Guide to the Human Genome
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Search of human proteins with 23199998

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|23199998 NOL1/NOP2/Sun domain family, member 5 isoform 1
[Homo sapiens]
         (466 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|23199998 NOL1/NOP2/Sun domain family, member 5 isoform 1 [Hom...   933   0.0  
gi|8922322 NOL1/NOP2/Sun domain family, member 5 isoform 2 [Homo...   857   0.0  
gi|87298836 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Ho...   478   e-135
gi|23200000 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Ho...   478   e-135
gi|23200002 NOL1/NOP2/Sun domain family, member 5C isoform 2 [Ho...   417   e-116
gi|88758572 NOL1/NOP2/Sun domain family, member 5B [Homo sapiens]     298   9e-81
gi|88758570 NOL1/NOP2/Sun domain family, member 5B [Homo sapiens]     298   9e-81
gi|21717803 NOL1/NOP2/Sun domain family, member 5B [Homo sapiens]     298   9e-81
gi|76150625 nucleolar protein 1, 120kDa [Homo sapiens]                109   5e-24
gi|76150623 nucleolar protein 1, 120kDa [Homo sapiens]                109   5e-24
gi|187828635 NOL1/NOP2/Sun domain family, member 7 [Homo sapiens]     105   7e-23
gi|32698918 NOL1/NOP2/Sun domain family, member 6 [Homo sapiens]       75   1e-13
gi|39995082 NOL1/NOP2/Sun domain family, member 2 [Homo sapiens]       74   3e-13
gi|11545785 NOL1/NOP2/Sun domain family, member 3 [Homo sapiens]       52   1e-06
gi|40316918 NOL1/NOP2/Sun domain family 4 protein [Homo sapiens]       49   1e-05
gi|71274172 ankyrin repeat domain 56 [Homo sapiens]                    34   0.25 
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         33   0.42 
gi|4557733 latent transforming growth factor beta binding protei...    33   0.72 
gi|42544243 dynamin 3 isoform a [Homo sapiens]                         33   0.72 
gi|209915561 dynamin 3 isoform b [Homo sapiens]                        33   0.72 
gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens]        33   0.72 
gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo sapi...    32   0.94 
gi|4507103 small nuclear RNA activating complex, polypeptide 2, ...    32   1.6  
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s...    31   2.7  
gi|7705590 TP53RK binding protein [Homo sapiens]                       31   2.7  
gi|237512940 early growth response 4 [Homo sapiens]                    30   3.6  
gi|14042939 chromosome 10 open reading frame 11 [Homo sapiens]         30   3.6  
gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens]                30   4.7  
gi|113416994 PREDICTED: hypothetical protein [Homo sapiens]            30   6.1  
gi|113416470 PREDICTED: hypothetical protein [Homo sapiens]            30   6.1  

>gi|23199998 NOL1/NOP2/Sun domain family, member 5 isoform 1 [Homo
           sapiens]
          Length = 466

 Score =  933 bits (2412), Expect = 0.0
 Identities = 466/466 (100%), Positives = 466/466 (100%)

Query: 1   MGLYAAAAGVLAGVESRQGSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLL 60
           MGLYAAAAGVLAGVESRQGSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLL
Sbjct: 1   MGLYAAAAGVLAGVESRQGSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLL 60

Query: 61  RAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNED 120
           RAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNED
Sbjct: 61  RAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNED 120

Query: 121 LLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFL 180
           LLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFL
Sbjct: 121 LLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFL 180

Query: 181 LDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNK 240
           LDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNK
Sbjct: 181 LDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNK 240

Query: 241 TSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVH 300
           TSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVH
Sbjct: 241 TSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVH 300

Query: 301 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCS 360
           YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCS
Sbjct: 301 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCS 360

Query: 361 LCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVA 420
           LCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVA
Sbjct: 361 LCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVA 420

Query: 421 VIERVEVPSSASQAKASAPERTPSPAPKRKKRQQRAAAGACTPPCT 466
           VIERVEVPSSASQAKASAPERTPSPAPKRKKRQQRAAAGACTPPCT
Sbjct: 421 VIERVEVPSSASQAKASAPERTPSPAPKRKKRQQRAAAGACTPPCT 466


>gi|8922322 NOL1/NOP2/Sun domain family, member 5 isoform 2 [Homo
           sapiens]
          Length = 429

 Score =  857 bits (2215), Expect = 0.0
 Identities = 428/428 (100%), Positives = 428/428 (100%)

Query: 1   MGLYAAAAGVLAGVESRQGSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLL 60
           MGLYAAAAGVLAGVESRQGSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLL
Sbjct: 1   MGLYAAAAGVLAGVESRQGSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLL 60

Query: 61  RAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNED 120
           RAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNED
Sbjct: 61  RAEKKLRPHLAKVLVYELLLGKGFRGGGGRWKALLGRHQARLKAELARLKVHRGVSRNED 120

Query: 121 LLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFL 180
           LLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFL
Sbjct: 121 LLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFL 180

Query: 181 LDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNK 240
           LDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNK
Sbjct: 181 LDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNK 240

Query: 241 TSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVH 300
           TSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVH
Sbjct: 241 TSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVH 300

Query: 301 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCS 360
           YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCS
Sbjct: 301 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCS 360

Query: 361 LCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVA 420
           LCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVA
Sbjct: 361 LCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVA 420

Query: 421 VIERVEVP 428
           VIERVEVP
Sbjct: 421 VIERVEVP 428


>gi|87298836 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Homo
           sapiens]
          Length = 315

 Score =  478 bits (1230), Expect = e-135
 Identities = 240/268 (89%), Positives = 247/268 (92%)

Query: 185 MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHL 244
           MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDP               KTSHL
Sbjct: 1   MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHL 60

Query: 245 AALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILL 304
           AALLKNQGKIFAFDLDA+RLASMATLLA AGVSCCELAEEDFLAVSP DPRY EVHY+LL
Sbjct: 61  AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL 120

Query: 305 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQE 364
           DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYS CSLCQE
Sbjct: 121 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQE 180

Query: 365 ENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVAVIER 424
           ENED+V+DALQQNPGAFRLAPALPA PHRGLSTFPGAEHCLRASP+TTLS GFFVAVIER
Sbjct: 181 ENEDMVQDALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIER 240

Query: 425 VEVPSSASQAKASAPERTPSPAPKRKKR 452
           VE+P+SASQAKASAPERTPSPAPKRKKR
Sbjct: 241 VEMPTSASQAKASAPERTPSPAPKRKKR 268


>gi|23200000 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Homo
           sapiens]
          Length = 315

 Score =  478 bits (1230), Expect = e-135
 Identities = 240/268 (89%), Positives = 247/268 (92%)

Query: 185 MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHL 244
           MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDP               KTSHL
Sbjct: 1   MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHL 60

Query: 245 AALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILL 304
           AALLKNQGKIFAFDLDA+RLASMATLLA AGVSCCELAEEDFLAVSP DPRY EVHY+LL
Sbjct: 61  AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL 120

Query: 305 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQE 364
           DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYS CSLCQE
Sbjct: 121 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQE 180

Query: 365 ENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVAVIER 424
           ENED+V+DALQQNPGAFRLAPALPA PHRGLSTFPGAEHCLRASP+TTLS GFFVAVIER
Sbjct: 181 ENEDMVQDALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIER 240

Query: 425 VEVPSSASQAKASAPERTPSPAPKRKKR 452
           VE+P+SASQAKASAPERTPSPAPKRKKR
Sbjct: 241 VEMPTSASQAKASAPERTPSPAPKRKKR 268


>gi|23200002 NOL1/NOP2/Sun domain family, member 5C isoform 2 [Homo
           sapiens]
          Length = 291

 Score =  417 bits (1071), Expect = e-116
 Identities = 216/268 (80%), Positives = 223/268 (83%), Gaps = 24/268 (8%)

Query: 185 MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHL 244
           MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDP               KTSHL
Sbjct: 1   MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHL 60

Query: 245 AALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILL 304
           AALLKNQGKIFAFDLDA+RLASMATLLA AGVSCCELAEEDFLAVSP DPRY EVHY+LL
Sbjct: 61  AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL 120

Query: 305 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQE 364
           DPSCSGSGMPSRQLEEPGAGTPSP                        RLVYS CSLCQE
Sbjct: 121 DPSCSGSGMPSRQLEEPGAGTPSP------------------------RLVYSMCSLCQE 156

Query: 365 ENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVAVIER 424
           ENED+V+DALQQNPGAFRLAPALPA PHRGLSTFPGAEHCLRASP+TTLS GFFVAVIER
Sbjct: 157 ENEDMVQDALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIER 216

Query: 425 VEVPSSASQAKASAPERTPSPAPKRKKR 452
           VE+P+SASQAKASAPERTPSPAPKRKKR
Sbjct: 217 VEMPTSASQAKASAPERTPSPAPKRKKR 244


>gi|88758572 NOL1/NOP2/Sun domain family, member 5B [Homo sapiens]
          Length = 154

 Score =  298 bits (762), Expect = 9e-81
 Identities = 145/154 (94%), Positives = 150/154 (97%)

Query: 313 MPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRD 372
           MPSRQLE+PGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYS CSLCQEENED+V D
Sbjct: 1   MPSRQLEDPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQEENEDMVPD 60

Query: 373 ALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVAVIERVEVPSSAS 432
           ALQQNPGAFRLAPALPA PHRGLSTFPGAEHCLRASP+TTLS GFFVAVIERVE+P+SAS
Sbjct: 61  ALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSAS 120

Query: 433 QAKASAPERTPSPAPKRKKRQQRAAAGACTPPCT 466
           QAKASAPERTPSPAPKRKKRQQRAAAGACTPPCT
Sbjct: 121 QAKASAPERTPSPAPKRKKRQQRAAAGACTPPCT 154


>gi|88758570 NOL1/NOP2/Sun domain family, member 5B [Homo sapiens]
          Length = 154

 Score =  298 bits (762), Expect = 9e-81
 Identities = 145/154 (94%), Positives = 150/154 (97%)

Query: 313 MPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRD 372
           MPSRQLE+PGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYS CSLCQEENED+V D
Sbjct: 1   MPSRQLEDPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQEENEDMVPD 60

Query: 373 ALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVAVIERVEVPSSAS 432
           ALQQNPGAFRLAPALPA PHRGLSTFPGAEHCLRASP+TTLS GFFVAVIERVE+P+SAS
Sbjct: 61  ALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSAS 120

Query: 433 QAKASAPERTPSPAPKRKKRQQRAAAGACTPPCT 466
           QAKASAPERTPSPAPKRKKRQQRAAAGACTPPCT
Sbjct: 121 QAKASAPERTPSPAPKRKKRQQRAAAGACTPPCT 154


>gi|21717803 NOL1/NOP2/Sun domain family, member 5B [Homo sapiens]
          Length = 154

 Score =  298 bits (762), Expect = 9e-81
 Identities = 145/154 (94%), Positives = 150/154 (97%)

Query: 313 MPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRD 372
           MPSRQLE+PGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYS CSLCQEENED+V D
Sbjct: 1   MPSRQLEDPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQEENEDMVPD 60

Query: 373 ALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVAVIERVEVPSSAS 432
           ALQQNPGAFRLAPALPA PHRGLSTFPGAEHCLRASP+TTLS GFFVAVIERVE+P+SAS
Sbjct: 61  ALQQNPGAFRLAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSAS 120

Query: 433 QAKASAPERTPSPAPKRKKRQQRAAAGACTPPCT 466
           QAKASAPERTPSPAPKRKKRQQRAAAGACTPPCT
Sbjct: 121 QAKASAPERTPSPAPKRKKRQQRAAAGACTPPCT 154


>gi|76150625 nucleolar protein 1, 120kDa [Homo sapiens]
          Length = 808

 Score =  109 bits (273), Expect = 5e-24
 Identities = 109/352 (30%), Positives = 155/352 (44%), Gaps = 57/352 (16%)

Query: 131 ASQLPRFV--RVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLLDPL---- 184
           A+++PR V  R NTLKT   D+      +G +                    LDPL    
Sbjct: 299 ANEVPRPVTLRTNTLKTRRRDLAQALINRGVN--------------------LDPLGKWS 338

Query: 185 MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHL 244
              L+V+ +   +   P Y AGH +LQ  +S LP M L P     ++D C APG KTS++
Sbjct: 339 KTGLVVYDSSVPIGATPEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYM 398

Query: 245 AALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEED---FLAVSPSDPRYHEVHY 301
           A L+KN G I A D +A+RL S+   L R GV+   ++  D   F  V     R      
Sbjct: 399 AQLMKNTGVILANDANAERLKSVVGNLHRLGVTNTIISHYDGRQFPKVVGGFDR------ 452

Query: 302 ILLDPSCSGSGMPSRQLEEPGAGTPSPVR-LHALAGFQQRALCHAL-----TFPSLQRLV 355
           +LLD  CSG+G+ S+   +P   T    + +   A  Q+  L  A+     T  +   LV
Sbjct: 453 VLLDAPCSGTGVISK---DPAVKTNKDEKDILRCAHLQKELLLSAIDSVNATSKTGGYLV 509

Query: 356 YSTCSLCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTF------PGAEHCLRASP 409
           Y TCS+  EENE VV  AL++     RL P    +   G + F      P      R  P
Sbjct: 510 YCTCSITVEENEWVVDYALKKR--NVRLVPTGLDFGQEGFTRFRERRFHPSLRSTRRFYP 567

Query: 410 ETTLSSGFFVAVIERV--EVP-SSASQAKASAPERT--PSPAPKRKKRQQRA 456
            T    GFF+A  ++    +P S    ++ + P     P   PK +   Q A
Sbjct: 568 HTHNMDGFFIAKFKKFSNSIPQSQTGNSETATPTNVDLPQVIPKSENSSQPA 619


>gi|76150623 nucleolar protein 1, 120kDa [Homo sapiens]
          Length = 808

 Score =  109 bits (273), Expect = 5e-24
 Identities = 109/352 (30%), Positives = 155/352 (44%), Gaps = 57/352 (16%)

Query: 131 ASQLPRFV--RVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLLDPL---- 184
           A+++PR V  R NTLKT   D+      +G +                    LDPL    
Sbjct: 299 ANEVPRPVTLRTNTLKTRRRDLAQALINRGVN--------------------LDPLGKWS 338

Query: 185 MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHL 244
              L+V+ +   +   P Y AGH +LQ  +S LP M L P     ++D C APG KTS++
Sbjct: 339 KTGLVVYDSSVPIGATPEYLAGHYMLQGASSMLPVMALAPQEHERILDMCCAPGGKTSYM 398

Query: 245 AALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEED---FLAVSPSDPRYHEVHY 301
           A L+KN G I A D +A+RL S+   L R GV+   ++  D   F  V     R      
Sbjct: 399 AQLMKNTGVILANDANAERLKSVVGNLHRLGVTNTIISHYDGRQFPKVVGGFDR------ 452

Query: 302 ILLDPSCSGSGMPSRQLEEPGAGTPSPVR-LHALAGFQQRALCHAL-----TFPSLQRLV 355
           +LLD  CSG+G+ S+   +P   T    + +   A  Q+  L  A+     T  +   LV
Sbjct: 453 VLLDAPCSGTGVISK---DPAVKTNKDEKDILRCAHLQKELLLSAIDSVNATSKTGGYLV 509

Query: 356 YSTCSLCQEENEDVVRDALQQNPGAFRLAPALPAWPHRGLSTF------PGAEHCLRASP 409
           Y TCS+  EENE VV  AL++     RL P    +   G + F      P      R  P
Sbjct: 510 YCTCSITVEENEWVVDYALKKR--NVRLVPTGLDFGQEGFTRFRERRFHPSLRSTRRFYP 567

Query: 410 ETTLSSGFFVAVIERV--EVP-SSASQAKASAPERT--PSPAPKRKKRQQRA 456
            T    GFF+A  ++    +P S    ++ + P     P   PK +   Q A
Sbjct: 568 HTHNMDGFFIAKFKKFSNSIPQSQTGNSETATPTNVDLPQVIPKSENSSQPA 619


>gi|187828635 NOL1/NOP2/Sun domain family, member 7 [Homo sapiens]
          Length = 718

 Score =  105 bits (263), Expect = 7e-23
 Identities = 104/362 (28%), Positives = 166/362 (45%), Gaps = 35/362 (9%)

Query: 94  LLGRHQARLKAELARLKV-HRGVSRNEDLLE-VGSRPGPASQLPRFVRVNTLKTCSDDVV 151
           LL   + +L A LAR ++ H  +S    L E V  +   AS LP +  +NT K   ++V 
Sbjct: 160 LLNSFKIKLAAALARCRIKHDALSIYHILPETVRKQELRASTLPLYAWINTCKISPEEVY 219

Query: 152 DYFKRQGFSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPA--QTDLHEHPLYRAGHLI 209
           +  KR+G++       +DD      K F +D    ++L+FP+  + DL    L++   LI
Sbjct: 220 NNLKRRGYNKVKSVLHIDD------KVFAVDQHCYDVLIFPSHLKNDLINIDLFKDYKLI 273

Query: 210 LQDRASCLPAMLLDP--PPGSHVIDACAAPGNKTSHLAALLKNQ-GKIFAFDLDAK-RLA 265
            QD++  L    +         V+          SH++ L  N   K+F   + ++ +  
Sbjct: 274 FQDKSRSLAVHSVKALLNMDDDVLMVNTGSWYTVSHMSILTNNNTSKVFVCGVQSQAKDP 333

Query: 266 SMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPS---------- 315
            + TL  + G    E+  E F+ +   D R  +V  ILL P CSG G+ +          
Sbjct: 334 DLKTLFTKIGCKNIEILHEKFINIESKDHRLQKVKVILLLPRCSGLGVSNPVEFILNEHE 393

Query: 316 --RQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRDA 373
               L++   G  S  +LH LA  Q   L HA+ F   Q +VY TCS+  EENE VV+ A
Sbjct: 394 DTEFLKDHSQGGISVDKLHVLAQQQYEQLTHAMKFTKAQAVVYCTCSVFPEENEAVVKKA 453

Query: 374 LQ-QNPG----AFRLAPALPAWPHRGLSTFP-GAEHCLRASPETTLSSGFFVAVIERVEV 427
           L+ Q+ G     +RL+P  P  P   L       +   R  P + +++G F++++ R   
Sbjct: 454 LEFQDLGNKGQPYRLSP--PVLPLCSLKEIQLSTDKFFRMEP-SEITNGCFLSILTRERD 510

Query: 428 PS 429
           PS
Sbjct: 511 PS 512


>gi|32698918 NOL1/NOP2/Sun domain family, member 6 [Homo sapiens]
          Length = 469

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 17/193 (8%)

Query: 207 HLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDL---DAKR 263
           +L LQ+  S L + +L+P PG  ++D CAAPG KT+H+AAL+ +QG++ A D      ++
Sbjct: 215 YLFLQNLPSALVSHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIALDKIFNKVEK 274

Query: 264 LASMATLLARAGVSC-----CELAEEDFLAVSPSDPRY--HEVHYILLDPSCSGSGMPSR 316
           +   A LL    +        +  + D +  +  +P +       ILLD  CSG G    
Sbjct: 275 IKQNALLLGLNSIRAFCFDGTKAVKLDMVEDTEGEPPFLPESFDRILLDAPCSGMGQRPN 334

Query: 317 QLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQR-LVYSTCSLCQEENEDVVRDALQ 375
                 A T S   + +    Q++    A+     +  LVYSTC++   ENE+ V  AL 
Sbjct: 335 M-----ACTWSVKEVASYQPLQRKLFTAAVQLLKPEGVLVYSTCTITLAENEEQVAWALT 389

Query: 376 QNPGAFRLAPALP 388
           + P   +L P  P
Sbjct: 390 KFP-CLQLQPQEP 401


>gi|39995082 NOL1/NOP2/Sun domain family, member 2 [Homo sapiens]
          Length = 767

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 65/211 (30%), Positives = 97/211 (45%), Gaps = 20/211 (9%)

Query: 205 AGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLK-------NQGKIFAF 257
           +G++  Q+  S +P +LL+  P   ++D CAAPG+KT+ L  +L         +G + A 
Sbjct: 155 SGNISRQEAVSMIPPLLLNVRPHHKILDMCAAPGSKTTQLIEMLHADMNVPFPEGFVIAN 214

Query: 258 DLDAKRLASMATLLARAGVSCCELAEEDFLAVS----PSDPRYHEVHY--ILLDPSCSGS 311
           D+D KR   +     R    C  +   D  ++       D R   + Y  IL D  CSG 
Sbjct: 215 DVDNKRCYLLVHQAKRLSSPCIMVVNHDASSIPRLQIDVDGRKEILFYDRILCDVPCSGD 274

Query: 312 GMPSRQLEEPGAGTP-SPVRLHALAGFQQR-ALCHALTFPSLQRLVYSTCSLCQEENEDV 369
           G   + ++     T  + ++LH   G Q R A   A       R+VYSTCSL   E+E V
Sbjct: 275 GTMRKNIDVWKKWTTLNSLQLH---GLQLRIATRGAEQLAEGGRMVYSTCSLNPIEDEAV 331

Query: 370 VRDALQQNPGAFRLAPALPAWPHRGLSTFPG 400
           +   L+++ GA  LA      P  GL   PG
Sbjct: 332 IASLLEKSEGALELADVSNELP--GLKWMPG 360


>gi|11545785 NOL1/NOP2/Sun domain family, member 3 [Homo sapiens]
          Length = 340

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 23/220 (10%)

Query: 174 LKGKHFLLDPLMPE--------LLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPP 225
           LKG H L    +P         L   P +     H +       L + AS LP + L+  
Sbjct: 71  LKGYHTLSQGSLPNYPKSVKCYLSRTPGRIPSERHQIGNLKKYYLLNAASLLPVLALELR 130

Query: 226 PGSHVIDACAAPGNKTSHLAALLK--NQGKIFAFDLDAKRL----ASMATLLARAGVSCC 279
            G  V+D CAAPG K+    ALL+    G +   + D+ RL     ++ + + +  ++  
Sbjct: 131 DGEKVLDLCAAPGGKS---IALLQCACPGYLHCNEYDSLRLRWLRQTLESFIPQPLINVI 187

Query: 280 ELAEEDFLAVSPSDPRYHEVHYILLDPSCSG--SGMPSRQLEEPGAGTPSPVRLHALAGF 337
           +++E D   +  + P   +   +L+D  CS   S + S   ++          L  L   
Sbjct: 188 KVSELDGRKMGDAQPEMFD--KVLVDAPCSNDRSWLFSSDSQKASCRISQRRNLPLLQIE 245

Query: 338 QQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRDALQQN 377
             R+   AL    +  LVYSTC+L + EN+DV+ + L  +
Sbjct: 246 LLRSAIKALRPGGI--LVYSTCTLSKAENQDVISEILNSH 283


>gi|40316918 NOL1/NOP2/Sun domain family 4 protein [Homo sapiens]
          Length = 384

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 59/195 (30%), Positives = 84/195 (43%), Gaps = 21/195 (10%)

Query: 196 DLHEHPLYRAGHL-----ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKN 250
           D+   P  R G L      L D AS LP + L   PG  V+D CAAPG KT    ALL+ 
Sbjct: 138 DISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKT---LALLQT 194

Query: 251 Q--GKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPR-YHEVH-----YI 302
                + A DL   R+A +  +L        E+ + + + V+  D R + E+       +
Sbjct: 195 GCCRNLAANDLSPSRIARLQKILHSYVPE--EIRDGNQVRVTSWDGRKWGELEGDTYDRV 252

Query: 303 LLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHAL--TFPSLQRLVYSTCS 360
           L+D  C+       + E              L   Q + L   L  T P    +VYSTCS
Sbjct: 253 LVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPG-GHVVYSTCS 311

Query: 361 LCQEENEDVVRDALQ 375
           L   +NE VV+ A++
Sbjct: 312 LSHLQNEYVVQGAIE 326


>gi|71274172 ankyrin repeat domain 56 [Homo sapiens]
          Length = 793

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 46/156 (29%), Positives = 59/156 (37%), Gaps = 27/156 (17%)

Query: 305 DPSCSG-SGMPSRQLEEPGAGTPS------PVRLHALAGFQQRALCHALTFPSLQRLVYS 357
           D +C+G  G  SR+    G G+        PV   A AG Q RA C A            
Sbjct: 142 DAACNGLPGSDSRRAPGKGGGSKGSPGQRPPVPAAAAAGAQARASCAAAKTQG------R 195

Query: 358 TCSLCQEENEDVVRDALQQNPGAF----RLAPALPAWPHRGLSTFPGAEHCLRASPETTL 413
            C  C + N  V+   L   P +     + A ALPA   RG S         R   E  L
Sbjct: 196 CCWECLQNNLAVLPGELGALPHSATAEEKPARALPAQDDRGAS---------REREEGAL 246

Query: 414 SSGFFV-AVIERVEVPSSASQAKASAPERTPSPAPK 448
           +    V AV         A+ ++AS P   P PAP+
Sbjct: 247 AEPAPVPAVAHSPPATVEAATSRASPPALLPGPAPR 282


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 42/159 (26%), Positives = 55/159 (34%), Gaps = 13/159 (8%)

Query: 306  PSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEE 365
            P+CS   +P+  L  P    P+P    A       +   AL  P        T  L    
Sbjct: 1543 PACSPVLVPASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSP 1602

Query: 366  NEDVVR-DALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFVAVIER 424
               +     L  +PGA   AP L +      S  P       ++P T+L+S   V     
Sbjct: 1603 APPLAPLPVLAPSPGA---APVLAS------SQTPVPVMAPSSTPGTSLASASPVPAPTP 1653

Query: 425  VEVPSSASQAKASAPERTPSPAPKRKKRQQRAAAGACTP 463
            V  PSS    +   P   PSP P     Q  A A A  P
Sbjct: 1654 VLAPSST---QTMLPAPVPSPLPSPASTQTLALAPALAP 1689


>gi|4557733 latent transforming growth factor beta binding protein 2
            [Homo sapiens]
          Length = 1821

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 19/151 (12%)

Query: 270  LLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAG--TPS 327
            +LA  G + CE  E  FL +  SD   ++      +  C   G   + + E   G   P+
Sbjct: 1352 MLAVCGAALCENVEGSFLCLCASDLEEYDAQ----EGHCRPRGAGGQSMSEAPTGDHAPA 1407

Query: 328  PVRLHALAGFQQRALCHALTFPSLQRLVY---------STCSLCQEENEDVVRDALQQNP 378
            P R+   +G +  A C ++   +  +              C LC  E+     +      
Sbjct: 1408 PTRMDCYSGQKGHAPCSSVLGRNTTQAECCCTQGASWGDACDLCPSEDSAEFSEICPSGK 1467

Query: 379  GAFRLAPALPAWPHRGLSTFPGAEHCLRASP 409
            G     P   AW   G + +  A+ C+   P
Sbjct: 1468 G---YIPVEGAWTF-GQTMYTDADECVIFGP 1494


>gi|42544243 dynamin 3 isoform a [Homo sapiens]
          Length = 863

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 7/67 (10%)

Query: 384 APALPA-WPHRGLSTFPGAEHCLRASPETTLSSGFFVAVIERVEVPSSASQAKASAPERT 442
           APA+P+  PH G    P     L   P ++ S G         +VPS  ++A  S P R 
Sbjct: 790 APAIPSPGPHSGAPPVPFRPGPLPPFPSSSDSFG------APPQVPSRPTRAPPSVPSRR 843

Query: 443 PSPAPKR 449
           P P+P R
Sbjct: 844 PPPSPTR 850


>gi|209915561 dynamin 3 isoform b [Homo sapiens]
          Length = 859

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 7/67 (10%)

Query: 384 APALPA-WPHRGLSTFPGAEHCLRASPETTLSSGFFVAVIERVEVPSSASQAKASAPERT 442
           APA+P+  PH G    P     L   P ++ S G         +VPS  ++A  S P R 
Sbjct: 786 APAIPSPGPHSGAPPVPFRPGPLPPFPSSSDSFG------APPQVPSRPTRAPPSVPSRR 839

Query: 443 PSPAPKR 449
           P P+P R
Sbjct: 840 PPPSPTR 846


>gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens]
          Length = 269

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 39/159 (24%), Positives = 58/159 (36%), Gaps = 29/159 (18%)

Query: 310 GSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDV 369
           G G     L EPGA  P+           + A+  +    S+  +   T  LC +E   +
Sbjct: 34  GRGAEPGALGEPGAAAPAMYD-------DESAIDFSAYIDSMAAV--PTLELCHDE---L 81

Query: 370 VRDALQQNPGAFRLAPA--LPAWPHRGLSTFPGAEHCLRASPET-------TLSSGFFVA 420
             D    N  A    P   LP  P R L   P A   L+  P+        +L      A
Sbjct: 82  FADLFNSNHKAGGAGPLELLPGGPARPLGPGPAAPRLLKREPDWGDGDAPGSLLPAQVAA 141

Query: 421 VIERV--------EVPSSASQAKASAPERTPSPAPKRKK 451
             + V          P ++ +   S+P +TP+P P R+K
Sbjct: 142 CAQTVVSLAAAGQPTPPTSPEPPRSSPRQTPAPGPAREK 180


>gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo
           sapiens]
          Length = 946

 Score = 32.3 bits (72), Expect = 0.94
 Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 383 LAPALPAWPHRGLS-TFPGAEHCLRASPETTLSSGFFVAVIERVEVPSSASQAKASAPER 441
           L+P     P RG S  FP AE     SPE   S G + +   R+   S +    + +   
Sbjct: 42  LSPGSVFSPGRGASFLFPPAESL---SPEEPRSPGGWRSGRRRLNSSSGSGSGSSGSSVS 98

Query: 442 TPSPAPK-RKKRQQRAAAGACTPP 464
           +PS A + R  RQQ  AAG  +PP
Sbjct: 99  SPSWAGRLRGDRQQVVAAGTLSPP 122


>gi|4507103 small nuclear RNA activating complex, polypeptide 2,
           45kDa [Homo sapiens]
          Length = 334

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/24 (62%), Positives = 19/24 (79%), Gaps = 1/24 (4%)

Query: 426 EVPSSASQAKASAPERTPSPAPKR 449
           E+PSSA  A +SAP RTP PAP++
Sbjct: 166 EIPSSAPAAPSSAP-RTPDPAPEK 188


>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
            sapiens]
          Length = 4911

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 367  EDVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHC-LRASPETTLSSGFFVAVIERV 425
            +D++  AL Q P    +  +LP  PH         +HC  R +P++ + S    +V+  V
Sbjct: 3955 DDLLARALAQGPKTVDVPASLPTPPHNNQEELRIQDHCGDRDTPDSFVPSSSPESVV-GV 4013

Query: 426  EVP--SSASQAKASAPERTPSP 445
            EV      S  K   PE  PSP
Sbjct: 4014 EVSRYPDLSLVKEEPPEPVPSP 4035


>gi|7705590 TP53RK binding protein [Homo sapiens]
          Length = 175

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query: 10  VLAGVESRQGSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVI 54
           +++ VE  Q S+K L    N   VK++Y L  + +    +LDA+I
Sbjct: 122 LISQVEGHQVSLKNLPEIMNITEVKKIYKLSSQEESIGTLLDAII 166


>gi|237512940 early growth response 4 [Homo sapiens]
          Length = 589

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 426 EVPSSASQAKASAPERTPSPAPKRKKRQQRAAAGACTPPC 465
           ++P S+  A    P   P+P P+ K R++    G C+  C
Sbjct: 434 DIPGSSGVAAPPVPPPPPTPFPQAKARRKGRRGGKCSTRC 473


>gi|14042939 chromosome 10 open reading frame 11 [Homo sapiens]
          Length = 198

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 6/66 (9%)

Query: 398 FPGAEHCLRASPETTLSSGFFVAVIERVEVPSSASQAKASAPERT--PSPAPKRKKRQQR 455
           F  A+   R   E  L  G F+ V++    P ++S+  AS+PER   P P+  R+    +
Sbjct: 117 FLDAQKVTRQEREEALVRGVFMKVVK----PKASSEDVASSPERHYTPLPSASRELTSHQ 172

Query: 456 AAAGAC 461
              G C
Sbjct: 173 GVLGKC 178


>gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens]
          Length = 600

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)

Query: 425 VEVPSSASQAKAS---APERTPSPAPKRKKRQQRAAAGACTPP 464
           +EVP + + AK S   +P+ +P P+PK   ++  A A    PP
Sbjct: 496 LEVPKAGAVAKGSPKPSPQPSPKPSPKNSPKKGGAPAAPPPPP 538


>gi|113416994 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 302

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 12/75 (16%)

Query: 377 NPGAFRLAPALPAWPHRGLSTFPG--AEHCLRASPETTLSSGFFVAVIERVEVPSSASQA 434
           +P  F   P +PA   +  +TFPG  AE    A P TT  +G   A          + Q 
Sbjct: 61  HPEGFPDQPLIPATEPQSSTTFPGLSAEAPAPAGPGTTRRAGHMPA----------SGQV 110

Query: 435 KASAPERTPSPAPKR 449
           +A    R P  AP R
Sbjct: 111 EARNDHRPPGRAPPR 125


>gi|113416470 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 302

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 12/75 (16%)

Query: 377 NPGAFRLAPALPAWPHRGLSTFPG--AEHCLRASPETTLSSGFFVAVIERVEVPSSASQA 434
           +P  F   P +PA   +  +TFPG  AE    A P TT  +G   A          + Q 
Sbjct: 61  HPEGFPDQPLIPATEPQSSTTFPGLSAEAPAPAGPGTTRRAGHMPA----------SGQV 110

Query: 435 KASAPERTPSPAPKR 449
           +A    R P  AP R
Sbjct: 111 EARNDHRPPGRAPPR 125


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,257,112
Number of Sequences: 37866
Number of extensions: 1018847
Number of successful extensions: 3859
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 3806
Number of HSP's gapped (non-prelim): 57
length of query: 466
length of database: 18,247,518
effective HSP length: 106
effective length of query: 360
effective length of database: 14,233,722
effective search space: 5124139920
effective search space used: 5124139920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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