Guide to the Human Genome
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Name: C2orf57 Sequence: fasta or formatted (395aa) NCBI GI: 22749257
Description:

hypothetical protein LOC165100

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         40           2
 C cysteine            0.0          0           0
 D aspartate           6.1         24           2
 E glutamate           5.6         22           2
 F phenylalanine       1.5          6           2
 G glycine             6.3         25           1
 H histidine           2.8         11           1
 I isoleucine          2.0          8           1
 K lysine              2.8         11           1
 L leucine             8.1         32           2
 M methionine          2.8         11           1
 N asparagine          1.8          7           1
 P proline             9.6         38           4
 Q glutamine           5.3         21           1
 R arginine            4.3         17           2
 S serine             14.9         59           3
 T threonine           6.6         26           2
 V valine              7.1         28           2
 W tryptophan          1.0          4           1
 Y tyrosine            1.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC165100 
RUNX2                 0.026   runt-related transcription factor 2 isoform b [Homo...
LOC100294236          0.023   PREDICTED: similar to diffuse panbronchiolitis crit...
TAF4                  0.023   TBP-associated factor 4 
CCNK                  0.023   cyclin K isoform 1 
MICALL1               0.023   molecule interacting with Rab13 
MED1                  0.019   mediator complex subunit 1 
TCOF1                 0.019   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.019   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.019   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.019   Treacher Collins-Franceschetti syndrome 1 isoform b ...
TCOF1                 0.019   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.019   Treacher Collins-Franceschetti syndrome 1 isoform c ...
QRICH1                0.019   glutamine-rich 1 
QRICH1                0.019   glutamine-rich 1 
SRRM2                 0.019   splicing coactivator subunit SRm300 
MLL2                  0.017   myeloid/lymphoid or mixed-lineage leukemia 2 
REPS2                 0.017   RALBP1 associated Eps domain containing 2 isoform 2...
REPS2                 0.017   RALBP1 associated Eps domain containing 2 isoform 1...
GPR152                0.017   G protein-coupled receptor 152 
AFF1                  0.017   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
MAGEC1                0.017   melanoma antigen family C, 1 
RUNX2                 0.016   runt-related transcription factor 2 isoform a [Homo...
MLL                   0.016   myeloid/lymphoid or mixed-lineage leukemia protein [...
RUNX2                 0.016   runt-related transcription factor 2 isoform c 
SNAP91                0.016   synaptosomal-associated protein, 91kDa homolog 
SPEN                  0.016   spen homolog, transcriptional regulator 
CASZ1                 0.016   castor homolog 1, zinc finger isoform a 
CASZ1                 0.016   castor homolog 1, zinc finger isoform b 
LARP4B                0.016   La ribonucleoprotein domain family, member 4B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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