GTF2IRD1 36019

Name: GTF2IRD1	Sequence: fasta or formatted (959aa)		NCBI GI: 7705387
Description: GTF2I repeat domain containing 1 isoform 1		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [944aa] GTF2I repeat domain containing 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 60 1 C cysteine 1.7 16 2 D aspartate 6.0 58 2 E glutamate 7.7 74 2 F phenylalanine 3.4 33 1 G glycine 6.9 66 3 H histidine 1.8 17 1 I isoleucine 5.6 54 2 K lysine 6.6 63 2 L leucine 9.6 92 2 M methionine 2.0 19 1 N asparagine 3.2 31 1 P proline 9.0 86 2 Q glutamine 2.8 27 1 R arginine 6.7 64 2 S serine 8.4 81 12 T threonine 3.3 32 2 V valine 6.4 61 2 W tryptophan 0.4 4 1 Y tyrosine 2.2 21 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 GTF2I repeat domain containing 1 isoform 1 GTF2IRD1 0.978 GTF2I repeat domain containing 1 isoform 2 LOC641765 0.192 PREDICTED: similar to hCG1983816 LOC641765 0.192 PREDICTED: similar to hCG1983816 LOC641765 0.192 PREDICTED: similar to hCG1983816 GTF2I 0.189 general transcription factor II, i isoform 4 GTF2I 0.188 general transcription factor II, i isoform 2 GTF2I 0.187 general transcription factor II, i isoform 3 GTF2I 0.187 general transcription factor II, i isoform 1 GTF2IRD2 0.082 GTF2I repeat domain containing 2 GTF2IRD2B 0.082 GTF2I repeat domain containing 2B LOC100291900 0.022 PREDICTED: similar to hCG2006635, partial LOC100288291 0.021 PREDICTED: hypothetical protein XP_002344174 LOC100290207 0.021 PREDICTED: hypothetical protein XP_002348308, parti... DCAF15 0.007 DDB1 and CUL4 associated factor 15 SRRM2 0.006 splicing coactivator subunit SRm300 LOC388553 0.005 PREDICTED: similar to hCG1645909 LOC388553 0.005 PREDICTED: similar to hCG1645909 LOC388553 0.005 PREDICTED: similar to hCG1645909 TNRC18 0.005 trinucleotide repeat containing 18 NISCH 0.005 nischarin ARL6IP4 0.005 SRp25 nuclear protein isoform 3 SP4 0.005 Sp4 transcription factor MLLT3 0.005 myeloid/lymphoid or mixed-lineage leukemia (trithor... MAGI2 0.004 membrane associated guanylate kinase, WW and PDZ dom... PPIG 0.004 peptidylprolyl isomerase G ARL6IP4 0.004 SRp25 nuclear protein isoform 4 ARL6IP4 0.004 SRp25 nuclear protein isoform 2 ARL6IP4 0.004 SRp25 nuclear protein isoform 1 VSIG1 0.004 V-set and immunoglobulin domain containing 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.