Guide to the Human Genome
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Name: CNPY2 Sequence: fasta or formatted (182aa) NCBI GI: 7657176
Description:

canopy 2 homolog

Referenced in:

Fibroblast Growth Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         12           1
 C cysteine            3.3          6           1
 D aspartate           8.2         15           1
 E glutamate          11.0         20           2
 F phenylalanine       2.2          4           2
 G glycine             6.6         12           1
 H histidine           3.3          6           1
 I isoleucine          6.0         11           1
 K lysine              4.9          9           2
 L leucine            11.0         20           3
 M methionine          1.6          3           1
 N asparagine          2.2          4           1
 P proline             2.2          4           1
 Q glutamine           3.3          6           1
 R arginine            6.6         12           2
 S serine              7.7         14           2
 T threonine           3.3          6           1
 V valine              5.5         10           2
 W tryptophan          2.2          4           1
 Y tyrosine            2.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   canopy 2 homolog 
CNPY1                 0.129   canopy 1 homolog 
CNPY4                 0.060   canopy 4 homolog 
HOMER2                0.034   homer 2 isoform 2 
HOMER2                0.034   homer 2 isoform 1 
CNPY3                 0.034   trinucleotide repeat containing 5 
HOMER2                0.023   homer 2 isoform 4 
HOMER2                0.023   homer 2 isoform 3 
CTTNBP2               0.011   cortactin binding protein 2 
IKZF5                 0.011   zinc finger protein, subfamily 1A, 5 
LMNA                  0.009   lamin A/C isoform 3 
LMNA                  0.009   lamin A/C isoform 2 
LMNA                  0.009   lamin A/C isoform 1 precursor 
KCNH3                 0.009   potassium voltage-gated channel, subfamily H (eag-re...
RTL1                  0.006   retrotransposon-like 1 
TEX11                 0.006   testis expressed sequence 11 isoform 2 
TEX11                 0.006   testis expressed sequence 11 isoform 1 
LOC730144             0.006   PREDICTED: similar to eukaryotic translation initia...
LOC730144             0.006   PREDICTED: similar to eukaryotic translation initia...
LOC730144             0.006   PREDICTED: similar to eukaryotic translation initia...
EIF1                  0.006   eukaryotic translation initiation factor 1 
EIF1B                 0.006   translation factor sui1 homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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