| Name: PROCA1 | Sequence: fasta or formatted (336aa) | NCBI GI: 22748973 | |
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Description: protein interacting with cyclin A1
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.8 16 1 C cysteine 3.6 12 2 D aspartate 4.5 15 2 E glutamate 11.6 39 9 F phenylalanine 0.9 3 1 G glycine 5.4 18 1 H histidine 3.3 11 2 I isoleucine 3.0 10 2 K lysine 11.3 38 4 L leucine 4.8 16 1 M methionine 1.2 4 1 N asparagine 2.7 9 1 P proline 7.7 26 2 Q glutamine 2.4 8 1 R arginine 6.5 22 1 S serine 12.8 43 4 T threonine 5.7 19 2 V valine 4.8 16 1 W tryptophan 1.8 6 1 Y tyrosine 1.5 5 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 protein interacting with cyclin A1 PLA2G3 0.047 phospholipase A2, group III precursor NEFH 0.036 neurofilament, heavy polypeptide 200kDa MAP1B 0.033 microtubule-associated protein 1B NOLC1 0.031 nucleolar and coiled-body phosphoprotein 1 TAF3 0.030 RNA polymerase II transcription factor TAFII140 [Ho... SR140 0.030 U2-associated SR140 protein TCOF1 0.030 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.030 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.030 Treacher Collins-Franceschetti syndrome 1 isoform a ... TCOF1 0.030 Treacher Collins-Franceschetti syndrome 1 isoform c ... PRPF4B 0.028 serine/threonine-protein kinase PRP4K TCOF1 0.028 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.028 Treacher Collins-Franceschetti syndrome 1 isoform b ... SLC4A3 0.028 solute carrier family 4, anion exchanger, member 3 ... SMTNL1 0.028 smoothelin-like 1 LOC100133698 0.027 PREDICTED: hypothetical protein LOC100294088 0.027 PREDICTED: hypothetical protein, partial PPIG 0.027 peptidylprolyl isomerase G BAT2D1 0.027 HBxAg transactivated protein 2 MYH13 0.025 myosin, heavy polypeptide 13, skeletal muscle [Homo... TRDN 0.025 triadin GON4L 0.025 gon-4-like isoform a CHD6 0.025 chromodomain helicase DNA binding protein 6 NAV2 0.025 neuron navigator 2 isoform 3 NAV2 0.025 neuron navigator 2 isoform 1 NAV2 0.025 neuron navigator 2 isoform 2 NEFM 0.024 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.024 neurofilament, medium polypeptide 150kDa isoform 2 ... PRPF38B 0.024 PRP38 pre-mRNA processing factor 38 (yeast) domain ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
