Guide to the Human Genome
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Name: CNPY4 Sequence: fasta or formatted (248aa) NCBI GI: 22749479
Description:

canopy 4 homolog

Referenced in:

Toll-like Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         11           2
 C cysteine            2.4          6           1
 D aspartate           5.2         13           3
 E glutamate          17.7         44          10
 F phenylalanine       2.0          5           1
 G glycine             7.7         19           2
 H histidine           2.8          7           2
 I isoleucine          2.0          5           1
 K lysine              6.9         17           2
 L leucine            12.9         32           2
 M methionine          2.0          5           1
 N asparagine          0.8          2           1
 P proline             3.2          8           1
 Q glutamine           4.4         11           1
 R arginine            4.8         12           1
 S serine              4.4         11           1
 T threonine           6.5         16           1
 V valine              6.0         15           1
 W tryptophan          1.6          4           1
 Y tyrosine            2.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   canopy 4 homolog 
CNPY3                 0.362   trinucleotide repeat containing 5 
EHMT2                 0.052   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.052   euchromatic histone-lysine N-methyltransferase 2 is...
CNPY2                 0.044   canopy 2 homolog 
PLEKHG5               0.044   pleckstrin homology domain containing family G membe...
PLEKHG5               0.044   pleckstrin homology domain containing family G memb...
PLEKHG5               0.044   pleckstrin homology domain containing family G memb...
PLEKHG5               0.044   pleckstrin homology domain containing family G memb...
PLEKHG5               0.044   pleckstrin homology domain containing family G memb...
TTBK1                 0.033   tau tubulin kinase 1 
CENPB                 0.033   centromere protein B 
CLSPN                 0.031   claspin 
YTHDC1                0.031   splicing factor YT521-B isoform 2 
YTHDC1                0.031   splicing factor YT521-B isoform 1 
PELP1                 0.029   proline, glutamic acid and leucine rich protein 1 [...
MYST4                 0.029   MYST histone acetyltransferase (monocytic leukemia)...
CNGB1                 0.029   cyclic nucleotide gated channel beta 1 isoform a [H...
LOC728792             0.029   PREDICTED: hypothetical protein 
LOC100289089          0.029   PREDICTED: hypothetical protein XP_002343359 
MYT1                  0.029   myelin transcription factor 1 
NEFH                  0.029   neurofilament, heavy polypeptide 200kDa 
TRIM26                0.029   tripartite motif-containing 26 
DAXX                  0.029   death-domain associated protein isoform a 
DAXX                  0.029   death-domain associated protein isoform a 
DAXX                  0.029   death-domain associated protein isoform b 
FKBP8                 0.029   FK506-binding protein 8 
ZFHX3                 0.029   AT-binding transcription factor 1 
NEUROD2               0.029   neurogenic differentiation 2 
SLC24A1               0.029   solute carrier family 24 (sodium/potassium/calcium ex...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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