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Name: KCNQ2 Sequence: fasta or formatted (854aa) NCBI GI: 26051262
Description:

potassium voltage-gated channel KQT-like protein 2 isoform b

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [844aa] potassium voltage-gated channel KQT-like protein 2 isoform c
alt prot [872aa] potassium voltage-gated channel KQT-like protein 2 isoform a
alt prot [841aa] potassium voltage-gated channel KQT-like protein 2 isoform d
alt prot [393aa] potassium voltage-gated channel KQT-like protein 2 isoform e
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         68           2
 C cysteine            1.9         16           3
 D aspartate           4.6         39           2
 E glutamate           5.4         46           2
 F phenylalanine       4.2         36           2
 G glycine             8.4         72           3
 H histidine           1.8         15           1
 I isoleucine          4.4         38           1
 K lysine              5.6         48           2
 L leucine             8.3         71           2
 M methionine          1.6         14           2
 N asparagine          2.1         18           1
 P proline             7.7         66           4
 Q glutamine           3.6         31           1
 R arginine            7.4         63           2
 S serine              9.7         83           4
 T threonine           4.1         35           2
 V valine              6.3         54           2
 W tryptophan          1.5         13           2
 Y tyrosine            3.3         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium voltage-gated channel KQT-like protein 2 i... 
KCNQ2                 0.994   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ2                 0.984   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ2                 0.978   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ2                 0.429   potassium voltage-gated channel KQT-like protein 2 i...
KCNQ5                 0.382   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.382   potassium voltage-gated channel, KQT-like subfamily,...
KCNQ5                 0.380   potassium voltage-gated channel, KQT-like subfamily...
KCNQ5                 0.376   potassium voltage-gated channel, KQT-like subfamily...
KCNQ4                 0.376   potassium voltage-gated channel KQT-like protein 4 i...
KCNQ3                 0.374   potassium voltage-gated channel KQT-like protein 3 [H...
KCNQ4                 0.372   potassium voltage-gated channel KQT-like protein 4 i...
KCNQ5                 0.262   potassium voltage-gated channel, KQT-like subfamily...
KCNQ1                 0.219   potassium voltage-gated channel, KQT-like subfamily,...
KCNQ1                 0.205   potassium voltage-gated channel, KQT-like subfamily,...
KCNC2                 0.046   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.046   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.046   Shaw-related voltage-gated potassium channel protein...
KCNA1                 0.041   potassium voltage-gated channel subfamily A member ...
KCNA3                 0.040   potassium voltage-gated channel, shaker-related subf...
KCNA4                 0.040   potassium voltage-gated channel, shaker-related subfa...
KCNB1                 0.039   potassium voltage-gated channel, Shab-related subfami...
KCNC1                 0.039   Shaw-related voltage-gated potassium channel protei...
KCNB2                 0.039   potassium voltage-gated channel, Shab-related subfam...
KCNC1                 0.039   Shaw-related voltage-gated potassium channel protein ...
KCND3                 0.039   potassium voltage-gated channel, Shal-related subfam...
KCNC4                 0.038   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.038   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.038   Shaw-related voltage-gated potassium channel protein...
KCNA6                 0.037   potassium voltage-gated channel, shaker-related subfa...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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