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Name: KCNQ2 Sequence: fasta or formatted (844aa) NCBI GI: 26051260
Description:

potassium voltage-gated channel KQT-like protein 2 isoform c

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [854aa] potassium voltage-gated channel KQT-like protein 2 isoform b
alt prot [872aa] potassium voltage-gated channel KQT-like protein 2 isoform a
alt prot [841aa] potassium voltage-gated channel KQT-like protein 2 isoform d
alt prot [393aa] potassium voltage-gated channel KQT-like protein 2 isoform e
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         67           2
 C cysteine            1.9         16           3
 D aspartate           4.6         39           2
 E glutamate           5.5         46           2
 F phenylalanine       4.3         36           2
 G glycine             8.4         71           3
 H histidine           1.8         15           1
 I isoleucine          4.5         38           1
 K lysine              5.7         48           2
 L leucine             8.4         71           2
 M methionine          1.7         14           2
 N asparagine          2.1         18           1
 P proline             7.8         66           4
 Q glutamine           3.4         29           1
 R arginine            7.5         63           2
 S serine              9.5         80           4
 T threonine           3.9         33           2
 V valine              6.4         54           2
 W tryptophan          1.5         13           2
 Y tyrosine            3.2         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium voltage-gated channel KQT-like protein 2 i... 
KCNQ2                 0.995   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ2                 0.989   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ2                 0.973   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ2                 0.435   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ5                 0.389   potassium voltage-gated channel, KQT-like subfamily,...
KCNQ5                 0.385   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.385   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.382   potassium voltage-gated channel, KQT-like subfamily...
KCNQ4                 0.382   potassium voltage-gated channel KQT-like protein 4 i...
KCNQ3                 0.381   potassium voltage-gated channel KQT-like protein 3 [H...
KCNQ4                 0.378   potassium voltage-gated channel KQT-like protein 4 i...
KCNQ5                 0.264   potassium voltage-gated channel, KQT-like subfamily...
KCNQ1                 0.225   potassium voltage-gated channel, KQT-like subfamily,...
KCNQ1                 0.209   potassium voltage-gated channel, KQT-like subfamily,...
KCNC2                 0.047   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.047   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.047   Shaw-related voltage-gated potassium channel protein...
KCNA1                 0.041   potassium voltage-gated channel subfamily A member ...
KCNA3                 0.041   potassium voltage-gated channel, shaker-related subf...
KCNA4                 0.041   potassium voltage-gated channel, shaker-related subfa...
KCNB1                 0.040   potassium voltage-gated channel, Shab-related subfami...
KCNB2                 0.040   potassium voltage-gated channel, Shab-related subfam...
KCNC1                 0.039   Shaw-related voltage-gated potassium channel protein ...
KCNC1                 0.039   Shaw-related voltage-gated potassium channel protei...
KCNC4                 0.038   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.038   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.038   Shaw-related voltage-gated potassium channel protein...
KCNA6                 0.038   potassium voltage-gated channel, shaker-related subfa...
KCNA2                 0.038   potassium voltage-gated channel, shaker-related subfa...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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