALGGGSIRQSPLSSSSPFSNRPPL---PPTPSRALDDKPPP------PPPPVGNRPSIHR 279
Query: 474 RGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQS-RAAQ 532
+ Q+ + P PS+P PS P P GP P S G ++ R Q
Sbjct: 280 EAVPP--PPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPP-PLPPSSSGNDETPRLPQ 336
Query: 533 RHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSRDP 578
R+ + P L S R G P P R P RDP
Sbjct: 337 RNLSLSS-------STPPLPSPGRSG---PLPPPPSERPPPPVRDP 372
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 40.4 bits (93), Expect = 0.005
Identities = 66/279 (23%), Positives = 92/279 (32%), Gaps = 53/279 (18%)
Query: 312 LRAVTHREGAPPLPGAES----------FPGSQVMGSGRGSLSSGGQTSWDSGCLAPP-- 359
+++ H G+PP+PG FPG++ G GS+ +S PP
Sbjct: 194 IQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLP 253
Query: 360 --STRTSHSLPESSVPSTVGCSSQHT------PDQANSDRASIGRRRTELRRSGSSRSPG 411
+R P P S H P Q N R + ++ P
Sbjct: 254 PTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPP 313
Query: 412 SKARAEGRGPVTPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVT 471
S+ P + + + +L + +L S P S PL PP S R
Sbjct: 314 SRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPL------PPPPSERPPP 367
Query: 472 DVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSG-PAGPYLLSKKGALQSRA 530
VR P S PLP P P S S S PA P L S+ G R+
Sbjct: 368 PVRD------------PPGRSGPLPPPP---PVSRNGSTSRALPATPQLPSRSGVDSPRS 412
Query: 531 AQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDG 569
GP+PP P S+ P P + +G
Sbjct: 413 -----------GPRPPLPPDRPSAGAPPPPPPSTSIRNG 440
Score = 30.4 bits (67), Expect = 5.0
Identities = 75/286 (26%), Positives = 98/286 (34%), Gaps = 43/286 (15%)
Query: 312 LRAVTHREG-----APPL--PGAESF---PGSQVMGSGRGSLSSGGQTSWD---SGCLAP 358
LR+ +R+ PPL PG S P S G GR + S G S P
Sbjct: 111 LRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMP 170
Query: 359 PSTRTSHSLPES---SVPSTVGCSSQHTPDQANSDRASIGRRRTELRRSGSSRSPGSKAR 415
P S P+S VPST Q +P S G R+ + PG++
Sbjct: 171 PPRPDVGSKPDSIPPPVPSTPR-PIQSSPHNRGSPPVPGGPRQPSPGPTPPP-FPGNRGT 228
Query: 416 AEGRGPV--TPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDV 473
A G G + +PL +R L P P + P PP +R
Sbjct: 229 ALGGGSIRQSPLSSSSPFSNRPPL---PPTPSRALDDKPPP------PPPPVGNRPSIHR 279
Query: 474 RGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQS-RAAQ 532
+ Q+ + P PS+P PS P P GP P S G ++ R Q
Sbjct: 280 EAVPP--PPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPP-PLPPSSSGNDETPRLPQ 336
Query: 533 RHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSRDP 578
R+ + P L S R G P P R P RDP
Sbjct: 337 RNLSLSS-------STPPLPSPGRSG---PLPPPPSERPPPPVRDP 372
>gi|209862845 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 1 [Homo sapiens]
Length = 964
Score = 39.7 bits (91), Expect = 0.008
Identities = 31/78 (39%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 487 RGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRA-AQRHRGSAKDGGPQP 545
RGP S L S P PAS PR S P G S G S + A RGS + G +P
Sbjct: 304 RGPEDSWLLLSAPGPTPAS-PRPAS--PCGKRRYSSSGTPSSASPALSRRGSLGEEGSEP 360
Query: 546 PDAPQLVSSAREGSPEPW 563
P P L + GSP P+
Sbjct: 361 PPPPPLPLARDPGSPGPF 378
>gi|27886563 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 2 [Homo sapiens]
Length = 902
Score = 39.7 bits (91), Expect = 0.008
Identities = 31/78 (39%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 487 RGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRA-AQRHRGSAKDGGPQP 545
RGP S L S P PAS PR S P G S G S + A RGS + G +P
Sbjct: 241 RGPEDSWLLLSAPGPTPAS-PRPAS--PCGKRRYSSSGTPSSASPALSRRGSLGEEGSEP 297
Query: 546 PDAPQLVSSAREGSPEPW 563
P P L + GSP P+
Sbjct: 298 PPPPPLPLARDPGSPGPF 315
>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
sapiens]
Length = 1309
Score = 39.7 bits (91), Expect = 0.008
Identities = 42/138 (30%), Positives = 54/138 (39%), Gaps = 34/138 (24%)
Query: 475 GLEEFLSAMQSARG-------PTPS----SPLPSVPVSVPASDPRSC--SSGPAGPYLLS 521
GL LS+ +S G P+P+ SP P VP AS P + SS PA P
Sbjct: 1095 GLHHSLSSSESLPGSPTHSLSPSPTTPCRSPAPDVPADTTASPPSASPSSSSPASP---- 1150
Query: 522 KKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSSA----------------REGSPEPWLP 565
A +R + H +AK G P+P + +S+ R SP P P
Sbjct: 1151 -AAAGHTRPSSLHGLAAKLGPPRPKTGRRKSTSSIPPSPLACPPISAPPPRSPSPLPGHP 1209
Query: 566 LTDGRSPRRSRDPGYDHL 583
RSPR R D L
Sbjct: 1210 PAPARSPRLRRGQSADKL 1227
>gi|33636717 hypothetical protein LOC80256 [Homo sapiens]
Length = 538
Score = 39.7 bits (91), Expect = 0.008
Identities = 60/237 (25%), Positives = 77/237 (32%), Gaps = 83/237 (35%)
Query: 318 REGAPPL-PGAESFPGSQVMGSGRGSLS--------------SGGQTSWDSGCLAPPSTR 362
REG PP P G + G G G S S +SW SG +PP
Sbjct: 88 REGLPPEEPSTVGLLGPEGPGLGLGVASQHFSHRGLCVVEQRSSVTSSWTSGAWSPPCP- 146
Query: 363 TSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTELRRSGSSRSPGSKARAEGRGPV 422
PS C++ HT D A+ D GS + G P
Sbjct: 147 ----------PSNASCNTLHTRDWASPDPGG----------------QGSLGESPGPAPP 180
Query: 423 TPLHLDLTQLHRLSL--ESSPDA---------PDHTSETS--HSPLYADPYTPPATSHRR 469
LH T LH L+ SP A P + T+ HSP +TPP
Sbjct: 181 GQLHTLDTDLHSLAQIGGKSPVAGVGNGGSLWPRESPGTANGHSP----EHTPP------ 230
Query: 470 VTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKKGAL 526
GP P P P+ +PA + SS GP ++G+L
Sbjct: 231 ------------------GPGPPGPCPTKRRLLPAGEAPDVSSEEEGPAPRRRRGSL 269
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 39.3 bits (90), Expect = 0.011
Identities = 41/158 (25%), Positives = 59/158 (37%), Gaps = 6/158 (3%)
Query: 363 TSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTEL-RRSGSSRSPGSKARAEGRGP 421
T+ L E S +S T A A +G T SGS+ + S AR+ G
Sbjct: 1349 TTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTKLSPARSTTSGL 1408
Query: 422 V---TPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEE 478
V TP L + +L SP P + ++ + Y P +P AT T G+ E
Sbjct: 1409 VGESTPSRLSPSSTETTTLPGSPTTPSLSEKS--TTFYTSPRSPDATLSPATTTSSGVSE 1466
Query: 479 FLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAG 516
S S G T ++ P + S + S G
Sbjct: 1467 ESSTSHSQPGSTHTTAFPDSTTTSDLSQEPTTSHSSQG 1504
Score = 39.3 bits (90), Expect = 0.011
Identities = 41/158 (25%), Positives = 59/158 (37%), Gaps = 6/158 (3%)
Query: 363 TSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTEL-RRSGSSRSPGSKARAEGRGP 421
T+ L E S +S T A A +G T SGS+ + S AR+ G
Sbjct: 2906 TTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTTLSPARSTTSGL 2965
Query: 422 V---TPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEE 478
V TP L + +L SP P + ++ + Y P +P AT T G+ E
Sbjct: 2966 VGESTPSRLSPSSTETTTLPGSPTTPSLSEKS--TTFYTSPRSPDATLSPATTTSSGVSE 3023
Query: 479 FLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAG 516
S S G T ++ P + S + S G
Sbjct: 3024 ESSTSHSQPGSTHTTAFPDSTTTSGLSQEPTASHSSQG 3061
Score = 38.9 bits (89), Expect = 0.014
Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 7/155 (4%)
Query: 363 TSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTEL-RRSGSSRSPGSKARAEGRGP 421
T+ L E S +S T A A +G T SGS+ + S AR+ G
Sbjct: 3989 TTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTKLSPARSTTSGL 4048
Query: 422 V---TPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEE 478
V TP L + +L SP P + ++ + Y P +P AT T G+ E
Sbjct: 4049 VGESTPSRLSPSSTETTTLPGSPTTPSLSEKS--TTFYTSPRSPDATLSPATTTSSGVSE 4106
Query: 479 FLSAMQSARGPTPSSPLP-SVPVSVPASDPRSCSS 512
S S G T ++ P S S + +P + S
Sbjct: 4107 ESSTSHSQPGSTHTTAFPDSTTTSGLSQEPTTSHS 4141
Score = 38.5 bits (88), Expect = 0.018
Identities = 38/138 (27%), Positives = 54/138 (39%), Gaps = 6/138 (4%)
Query: 363 TSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTEL-RRSGSSRSPGSKARAEGRGP 421
T+ L E S +S T A A +G T SGS+ + S AR+ G
Sbjct: 2432 TTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTTLSPARSTTSGL 2491
Query: 422 V---TPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEE 478
V TP L + +L SP P + ++ + Y P +P AT T G+ E
Sbjct: 2492 VGESTPSRLSPSSTETTTLPGSPTTPSLSEKS--TTFYTSPRSPDATLSPATTTSSGVSE 2549
Query: 479 FLSAMQSARGPTPSSPLP 496
S S G T ++ P
Sbjct: 2550 ESSTSHSQPGSTHTTAFP 2567
Score = 32.3 bits (72), Expect = 1.3
Identities = 60/240 (25%), Positives = 88/240 (36%), Gaps = 27/240 (11%)
Query: 358 PPSTRTSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTELRRSGSSRSPGSKARAE 417
P S+ TS +S++ + +S TP A+S + G T S SPGS
Sbjct: 1177 PASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGRGESTT------SRISPGSTEITT 1230
Query: 418 GRGPVTPLHLDLTQLHRLSLESSPDAPDHT-SETSHSPL-----YADPYTPPATSHRRV- 470
G T L + SSP +P T S S + L + P ++H V
Sbjct: 1231 LPGSTTTPGLSEAS---TTFYSSPRSPTTTLSPASMTSLGVGEESTTSRSQPGSTHSTVS 1287
Query: 471 ---TDVRGL-EEFLSAMQSARGPTPSSPLP-SVPVSVPASDPRSCSSGPAGPY-LLSKKG 524
T GL EE + S+RG T ++ P S SV +P + S PA + L +
Sbjct: 1288 PASTTTPGLSEESTTVYSSSRGSTETTVFPHSTTTSVHGEEPTTFHSRPASTHTTLFTED 1347
Query: 525 ALQSRAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGR-----SPRRSRDPG 579
+ S + P +++A G P + G SP RS G
Sbjct: 1348 STTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTKLSPARSTTSG 1407
Score = 30.8 bits (68), Expect = 3.8
Identities = 59/240 (24%), Positives = 87/240 (36%), Gaps = 27/240 (11%)
Query: 358 PPSTRTSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTELRRSGSSRSPGSKARAE 417
P S+ TS +S++ + +S TP A+S + G T S SPGS
Sbjct: 2260 PASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGRGESTT------SRISPGSTEITT 2313
Query: 418 GRGPVTPLHLDLTQLHRLSLESSPDAPDHT-SETSHSPL-----YADPYTPPATSHRRV- 470
G T L + SSP +P T S S + L + P ++H V
Sbjct: 2314 LPGSTTTPGLSEAS---TTFYSSPRSPTTTLSPASMTSLGVGEESTTSRSQPGSTHSTVS 2370
Query: 471 ---TDVRGL-EEFLSAMQSARGPTPSSPLPSVP-VSVPASDPRSCSSGPAGPY-LLSKKG 524
T GL EE + S+ G T ++ P P SV +P + S PA + L +
Sbjct: 2371 PASTTTPGLSEESTTVYSSSPGSTETTVFPRTPTTSVRGEEPTTFHSRPASTHTTLFTED 2430
Query: 525 ALQSRAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGR-----SPRRSRDPG 579
+ S + P +++A G P + G SP RS G
Sbjct: 2431 STTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTTLSPARSTTSG 2490
Score = 29.6 bits (65), Expect = 8.5
Identities = 59/240 (24%), Positives = 87/240 (36%), Gaps = 27/240 (11%)
Query: 358 PPSTRTSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTELRRSGSSRSPGSKARAE 417
P S+ TS +S++ + +S TP A+S + G T S SPGS
Sbjct: 2734 PASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGRGESTT------SRISPGSTEITT 2787
Query: 418 GRGPVTPLHLDLTQLHRLSLESSPDAPDHT-SETSHSPL-----YADPYTPPATSHRRV- 470
G T L + SSP +P T S S + L + P ++H V
Sbjct: 2788 LPGSTTTPGLSEAS---TTFYSSPRSPTTTLSPASMTSLGVGEESTTSRSQPGSTHSTVS 2844
Query: 471 ---TDVRGL-EEFLSAMQSARGPTPSSPLP-SVPVSVPASDPRSCSSGPAGPY-LLSKKG 524
T GL EE + S+ G T ++ P S SV +P + S PA + L +
Sbjct: 2845 PASTTTPGLSEESTTVYSSSPGSTETTVFPRSTTTSVRGEEPTTFHSRPASTHTTLFTED 2904
Query: 525 ALQSRAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGR-----SPRRSRDPG 579
+ S + P +++A G P + G SP RS G
Sbjct: 2905 STTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTTLSPARSTTSG 2964
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 39.3 bits (90), Expect = 0.011
Identities = 41/158 (25%), Positives = 59/158 (37%), Gaps = 6/158 (3%)
Query: 363 TSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTEL-RRSGSSRSPGSKARAEGRGP 421
T+ L E S +S T A A +G T SGS+ + S AR+ G
Sbjct: 836 TTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTKLSPARSTTSGL 895
Query: 422 V---TPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPPATSHRRVTDVRGLEE 478
V TP L + +L SP P + ++ + Y P +P AT T G+ E
Sbjct: 896 VGESTPSRLSPSSTETTTLPGSPTTPSLSEKS--TTFYTSPRSPDATLSPATTTSSGVSE 953
Query: 479 FLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAG 516
S S G T ++ P + S + S G
Sbjct: 954 ESSTSHSQPGSTHTTAFPDSTTTSDLSQEPTTSHSSQG 991
Score = 32.3 bits (72), Expect = 1.3
Identities = 60/240 (25%), Positives = 88/240 (36%), Gaps = 27/240 (11%)
Query: 358 PPSTRTSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTELRRSGSSRSPGSKARAE 417
P S+ TS +S++ + +S TP A+S + G T S SPGS
Sbjct: 664 PASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGRGESTT------SRISPGSTEITT 717
Query: 418 GRGPVTPLHLDLTQLHRLSLESSPDAPDHT-SETSHSPL-----YADPYTPPATSHRRV- 470
G T L + SSP +P T S S + L + P ++H V
Sbjct: 718 LPGSTTTPGLSEAS---TTFYSSPRSPTTTLSPASMTSLGVGEESTTSRSQPGSTHSTVS 774
Query: 471 ---TDVRGL-EEFLSAMQSARGPTPSSPLP-SVPVSVPASDPRSCSSGPAGPY-LLSKKG 524
T GL EE + S+RG T ++ P S SV +P + S PA + L +
Sbjct: 775 PASTTTPGLSEESTTVYSSSRGSTETTVFPHSTTTSVHGEEPTTFHSRPASTHTTLFTED 834
Query: 525 ALQSRAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGR-----SPRRSRDPG 579
+ S + P +++A G P + G SP RS G
Sbjct: 835 STTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTKLSPARSTTSG 894
>gi|38176151 Lunapark [Homo sapiens]
Length = 428
Score = 39.3 bits (90), Expect = 0.011
Identities = 28/74 (37%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Query: 481 SAMQSARGPTPSSPLPSVPVSVPASD-PRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAK 539
+A Q PTP+SP P VP S P SS P GP + AL S RH GS
Sbjct: 170 TAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPA 229
Query: 540 DGGP----QPPDAP 549
P PP P
Sbjct: 230 TSVPGMGLHPPGPP 243
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 39.3 bits (90), Expect = 0.011
Identities = 67/279 (24%), Positives = 93/279 (33%), Gaps = 19/279 (6%)
Query: 322 PPLPGAESFPGSQVMGSGRGSLSSGGQTSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQ 381
PP P PG GS R S S SG + T T + P++ G +
Sbjct: 551 PPNPANSWVPGLSPGGSRRPPRSPERTLSPSSGYSSQSGTPTLPPKGLAGPPASPGKAQP 610
Query: 382 HTPDQANSDR---ASIGRRRTELRRSGSSRSPGSKARAEGRGPVTPLHLDLTQLHRLSLE 438
P++ S R AS+ T L S S +P ++ G +TPL R +
Sbjct: 611 PKPERVTSLRSPGASVSSSLTSLCSSSSDPAPSDRS---GPQILTPLG------DRFVIP 661
Query: 439 SSPDAPDHTSETSHSPLYADPYTP----PATSHRRVTDVRGLEEFLSAMQSARGPTPSSP 494
P P S P +P P PA V+ + Q+ P SP
Sbjct: 662 PHPKVPAPFSPPPSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPPTPQTTLTPLQESP 721
Query: 495 LPSVPVSVPASDPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGG--PQPPDAPQLV 552
+ S S P S P S P P + A++ +D P PP AP+
Sbjct: 722 VISKDQSPPPSPPPSYHP-PPPPTKKPEVVVEAPSASETAEEPLQDPNWPPPPPPAPEEQ 780
Query: 553 SSAREGSPEPWLPLTDGRSPRRSRDPGYDHLWDETLSSS 591
+ P P SP + G L +SS
Sbjct: 781 DLSMADFPPPEEAFFSVASPEPAGPSGSPELVSSPAASS 819
>gi|153266778 arg tyrosine kinase isoform c [Homo sapiens]
Length = 1167
Score = 38.9 bits (89), Expect = 0.014
Identities = 55/223 (24%), Positives = 85/223 (38%), Gaps = 34/223 (15%)
Query: 314 AVTHREGAPP---LPGAESFP-GSQVMGSGR----GSLSSGGQTSWDSGCLAPPSTRTSH 365
A+T ++ PP + G + P G + G R G G Q W S A P T+H
Sbjct: 855 AITEKD--PPGVGVAGVAAAPKGKEKNGGARLGMAGVPEDGEQPGWPSPAKAAPVLPTTH 912
Query: 366 SLPESSVPSTVGCSSQHTPDQANSDRASIGRRRTELRRSGSSRSPGSKARAEGRGPVTPL 425
+ VP + + +HTP +D IG + S G+K + VT
Sbjct: 913 N---HKVPVLISPTLKHTP----ADVQLIG-----------TDSQGNKFKLLSEHQVTSS 954
Query: 426 HLDLTQLHRLSLESSPDAPDHTSETSHSPLYADPYTPP----ATSHRRVTDVRGLEEFLS 481
D + R+ + +P P H + +DP P A T G + L
Sbjct: 955 G-DKDRPRRVKPKCAPPPPPVMRLLQHPSICSDPTEEPTALTAGQSTSETQEGGKKAALG 1013
Query: 482 AMQ-SARGPTPSSPLPSVPVSVPASDPRSCSSGPAGPYLLSKK 523
A+ S + P P P VP+ + P ++G AG + +K
Sbjct: 1014 AVPISGKAGRPVMPPPQVPLPTSSISPAKMANGTAGTKVALRK 1056
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,768,890
Number of Sequences: 37866
Number of extensions: 1675066
Number of successful extensions: 9803
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 457
Number of HSP's that attempted gapping in prelim test: 8942
Number of HSP's gapped (non-prelim): 1261
length of query: 611
length of database: 18,247,518
effective HSP length: 108
effective length of query: 503
effective length of database: 14,157,990
effective search space: 7121468970
effective search space used: 7121468970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.