| Name: PSMB11 | Sequence: fasta or formatted (300aa) | NCBI GI: 153791216 | |
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Description: proteasome beta 11 subunit
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 11.3 34 3 C cysteine 3.3 10 1 D aspartate 5.7 17 1 E glutamate 5.7 17 2 F phenylalanine 2.0 6 1 G glycine 9.0 27 2 H histidine 4.3 13 1 I isoleucine 1.3 4 1 K lysine 1.3 4 1 L leucine 9.0 27 2 M methionine 1.7 5 2 N asparagine 0.0 0 0 P proline 6.3 19 1 Q glutamine 4.0 12 1 R arginine 7.7 23 1 S serine 8.7 26 2 T threonine 6.0 18 3 V valine 7.0 21 1 W tryptophan 1.7 5 1 Y tyrosine 4.0 12 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 proteasome beta 11 subunit PSMB8 0.366 proteasome beta 8 subunit isoform E2 proprotein [Hom... PSMB5 0.356 proteasome beta 5 subunit isoform 1 PSMB8 0.347 proteasome beta 8 subunit isoform E1 proprotein [Homo... PSMB5 0.252 proteasome beta 5 subunit isoform 2 PSMB5 0.180 proteasome beta 5 subunit isoform 3 PSMB6 0.129 proteasome beta 6 subunit PSMB7 0.107 proteasome beta 7 subunit proprotein PSMB9 0.102 proteasome beta 9 subunit isoform 1 proprotein PSMB9 0.100 proteasome beta 9 subunit isoform 2 proprotein [Homo... PSMB10 0.085 proteasome beta 10 subunit proprotein PSMB1 0.043 proteasome beta 1 subunit PSMA5 0.037 proteasome alpha 5 subunit PSMB3 0.027 proteasome beta 3 subunit PSMA2 0.015 proteasome subunit alpha type 2 PSMB4 0.013 proteasome beta 4 subunit SLC6A5 0.010 solute carrier family 6 (neurotransmitter transporte... CEBPA 0.010 CCAAT/enhancer binding protein alpha LOC100289782 0.010 PREDICTED: hypothetical protein XP_002347588 AATF 0.008 apoptosis antagonizing transcription factor ARMCX2 0.008 ALEX2 protein ARMCX2 0.008 ALEX2 protein MADCAM1 0.007 mucosal vascular addressin cell adhesion molecule 1... LOC644246 0.005 PREDICTED: hypothetical protein LOC644246 VARS2 0.005 valyl-tRNA synthetase 2, mitochondrial SEMA5B 0.005 semaphorin 5B isoform 1 HCN4 0.005 hyperpolarization activated cyclic nucleotide-gated p... TNFRSF6B 0.005 tumor necrosis factor receptor superfamily, member 6... TNFRSF6B 0.005 tumor necrosis factor receptor superfamily, member 6b...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
