Search of human proteins with 23111018

Search of human proteins with 23111018

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|23111018 RNA binding motif protein 10 isoform 2 [Homo
sapiens]
         (852 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|23111018 RNA binding motif protein 10 isoform 2 [Homo sapiens]    1716   0.0  
gi|20127479 RNA binding motif protein 10 isoform 1 [Homo sapiens]    1596   0.0  
gi|5032031 RNA binding motif protein 5 [Homo sapiens]                 803   0.0  
gi|5032033 RNA binding motif protein 6 [Homo sapiens]                 193   6e-49
gi|39725952 angiogenic factor VG5Q [Homo sapiens]                      59   2e-08
gi|8922313 G patch domain containing 2 [Homo sapiens]                  57   6e-08
gi|224282119 splicing factor, arginine/serine-rich 14 [Homo sapi...    53   1e-06
gi|224282117 splicing factor, arginine/serine-rich 14 [Homo sapi...    53   1e-06
gi|56788356 tuftelin interacting protein 11 [Homo sapiens]             52   2e-06
gi|8393259 tuftelin interacting protein 11 [Homo sapiens]              52   2e-06
gi|34101286 zinc finger RNA binding protein [Homo sapiens]             50   1e-05
gi|33469964 splicing factor 4 [Homo sapiens]                           49   2e-05
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]             49   3e-05
gi|167900474 coiled-coil domain containing 75 [Homo sapiens]           47   1e-04
gi|161016767 mucin 21 [Homo sapiens]                                   47   1e-04
gi|50962882 G patch domain containing 8 [Homo sapiens]                 45   3e-04
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]     44   8e-04
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]     44   8e-04
gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens]    44   8e-04
gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens]    44   8e-04
gi|153791630 bromodomain and WD repeat domain containing 3 [Homo...    43   0.001
gi|148747556 PIN2-interacting protein 1 [Homo sapiens]                 43   0.001
gi|229892345 GLI family zinc finger 1 isoform 2 [Homo sapiens]         42   0.002
gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens]           42   0.002
gi|63003897 transcription factor NRF [Homo sapiens]                    42   0.002
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]         42   0.002
gi|133925795 zinc finger, CCCH-type with G patch domain isoform ...    41   0.004
gi|116734698 RNA binding motif protein 23 isoform 3 [Homo sapiens]     41   0.004
gi|133925793 zinc finger, CCCH-type with G patch domain isoform ...    41   0.004
gi|133925791 zinc finger, CCCH-type with G patch domain isoform ...    41   0.004

>gi|23111018 RNA binding motif protein 10 isoform 2 [Homo sapiens]
          Length = 852

 Score = 1716 bits (4444), Expect = 0.0
 Identities = 852/852 (100%), Positives = 852/852 (100%)

Query: 1   MEYERRGGRGDRTGRYGATDRSQDDGGENRSRDHDYRDMDYRSYPREYGSQEGKHDYDDS 60
           MEYERRGGRGDRTGRYGATDRSQDDGGENRSRDHDYRDMDYRSYPREYGSQEGKHDYDDS
Sbjct: 1   MEYERRGGRGDRTGRYGATDRSQDDGGENRSRDHDYRDMDYRSYPREYGSQEGKHDYDDS 60

Query: 61  SEEQSAEIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQHSLNI 120
           SEEQSAEIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQHSLNI
Sbjct: 61  SEEQSAEIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQHSLNI 120

Query: 121 LGQKVSMHYSDPKPKINEDWLCNKCGVQNFKRREKCFKCGVPKSEAEQKLPLGTRLDQQT 180
           LGQKVSMHYSDPKPKINEDWLCNKCGVQNFKRREKCFKCGVPKSEAEQKLPLGTRLDQQT
Sbjct: 121 LGQKVSMHYSDPKPKINEDWLCNKCGVQNFKRREKCFKCGVPKSEAEQKLPLGTRLDQQT 180

Query: 181 LPLGGRELSQGLLPLPQPYQAQGVLASQALSQGSEPSSENANDTIILRNLNPHSTMDSIL 240
           LPLGGRELSQGLLPLPQPYQAQGVLASQALSQGSEPSSENANDTIILRNLNPHSTMDSIL
Sbjct: 181 LPLGGRELSQGLLPLPQPYQAQGVLASQALSQGSEPSSENANDTIILRNLNPHSTMDSIL 240

Query: 241 GALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIEAAQLLQILQALHPPLTIDGKTIN 300
           GALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIEAAQLLQILQALHPPLTIDGKTIN
Sbjct: 241 GALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIEAAQLLQILQALHPPLTIDGKTIN 300

Query: 301 VEFAKGSKRDMASNEGSRISAASVASTAIAAAQWAISQASQGGEGTWATSEEPPVDYSYY 360
           VEFAKGSKRDMASNEGSRISAASVASTAIAAAQWAISQASQGGEGTWATSEEPPVDYSYY
Sbjct: 301 VEFAKGSKRDMASNEGSRISAASVASTAIAAAQWAISQASQGGEGTWATSEEPPVDYSYY 360

Query: 361 QQDEGYGNSQGTESSLYAHGYLKGTKGPGITGTKGDPTGAGPEASLEPGADSVSMQAFSR 420
           QQDEGYGNSQGTESSLYAHGYLKGTKGPGITGTKGDPTGAGPEASLEPGADSVSMQAFSR
Sbjct: 361 QQDEGYGNSQGTESSLYAHGYLKGTKGPGITGTKGDPTGAGPEASLEPGADSVSMQAFSR 420

Query: 421 AQPGAAPGIYQQSAEASSSQGTAANSQSYTIMSPAVLKSELQSPTHPSSALPPATSPTAQ 480
           AQPGAAPGIYQQSAEASSSQGTAANSQSYTIMSPAVLKSELQSPTHPSSALPPATSPTAQ
Sbjct: 421 AQPGAAPGIYQQSAEASSSQGTAANSQSYTIMSPAVLKSELQSPTHPSSALPPATSPTAQ 480

Query: 481 ESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDGERRTYVPA 540
           ESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDGERRTYVPA
Sbjct: 481 ESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDGERRTYVPA 540

Query: 541 LEQSADGHKETGAPSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFKNSFQPISS 600
           LEQSADGHKETGAPSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFKNSFQPISS
Sbjct: 541 LEQSADGHKETGAPSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFKNSFQPISS 600

Query: 601 LRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLVAAYSGESDS 660
           LRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLVAAYSGESDS
Sbjct: 601 LRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLVAAYSGESDS 660

Query: 661 EEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLEIHRRAHLSE 720
           EEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLEIHRRAHLSE
Sbjct: 661 EEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLEIHRRAHLSE 720

Query: 721 NELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFEQPTRDGLGS 780
           NELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFEQPTRDGLGS
Sbjct: 721 NELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFEQPTRDGLGS 780

Query: 781 DNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVTSTESYKETL 840
           DNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVTSTESYKETL
Sbjct: 781 DNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVTSTESYKETL 840

Query: 841 HKTMVTRFNEAQ 852
           HKTMVTRFNEAQ
Sbjct: 841 HKTMVTRFNEAQ 852


>gi|20127479 RNA binding motif protein 10 isoform 1 [Homo sapiens]
          Length = 930

 Score = 1596 bits (4132), Expect = 0.0
 Identities = 822/933 (88%), Positives = 833/933 (89%), Gaps = 84/933 (9%)

Query: 1   MEYERRGGRGDRTGRY---------GATDRSQD-------------------------DG 26
           MEYERRGGRGDRTGRY         G  +RS+D                         D 
Sbjct: 1   MEYERRGGRGDRTGRYGATDRSQDDGGENRSRDHDYRDMDYRSYPREYGSQEGKHDYDDS 60

Query: 27  GENRS--------------------------------RDHDYRDMDYRSYPREYGSQEGK 54
            E +S                                RD DYRD DYR+   E G +E +
Sbjct: 61  SEEQSAEDSYEASPGSETQRRRRRRHRHSPTGPPGFPRDGDYRDQDYRT---EQGEEEEE 117

Query: 55  HDYDDSSEEQSA--------------EIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVE 100
            + ++  E+ S               +IRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVE
Sbjct: 118 EEDEEEEEKASNIVMLRMLPQAATEDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVE 177

Query: 101 FSHLQDATRWMEANQHSLNILGQKVSMHYSDPKPKINEDWLCNKCGVQNFKRREKCFKCG 160
           FSHLQDATRWMEANQHSLNILGQKVSMHYSDPKPKINEDWLCNKCGVQNFKRREKCFKCG
Sbjct: 178 FSHLQDATRWMEANQHSLNILGQKVSMHYSDPKPKINEDWLCNKCGVQNFKRREKCFKCG 237

Query: 161 VPKSEAEQKLPLGTRLDQQTLPLGGRELSQGLLPLPQPYQAQGVLASQALSQGSEPSSEN 220
           VPKSEAEQKLPLGTRLDQQTLPLGGRELSQGLLPLPQPYQAQGVLASQALSQGSEPSSEN
Sbjct: 238 VPKSEAEQKLPLGTRLDQQTLPLGGRELSQGLLPLPQPYQAQGVLASQALSQGSEPSSEN 297

Query: 221 ANDTIILRNLNPHSTMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTI-EAA 279
           ANDTIILRNLNPHSTMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTI EAA
Sbjct: 298 ANDTIILRNLNPHSTMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIVEAA 357

Query: 280 QLLQILQALHPPLTIDGKTINVEFAKGSKRDMASNEGSRISAASVASTAIAAAQWAISQA 339
           QLLQILQALHPPLTIDGKTINVEFAKGSKRDMASNEGSRISAASVASTAIAAAQWAISQA
Sbjct: 358 QLLQILQALHPPLTIDGKTINVEFAKGSKRDMASNEGSRISAASVASTAIAAAQWAISQA 417

Query: 340 SQGGEGTWATSEEPPVDYSYYQQDEGYGNSQGTESSLYAHGYLKGTKGPGITGTKGDPTG 399
           SQGGEGTWATSEEPPVDYSYYQQDEGYGNSQGTESSLYAHGYLKGTKGPGITGTKGDPTG
Sbjct: 418 SQGGEGTWATSEEPPVDYSYYQQDEGYGNSQGTESSLYAHGYLKGTKGPGITGTKGDPTG 477

Query: 400 AGPEASLEPGADSVSMQAFSRAQPGAAPGIYQQSAEASSSQGTAANSQSYTIMSPAVLKS 459
           AGPEASLEPGADSVSMQAFSRAQPGAAPGIYQQSAEASSSQGTAANSQSYTIMSPAVLKS
Sbjct: 478 AGPEASLEPGADSVSMQAFSRAQPGAAPGIYQQSAEASSSQGTAANSQSYTIMSPAVLKS 537

Query: 460 ELQSPTHPSSALPPATSPTAQESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYY 519
           ELQSPTHPSSALPPATSPTAQESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYY
Sbjct: 538 ELQSPTHPSSALPPATSPTAQESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYY 597

Query: 520 YNAQSQQYLYWDGERRTYVPALEQSADGHKETGAPSKEGKEKKEKHKTKTAQQIAKDMER 579
           YNAQSQQYLYWDGERRTYVPALEQSADGHKETGAPSKEGKEKKEKHKTKTAQQIAKDMER
Sbjct: 598 YNAQSQQYLYWDGERRTYVPALEQSADGHKETGAPSKEGKEKKEKHKTKTAQQIAKDMER 657

Query: 580 WARSLNKQKENFKNSFQPISSLRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLA 639
           WARSLNKQKENFKNSFQPISSLRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLA
Sbjct: 658 WARSLNKQKENFKNSFQPISSLRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLA 717

Query: 640 SDDRPSPPRGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRH 699
           SDDRPSPPRGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRH
Sbjct: 718 SDDRPSPPRGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRH 777

Query: 700 QQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRK 759
           QQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRK
Sbjct: 778 QQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRK 837

Query: 760 YGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGS 819
           YGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGS
Sbjct: 838 YGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGS 897

Query: 820 GLGARGSSYGVTSTESYKETLHKTMVTRFNEAQ 852
           GLGARGSSYGVTSTESYKETLHKTMVTRFNEAQ
Sbjct: 898 GLGARGSSYGVTSTESYKETLHKTMVTRFNEAQ 930


>gi|5032031 RNA binding motif protein 5 [Homo sapiens]
          Length = 815

 Score =  803 bits (2075), Expect = 0.0
 Identities = 456/913 (49%), Positives = 585/913 (64%), Gaps = 159/913 (17%)

Query: 1   MEYERRGGRGDRTGRYGAT-DRSQDDGGENRSR--DHDYRDM----------DYRSYPR- 46
           M  ++R  R +R+GRYG+  DR   D  E+RSR  D DY+            DYR Y   
Sbjct: 1   MGSDKRVSRTERSGRYGSIIDRDDRDERESRSRRRDSDYKRSSDDRRGDRYDDYRDYDSP 60

Query: 47  --------------------EYGSQEGKHDYDDSSEEQSAEIRG------------QLQS 74
                               +YG  + +HD  D  E ++  +RG             ++S
Sbjct: 61  ERERERRNSDRSEDGYHSDGDYGEHDYRHDISDERESKTIMLRGLPITITESDIREMMES 120

Query: 75  -HGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQHSLNILGQKVSMHYSDPK 133
             G Q  +VRLM+ K+ G SRGFAFVEF HLQDAT WMEANQ  L I G+ ++MHYS+P+
Sbjct: 121 FEGPQPADVRLMKRKT-GVSRGFAFVEFYHLQDATSWMEANQKKLVIQGKHIAMHYSNPR 179

Query: 134 PKINEDWLCNKCGVQNFKRREKCFKCGVPKSEAEQKLPLGTRLDQQTLPLGGRELSQGLL 193
           PK  EDWLCNKC + NF++R KCF+CG  K ++EQ++P GT    Q++            
Sbjct: 180 PKF-EDWLCNKCCLNNFRKRLKCFRCGADKFDSEQEVPPGTTESVQSV------------ 226

Query: 194 PLPQPYQAQGVLASQALSQGSEPSSENANDTIILRNLNPHSTMDSILGALAPYAVLSSSN 253
                                    +   DTIILRN+ PH+ +DSI+ AL+PYA L+ +N
Sbjct: 227 -------------------------DYYCDTIILRNIAPHTVVDSIMTALSPYASLAVNN 261

Query: 254 VRVIKDKQTQLNRGFAFIQLST-IEAAQLLQILQALHPPLTIDGKTINVEFAKGSKRDMA 312
           +R+IKDKQTQ NRGFAF+QLS+ ++A+QLLQILQ+LHPPL IDGKTI V+FAK +++D+ 
Sbjct: 262 IRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQSLHPPLKIDGKTIGVDFAKSARKDLV 321

Query: 313 SNEGSRISAASVASTAIAAAQWAISQASQGGEGTWATSEEPPVDYSYYQQ-DEGYGNSQG 371
            ++G+R+SA SVASTAIAAAQW+ +Q SQ GEG         VDYSY Q   +GY     
Sbjct: 322 LSDGNRVSAFSVASTAIAAAQWSSTQ-SQSGEG-------GSVDYSYLQPGQDGY----- 368

Query: 372 TESSLYAHGYLKGTKGPGITGTKGDPTGAGPEASLEPGADSVSMQAFSRAQPGAAPGIYQ 431
            + + Y+  Y                                  Q F + Q G       
Sbjct: 369 AQYAQYSQDY----------------------------------QQFYQQQAGGL----- 389

Query: 432 QSAEASSSQGTAANSQSYTIMS-----------PAVLKSELQSPTHPSSALPPATSPTAQ 480
             ++ASS+ GTA  + S  ++S           P    +E   P+  +S   PA SPT  
Sbjct: 390 -ESDASSASGTAVTTTSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGV 448

Query: 481 ESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDGERRTYVPA 540
              ++Y VPD STYQYDE+SGYYYDP TGLYYDPNSQYYYN+ +QQYLYWDGE+ TYVPA
Sbjct: 449 VPGTKYAVPDTSTYQYDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPA 508

Query: 541 LEQSADGHKETG-APSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFKNSFQPIS 599
            E S+  H+++G  P+KEGKEKKEK K+KTAQQIAKDMERWA+SLNKQKENFKNSFQP++
Sbjct: 509 AESSS--HQQSGLPPAKEGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVN 566

Query: 600 SLRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLVAAYSGESD 659
           SLR++ERRESA ADAG+A+ EKKGALAERQ    +L +   ++ P   RGLVAAYSG+SD
Sbjct: 567 SLREEERRESAAADAGFALFEKKGALAERQQLIPELVRNGDEENPL-KRGLVAAYSGDSD 625

Query: 660 SEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLEIHRRAHLS 719
           +EEE        EEKL DW+K+ACLLCRRQFP+K+AL+RHQQLS LHKQN++I+RR+ LS
Sbjct: 626 NEEELVERLESEEEKLADWKKMACLLCRRQFPNKDALVRHQQLSDLHKQNMDIYRRSRLS 685

Query: 720 ENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFEQPTRDGLG 779
           E ELEALE  + E MKYRDRAAERREKYGIPEPPEPKR+K       +V++EQPT+DG+ 
Sbjct: 686 EQELEALELRERE-MKYRDRAAERREKYGIPEPPEPKRKKQ--FDAGTVNYEQPTKDGID 742

Query: 780 SDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSSYGVTSTESYKET 839
             NIG++MLQAMGW+EGSGLGRK QGI  PIEAQ R++G+GLGA+GS+YG++  +SYK+ 
Sbjct: 743 HSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDA 802

Query: 840 LHKTMVTRFNEAQ 852
           + K M  RF E +
Sbjct: 803 VRKAMFARFTEME 815


>gi|5032033 RNA binding motif protein 6 [Homo sapiens]
          Length = 1123

 Score =  193 bits (490), Expect = 6e-49
 Identities = 133/383 (34%), Positives = 187/383 (48%), Gaps = 77/383 (20%)

Query: 494  YQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDGERRTYVPALEQSADGHKETGA 553
            Y YD  +GYYYDP  G YYDPN+Q                +  YVP         ++ G 
Sbjct: 790  YIYDSATGYYYDPLAGTYYDPNTQ----------------QEVYVP---------QDPGL 824

Query: 554  PSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFKNSFQPISSLRDDERRESATAD 613
            P +E  E KEK  T   +  +K  E   R   ++K+     FQ  +S             
Sbjct: 825  PEEE--EIKEKKPTSQGKSSSK-KEMSKRDGKEKKDRGVTRFQENAS------------- 868

Query: 614  AGYAILEKKGALAERQHTSMDLPKLASDDRPSPPR------GLVAAYSGESDSEEEQER- 666
                   +  A AE        P +  ++ P PP+      GL+  Y G+SD EEE+E  
Sbjct: 869  -------EGKAPAEDVFKKPLPPTVKKEESPPPPKVVNPLIGLLGEYGGDSDYEEEEEEE 921

Query: 667  ---------GGPER----------EEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHK 707
                       P++          E+KLTDW KLACLLCRRQFP+KE LI+HQQLS LHK
Sbjct: 922  QTPPPQPRTAQPQKREEQTKKENEEDKLTDWNKLACLLCRRQFPNKEVLIKHQQLSDLHK 981

Query: 708  QNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTAS 767
            QNLEIHR+   SE EL  LE+ + E  K++ R  +RREK    + PE KR KY       
Sbjct: 982  QNLEIHRKIKQSEQELAYLERREREG-KFKGRGNDRREKLQSFDSPERKRIKYS--RETD 1038

Query: 768  VDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSS 827
             D +   ++ + + + G  + QA GW++G+GLG    G+ +  EA+ R+RG  +GA G +
Sbjct: 1039 SDRKLVDKEDIDTSSKGGCVQQATGWRKGTGLGYGHPGLASSEEAEGRMRGPSVGASGRT 1098

Query: 828  YGVTSTESYKETLHKTMVTRFNE 850
                S E+Y++ + + M  R+ E
Sbjct: 1099 SKRQSNETYRDAVRRVMFARYKE 1121



 Score = 99.0 bits (245), Expect = 2e-20
 Identities = 95/347 (27%), Positives = 151/347 (43%), Gaps = 43/347 (12%)

Query: 1   MEYERRGGR--GDRTGRYGATDRSQDDGGENRSRDHDYRDMDYRSYPREYGSQEGKHDYD 58
           MEY     R  G +   YG + +S  +G   R    D +D DYR+ P E           
Sbjct: 404 MEYRDVDHRLPGSQMFGYGQS-KSFPEGKTARDAQRDLQDQDYRTGPSEEKPSRLIRLSG 462

Query: 59  DSSEEQSAEIRGQLQS-HGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQHS 117
              +    EI    ++  G+  + ++L +  ++G   G+  VEFS L+DA   MEANQ +
Sbjct: 463 VPEDATKEEILNAFRTPDGMPVKNLQL-KEYNTGYDYGYVCVEFSLLEDAIGCMEANQGT 521

Query: 118 LNILGQKVSMHYSDPKPKINEDWLCNKCGVQNFKRREKCFKCGVPKSEAEQKLPLGTRLD 177
           L I  ++V++ Y        + W C +C       R  C  C  P+   E K  L T   
Sbjct: 522 LMIQDKEVTLEYVSSL----DFWYCKRCKANIGGHRSSCSFCKNPREVTEAKQELITYPQ 577

Query: 178 QQTLPLGG---RELSQGLLPL---PQPYQAQGVLASQALSQGSEP--------------- 216
            Q   +     ++ +Q L P    P+P + +    S+   Q  E                
Sbjct: 578 PQKTSIPAPLEKQPNQPLRPADKEPEPRKREEGQESRLGHQKREAERYLPPSRREGPTFR 637

Query: 217 --------SSENAND----TIILRNLNPHSTMDSILGALAPYAVLSSSNVRVIKDKQTQL 264
                   S E   D    TI+L+ +   +  + I+  L PY  L+++NVR+IK++   +
Sbjct: 638 RDRERESWSGETRQDGESKTIMLKRIYRSTPPEVIVEVLEPYVRLTTANVRIIKNRTGPM 697

Query: 265 NRGFAFIQL-STIEAAQLLQILQALHPPLTIDGKTINVEFAKGSKRD 310
              + FI L S  EA ++++ILQ L PP +IDGK + V  A G +R+
Sbjct: 698 GHTYGFIDLDSHAEALRVVKILQNLDPPFSIDGKMVAVNLATGKRRN 744


>gi|39725952 angiogenic factor VG5Q [Homo sapiens]
          Length = 714

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 19/125 (15%)

Query: 705 LHKQNLEIHRRAHLSE-------NELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKR 757
           L K+  E+ RR  L +          E  ++  ++  KY+DRA +RRE+ G     +   
Sbjct: 549 LSKEEKELERRKELKKIRVKYGLQNTEYEDEKTLKNPKYKDRAGKRREQVGSEGTFQRDD 608

Query: 758 RKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVR 817
                 + ASV  E      +   N G +ML+ MGWK+G GLG+   G+ TPI+ Q R  
Sbjct: 609 ------APASVHSE------ITDSNKGRKMLEKMGWKKGEGLGKDGGGMKTPIQLQLRRT 656

Query: 818 GSGLG 822
            +GLG
Sbjct: 657 HAGLG 661



 Score = 55.1 bits (131), Expect = 3e-07
 Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 19/136 (13%)

Query: 469 SALPPATSPTAQESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYL 528
           S+L  +    A+ + SQ      + + YDE +G Y+D  TG YYD  +Q YY+  +  Y 
Sbjct: 188 SSLAESLRAAAEAAVSQ------TGFSYDENTGLYFDHSTGFYYDSENQLYYDPSTGIYY 241

Query: 529 YWDGERRTYVPALEQSADGHKETGAPSKEGKEKKEKHKTKTAQQIAKDMERWARSLNK-- 586
           Y D E   Y        D      + +K+ K+KK K K K     A + E+   S ++  
Sbjct: 242 YCDVESGRY--QFHSRVDLQPYPTSSTKQSKDKKLKKKRKDPDSSATNEEKDLNSEDQKA 299

Query: 587 ---------QKENFKN 593
                    ++ENF N
Sbjct: 300 FSVEHTSCNEEENFAN 315


>gi|8922313 G patch domain containing 2 [Homo sapiens]
          Length = 528

 Score = 57.4 bits (137), Expect = 6e-08
 Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 22/127 (17%)

Query: 696 LIRHQQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEP 755
           L+R  +    HK+N  +   +  +   L +L   D+++         RR+   +P P   
Sbjct: 405 LLRDNRAERGHKKNCSVRTASRQTSMHLGSLCTGDIKR---------RRKAAPLPGP--- 452

Query: 756 KRRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTR 815
                      +  F       +  +NIG+RMLQ MGW  GSGLGR  +GI  PI+A  R
Sbjct: 453 ----------TTAGFVGENAQPILENNIGNRMLQNMGWTPGSGLGRDGKGISEPIQAMQR 502

Query: 816 VRGSGLG 822
            +G GLG
Sbjct: 503 PKGLGLG 509


>gi|224282119 splicing factor, arginine/serine-rich 14 [Homo sapiens]
          Length = 1082

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 768  VDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSS 827
            +DF Q     L   N+G +MLQ MGWKEG GLG   +GI  P+   T   G GLGA G  
Sbjct: 1002 LDFAQQK---LTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGADGQE 1058

Query: 828  YGVTSTESYKETL 840
            +   + + +++ +
Sbjct: 1059 HKEDTFDVFRQRM 1071


>gi|224282117 splicing factor, arginine/serine-rich 14 [Homo sapiens]
          Length = 1082

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 768  VDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGSS 827
            +DF Q     L   N+G +MLQ MGWKEG GLG   +GI  P+   T   G GLGA G  
Sbjct: 1002 LDFAQQK---LTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGADGQE 1058

Query: 828  YGVTSTESYKETL 840
            +   + + +++ +
Sbjct: 1059 HKEDTFDVFRQRM 1071


>gi|56788356 tuftelin interacting protein 11 [Homo sapiens]
          Length = 837

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 754 EPKRRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQ 813
           +P ++ + G + + +DF    R   G   IG ++LQ MG+  G GLG+  QGI+ PIEA+
Sbjct: 126 KPSQKGFAGGTKSFMDFGSWERHTKG---IGQKLLQKMGYVPGRGLGKNAQGIINPIEAK 182

Query: 814 TRVRGSGLGARGSSYGVTSTESY 836
            R     +GA GS     S + +
Sbjct: 183 QRKGKGAVGAYGSERTTQSMQDF 205


>gi|8393259 tuftelin interacting protein 11 [Homo sapiens]
          Length = 837

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 754 EPKRRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQ 813
           +P ++ + G + + +DF    R   G   IG ++LQ MG+  G GLG+  QGI+ PIEA+
Sbjct: 126 KPSQKGFAGGTKSFMDFGSWERHTKG---IGQKLLQKMGYVPGRGLGKNAQGIINPIEAK 182

Query: 814 TRVRGSGLGARGSSYGVTSTESY 836
            R     +GA GS     S + +
Sbjct: 183 QRKGKGAVGAYGSERTTQSMQDF 205


>gi|34101286 zinc finger RNA binding protein [Homo sapiens]
          Length = 1074

 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 68/290 (23%), Positives = 108/290 (37%), Gaps = 36/290 (12%)

Query: 255 RVIKDKQTQLNRGFAFIQLSTIEAAQLLQILQ------ALHPPLTIDGKTIN-VEFAKGS 307
           R+ +D +      F F       AA   Q  Q      A   P T+   T++    A  +
Sbjct: 16  RLGEDAKMATGNYFGFTHSGAAAAAAAAQYSQQPASGVAYSHPTTVASYTVHQAPVAAHT 75

Query: 308 KRDMASNEGSRISAASVASTAIAAAQWAISQASQGGEGTWATSEEPPVDYSYYQQDEGYG 367
                +   + ++ A  A  A+AAA  A   A+ GG  T  T+     DY Y Q+ +   
Sbjct: 76  VTAAYAPAAATVAVARPAPVAVAAAATA---AAYGGYPTAHTA----TDYGYTQRQQEAP 128

Query: 368 NSQG---TESSLYAHGYLKGTKGPGITGTKGDPTGAGPEASLEPGADSVSMQAFSRAQPG 424
                  T++   ++ Y++ T       +K        +   +P A + ++ A ++ QP 
Sbjct: 129 PPPPPATTQNYQDSYSYVRSTAPAVAYDSK--------QYYQQPTATAAAVAAAAQPQPS 180

Query: 425 AAPGIYQQSAEASSSQGTAANSQSYTIMSPAVLKSELQSPT------HP--SSALPPATS 476
            A   YQ + +A  SQG    +Q+        +K    SP       +P  S+  P A +
Sbjct: 181 VAETYYQTAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAA 240

Query: 477 PTAQESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQ 526
            T   SY+Q      +   Y  TS   Y       Y   S YY   Q QQ
Sbjct: 241 ATVVPSYTQSATYSTTAVTYSGTS---YSGYEAAVYSAASSYYQQQQQQQ 287


>gi|33469964 splicing factor 4 [Homo sapiens]
          Length = 645

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 769 DFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPI-EAQTRVRGSGLG 822
           D+ +     L  +NIG +ML  MGWKEG GLG + QGI  P+ +  T V G+G G
Sbjct: 551 DYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVDGAGFG 605


>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
          Length = 1970

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 59/215 (27%), Positives = 82/215 (38%), Gaps = 18/215 (8%)

Query: 312  ASNEGSRISAASVASTAIAAAQWAISQASQGGEGTWATSEEPPVDYSYYQQDEGYGNSQG 371
            A   G    +A      I+ A    +Q +    G W+    P V         G+  S  
Sbjct: 1496 AGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWS----PSVGSGMTPGAAGFSPSAA 1551

Query: 372  TESSLYAHGYLKGTKGPGITGTKGDPTGAGPEASLEP---GADSVSMQAFSRAQPGAAPG 428
            +++S ++ GY      P  + T G P   GP +   P   GA S S    S A    +PG
Sbjct: 1552 SDASGFSPGY-----SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPG 1606

Query: 429  IY--QQSAEASSSQGTAANSQSYTIMSPAVL-KSELQSPTHPS-SALPPATSPTAQESYS 484
             Y  Q  + + +S   +  S SY+  SP     S   SPT PS S   P+ SPT+     
Sbjct: 1607 GYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1666

Query: 485  QYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYY 519
              P    ++  Y  TS  Y    T   Y P S  Y
Sbjct: 1667 TSPSYSPTSPSYSPTSPSY--SPTSPSYSPTSPSY 1699


>gi|167900474 coiled-coil domain containing 75 [Homo sapiens]
          Length = 259

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 775 RDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGARGS--SYGVTS 832
           ++ LG +N G  +LQ MG+K G  LG+   GIV PI    +   SG+G   S        
Sbjct: 64  KNALGCENKGFALLQKMGYKSGQALGKSGGGIVEPIPLNIKTGKSGIGHEASLKRKAEEK 123

Query: 833 TESYKETLH 841
            ESY++ +H
Sbjct: 124 LESYRKKIH 132


>gi|161016767 mucin 21 [Homo sapiens]
          Length = 566

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 65/280 (23%), Positives = 99/280 (35%), Gaps = 25/280 (8%)

Query: 217 SSENANDTIILRNLNPHSTMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTI 276
           SS  +N   I+ N   H+T   I  A        SS + +  + ++           +T 
Sbjct: 65  SSVTSNGVSIVTNSEFHTTSSGISTATNSEFSTVSSGISIATNSESS----------TTS 114

Query: 277 EAAQLLQILQALHPPLTIDGKTINVEFAKGSKRDMASNEGSRISAASVASTAIAAAQWAI 336
             A      ++  P       T +      S    A+N  S  + +S ASTA  +     
Sbjct: 115 SGASTATNSESSTPSSGASTATNSDSSTTSSGASTATNSDSS-TTSSEASTATNSE---- 169

Query: 337 SQASQGGEGTWATSEEPPVDYSYYQQDEGYGNSQGTESSLYAHGYLKGTKGPGITGTKGD 396
           S  +  G  T   SE   V             +  +ESS  + G    T     T + G 
Sbjct: 170 SSTTSSGASTATNSESSTVS-------SRASTATNSESSTTSSGASTATNSESRTTSNGA 222

Query: 397 PTGAGPEASL-EPGADSVSMQAFSRAQPGAAPGIYQQSAEASSSQGTAANSQSYTIMS-- 453
            T    E+S    GA + +    S    GA      +S+  SS  GTA NS+S T+ S  
Sbjct: 223 GTATNSESSTTSSGASTATNSESSTPSSGAGTATNSESSTTSSGAGTATNSESSTVSSGI 282

Query: 454 PAVLKSELQSPTHPSSALPPATSPTAQESYSQYPVPDVST 493
             V  SE  +P+  ++    + S T     +     D ST
Sbjct: 283 STVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSST 322



 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 44/172 (25%), Positives = 63/172 (36%), Gaps = 9/172 (5%)

Query: 320 SAASVASTAIAAAQWAISQASQGGEGTWATSEEPPVDYSYYQ--------QDEGYGNSQG 371
           S +S  S+    A  + S  +  G GT   SE   V                 G   +  
Sbjct: 243 SESSTPSSGAGTATNSESSTTSSGAGTATNSESSTVSSGISTVTNSESSTPSSGANTATN 302

Query: 372 TESSLYAHGYLKGTKGPGITGTKGDPTGAGPEASL-EPGADSVSMQAFSRAQPGAAPGIY 430
           +ESS  + G    T     T + G  T    E+S    GA + +    S    GA+    
Sbjct: 303 SESSTTSSGANTATNSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATN 362

Query: 431 QQSAEASSSQGTAANSQSYTIMSPAVLKSELQSPTHPSSALPPATSPTAQES 482
             S+  SS   TA NS+S T+ S A   +  +S T  S A     S ++  S
Sbjct: 363 SGSSTTSSGTSTATNSESSTVSSGASTATTSESSTTSSGASTATNSESSTVS 414



 Score = 40.4 bits (93), Expect = 0.007
 Identities = 37/152 (24%), Positives = 56/152 (36%), Gaps = 8/152 (5%)

Query: 320 SAASVASTAIAAAQWAISQASQGGEGTWATSEEPPVDYSYYQQDEGYGNSQGTESSLYAH 379
           S +S  S+    A  + S  +  G  T   S+             G   +  +ESS  + 
Sbjct: 288 SESSTPSSGANTATNSESSTTSSGANTATNSDSSTTS-------SGASTATNSESSTTSS 340

Query: 380 GYLKGTKGPGITGTKGDPTGAGPEASL-EPGADSVSMQAFSRAQPGAAPGIYQQSAEASS 438
           G    T     T + G  T     +S    G  + +    S    GA+     +S+  SS
Sbjct: 341 GASTATNSESSTTSSGASTATNSGSSTTSSGTSTATNSESSTVSSGASTATTSESSTTSS 400

Query: 439 SQGTAANSQSYTIMSPAVLKSELQSPTHPSSA 470
              TA NS+S T+ S A   +  +S T  S A
Sbjct: 401 GASTATNSESSTVSSGASTATNSESSTTSSGA 432


>gi|50962882 G patch domain containing 8 [Homo sapiens]
          Length = 1502

 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 768 VDFEQPTRDG-LGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLG 822
           ++ EQ + D  + SDNIG R+LQ  GWK G GLG+  QG   PI    +    G+G
Sbjct: 27  LEIEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMG 82



 Score = 30.4 bits (67), Expect = 7.3
 Identities = 57/257 (22%), Positives = 94/257 (36%), Gaps = 47/257 (18%)

Query: 542 EQSADGHKETGAPS-KEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFKNSFQPISS 600
           E+S   H+       K+  + K KHK  T ++ +K     A S  K K+  K        
Sbjct: 667 ERSGKSHRHKKKKKHKKSSKHKRKHKADTEEKSSK-----AESGEKSKKRKKR------- 714

Query: 601 LRDDERRESATADAGYAILEKKGALAERQHTSMDLP----KLASDDRPSPPRGLVAAYSG 656
            +  + + SA AD+      ++G   E   +    P    + A DD            SG
Sbjct: 715 -KRKKNKSSAPADS------ERGPKPEPPGSGSPAPPRRRRRAQDDSQRRSLPAEEGSSG 767

Query: 657 ESD----SEEEQERGGPEREEKLTDWQKLACLLCRRQFPSK---EALIRHQQLSGLH--- 706
           + D        Q+ GG + + +L          C+R+  +K    +  R Q  SG     
Sbjct: 768 KKDEGGGGSSSQDHGGRKHKGELPPSS------CQRRAGTKRSSRSSHRSQPSSGDEDSD 821

Query: 707 -KQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGIST 765
              +  +H+++    +E E  E +  E  + R R+  R   +         RR Y   S 
Sbjct: 822 DASSHRLHQKSPSQYSEEEEEEDSGSEHSRSRSRSGRRHSSH------RSSRRSYSSSSD 875

Query: 766 ASVDFEQPTRDGLGSDN 782
           AS D    +R    SD+
Sbjct: 876 ASSDQSCYSRQRSYSDD 892


>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
          Length = 2285

 Score = 43.5 bits (101), Expect = 8e-04
 Identities = 82/324 (25%), Positives = 116/324 (35%), Gaps = 68/324 (20%)

Query: 358 SYYQQDEGYGNSQGTESSLYAHGYLKGTKGPGITGTKGDPTGAGPEASLEPGADSVSMQA 417
           SY QQ   YG  QG        GY +  + P        P    P  S +P + +   Q 
Sbjct: 446 SYTQQIPPYGQ-QGPS------GYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQP 498

Query: 418 FSRAQPGAAPGIYQQSAEASSSQGTAANSQSYTIMSPAVLKSELQSPT--HPSSALPPAT 475
             + QP + P   Q S    S Q +    Q     SPA   S+ QS T  HP S  PP +
Sbjct: 499 SYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQ----SPAPYPSQ-QSTTQQHPQSQ-PPYS 552

Query: 476 SPTAQESYSQ----YPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWD 531
            P AQ  Y Q     P P   +             Q   Y  P SQ     QSQQ  Y  
Sbjct: 553 QPQAQSPYQQQQPQQPAPSTLS-------------QQAAYPQPQSQ-----QSQQTAY-- 592

Query: 532 GERRTYVPALEQSAD--GHKETGAPSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKE 589
             ++ + P  E S D  G + + APS    +  ++    + Q     +   + S++    
Sbjct: 593 -SQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPM 651

Query: 590 NFKNSFQP---ISSLRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSP 646
             + +  P    S +   +  +S  A + ++            HTS  LP +     PSP
Sbjct: 652 GTEGALSPGVSTSGISSSQGEQSNPAQSPFS-----------PHTSPHLPGIRG---PSP 697

Query: 647 -PRGLVAAYSGESDSEEEQERGGP 669
            P G        S +   Q R GP
Sbjct: 698 SPVG--------SPASVAQSRSGP 713



 Score = 31.2 bits (69), Expect = 4.3
 Identities = 40/198 (20%), Positives = 62/198 (31%), Gaps = 45/198 (22%)

Query: 385  TKGPGITGTKGDPTGAGPEASLEPGADSVSMQAFS-----------RAQPGAAPGIYQQS 433
            + G G  G  GDP       +  PG  +V+M               R +PG  P      
Sbjct: 1247 SSGQGPNGGMGDPYSR----AAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGP------ 1296

Query: 434  AEASSSQGTAANSQSYTIMSPAVLKSELQSPTHPSSALPPATSPTAQESYSQY------- 486
             E + S G            P ++ S   S  +  S  PP      Q+ +  Y       
Sbjct: 1297 -EGNMSTGAP---------QPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQ 1346

Query: 487  ------PVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWDGE-RRTYVP 539
                  P P   T  Y +    Y  P  G Y  P  ++     S  Y    G+ ++  +P
Sbjct: 1347 GTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLP 1406

Query: 540  ALEQSADGHKETGAPSKE 557
              +      ++   PS +
Sbjct: 1407 PAQPQPASQQQAAQPSPQ 1424


>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
          Length = 2068

 Score = 43.5 bits (101), Expect = 8e-04
 Identities = 82/324 (25%), Positives = 116/324 (35%), Gaps = 68/324 (20%)

Query: 358 SYYQQDEGYGNSQGTESSLYAHGYLKGTKGPGITGTKGDPTGAGPEASLEPGADSVSMQA 417
           SY QQ   YG  QG        GY +  + P        P    P  S +P + +   Q 
Sbjct: 446 SYTQQIPPYGQ-QGPS------GYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQP 498

Query: 418 FSRAQPGAAPGIYQQSAEASSSQGTAANSQSYTIMSPAVLKSELQSPT--HPSSALPPAT 475
             + QP + P   Q S    S Q +    Q     SPA   S+ QS T  HP S  PP +
Sbjct: 499 SYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQ----SPAPYPSQ-QSTTQQHPQSQ-PPYS 552

Query: 476 SPTAQESYSQ----YPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNAQSQQYLYWD 531
            P AQ  Y Q     P P   +             Q   Y  P SQ     QSQQ  Y  
Sbjct: 553 QPQAQSPYQQQQPQQPAPSTLS-------------QQAAYPQPQSQ-----QSQQTAY-- 592

Query: 532 GERRTYVPALEQSAD--GHKETGAPSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKE 589
             ++ + P  E S D  G + + APS    +  ++    + Q     +   + S++    
Sbjct: 593 -SQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPM 651

Query: 590 NFKNSFQP---ISSLRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSP 646
             + +  P    S +   +  +S  A + ++            HTS  LP +     PSP
Sbjct: 652 GTEGALSPGVSTSGISSSQGEQSNPAQSPFS-----------PHTSPHLPGIRG---PSP 697

Query: 647 -PRGLVAAYSGESDSEEEQERGGP 669
            P G        S +   Q R GP
Sbjct: 698 SPVG--------SPASVAQSRSGP 713


>gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens]
          Length = 237

 Score = 43.5 bits (101), Expect = 8e-04
 Identities = 47/233 (20%), Positives = 91/233 (39%), Gaps = 40/233 (17%)

Query: 539 PALEQSADGHKETGAPSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFKNSFQPI 598
           P ++   +  + T    KE  EKK+K     A+   K  E W + L K +E   +  +  
Sbjct: 18  PTIQDYLNRPRPTWEEVKEQLEKKKKGSKALAEFEEKMNENWKKELEKHREKLLSGSESS 77

Query: 599 SSLRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLVAAYSGES 658
           S  R  +++E           +K G  +    +S D                  + S  S
Sbjct: 78  SKKRQRKKKEK----------KKSGRYSSSSSSSSD------------------SSSSSS 109

Query: 659 DSEEEQERGGPEREEK-----------LTDWQKLACLLCRRQFPSKEALIRHQQLSGLHK 707
           DSE+E ++ G  R++K           +++ +  +    +++  SK+   + + + GL K
Sbjct: 110 DSEDEDKKQGKRRKKKKNRSHKSSESSMSETESDSKDSLKKKKKSKDGTEKEKDIKGLSK 169

Query: 708 QNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKY 760
           +         LS   L   E  +  + K + +++E REK       + K +K+
Sbjct: 170 KRKMYSEDKPLSSESLSESEYIEEVRAK-KKKSSEEREKATEKTKKKKKHKKH 221


>gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens]
          Length = 247

 Score = 43.5 bits (101), Expect = 8e-04
 Identities = 47/233 (20%), Positives = 91/233 (39%), Gaps = 40/233 (17%)

Query: 539 PALEQSADGHKETGAPSKEGKEKKEKHKTKTAQQIAKDMERWARSLNKQKENFKNSFQPI 598
           P ++   +  + T    KE  EKK+K     A+   K  E W + L K +E   +  +  
Sbjct: 28  PTIQDYLNRPRPTWEEVKEQLEKKKKGSKALAEFEEKMNENWKKELEKHREKLLSGSESS 87

Query: 599 SSLRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDDRPSPPRGLVAAYSGES 658
           S  R  +++E           +K G  +    +S D                  + S  S
Sbjct: 88  SKKRQRKKKEK----------KKSGRYSSSSSSSSD------------------SSSSSS 119

Query: 659 DSEEEQERGGPEREEK-----------LTDWQKLACLLCRRQFPSKEALIRHQQLSGLHK 707
           DSE+E ++ G  R++K           +++ +  +    +++  SK+   + + + GL K
Sbjct: 120 DSEDEDKKQGKRRKKKKNRSHKSSESSMSETESDSKDSLKKKKKSKDGTEKEKDIKGLSK 179

Query: 708 QNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKY 760
           +         LS   L   E  +  + K + +++E REK       + K +K+
Sbjct: 180 KRKMYSEDKPLSSESLSESEYIEEVRAK-KKKSSEEREKATEKTKKKKKHKKH 231


>gi|153791630 bromodomain and WD repeat domain containing 3 [Homo
            sapiens]
          Length = 1802

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 78/329 (23%), Positives = 119/329 (36%), Gaps = 52/329 (15%)

Query: 516  SQYYYNAQSQQYLYWDGERRTYVPALEQSADGHKETGAPSKEGKEKKEKHKTKTAQQIAK 575
            S+Y    QSQ+       R  Y   L  S+     +GAPS +GK+K+ K + K  Q  + 
Sbjct: 1432 SEYKSAIQSQKR-----RRPRYRKRLRSSSSSLSSSGAPSPKGKQKQMKLQPKNDQNTSV 1486

Query: 576  DMERWARSLNKQKENFKNSFQPISSLRDDE-------------RRESATADAGYAILEKK 622
               R +   +    +          L DDE              R   + D G A   + 
Sbjct: 1487 SHARTSSPFSSPVSDAAEGLS--LYLLDDEPDGPFSSSSFGGYSRSGNSHDPGKAKSFRN 1544

Query: 623  GALAERQHTSMDLPKLASDDRPSPPRGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLA 682
              L  +Q  S+D P L + D   P  G+       S SEE++  GG ++E+K T      
Sbjct: 1545 RVLPVKQDHSLDGP-LTNGDGREPRTGIKRKLL--SASEEDENMGGEDKEKKET------ 1595

Query: 683  CLLCRRQFPSKEALIRHQQLSGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAE 742
                      KE        SG    +L        S+++ E+  + D + +       +
Sbjct: 1596 ----------KEKSHLSTSESGELGSSLSSESTCG-SDSDSESTSRTDQDYVD-----GD 1639

Query: 743  RREKYGIPEPPEPKRRKYGGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRK 802
                  I   P+ K RK  G      +++     G G      R  +    + G G G +
Sbjct: 1640 HDYSKFIQTRPKRKLRKQHG--NGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSR 1697

Query: 803  KQGIVTPIEAQTRVRGSGLGARGSSYGVT 831
             +G        TR RG G G RG+S G T
Sbjct: 1698 GRG-----GGGTRGRGRGRGGRGASRGAT 1721


>gi|148747556 PIN2-interacting protein 1 [Homo sapiens]
          Length = 328

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 19/40 (47%), Positives = 25/40 (62%)

Query: 784 GSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGA 823
           G RML+ MGW +G GLG ++QG    I+ Q +    GLGA
Sbjct: 30  GQRMLEKMGWSKGKGLGAQEQGATDHIKVQVKNNHLGLGA 69


>gi|229892345 GLI family zinc finger 1 isoform 2 [Homo sapiens]
          Length = 978

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 63/248 (25%), Positives = 84/248 (33%), Gaps = 62/248 (25%)

Query: 340 SQGGEGTWATSEEPPVDYSYYQQDEGYGNSQGTESSLYAHGYLKGTKGPG-ITGTKGDPT 398
           S  G G     + PP D        GYG  +G  +  Y      G +GPG +    G PT
Sbjct: 584 SMVGSGLNPYMDFPPTDTL------GYGGPEGAAAEPY------GARGPGSLPLGPGPPT 631

Query: 399 GAGPEASLEPGADSVSMQ-------AFSRAQPG--AAPGIYQQ--------SAEASSSQG 441
             GP    +  +     Q       + S   PG  A  G Y Q          +    QG
Sbjct: 632 NYGPNPCPQQASYPDPTQETWGEFPSHSGLYPGPKALGGTYSQCPRLEHYGQVQVKPEQG 691

Query: 442 TAANSQSYTIMSPAVLKSELQSPTHPSSALPPATSPTAQESYSQYPVPDVSTYQYDETSG 501
               S S T ++P +     + P HP            Q  +S YP P  S  QY ++  
Sbjct: 692 CPVGSDS-TGLAPCLNAHPSEGPPHP------------QPLFSHYPQP--SPPQYLQSGP 736

Query: 502 YYYDPQTGLYYDPNSQYYYNA-----------------QSQQYLYWDGERRTYVPALEQS 544
           Y   P   L  +P     +++                 QSQQ L W+G  R   PA E S
Sbjct: 737 YTQPPPDYLPSEPRPCLDFDSPTHSTGQLKAQLVCNYVQSQQELLWEGGGREDAPAQEPS 796

Query: 545 ADGHKETG 552
               K  G
Sbjct: 797 YQSPKFLG 804


>gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens]
          Length = 1106

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 63/248 (25%), Positives = 84/248 (33%), Gaps = 62/248 (25%)

Query: 340 SQGGEGTWATSEEPPVDYSYYQQDEGYGNSQGTESSLYAHGYLKGTKGPG-ITGTKGDPT 398
           S  G G     + PP D        GYG  +G  +  Y      G +GPG +    G PT
Sbjct: 712 SMVGSGLNPYMDFPPTDTL------GYGGPEGAAAEPY------GARGPGSLPLGPGPPT 759

Query: 399 GAGPEASLEPGADSVSMQ-------AFSRAQPG--AAPGIYQQ--------SAEASSSQG 441
             GP    +  +     Q       + S   PG  A  G Y Q          +    QG
Sbjct: 760 NYGPNPCPQQASYPDPTQETWGEFPSHSGLYPGPKALGGTYSQCPRLEHYGQVQVKPEQG 819

Query: 442 TAANSQSYTIMSPAVLKSELQSPTHPSSALPPATSPTAQESYSQYPVPDVSTYQYDETSG 501
               S S T ++P +     + P HP            Q  +S YP P  S  QY ++  
Sbjct: 820 CPVGSDS-TGLAPCLNAHPSEGPPHP------------QPLFSHYPQP--SPPQYLQSGP 864

Query: 502 YYYDPQTGLYYDPNSQYYYNA-----------------QSQQYLYWDGERRTYVPALEQS 544
           Y   P   L  +P     +++                 QSQQ L W+G  R   PA E S
Sbjct: 865 YTQPPPDYLPSEPRPCLDFDSPTHSTGQLKAQLVCNYVQSQQELLWEGGGREDAPAQEPS 924

Query: 545 ADGHKETG 552
               K  G
Sbjct: 925 YQSPKFLG 932


>gi|63003897 transcription factor NRF [Homo sapiens]
          Length = 690

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)

Query: 771 EQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLG 822
           E+  +  +  DNIG+++L+ MGW  G GLG+  +GI  PI  + + +  GLG
Sbjct: 542 EEAYKQQIKEDNIGNQLLRKMGW-TGGGLGKSGEGIREPISVKEQHKREGLG 592


>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
          Length = 953

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 26/186 (13%)

Query: 654 YSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQLSGLHKQNLEIH 713
           Y    + E E+ER   +RE +            R +   +E   R ++    H+++ E  
Sbjct: 398 YHNYRERERERERENRQRERERE----------RERDRERERRQREREREREHERDKERQ 447

Query: 714 RRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGGISTASVDFEQP 773
           RR    E E    ++ D  Q + RDR  ER ++ G P+P  P+          S   E P
Sbjct: 448 RRKEEWERERAKRDEKD-RQHRDRDREKEREKEKGKPKPRSPQ--------PPSRQAEPP 498

Query: 774 TRDGLGSDNIGSRMLQAMGWKE---GSGLGRKKQGI-VTPIEAQTRVRGSGLGARGSSYG 829
            ++   +   G ++ +A  WK+    S   +KK G+ V+P  A+ R + S   A  S+  
Sbjct: 499 KKE---AATTGPQVKRADEWKDPWRRSKSPKKKLGVSVSPSRARRRRKTSASSASASNSS 555

Query: 830 VTSTES 835
            +S+ S
Sbjct: 556 RSSSRS 561


>gi|133925795 zinc finger, CCCH-type with G patch domain isoform c
           [Homo sapiens]
          Length = 511

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 6/61 (9%)

Query: 761 GGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSG 820
           G  S+A   +E  TR       IGSR+L  MG++ G GLGR  +G V PI A    RG  
Sbjct: 300 GTCSSAFAGWEVHTR------GIGSRLLTKMGYEFGKGLGRHAEGRVEPIHAVVLPRGKS 353

Query: 821 L 821
           L
Sbjct: 354 L 354


>gi|116734698 RNA binding motif protein 23 isoform 3 [Homo sapiens]
          Length = 405

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 14/117 (11%)

Query: 3   YERRGGRGDRTGRYGA-TDRSQD--DGGENRSRDHDYRD-MDYRSYPREYG------SQE 52
           Y RR  R    GR      RS D   G E+RSRDH   D + YRS P   G      S E
Sbjct: 68  YRRRNSRSRSPGRQCRHRSRSWDRRHGSESRSRDHRREDRVHYRSPPLATGEPVDNLSPE 127

Query: 53  GKHDYDDSSEEQSAEIRGQ----LQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQ 105
            +        + +A IR +      S   + R+VR++ +++S +S+G A+VEF  +Q
Sbjct: 128 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQ 184



 Score = 35.4 bits (80), Expect = 0.23
 Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 27/188 (14%)

Query: 179 QTLPLGGRELSQGLLPLPQPYQAQGVLASQALSQGSEPSSENANDT-IILRNLNPHSTMD 237
           Q++PL      Q LL +P   QA     ++  +  +     N     + + +L+ + T D
Sbjct: 184 QSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNGGPMRLYVGSLHFNITED 243

Query: 238 SILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIEAAQ--LLQI---------LQ 286
            + G   P+  +   N+ ++KD  T  ++G+ FI  S  E A+  L Q+         ++
Sbjct: 244 MLRGIFEPFGKID--NIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMR 301

Query: 287 ALHPPLTIDGKTINVEFAKGSKR-DMAS-----------NEGSRISAASVASTAIAAAQW 334
             H    +DG T ++ F  G +  D+ S            EG+ I   S A+ A AAA  
Sbjct: 302 VGHVTERLDGGT-DITFPDGDQELDLGSAGGRFQLMAKLAEGAGIQLPSTAAAAAAAAAQ 360

Query: 335 AISQASQG 342
           A +    G
Sbjct: 361 AAALQLNG 368


>gi|133925793 zinc finger, CCCH-type with G patch domain isoform a
           [Homo sapiens]
          Length = 531

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 6/61 (9%)

Query: 761 GGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSG 820
           G  S+A   +E  TR       IGSR+L  MG++ G GLGR  +G V PI A    RG  
Sbjct: 320 GTCSSAFAGWEVHTR------GIGSRLLTKMGYEFGKGLGRHAEGRVEPIHAVVLPRGKS 373

Query: 821 L 821
           L
Sbjct: 374 L 374


>gi|133925791 zinc finger, CCCH-type with G patch domain isoform c
           [Homo sapiens]
          Length = 511

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 6/61 (9%)

Query: 761 GGISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSG 820
           G  S+A   +E  TR       IGSR+L  MG++ G GLGR  +G V PI A    RG  
Sbjct: 300 GTCSSAFAGWEVHTR------GIGSRLLTKMGYEFGKGLGRHAEGRVEPIHAVVLPRGKS 353

Query: 821 L 821
           L
Sbjct: 354 L 354


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.127    0.363 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,001,248
Number of Sequences: 37866
Number of extensions: 1769440
Number of successful extensions: 10270
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 384
Number of HSP's that attempted gapping in prelim test: 9191
Number of HSP's gapped (non-prelim): 1473
length of query: 852
length of database: 18,247,518
effective HSP length: 111
effective length of query: 741
effective length of database: 14,044,392
effective search space: 10406894472
effective search space used: 10406894472
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.