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Search of human proteins with 23397498
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23397498 transmembrane protein 92 [Homo sapiens]
(159 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23397498 transmembrane protein 92 [Homo sapiens] 343 4e-95
gi|41152235 ubiquitin specific protease 51 [Homo sapiens] 39 0.002
gi|157785645 SPEG complex locus [Homo sapiens] 37 0.009
gi|110349719 titin isoform N2-A [Homo sapiens] 36 0.012
gi|21703710 scotin [Homo sapiens] 36 0.012
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.027
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.027
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 35 0.027
gi|146134388 YLP motif containing 1 [Homo sapiens] 35 0.027
gi|119120861 formin-like 3 isoform 2 [Homo sapiens] 35 0.035
gi|119120874 formin-like 3 isoform 1 [Homo sapiens] 35 0.035
gi|157168329 formin 1 [Homo sapiens] 34 0.046
gi|116174778 centrosome spindle pole associated protein 1 isofor... 34 0.046
gi|21389423 junctional sarcoplasmic reticulum protein 1 [Homo sa... 34 0.046
gi|116174789 centrosome spindle pole associated protein 1 isofor... 34 0.046
gi|213513324 hypothetical protein LOC401115 [Homo sapiens] 34 0.060
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 34 0.060
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 34 0.060
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 34 0.060
gi|153792074 proline rich 12 [Homo sapiens] 34 0.060
gi|126116581 retina and anterior neural fold homeobox [Homo sapi... 33 0.079
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 33 0.10
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 33 0.10
gi|5729962 submaxillary gland androgen regulated protein 3 homol... 33 0.10
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 33 0.13
gi|109689723 abl interactor 2 [Homo sapiens] 33 0.13
gi|20143482 melanoma antigen family E, 1 [Homo sapiens] 33 0.13
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 33 0.13
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 32 0.18
gi|153266778 arg tyrosine kinase isoform c [Homo sapiens] 32 0.18
>gi|23397498 transmembrane protein 92 [Homo sapiens]
Length = 159
Score = 343 bits (880), Expect = 4e-95
Identities = 159/159 (100%), Positives = 159/159 (100%)
Query: 1 MSQAWVPGLAPTLLFSLLAGPQKIAAKCGLILACPKGFKCCGDSCCQENELFPGPVRIFV 60
MSQAWVPGLAPTLLFSLLAGPQKIAAKCGLILACPKGFKCCGDSCCQENELFPGPVRIFV
Sbjct: 1 MSQAWVPGLAPTLLFSLLAGPQKIAAKCGLILACPKGFKCCGDSCCQENELFPGPVRIFV 60
Query: 61 IIFLVILSVFCICGLAKCFCRNCREPEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPY 120
IIFLVILSVFCICGLAKCFCRNCREPEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPY
Sbjct: 61 IIFLVILSVFCICGLAKCFCRNCREPEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPY 120
Query: 121 SEVILKPSLGPTPTEPPPPYSFRPEEYTGDQRGIDNPAF 159
SEVILKPSLGPTPTEPPPPYSFRPEEYTGDQRGIDNPAF
Sbjct: 121 SEVILKPSLGPTPTEPPPPYSFRPEEYTGDQRGIDNPAF 159
>gi|41152235 ubiquitin specific protease 51 [Homo sapiens]
Length = 711
Score = 38.5 bits (88), Expect = 0.002
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 95 RGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPPYSFRPEEYTGDQR 152
R P P R + LSAPPPP P+ P P PPPP + RP + G +R
Sbjct: 102 RKPRPRPQPRARSRSQPGLSAPPPP-------PARPPPPPPPPPPPAPRPRAWRGSRR 152
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 36.6 bits (83), Expect = 0.009
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 81 RNCREPEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILK-PSLGPTPTEPP 137
R R PD+P PL P+ P V VS S+PP P S+ + ++GP P PP
Sbjct: 2790 RPARARPPDSPTSLAPPLA-PAAPTPPSVTVSPSSPPTPPSQALSSLKAVGPPPQTPP 2846
Score = 30.0 bits (66), Expect = 0.87
Identities = 27/91 (29%), Positives = 32/91 (35%), Gaps = 38/91 (41%)
Query: 86 PEPDTPVDCRGPLELPSIIP----------------PERVRVSLSAPPP----------- 118
P+P TP PS P PE VR S APPP
Sbjct: 2184 PKPSTPKSAEPSATTPSDAPQPPAPQPAQDKAPEPRPEPVRASKPAPPPQALQTLALPLT 2243
Query: 119 PYSEVILK---------PSLGPT--PTEPPP 138
PY+++I PS GP P+EP P
Sbjct: 2244 PYAQIIQSLQLSGHAQGPSQGPAAPPSEPKP 2274
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 36.2 bits (82), Expect = 0.012
Identities = 26/59 (44%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 85 EPEPDTPVDCRGPLELPSIIPPERVRV--SLSAPPPPYSE---VILKPSLGPTPTEPPP 138
E EP+ P P E IIP ++V V APPP E VI KP L P P PPP
Sbjct: 10829 EEEPEVPPPAV-PEEPKKIIPEKKVPVIKKPEAPPPKEPEPEKVIEKPKLKPRPPPPPP 10886
Score = 30.8 bits (68), Expect = 0.51
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 22/82 (26%)
Query: 84 REPEPDTPVDCRGPLELPSII----------------PPERVRVSLSAPPPPYSEVILKP 127
R P P P+ P E+P ++ PP+R+ V+ A +V+ KP
Sbjct: 8941 RVPIPTMPIRAVPPEEIPPVVAPPIPLLLPTPEEKKPPPKRIEVTKKAVKKDAKKVVAKP 9000
Query: 128 SLGPTPTE-----PPPPYSFRP 144
TP E PPPP + P
Sbjct: 9001 K-EMTPREEIVKKPPPPTTLIP 9021
Score = 29.3 bits (64), Expect = 1.5
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 10/60 (16%)
Query: 87 EPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPPYSFRPEE 146
EP P P ++P ++PP+ V P PP K P P P P PE+
Sbjct: 10487 EPRVP-----PTKVPEVLPPKEVVPEKKVPVPP-----AKKPEAPPPKVPEAPKEVVPEK 10536
>gi|21703710 scotin [Homo sapiens]
Length = 240
Score = 36.2 bits (82), Expect = 0.012
Identities = 27/105 (25%), Positives = 38/105 (36%), Gaps = 19/105 (18%)
Query: 52 FPGPVRIFVIIFLVILSVFCICGLAKCFC--RNCREPEP-----DTPVDCRGPLELPSII 104
F + + + IF++ + IC C C + CR P P + P P +
Sbjct: 106 FGATLAVGLTIFVLSVVTIIICFTCSCCCLYKTCRRPRPVVTTTTSTTVVHAPYPQPPSV 165
Query: 105 PPERVRVSLSAPPPPYSEVILKP-----SLGPTPTEPPPPYSFRP 144
PP S P P Y P P P + PPPY +P
Sbjct: 166 PP-------SYPGPSYQGYHTMPPQPGMPAAPYPMQYPPPYPAQP 203
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 35.0 bits (79), Expect = 0.027
Identities = 24/64 (37%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
Query: 86 PEPDTPVDC-----RGPLELPSIIPPERVRVSLSAPP------PPYSEVILKPSLGPTPT 134
P P PV P PS PP + SL+APP PP S + PS P P
Sbjct: 442 PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPP-MSPSATPPPQ 500
Query: 135 EPPP 138
PPP
Sbjct: 501 APPP 504
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 35.0 bits (79), Expect = 0.027
Identities = 24/64 (37%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
Query: 86 PEPDTPVDC-----RGPLELPSIIPPERVRVSLSAPP------PPYSEVILKPSLGPTPT 134
P P PV P PS PP + SL+APP PP S + PS P P
Sbjct: 667 PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPP-MSPSATPPPQ 725
Query: 135 EPPP 138
PPP
Sbjct: 726 APPP 729
Score = 30.8 bits (68), Expect = 0.51
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Query: 88 PDTPVDCRGPLELPS---IIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPPYSFRP 144
P P C PL+ P PP S++ PPP + P L P+ P P + P
Sbjct: 561 PPCPAPC--PLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPP 618
Query: 145 EE 146
+
Sbjct: 619 PQ 620
Score = 29.3 bits (64), Expect = 1.5
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 9/53 (16%)
Query: 101 PSIIPPERVRVSLSAPP-----PPYSEVILKPSLGPTPTEPP----PPYSFRP 144
PS PP RV L+APP P + + + P P P PP PP P
Sbjct: 749 PSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALP 801
Score = 28.5 bits (62), Expect = 2.5
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Query: 101 PSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPP----PPYSFRP 144
P PP L PP P + + PS P P PP PP P
Sbjct: 723 PPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPP 770
Score = 27.3 bits (59), Expect = 5.6
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 91 PVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTE--PPPPYSF 142
P+ PL++P PP + +S A PPP + P+L P + P PP SF
Sbjct: 759 PLLAAPPLQVPP-SPPASLPMSPLAKPPPQA----PPALATPPLQALPSPPASF 807
Score = 26.6 bits (57), Expect = 9.6
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Query: 86 PEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPP 138
P P PL++P PP +S SA PPP + P L P + PP
Sbjct: 692 PSQAPPSLAAPPLQVPP-SPPASPPMSPSATPPPQA----PPPLAAPPLQVPP 739
Score = 26.6 bits (57), Expect = 9.6
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Query: 86 PEPDTPVDCRGP-LELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPP 138
P P P P L++P PP +S SA PPP + P L P + PP
Sbjct: 722 PPPQAPPPLAAPPLQVPPS-PPASPPMSPSATPPPR----VPPLLAAPPLQVPP 770
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 35.0 bits (79), Expect = 0.027
Identities = 24/64 (37%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
Query: 86 PEPDTPVDC-----RGPLELPSIIPPERVRVSLSAPP------PPYSEVILKPSLGPTPT 134
P P PV P PS PP + SL+APP PP S + PS P P
Sbjct: 403 PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPP-MSPSATPPPQ 461
Query: 135 EPPP 138
PPP
Sbjct: 462 APPP 465
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 35.0 bits (79), Expect = 0.027
Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 86 PEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSL---GPTPTEPPPPYS 141
P P P P LP+ +PP + SLS+ PP V+ PSL GP P PPP S
Sbjct: 556 PPPGMPPPVMPP-SLPTSVPPPGMPPSLSSAGPP--PVLPPPSLSSAGPPPVLPPPSLS 611
Score = 30.4 bits (67), Expect = 0.67
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 91 PVDCRGPLELPSIIPPERVRVSLSA--PPPPYSEVILKPSLGPTPTEPPPP 139
P+ P LP +PP + +L A PPP ++ PSL PT PPP
Sbjct: 529 PLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSL---PTSVPPP 576
Score = 29.3 bits (64), Expect = 1.5
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query: 91 PVDCRGPLELP-----SIIPPERVRVSLSAPPPPY----SEVILKPSLGPTPTEPPPPYS 141
P++ P E P S +PP + + PPP Y S P P+P++ PP S
Sbjct: 140 PMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQS 199
Query: 142 F 142
+
Sbjct: 200 Y 200
Score = 28.5 bits (62), Expect = 2.5
Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 13/58 (22%)
Query: 102 SIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPPYSFRPEEYTGDQRGIDNPAF 159
S +P R V + PPPP P PPPP +P+ +Q D +F
Sbjct: 1535 SSVPVTRPPVPIPPPPPP-------------PPLPPPPPVIKPQTSAVEQERWDEDSF 1579
Score = 27.3 bits (59), Expect = 5.6
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 101 PSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPP---PPYSFRP 144
P ++P E S P PP S + S P P PP PP S +P
Sbjct: 136 PGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQP 182
>gi|119120861 formin-like 3 isoform 2 [Homo sapiens]
Length = 976
Score = 34.7 bits (78), Expect = 0.035
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 96 GPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPP 139
GP EL +PP + L AP PP EV+ P P PPPP
Sbjct: 439 GPAELSEGMPPS--DLDLLAPAPPPEEVLPLPPPPAPPLPPPPP 480
>gi|119120874 formin-like 3 isoform 1 [Homo sapiens]
Length = 1027
Score = 34.7 bits (78), Expect = 0.035
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 96 GPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPP 139
GP EL +PP + L AP PP EV+ P P PPPP
Sbjct: 490 GPAELSEGMPPS--DLDLLAPAPPPEEVLPLPPPPAPPLPPPPP 531
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 34.3 bits (77), Expect = 0.046
Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Query: 86 PEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPPYSFRP 144
P P P G L +PP L PPPP + S GP P PPPP P
Sbjct: 654 PPPPLPSGL-GSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSP 711
Score = 32.0 bits (71), Expect = 0.23
Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
Query: 88 PDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILK-----PSLGPTPTEPPPP 139
P PV PL P PP S + PPPP L P+ G P PPPP
Sbjct: 670 PMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPP 726
Score = 26.6 bits (57), Expect = 9.6
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 5/50 (10%)
Query: 102 SIIPPERVRVSLSA--PPPPYSEVILKPSLGPTPTEPPPPYSFRPEEYTG 149
SI PP + L + P PP V P P P PPPP P G
Sbjct: 651 SIPPPPPLPSGLGSLSPAPPMPPVSAGP---PLPPPPPPPPPLPPPSSAG 697
>gi|116174778 centrosome spindle pole associated protein 1 isoform b
[Homo sapiens]
Length = 1221
Score = 34.3 bits (77), Expect = 0.046
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 97 PLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPP 139
P +IPPER R++ P PP S PS+ P P+ P P
Sbjct: 435 PRHFEEMIPPERPRIAFQTPLPPLS----APSVPPIPSVHPVP 473
>gi|21389423 junctional sarcoplasmic reticulum protein 1 [Homo
sapiens]
Length = 331
Score = 34.3 bits (77), Expect = 0.046
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 11/96 (11%)
Query: 64 LVILSVFCICGLAKCFCRNC---------REPEPDTPVDCRGPLELPSIIPPERVRVSLS 114
LV+ S+ + G A CR+ R PEP P P E S +P + S
Sbjct: 128 LVLASLVALLGSAFQLCRDAVPGEAALQARVPEPWVPPSS-APREPSSPLPKFEAQAPPS 186
Query: 115 APPPPYSEVILKPSLGPTPTEPPPPYSFRPEEYTGD 150
APP P +E ++P + P E P E TG+
Sbjct: 187 APPAPRAEAEVRPKI-PGSREAAENDEEEPGEATGE 221
>gi|116174789 centrosome spindle pole associated protein 1 isoform a
[Homo sapiens]
Length = 1256
Score = 34.3 bits (77), Expect = 0.046
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 97 PLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPP 139
P +IPPER R++ P PP S PS+ P P+ P P
Sbjct: 470 PRHFEEMIPPERPRIAFQTPLPPLS----APSVPPIPSVHPVP 508
>gi|213513324 hypothetical protein LOC401115 [Homo sapiens]
Length = 139
Score = 33.9 bits (76), Expect = 0.060
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 80 CRNCREPEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSL 129
CR R P P PL L ++ PP R +S PPPP ++L +L
Sbjct: 22 CRCPRAAGPGVPEPRAAPLPLLAMAPPPACRSPMSPPPPPLLLLLLSLAL 71
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 33.9 bits (76), Expect = 0.060
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 90 TPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPPYSFRP 144
+P+ P +PP R PPPP V +PS+ PPPP + +P
Sbjct: 238 SPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKP 292
Score = 28.9 bits (63), Expect = 1.9
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 84 REPEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPP 139
R P P G E P + P+R +SLS+ PP L P P+E PPP
Sbjct: 315 RPGPPPLPPSSSGNDETPRL--PQR-NLSLSSSTPPLPSPGRSGPLPPPPSERPPP 367
Score = 26.9 bits (58), Expect = 7.4
Identities = 19/68 (27%), Positives = 24/68 (35%), Gaps = 23/68 (33%)
Query: 84 REPEPDTPVDCRGPLELPSIIPP------------ERVRVSLSAPPPPYSEVILKPSLGP 131
+ P P PV R + ++ PP R S APPPP P
Sbjct: 263 KPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPP-----------P 311
Query: 132 TPTEPPPP 139
P+ P PP
Sbjct: 312 PPSRPGPP 319
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 33.9 bits (76), Expect = 0.060
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 90 TPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPPYSFRP 144
+P+ P +PP R PPPP V +PS+ PPPP + +P
Sbjct: 238 SPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKP 292
Score = 28.9 bits (63), Expect = 1.9
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 84 REPEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPP 139
R P P G E P + P+R +SLS+ PP L P P+E PPP
Sbjct: 315 RPGPPPLPPSSSGNDETPRL--PQR-NLSLSSSTPPLPSPGRSGPLPPPPSERPPP 367
Score = 26.9 bits (58), Expect = 7.4
Identities = 19/68 (27%), Positives = 24/68 (35%), Gaps = 23/68 (33%)
Query: 84 REPEPDTPVDCRGPLELPSIIPP------------ERVRVSLSAPPPPYSEVILKPSLGP 131
+ P P PV R + ++ PP R S APPPP P
Sbjct: 263 KPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPP-----------P 311
Query: 132 TPTEPPPP 139
P+ P PP
Sbjct: 312 PPSRPGPP 319
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 33.9 bits (76), Expect = 0.060
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Query: 85 EPEPDTPVDCRGPLELPSIIPPE-RVRVSLSAPP------PPYSEVILKPSLGPTPTEPP 137
E P +P++ PL P PP + LS PP PP+ E L P PT PP
Sbjct: 508 ESSPFSPLE-ESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEELPTSPP 566
Query: 138 PPYS 141
P S
Sbjct: 567 PEAS 570
Score = 32.0 bits (71), Expect = 0.23
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 86 PEPDTPVDCRGPLELPSIIPPERVRVS----LSAPPPPYSEVILKPSLGPTPTEPPPPYS 141
P D+P+ P E P PPE R+S +S PP E L P +PT PPP S
Sbjct: 629 PPEDSPMS-PPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEAS 687
Score = 32.0 bits (71), Expect = 0.23
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 85 EPEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPPYSFRP 144
E P+ P C P ELP PP +S P SE +P L P P E P S P
Sbjct: 865 EKPPEEPGQCPAPEELPLFPPPGEPSLSPLLGEPALSEP-GEPPLSPLPEELPLSPSGEP 923
Score = 30.8 bits (68), Expect = 0.51
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 97 PLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPPYS 141
P ELP+ PPE R+S PP E + P +P PPP S
Sbjct: 558 PEELPTSPPPEASRLS-----PPPEESPMSPPPEESPMSPPPEAS 597
Score = 29.6 bits (65), Expect = 1.1
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 97 PLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPP---PYSFRPEE 146
P E P PPE S ++PPP S L P +PT PPP P S PE+
Sbjct: 666 PEESPLSPPPEE---SPTSPPPEASR--LSPPPEDSPTSPPPEDSPASPPPED 713
Score = 29.3 bits (64), Expect = 1.5
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 18/78 (23%)
Query: 86 PEPDTPVDCRGPLELPSIIP----------PERVRVSLSAPPPPYSEVILKPSLGPTPTE 135
P+P+ P C P E P + P PE + +S P S V +P L P P E
Sbjct: 772 PQPEEPCLCAVPEE-PHLSPQAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEE 830
Query: 136 -------PPPPYSFRPEE 146
P S RPEE
Sbjct: 831 SHLSPQSEEPCLSPRPEE 848
Score = 27.7 bits (60), Expect = 4.3
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Query: 86 PEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPP 138
P P+ P E P+ PPE R+S PPP S P +P PPP
Sbjct: 664 PPPEESPLSPPPEESPTSPPPEASRLS---PPPEDSPTSPPPE--DSPASPPP 711
Score = 27.3 bits (59), Expect = 5.6
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Query: 86 PEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPP--YSEVILKPSLGPTPTEPP--PPYS 141
P P+ P C P S + P+ LS P S + KP L P P +PP P
Sbjct: 817 PVPEEP--CLSPQPEESHLSPQSEEPCLSPRPEESHLSPELEKPPLSPRPEKPPEEPGQC 874
Query: 142 FRPEE 146
PEE
Sbjct: 875 PAPEE 879
Score = 26.9 bits (58), Expect = 7.4
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 97 PLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPPYS 141
P E P PPE R+S PPP S + P +P PPP S
Sbjct: 612 PEESPLSPPPEASRLS---PPPEDSP--MSPPPEESPMSPPPEVS 651
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 33.9 bits (76), Expect = 0.060
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 85 EPEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPP 139
+P+P P P LPS PP V + S+PPPP P++ P+P PPPP
Sbjct: 1468 QPQPPPPPPPPQPA-LPS--PPPLVAPTPSSPPPPPLPPPPPPAM-PSPPPPPPP 1518
Score = 31.6 bits (70), Expect = 0.30
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 101 PSIIPPERVRVSLSAPPPPYSEVILK---PSLGPTPTEPPPP 139
P PP PPPP + L P + PTP+ PPPP
Sbjct: 1458 PPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPP 1499
Score = 30.4 bits (67), Expect = 0.67
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Query: 85 EPEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPP 139
E P TP P P PP + +L +PPP + PS P P PPPP
Sbjct: 1455 EKPPPTPPPAPTPQPQPPP-PPPPPQPALPSPPPLVAPT---PSSPPPPPLPPPP 1505
>gi|126116581 retina and anterior neural fold homeobox [Homo
sapiens]
Length = 346
Score = 33.5 bits (75), Expect = 0.079
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 100 LPSIIPPERVRVSLSAPPPPYSEVILKPSLGP--TPTEPPPP 139
LP PP + + PPPP + P LGP P PPPP
Sbjct: 260 LPGFGPPAQSLPASYTPPPPPPPFLNSPPLGPGLQPLAPPPP 301
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 33.1 bits (74), Expect = 0.10
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 82 NCREPEPDTPVDCRGPLE--LPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPP 139
N P P TP PL LPS P ++ L +PP P ++ L P P PPPP
Sbjct: 170 NVPAPPPPTPPPPPPPLPPPLPSSSP---IKTPLVSPPGPLTKGNLPVVAPPVPCAPPPP 226
Score = 27.3 bits (59), Expect = 5.6
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 86 PEPDTPVDCRGPLELPSIIPP---ERVRVSLSAPPPPYSEVILKPSLGPTPTEPPP 138
P P+ P++ P + PP + + + APP P + P PTP PP
Sbjct: 184 PPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPPPPPPPPPPTPPPLPP 239
Score = 26.9 bits (58), Expect = 7.4
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 15/64 (23%)
Query: 96 GPL---ELPSIIPPERVRVSLSAPPPPY-----------SEVILKPSLGPTPTEP-PPPY 140
GPL LP + PP PPPP S+ +KP L P P PPP
Sbjct: 205 GPLTKGNLPVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPL 264
Query: 141 SFRP 144
P
Sbjct: 265 PLLP 268
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 33.1 bits (74), Expect = 0.10
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Query: 114 SAPPPPYSEVILKPSLGPTPTEPPPPYSFRPEEYTG 149
SAPPPP P L PTP+ PPPP P +G
Sbjct: 148 SAPPPP------APPLPPTPSPPPPPPPPPPPALSG 177
>gi|5729962 submaxillary gland androgen regulated protein 3 homolog
B [Homo sapiens]
Length = 79
Score = 33.1 bits (74), Expect = 0.10
Identities = 22/70 (31%), Positives = 26/70 (37%), Gaps = 13/70 (18%)
Query: 75 LAKCFCRNCREPEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPT 134
LA CF + P RGP + PP+ PPPP P GP
Sbjct: 13 LAACFTPGESQRGP------RGPYPPGPLAPPQPFGPGFVPPPPP-------PPYGPGRI 59
Query: 135 EPPPPYSFRP 144
PPPP + P
Sbjct: 60 PPPPPAPYGP 69
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
sapiens]
Length = 2462
Score = 32.7 bits (73), Expect = 0.13
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 88 PDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPPYSFRPEEY 147
P P+D + + + IPP ++V+ PP KP+ P PPPP + +PE
Sbjct: 940 PQKPLDLKQLKQRAAAIPP--IQVTKVHEPPREDAAPTKPA----PPAPPPPQNLQPESD 993
Query: 148 TGDQRG 153
Q G
Sbjct: 994 APQQPG 999
Score = 30.8 bits (68), Expect = 0.51
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 86 PEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPPYSFRPE 145
P+P + GP P PPE + P P SE P+ P P P P P+
Sbjct: 750 PKPPATLGADGPPPGPPTPPPE--DIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVVPK 807
Query: 146 E 146
E
Sbjct: 808 E 808
>gi|109689723 abl interactor 2 [Homo sapiens]
Length = 475
Score = 32.7 bits (73), Expect = 0.13
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 86 PEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPPYSFRPE 145
P P + + L L + + +S + PPPP E +P +P PPPP + E
Sbjct: 335 PPPPSILQVTPQLPLMGFVARVQENISDTPPPPPPVE---EPVFDESPPPPPPPEDYEEE 391
Query: 146 E 146
E
Sbjct: 392 E 392
>gi|20143482 melanoma antigen family E, 1 [Homo sapiens]
Length = 957
Score = 32.7 bits (73), Expect = 0.13
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 7 PGLAPTLLFSLLAGPQKIAAKCGLILACPKGFKCCGDSCCQENELFPGPVRIFVI 61
PG P+ LFS A + +KC L+L P+ K DS + + GP+ V+
Sbjct: 408 PGEGPSTLFSSSASVDRNPSKCSLVLPSPRVTKASVDSDSEGPKGAEGPIEFEVL 462
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 32.7 bits (73), Expect = 0.13
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 7/60 (11%)
Query: 86 PEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPPYSFRPE 145
P P P GP+++P+ + + PPPP P P P PPPP S P+
Sbjct: 1969 PAPPQP-SSMGPVKIPNTVSTPLQAPPPTPPPPP------PPPPPPPPPPPPPPPSAPPQ 2021
Score = 27.7 bits (60), Expect = 4.3
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 10/54 (18%)
Query: 86 PEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPP 139
P P P P + + P V L APPP P P PPPP
Sbjct: 1963 PPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPT----------PPPPPPPPPP 2006
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 32.3 bits (72), Expect = 0.18
Identities = 23/56 (41%), Positives = 23/56 (41%), Gaps = 15/56 (26%)
Query: 86 PEPDTPVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVILKPSLGPTPTEPPPPYS 141
P P P GP PP R R APPPP PS PT PPPP S
Sbjct: 288 PPPPPPPHNSGPPP-----PPARGR---GAPPPP-------PSRAPTAAPPPPPPS 328
Score = 32.0 bits (71), Expect = 0.23
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Query: 91 PVDCRGPLELPSIIPPERVRVSLSAPPPPYSEVI-----LKPSLGPTPTEPPPP 139
P R P P PP R S++ PPPP + + PS P+ PPPP
Sbjct: 312 PPPSRAPTAAPP--PPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPP 363
Score = 31.2 bits (69), Expect = 0.39
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 115 APPPPYSEVILKPSLGPTPTEPPPPYSFRPEEYTGDQRGIDNP 157
APPPP PS G P PPPP++ P RG P
Sbjct: 276 APPPP------PPSRGGPPPPPPPPHNSGPPPPPARGRGAPPP 312
Score = 31.2 bits (69), Expect = 0.39
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 86 PEPDTPVDCRGPLELPSIIPPERVRVSLSAP----PPPYSEVILKPSLGPTPTEPPPP 139
P P P P + PP + SAP PPP S + + P P P PPPP
Sbjct: 325 PPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPP 382
>gi|153266778 arg tyrosine kinase isoform c [Homo sapiens]
Length = 1167
Score = 32.3 bits (72), Expect = 0.18
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 106 PERVRVSLSAPPPPYSEVILKPSLGPTPTEPP 137
P RV+ + PPPP ++ PS+ PTE P
Sbjct: 960 PRRVKPKCAPPPPPVMRLLQHPSICSDPTEEP 991
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.145 0.491
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,811,011
Number of Sequences: 37866
Number of extensions: 635191
Number of successful extensions: 5435
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 320
Number of HSP's that attempted gapping in prelim test: 3958
Number of HSP's gapped (non-prelim): 1509
length of query: 159
length of database: 18,247,518
effective HSP length: 94
effective length of query: 65
effective length of database: 14,688,114
effective search space: 954727410
effective search space used: 954727410
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.