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Name: KCNQ2 Sequence: fasta or formatted (393aa) NCBI GI: 26051268
Description:

potassium voltage-gated channel KQT-like protein 2 isoform e

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [844aa] potassium voltage-gated channel KQT-like protein 2 isoform c
alt prot [854aa] potassium voltage-gated channel KQT-like protein 2 isoform b
alt prot [872aa] potassium voltage-gated channel KQT-like protein 2 isoform a
alt prot [841aa] potassium voltage-gated channel KQT-like protein 2 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         37           2
 C cysteine            1.8          7           3
 D aspartate           2.5         10           1
 E glutamate           3.6         14           1
 F phenylalanine       6.4         25           2
 G glycine             9.2         36           2
 H histidine           1.8          7           1
 I isoleucine          5.6         22           1
 K lysine              5.3         21           2
 L leucine            10.9         43           2
 M methionine          1.3          5           1
 N asparagine          2.3          9           1
 P proline             3.8         15           2
 Q glutamine           2.8         11           1
 R arginine            7.9         31           3
 S serine              6.4         25           2
 T threonine           4.8         19           2
 V valine              6.6         26           2
 W tryptophan          2.5         10           2
 Y tyrosine            5.1         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium voltage-gated channel KQT-like protein 2 i... 
KCNQ2                 0.947   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ2                 0.945   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ2                 0.945   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ2                 0.945   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ4                 0.588   potassium voltage-gated channel KQT-like protein 4 i...
KCNQ4                 0.588   potassium voltage-gated channel KQT-like protein 4 i...
KCNQ5                 0.577   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.575   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.575   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.575   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.575   potassium voltage-gated channel, KQT-like subfamily,...
KCNQ3                 0.562   potassium voltage-gated channel KQT-like protein 3 [H...
KCNQ1                 0.412   potassium voltage-gated channel, KQT-like subfamily,...
KCNQ1                 0.380   potassium voltage-gated channel, KQT-like subfamily,...
KCNC2                 0.102   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.102   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.102   Shaw-related voltage-gated potassium channel protein...
KCNA1                 0.090   potassium voltage-gated channel subfamily A member ...
KCNA3                 0.089   potassium voltage-gated channel, shaker-related subf...
KCNA4                 0.089   potassium voltage-gated channel, shaker-related subfa...
KCNB1                 0.086   potassium voltage-gated channel, Shab-related subfami...
KCNB2                 0.086   potassium voltage-gated channel, Shab-related subfam...
KCNC1                 0.085   Shaw-related voltage-gated potassium channel protein ...
KCNC1                 0.085   Shaw-related voltage-gated potassium channel protei...
KCNC4                 0.084   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.084   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.084   Shaw-related voltage-gated potassium channel protein...
KCNA6                 0.082   potassium voltage-gated channel, shaker-related subfa...
KCNA2                 0.082   potassium voltage-gated channel, shaker-related subfa...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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