Search of human proteins with 22538796

Search of human proteins with 22538796

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|22538796 small inducible cytokine A25 precursor [Homo
sapiens]
         (150 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22538796 small inducible cytokine A25 precursor [Homo sapiens]     311   2e-85
gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens]    44   4e-05
gi|4506835 small inducible cytokine A21 precursor [Homo sapiens]       42   1e-04
gi|22538811 chemokine (C-C motif) ligand 28 precursor [Homo sapi...    42   3e-04
gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]      37   0.006
gi|22538814 small inducible cytokine A5 precursor [Homo sapiens]       35   0.018
gi|22538808 small inducible cytokine A23 isoform CKbeta8 precurs...    35   0.018
gi|22538806 small inducible cytokine A23 isoform CKbeta8-1 precu...    35   0.018
gi|4759074 small inducible cytokine A16 precursor [Homo sapiens]       35   0.024
gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]       33   0.12 
gi|5730035 small inducible cytokine A27 precursor [Homo sapiens]       33   0.12 
gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]               32   0.26 
gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Hom...    32   0.26 
gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]       32   0.26 
gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Hom...    32   0.26 
gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo sap...    31   0.34 
gi|4759076 chemokine (C-C motif) ligand 20 isoform 1 [Homo sapiens]    31   0.34 
gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]       30   0.59 
gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens]            29   1.7  
gi|7705387 GTF2I repeat domain containing 1 isoform 1 [Homo sapi...    28   2.2  
gi|15011924 GTF2I repeat domain containing 1 isoform 2 [Homo sap...    28   2.2  
gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor ...    28   2.9  
gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor ...    28   2.9  
gi|4502805 chromogranin A precursor [Homo sapiens]                     28   2.9  
gi|24497620 signal recognition particle 68kDa [Homo sapiens]           27   5.0  
gi|29789058 WW and C2 domain containing 1 isoform 3 [Homo sapiens]     27   6.5  
gi|242247257 WW and C2 domain containing 1 isoform 2 [Homo sapiens]    27   6.5  
gi|242247251 WW and C2 domain containing 1 isoform 1 [Homo sapiens]    27   6.5  
gi|188497648 ubiquitin specific peptidase 37 [Homo sapiens]            27   8.5  

>gi|22538796 small inducible cytokine A25 precursor [Homo sapiens]
          Length = 150

 Score =  311 bits (796), Expect = 2e-85
 Identities = 150/150 (100%), Positives = 150/150 (100%)

Query: 1   MNLWLLACLVAGFLGAWAPAVHTQGVFEDCCLAYHYPIGWAVLRRAWTYRIQEVSGSCNL 60
           MNLWLLACLVAGFLGAWAPAVHTQGVFEDCCLAYHYPIGWAVLRRAWTYRIQEVSGSCNL
Sbjct: 1   MNLWLLACLVAGFLGAWAPAVHTQGVFEDCCLAYHYPIGWAVLRRAWTYRIQEVSGSCNL 60

Query: 61  PAAIFYLPKRHRKVCGNPKSREVQRAMKLLDARNKVFAKLHHNTQTFQAGPHAVKKLSSG 120
           PAAIFYLPKRHRKVCGNPKSREVQRAMKLLDARNKVFAKLHHNTQTFQAGPHAVKKLSSG
Sbjct: 61  PAAIFYLPKRHRKVCGNPKSREVQRAMKLLDARNKVFAKLHHNTQTFQAGPHAVKKLSSG 120

Query: 121 NSKLSSSKFSNPISSSKRNVSLLISANSGL 150
           NSKLSSSKFSNPISSSKRNVSLLISANSGL
Sbjct: 121 NSKLSSSKFSNPISSSKRNVSLLISANSGL 150


>gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo
          sapiens]
          Length = 94

 Score = 44.3 bits (103), Expect = 4e-05
 Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 10/87 (11%)

Query: 5  LLACLVAGFLGAWAPAVHTQGVFEDCCLAY-HYPIGWAVLRRAWTYRIQEVSGSCNLPAA 63
          LLA L++  LG    A     + + CC  Y H P+ W      W    +  S SC+  A 
Sbjct: 11 LLASLLSLHLGT---ATRGSDISKTCCFQYSHKPLPWT-----WVRSYEFTSNSCSQRAV 62

Query: 64 IFYLPKRHRKVCGNPKSREVQRAMKLL 90
          IF   KR +KVC +P+ + VQ+ + LL
Sbjct: 63 IF-TTKRGKKVCTHPRKKWVQKYISLL 88


>gi|4506835 small inducible cytokine A21 precursor [Homo sapiens]
          Length = 134

 Score = 42.4 bits (98), Expect = 1e-04
 Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 5/71 (7%)

Query: 23 TQGVFEDCCLAYHY-PIGWAVLRRAWTYRIQEVSGSCNLPAAIFYLPKRHR-KVCGNPKS 80
          + G  +DCCL Y    I   V+R   +YR QE S  C++PA +F   KR + ++C +PK 
Sbjct: 24 SDGGAQDCCLKYSQRKIPAKVVR---SYRKQEPSLGCSIPAILFLPRKRSQAELCADPKE 80

Query: 81 REVQRAMKLLD 91
            VQ+ M+ LD
Sbjct: 81 LWVQQLMQHLD 91


>gi|22538811 chemokine (C-C motif) ligand 28 precursor [Homo
           sapiens]
          Length = 127

 Score = 41.6 bits (96), Expect = 3e-04
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 10/95 (10%)

Query: 26  VFEDCCLAYHYPIGWAVLRRAWTYRIQEVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQR 85
           +   CC    + I   +L R    RIQ   G C+L A I ++  + R++C +P +  V++
Sbjct: 26  IASSCCTEVSHHISRRLLERVNMCRIQRADGDCDLAAVILHV--KRRRICVSPHNHTVKQ 83

Query: 86  AMKLLDAR-----NKVFAKLHH---NTQTFQAGPH 112
            MK+  A+     N    K HH   N+     G H
Sbjct: 84  WMKVQAAKKNGKGNVCHRKKHHGKRNSNRAHQGKH 118


>gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]
          Length = 119

 Score = 37.0 bits (84), Expect = 0.006
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 55 SGSCNLPAAIFYLPKRHRKVCGNPKSREVQRAMKLLDARNK 95
          S S  L A + +  K+ ++ CG+PK   VQR MK LDA+ K
Sbjct: 54 SRSTCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKNLDAKQK 94


>gi|22538814 small inducible cytokine A5 precursor [Homo sapiens]
          Length = 91

 Score = 35.4 bits (80), Expect = 0.018
 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 5/87 (5%)

Query: 5  LLACLVAGFLGAWAPAVHTQGVFEDCCLAYHYPIGWAVLRRAWTYRIQEVSGSCNLPAAI 64
          L   L+A  L A A A         CC AY        L RA        SG C+ PA +
Sbjct: 8  LAVILIATALCAPASASPYSSDTTPCCFAYIA----RPLPRAHIKEYFYTSGKCSNPAVV 63

Query: 65 FYLPKRHRKVCGNPKSREVQRAMKLLD 91
          F + +++R+VC NP+ + V+  +  L+
Sbjct: 64 F-VTRKNRQVCANPEKKWVREYINSLE 89


>gi|22538808 small inducible cytokine A23 isoform CKbeta8 precursor
           [Homo sapiens]
          Length = 120

 Score = 35.4 bits (80), Expect = 0.018
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 7/69 (10%)

Query: 29  DCCLAYH-YPIGWAVLRRAWTYRIQEVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQRAM 87
           DCC++Y    I  ++L   +     E +  C+ P  IF L K+ R+ C NP  ++VQ  +
Sbjct: 53  DCCISYTPRSIPCSLLESYF-----ETNSECSKPGVIF-LTKKGRRFCANPSDKQVQVCV 106

Query: 88  KLLDARNKV 96
           ++L    ++
Sbjct: 107 RMLKLDTRI 115


>gi|22538806 small inducible cytokine A23 isoform CKbeta8-1
           precursor [Homo sapiens]
          Length = 137

 Score = 35.4 bits (80), Expect = 0.018
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 7/69 (10%)

Query: 29  DCCLAYH-YPIGWAVLRRAWTYRIQEVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQRAM 87
           DCC++Y    I  ++L   +     E +  C+ P  IF L K+ R+ C NP  ++VQ  +
Sbjct: 70  DCCISYTPRSIPCSLLESYF-----ETNSECSKPGVIF-LTKKGRRFCANPSDKQVQVCV 123

Query: 88  KLLDARNKV 96
           ++L    ++
Sbjct: 124 RMLKLDTRI 132


>gi|4759074 small inducible cytokine A16 precursor [Homo sapiens]
          Length = 120

 Score = 35.0 bits (79), Expect = 0.024
 Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 11/76 (14%)

Query: 30  CCLAYHYPIGWAVLRRAWTYRIQEVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQRAMK- 88
           CCL Y+      VL R      ++   +C+LPA IF + KR+R+VC NP    VQ  +K 
Sbjct: 37  CCLKYYEK----VLPRRLVVGYRKAL-NCHLPAIIF-VTKRNREVCTNPNDDWVQEYIKD 90

Query: 89  ----LLDARNKVFAKL 100
               LL  RN    K+
Sbjct: 91  PNLPLLPTRNLSTVKI 106


>gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]
          Length = 97

 Score = 32.7 bits (73), Expect = 0.12
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 43 LRRAWTYRIQEVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQRAMKLLDARN 94
          L+R  +YR +  SG C   A IF   K  + +C +PK + VQ +MK LD ++
Sbjct: 43 LQRLESYR-RITSGKCPQKAVIFKT-KLAKDICADPKKKWVQDSMKYLDQKS 92


>gi|5730035 small inducible cytokine A27 precursor [Homo sapiens]
          Length = 112

 Score = 32.7 bits (73), Expect = 0.12
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 30 CCLAYHYPIGWAVLRRAWTYRIQEVSGSCNLPAAIFYLPKRHRKVCGNPKS 80
          C   Y  P+   +LR+     +QE  G C+L A + +L +  R +C +P++
Sbjct: 34 CTQLYRKPLSDKLLRKVIQVELQEADGDCHLQAFVLHLAQ--RSICIHPQN 82


>gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]
          Length = 92

 Score = 31.6 bits (70), Expect = 0.26
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 53 EVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQRAMKLLD 91
          E S  C+ P  IF L KR R+VC +P    VQ+ +  L+
Sbjct: 52 ETSSQCSKPGVIF-LTKRSRQVCADPSEEWVQKYVSDLE 89


>gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Homo
          sapiens]
          Length = 93

 Score = 31.6 bits (70), Expect = 0.26
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 53 EVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQRAMKLLD 91
          E S  C+ P+ IF L KR R+VC +P    VQ+ +  L+
Sbjct: 53 ETSSQCSKPSVIF-LTKRGRQVCADPSEEWVQKYVSDLE 90


>gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]
          Length = 89

 Score = 31.6 bits (70), Expect = 0.26
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 28 EDCCLAYHYPIGWAVLRRAWTYRIQEVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQR 85
          E CCL Y     W + ++ +     E S  C  P  I  L KR R++C +P  + VQ+
Sbjct: 28 ELCCLVY---TSWQIPQK-FIVDYSETSPQCPKPGVIL-LTKRGRQICADPNKKWVQK 80


>gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Homo
          sapiens]
          Length = 93

 Score = 31.6 bits (70), Expect = 0.26
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 53 EVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQRAMKLLD 91
          E S  C+ P+ IF L KR R+VC +P    VQ+ +  L+
Sbjct: 53 ETSSQCSKPSVIF-LTKRGRQVCADPSEEWVQKYVSDLE 90


>gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo
          sapiens]
          Length = 95

 Score = 31.2 bits (69), Expect = 0.34
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 29 DCCLAYHYPIGWAVLRRAWTYRIQEVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQRAMK 88
          DCCL Y   I        +T ++   +  C++ A IF+  K+   VC NPK   V+  ++
Sbjct: 30 DCCLGYTDRILHPKFIVGFTRQL--ANEGCDINAIIFHTKKK-LSVCANPKQTWVKYIVR 86

Query: 89 LLDARNK 95
          LL  + K
Sbjct: 87 LLSKKVK 93


>gi|4759076 chemokine (C-C motif) ligand 20 isoform 1 [Homo
          sapiens]
          Length = 96

 Score = 31.2 bits (69), Expect = 0.34
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 29 DCCLAYHYPIGWAVLRRAWTYRIQEVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQRAMK 88
          DCCL Y   I        +T ++   +  C++ A IF+  K+   VC NPK   V+  ++
Sbjct: 31 DCCLGYTDRILHPKFIVGFTRQL--ANEGCDINAIIFHTKKK-LSVCANPKQTWVKYIVR 87

Query: 89 LLDARNK 95
          LL  + K
Sbjct: 88 LLSKKVK 94


>gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]
          Length = 99

 Score = 30.4 bits (67), Expect = 0.59
 Identities = 13/29 (44%), Positives = 20/29 (68%)

Query: 63 AIFYLPKRHRKVCGNPKSREVQRAMKLLD 91
          A+ +  KR ++VC +PK R V+ +MK LD
Sbjct: 63 AVIFKTKRGKEVCADPKERWVRDSMKHLD 91


>gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens]
          Length = 397

 Score = 28.9 bits (63), Expect = 1.7
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)

Query: 52  QEVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQRAMKLLDARNKVFAKLHHNTQTFQ 108
           Q+   SC    AI    ++HR  C +PK + V+ AM+ LD   +  A L  N  TF+
Sbjct: 52  QQNQASCG-KRAIILETRQHRLFCADPKEQWVKDAMQHLD---RQAAALTRNGGTFE 104


>gi|7705387 GTF2I repeat domain containing 1 isoform 1 [Homo
           sapiens]
          Length = 959

 Score = 28.5 bits (62), Expect = 2.2
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 17/85 (20%)

Query: 77  NPKSREVQRAMKLLDARNKVFAKLHHNTQTFQ---------AGPHAV-----KKLSSGNS 122
           NP + ++ R  K+L AR  V   + +  Q F          A   ++     K++S GNS
Sbjct: 851 NPNTYDIHRLEKILKAREHVRMVIINQLQPFAEICNDAKVPAKDSSIPKRKRKRVSEGNS 910

Query: 123 KLSSSKFSNPISSSKRNVSLLISAN 147
             SSS  S   SSS  N   + SAN
Sbjct: 911 VSSSSSSS---SSSSSNPDSVASAN 932


>gi|15011924 GTF2I repeat domain containing 1 isoform 2 [Homo
           sapiens]
          Length = 944

 Score = 28.5 bits (62), Expect = 2.2
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 17/85 (20%)

Query: 77  NPKSREVQRAMKLLDARNKVFAKLHHNTQTFQ---------AGPHAV-----KKLSSGNS 122
           NP + ++ R  K+L AR  V   + +  Q F          A   ++     K++S GNS
Sbjct: 836 NPNTYDIHRLEKILKAREHVRMVIINQLQPFAEICNDAKVPAKDSSIPKRKRKRVSEGNS 895

Query: 123 KLSSSKFSNPISSSKRNVSLLISAN 147
             SSS  S   SSS  N   + SAN
Sbjct: 896 VSSSSSSS---SSSSSNPDSVASAN 917


>gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor
           [Homo sapiens]
          Length = 109

 Score = 28.1 bits (61), Expect = 2.9
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 7/61 (11%)

Query: 29  DCCLAYH-YPIGWAVLRRAWTYRIQEVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQRAM 87
           +CC  Y  Y I     +R   Y   E +  C+ P  +F + KR   VC NP  + VQ  +
Sbjct: 50  ECCFTYTTYKIP---RQRIMDY--YETNSQCSKPGIVF-ITKRGHSVCTNPSDKWVQDYI 103

Query: 88  K 88
           K
Sbjct: 104 K 104


>gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor
          [Homo sapiens]
          Length = 93

 Score = 28.1 bits (61), Expect = 2.9
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 7/61 (11%)

Query: 29 DCCLAYH-YPIGWAVLRRAWTYRIQEVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQRAM 87
          +CC  Y  Y I     +R   Y   E +  C+ P  +F + KR   VC NP  + VQ  +
Sbjct: 34 ECCFTYTTYKIP---RQRIMDY--YETNSQCSKPGIVF-ITKRGHSVCTNPSDKWVQDYI 87

Query: 88 K 88
          K
Sbjct: 88 K 88


>gi|4502805 chromogranin A precursor [Homo sapiens]
          Length = 457

 Score = 28.1 bits (61), Expect = 2.9
 Identities = 17/68 (25%), Positives = 28/68 (41%)

Query: 43  LRRAWTYRIQEVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQRAMKLLDARNKVFAKLHH 102
           LRR W    +E S    LP  +   P+  ++  G+   R   + ++ L A      K+ H
Sbjct: 390 LRRGWRPSSREDSLEAGLPLQVRGYPEEKKEEEGSANRRPEDQELESLSAIEAELEKVAH 449

Query: 103 NTQTFQAG 110
             Q  + G
Sbjct: 450 QLQALRRG 457


>gi|24497620 signal recognition particle 68kDa [Homo sapiens]
          Length = 627

 Score = 27.3 bits (59), Expect = 5.0
 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 9/92 (9%)

Query: 45  RAWTYRIQEVSGSCNLPAAIFYLPKRHRKVCGNPKSREVQRAMKLLDARNKVFAK----- 99
           RAW+Y +Q    +   P   F+L  R RK   + +  E       +DA+ K+ A+     
Sbjct: 133 RAWSYAMQLKQEANTEPRKRFHLLSRLRKAVKHAEELERLCESNRVDAKTKLEAQAYTAY 192

Query: 100 ----LHHNTQTFQAGPHAVKKLSSGNSKLSSS 127
               L    Q ++A   A  K  +   KL+S+
Sbjct: 193 LSGMLRFEHQEWKAAIEAFNKCKTIYEKLASA 224


>gi|29789058 WW and C2 domain containing 1 isoform 3 [Homo sapiens]
          Length = 1113

 Score = 26.9 bits (58), Expect = 6.5
 Identities = 16/59 (27%), Positives = 28/59 (47%)

Query: 79  KSREVQRAMKLLDARNKVFAKLHHNTQTFQAGPHAVKKLSSGNSKLSSSKFSNPISSSK 137
           +S+ +   +KL   RN++  +L   T+        +K LSS    LSS      ++SS+
Sbjct: 388 QSKALTERLKLNSKRNQLVRELEEATRQVATLHSQLKSLSSSMQSLSSGSSPGSLTSSR 446


>gi|242247257 WW and C2 domain containing 1 isoform 2 [Homo sapiens]
          Length = 1118

 Score = 26.9 bits (58), Expect = 6.5
 Identities = 16/59 (27%), Positives = 28/59 (47%)

Query: 79  KSREVQRAMKLLDARNKVFAKLHHNTQTFQAGPHAVKKLSSGNSKLSSSKFSNPISSSK 137
           +S+ +   +KL   RN++  +L   T+        +K LSS    LSS      ++SS+
Sbjct: 388 QSKALTERLKLNSKRNQLVRELEEATRQVATLHSQLKSLSSSMQSLSSGSSPGSLTSSR 446


>gi|242247251 WW and C2 domain containing 1 isoform 1 [Homo sapiens]
          Length = 1119

 Score = 26.9 bits (58), Expect = 6.5
 Identities = 16/59 (27%), Positives = 28/59 (47%)

Query: 79  KSREVQRAMKLLDARNKVFAKLHHNTQTFQAGPHAVKKLSSGNSKLSSSKFSNPISSSK 137
           +S+ +   +KL   RN++  +L   T+        +K LSS    LSS      ++SS+
Sbjct: 388 QSKALTERLKLNSKRNQLVRELEEATRQVATLHSQLKSLSSSMQSLSSGSSPGSLTSSR 446


>gi|188497648 ubiquitin specific peptidase 37 [Homo sapiens]
          Length = 979

 Score = 26.6 bits (57), Expect = 8.5
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 80  SREVQRAMKLLDARNKVFAKLHHNTQTFQAGPHAVKKLSSGNSKLSSSKFSNPISSSKRN 139
           SRE Q ++K  +  N+    L   + +F       K+ SSG + L  +  S+   S+KR+
Sbjct: 243 SREKQLSLKQSE-ENRTSGLLPLQSSSFYGSRAGSKEHSSGGTNLDRTNVSSQTPSAKRS 301

Query: 140 VSLL 143
           +  L
Sbjct: 302 LGFL 305


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.132    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,642,604
Number of Sequences: 37866
Number of extensions: 224413
Number of successful extensions: 569
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 551
Number of HSP's gapped (non-prelim): 29
length of query: 150
length of database: 18,247,518
effective HSP length: 93
effective length of query: 57
effective length of database: 14,725,980
effective search space: 839380860
effective search space used: 839380860
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.