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Search of human proteins with 224967106
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|224967106 fast-twitch skeletal muscle troponin I isoform 2
[Homo sapiens]
(182 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|224967106 fast-twitch skeletal muscle troponin I isoform 2 [H... 363 e-101
gi|4507621 fast-twitch skeletal muscle troponin I isoform 1 [Hom... 353 6e-98
gi|224967057 fast-twitch skeletal muscle troponin I isoform 1 [H... 353 6e-98
gi|56682969 troponin I, skeletal, slow [Homo sapiens] 207 3e-54
gi|151101270 troponin I, cardiac [Homo sapiens] 205 2e-53
gi|118498356 kinectin 1 isoform a [Homo sapiens] 42 2e-04
gi|118498368 kinectin 1 isoform c [Homo sapiens] 42 2e-04
gi|33620775 kinectin 1 isoform a [Homo sapiens] 42 2e-04
gi|7705415 hook homolog 1 [Homo sapiens] 42 4e-04
gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo sa... 40 0.001
gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo sap... 40 0.001
gi|46852174 kinesin family member 3A [Homo sapiens] 39 0.002
gi|29171755 PTPRF interacting protein alpha 2 [Homo sapiens] 39 0.002
gi|156104908 myosin heavy chain 6 [Homo sapiens] 37 0.007
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 37 0.009
gi|81295816 nasopharyngeal epithelium specific protein 1 [Homo s... 37 0.009
gi|38570058 hypothetical protein LOC80129 [Homo sapiens] 37 0.012
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 37 0.012
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 37 0.012
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 37 0.012
gi|16975496 cortactin binding protein 2 [Homo sapiens] 37 0.012
gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein... 36 0.016
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 36 0.016
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ... 35 0.027
gi|38044112 restin isoform b [Homo sapiens] 35 0.036
gi|4506751 restin isoform a [Homo sapiens] 35 0.036
gi|238908495 similar to pleckstrin homology domain protein (5V32... 35 0.046
gi|13540600 nudE nuclear distribution gene E homolog (A. nidulan... 35 0.046
gi|71284108 nudE nuclear distribution gene E homolog (A. nidulan... 35 0.046
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 35 0.046
>gi|224967106 fast-twitch skeletal muscle troponin I isoform 2 [Homo
sapiens]
Length = 182
Score = 363 bits (931), Expect = e-101
Identities = 182/182 (100%), Positives = 182/182 (100%)
Query: 1 MSQCKKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSE 60
MSQCKKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSE
Sbjct: 1 MSQCKKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSE 60
Query: 61 VQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSAD 120
VQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSAD
Sbjct: 61 VQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSAD 120
Query: 121 AMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKMFES 180
AMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKMFES
Sbjct: 121 AMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKMFES 180
Query: 181 ES 182
ES
Sbjct: 181 ES 182
>gi|4507621 fast-twitch skeletal muscle troponin I isoform 1 [Homo
sapiens]
Length = 182
Score = 353 bits (905), Expect = 6e-98
Identities = 178/182 (97%), Positives = 179/182 (98%)
Query: 1 MSQCKKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSE 60
M +KRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSE
Sbjct: 1 MGDEEKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSE 60
Query: 61 VQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSAD 120
VQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSAD
Sbjct: 61 VQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSAD 120
Query: 121 AMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKMFES 180
AMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKMFES
Sbjct: 121 AMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKMFES 180
Query: 181 ES 182
ES
Sbjct: 181 ES 182
>gi|224967057 fast-twitch skeletal muscle troponin I isoform 1 [Homo
sapiens]
Length = 182
Score = 353 bits (905), Expect = 6e-98
Identities = 178/182 (97%), Positives = 179/182 (98%)
Query: 1 MSQCKKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSE 60
M +KRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSE
Sbjct: 1 MGDEEKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSE 60
Query: 61 VQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSAD 120
VQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSAD
Sbjct: 61 VQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSAD 120
Query: 121 AMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKMFES 180
AMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKMFES
Sbjct: 121 AMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKMFES 180
Query: 181 ES 182
ES
Sbjct: 181 ES 182
>gi|56682969 troponin I, skeletal, slow [Homo sapiens]
Length = 187
Score = 207 bits (528), Expect = 3e-54
Identities = 105/181 (58%), Positives = 138/181 (76%), Gaps = 2/181 (1%)
Query: 1 MSQCKKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPG-SMS 59
M + +++ + +R+ LKS+ML A E+E REAEK YLAE P L G S+S
Sbjct: 1 MPEVERKPKITASRKLLLKSLMLAKAKECWEQEHEEREAEKVRYLAERIPTLQTRGLSLS 60
Query: 60 EVQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSA 119
+Q+LC++LHAK++ +EE+YD+E + ++E++D+ K+ DLRGKFKRPPLRRVR+SA
Sbjct: 61 ALQDLCRELHAKVEVVDEERYDIEAKCLHNTREIKDLKLKVMDLRGKFKRPPLRRVRVSA 120
Query: 120 DAMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKMFE 179
DAML+ALLGSKHKV MDLRANLK VKKEDTEKER + +VGDWRKN+E SGMEGRKKMF+
Sbjct: 121 DAMLRALLGSKHKVSMDLRANLKSVKKEDTEKERPV-EVGDWRKNVEAMSGMEGRKKMFD 179
Query: 180 S 180
+
Sbjct: 180 A 180
>gi|151101270 troponin I, cardiac [Homo sapiens]
Length = 210
Score = 205 bits (522), Expect = 2e-53
Identities = 102/177 (57%), Positives = 135/177 (76%), Gaps = 3/177 (1%)
Query: 5 KKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPG-SMSEVQE 63
KK+++ +R+ LK+++LQIA ELE+E R EK L+ C PL + G +E+Q+
Sbjct: 36 KKKSKISASRKLQLKTLLLQIAKQELEREAEERRGEKGRALSTRCQPLELAGLGFAELQD 95
Query: 64 LCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAML 123
LC+QLHA++D +EE+YD+E +V K E+ D+ QK+FDLRGKFKRP LRRVR+SADAM+
Sbjct: 96 LCRQLHARVDKVDEERYDIEAKVTKNITEIADLTQKIFDLRGKFKRPTLRRVRISADAMM 155
Query: 124 KALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKMFES 180
+ALLG++ K +DLRA+LKQVKKEDTEKE R+VGDWRKNI+ SGMEGRKK FES
Sbjct: 156 QALLGARAKESLDLRAHLKQVKKEDTEKEN--REVGDWRKNIDALSGMEGRKKKFES 210
>gi|118498356 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 42.4 bits (98), Expect = 2e-04
Identities = 38/179 (21%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 1 MSQC-KKRNRAITARRQHLKSVMLQIAATELEKEESRRE-----AEKQNYLAEHCPPLHI 54
M +C ++++ + + L++ ++Q+A E E R E E Q+ A+ +
Sbjct: 733 MEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSF 792
Query: 55 PGSMSEVQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRR 114
+ E++++ + KI + EE ++V K ++D+ Q++ L+ + L +
Sbjct: 793 ASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEK 852
Query: 115 VRM----SADAMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKS 169
+ S L+ LL K + ++A L+ EKE+DL + G W ++++E++
Sbjct: 853 AQQLSITSKVQELQNLLKGKEEQMNTMKAVLE-------EKEKDLANTGKWLQDLQEEN 904
Score = 37.0 bits (84), Expect = 0.009
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 6 KRNRAITARRQHLKSVMLQIAATE-----LEKEESRREAEKQNYLAEHCPPLHIPGSMSE 60
+++ I + + L++ +L++A E L++E + E N E L I + E
Sbjct: 805 EKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSITSKVQE 864
Query: 61 VQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSAD 120
+Q L K +++ + + E + T K L+D+ ++ L+ + ++ ++
Sbjct: 865 LQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEASS 924
Query: 121 AM----LKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRK 163
A L+ +L K L A LK+ + + + K + L+DV D K
Sbjct: 925 ASQFEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENK 971
>gi|118498368 kinectin 1 isoform c [Homo sapiens]
Length = 1300
Score = 42.4 bits (98), Expect = 2e-04
Identities = 38/179 (21%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 1 MSQC-KKRNRAITARRQHLKSVMLQIAATELEKEESRRE-----AEKQNYLAEHCPPLHI 54
M +C ++++ + + L++ ++Q+A E E R E E Q+ A+ +
Sbjct: 733 MEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSF 792
Query: 55 PGSMSEVQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRR 114
+ E++++ + KI + EE ++V K ++D+ Q++ L+ + L +
Sbjct: 793 ASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEK 852
Query: 115 VRM----SADAMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKS 169
+ S L+ LL K + ++A L+ EKE+DL + G W ++++E++
Sbjct: 853 AQQLSITSKVQELQNLLKGKEEQMNTMKAVLE-------EKEKDLANTGKWLQDLQEEN 904
Score = 37.0 bits (84), Expect = 0.009
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 6 KRNRAITARRQHLKSVMLQIAATE-----LEKEESRREAEKQNYLAEHCPPLHIPGSMSE 60
+++ I + + L++ +L++A E L++E + E N E L I + E
Sbjct: 805 EKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSITSKVQE 864
Query: 61 VQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSAD 120
+Q L K +++ + + E + T K L+D+ ++ L+ + ++ ++
Sbjct: 865 LQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEASS 924
Query: 121 AM----LKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRK 163
A L+ +L K L A LK+ + + + K + L+DV D K
Sbjct: 925 ASQFEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENK 971
>gi|33620775 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 42.4 bits (98), Expect = 2e-04
Identities = 38/179 (21%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 1 MSQC-KKRNRAITARRQHLKSVMLQIAATELEKEESRRE-----AEKQNYLAEHCPPLHI 54
M +C ++++ + + L++ ++Q+A E E R E E Q+ A+ +
Sbjct: 733 MEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSF 792
Query: 55 PGSMSEVQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRR 114
+ E++++ + KI + EE ++V K ++D+ Q++ L+ + L +
Sbjct: 793 ASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEK 852
Query: 115 VRM----SADAMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKS 169
+ S L+ LL K + ++A L+ EKE+DL + G W ++++E++
Sbjct: 853 AQQLSITSKVQELQNLLKGKEEQMNTMKAVLE-------EKEKDLANTGKWLQDLQEEN 904
Score = 37.0 bits (84), Expect = 0.009
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 6 KRNRAITARRQHLKSVMLQIAATE-----LEKEESRREAEKQNYLAEHCPPLHIPGSMSE 60
+++ I + + L++ +L++A E L++E + E N E L I + E
Sbjct: 805 EKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSITSKVQE 864
Query: 61 VQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSAD 120
+Q L K +++ + + E + T K L+D+ ++ L+ + ++ ++
Sbjct: 865 LQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEASS 924
Query: 121 AM----LKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRK 163
A L+ +L K L A LK+ + + + K + L+DV D K
Sbjct: 925 ASQFEELEIVLKEKENELKRLEAMLKERESDLSSKTQLLQDVQDENK 971
>gi|7705415 hook homolog 1 [Homo sapiens]
Length = 728
Score = 41.6 bits (96), Expect = 4e-04
Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 58 MSEVQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRM 117
+ E+QE +Q H K++ E E+ + R+++ +++ED+ + L + K + +++
Sbjct: 489 IEELQEQLEQKHRKMNELETEQRLSKERIRELQQQIEDLQKSLQEQGSKSEGESSSKLKQ 548
Query: 118 SADAMLKAL------LGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGM 171
+A ++ L L K ++ DL+ ++ Q ++ E E L +K E+ M
Sbjct: 549 KLEAHMEKLTEVHEELQKKQELIEDLQPDINQNVQKINELEAAL------QKKDEDMKAM 602
Query: 172 EGRKKMF 178
E R KM+
Sbjct: 603 EERYKMY 609
Score = 32.0 bits (71), Expect = 0.30
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 17/85 (20%)
Query: 26 AATELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQELCKQLHAKIDAAEEEKYDMEVR 85
A ELE++ R E Q LAE E+++ C++L ++ ++EK +
Sbjct: 172 AVGELEQQLKRALEELQEALAEK----------EELRQRCEELDMQVTTLQDEKNSL--- 218
Query: 86 VQKTSKELEDMNQKLFDLRGKFKRP 110
E E MN+KL L G F P
Sbjct: 219 ----VSENEMMNEKLDQLDGSFDDP 239
>gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo
sapiens]
Length = 1185
Score = 40.0 bits (92), Expect = 0.001
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 31 EKEESRREAEKQNYLAEHC--PPLHIPGSMSEVQELCKQLHAKIDAAEEEKYDMEVRVQK 88
+ E+ R+ +++ LAE L ++ EV+ Q A + AEE ++E R+++
Sbjct: 359 QTEDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQ 418
Query: 89 TSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKALLGSKHKVCMDLRANLKQVKKED 148
+LE+ NQ+L R + K R+S D + K L S ++ + L+ + ++
Sbjct: 419 MEAQLEEKNQELQRARQREKMNEEHNKRLS-DTVDKLLSESNERLQLHLKERMAALE--- 474
Query: 149 TEKERDLRDVGDWRKNIEE 167
+K LR+V +K +EE
Sbjct: 475 -DKNSLLREVESAKKQLEE 492
>gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo
sapiens]
Length = 1202
Score = 40.0 bits (92), Expect = 0.001
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 31 EKEESRREAEKQNYLAEHC--PPLHIPGSMSEVQELCKQLHAKIDAAEEEKYDMEVRVQK 88
+ E+ R+ +++ LAE L ++ EV+ Q A + AEE ++E R+++
Sbjct: 359 QTEDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQ 418
Query: 89 TSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKALLGSKHKVCMDLRANLKQVKKED 148
+LE+ NQ+L R + K R+S D + K L S ++ + L+ + ++
Sbjct: 419 MEAQLEEKNQELQRARQREKMNEEHNKRLS-DTVDKLLSESNERLQLHLKERMAALE--- 474
Query: 149 TEKERDLRDVGDWRKNIEE 167
+K LR+V +K +EE
Sbjct: 475 -DKNSLLREVESAKKQLEE 492
>gi|46852174 kinesin family member 3A [Homo sapiens]
Length = 699
Score = 38.9 bits (89), Expect = 0.002
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 12/150 (8%)
Query: 31 EKEESRREAEKQNYLAEHCPPLHIPGSMSEVQELCKQLHAKIDAAEEEKYDMEVRVQKTS 90
EK + RR +K + P + +++ E K L K+D EEE+ ++K
Sbjct: 403 EKRKKRRGKKKVS-------PDKMIEMQAKIDEERKALETKLDMEEEERNKARAELEKRE 455
Query: 91 KELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKA-----LLGSKHKVCMDLRANLKQVK 145
K+L Q+ L K + + D + KA LL + + R +Q++
Sbjct: 456 KDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKAEEQEKLLEESNMELEERRKRAEQLR 515
Query: 146 KEDTEKERDLRDVGDWRKNIEEKSGMEGRK 175
+E EKE++ D+ + +++E++ + +K
Sbjct: 516 RELEEKEQERLDIEEKYTSLQEEAQGKTKK 545
Score = 30.4 bits (67), Expect = 0.88
Identities = 39/200 (19%), Positives = 85/200 (42%), Gaps = 41/200 (20%)
Query: 2 SQCKKRNRAITARRQHLKSVMLQIAATELEKE------ESRREAEKQNYLAEHCPPLHIP 55
++ +KR + + +Q +S++ +++A LEK+ + +AE+Q L E
Sbjct: 449 AELEKREKDLLKAQQEHQSLLEKLSA--LEKKVIVGGVDLLAKAEEQEKLLEESNM---- 502
Query: 56 GSMSEVQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRV 115
+ E ++ +QL +++ E+E+ D+E + +E + +KL + +
Sbjct: 503 -ELEERRKRAEQLRRELEEKEQERLDIEEKYTSLQEEAQGKTKKL---------KKVWTM 552
Query: 116 RMSADAMLKALLGSKHKVCMDLRANLKQVKKE--------DTEKERDLR----------- 156
M+A + + L + L N++Q+ +E D RD +
Sbjct: 553 LMAAKSEMADLQQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPRDYQEMIENYVHWNE 612
Query: 157 DVGDWRKNIEEKSGMEGRKK 176
D+G+W+ +G RK+
Sbjct: 613 DIGEWQLKCVAYTGNNMRKQ 632
>gi|29171755 PTPRF interacting protein alpha 2 [Homo sapiens]
Length = 1257
Score = 38.9 bits (89), Expect = 0.002
Identities = 38/165 (23%), Positives = 78/165 (47%), Gaps = 7/165 (4%)
Query: 5 KKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHC--PPLHIPGSMSEVQ 62
++ + +I L++ + A + EE R+ +++ LAE + ++ EV+
Sbjct: 351 QRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMRKAETLPEVE 410
Query: 63 ELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAM 122
Q A + AEE ++E R++ +LE+ NQ+L R + K R+S D +
Sbjct: 411 AELAQRIAALTKAEERHGNIEERMRHLEGQLEEKNQELQRARQREKMNEEHNKRLS-DTV 469
Query: 123 LKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEE 167
+ L S ++ + L+ + ++ EK +++ +RKN+EE
Sbjct: 470 DRLLTESNERLQLHLKERMAALE----EKNVLIQESETFRKNLEE 510
Score = 30.0 bits (66), Expect = 1.1
Identities = 27/147 (18%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
Query: 23 LQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQELCKQLHAKIDAAEEEKYDM 82
L+++ + E A Q +A +HI M+ + + H ++ E +
Sbjct: 195 LRVSLERVSALEEELAAANQEIVALREQNVHIQRKMASSEGSTESEH--LEGMEPGQKVH 252
Query: 83 EVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSAD-AMLKALLGSKHKVCMDLRANL 141
E R+ S + D ++ +L+ ++ +M A L + +G + R +L
Sbjct: 253 EKRLSNGSIDSTDETSQIVELQELLEKQNYEMAQMKERLAALSSRVGEVEQEAETARKDL 312
Query: 142 KQVKKEDTEKERDLRDVGDWRKNIEEK 168
+ ++ +T+ +RD+R+ ++++EE+
Sbjct: 313 IKTEEMNTKYQRDIREAMAQKEDMEER 339
>gi|156104908 myosin heavy chain 6 [Homo sapiens]
Length = 1939
Score = 37.4 bits (85), Expect = 0.007
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 24/172 (13%)
Query: 6 KRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQELC 65
K N AI RR +L L+ +E+ E R+ +Q + E E
Sbjct: 1670 KENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQELI--------------ETSERV 1715
Query: 66 KQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKA 125
+ LH++ + +K ME + + E+E+ Q+ + K K+ DA A
Sbjct: 1716 QLLHSQNTSLINQKKKMESDLTQLQSEVEEAVQECRNAEEKAKKA-------ITDA---A 1765
Query: 126 LLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKM 177
++ + K D A+L+++KK + +DL+ D + I K G + +K+
Sbjct: 1766 MMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKL 1817
Score = 30.4 bits (67), Expect = 0.88
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 66 KQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKA 125
K+L K+ + +EK D++++VQ L D ++ L + ++ +A +K
Sbjct: 873 KELEEKMVSLLQEKNDLQLQVQAEQDNLNDAEERC---------DQLIKNKIQLEAKVKE 923
Query: 126 L---LGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIE-EKSGMEGRKKMFESE 181
+ L + ++ +L A ++++ E +E ++D+ D+ +E EK E + K E
Sbjct: 924 MNERLEDEEEMNAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEE 983
Score = 26.9 bits (58), Expect = 9.7
Identities = 38/178 (21%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Query: 29 ELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQELCKQLHAKIDAAEEEKYDMEVRVQK 88
+L+K+E + E L + + E Q ++L +++A + +E
Sbjct: 1081 KLKKKEFDINQQNSKIEDEQVLALQLQKKLKENQARIEELEEELEAERTARAKVEKLRSD 1140
Query: 89 TSKELEDMNQKLFDLRG---------KFKRPPLRRVRMS-ADAMLK-----ALLGSKHKV 133
S+ELE+++++L + G K + +++R +A L+ A L KH
Sbjct: 1141 LSRELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRKKHAD 1200
Query: 134 CM----DLRANLKQVK----KEDTEKERDLRDV-GDWRKNIEEKSGMEGRKKMFESES 182
+ + NL++VK KE +E + +L DV + + I+ K+ +E + E ++
Sbjct: 1201 SVAELGEQIDNLQRVKQKLEKEKSEFKLELDDVTSNMEQIIKAKANLEKVSRTLEDQA 1258
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 37.0 bits (84), Expect = 0.009
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 24/172 (13%)
Query: 6 KRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQELC 65
K N AI RR +L L+ +E+ E R+ +Q + E E
Sbjct: 1668 KENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQELI--------------ETSERV 1713
Query: 66 KQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKA 125
+ LH++ + +K M+ + + E+E+ Q+ + K K+ DA A
Sbjct: 1714 QLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKA-------ITDA---A 1763
Query: 126 LLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKM 177
++ + K D A+L+++KK + +DL+ D + I K G + +K+
Sbjct: 1764 MMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKL 1815
Score = 31.2 bits (69), Expect = 0.51
Identities = 27/120 (22%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 66 KQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKA 125
K+L K+ + +EK D++++VQ L D ++ L + ++ +A +K
Sbjct: 871 KELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERC---------DQLIKNKIQLEAKVKE 921
Query: 126 L---LGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIE-EKSGMEGRKKMFESE 181
+ L + ++ +L A ++++ E +E +RD+ D+ +E EK E + K E
Sbjct: 922 MNERLEDEEEMNAELTAKKRKLEDECSELKRDIDDLELTLAKVEKEKHATENKVKNLTEE 981
Score = 28.1 bits (61), Expect = 4.4
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 31/154 (20%)
Query: 59 SEVQELCKQLHAKIDAAEEE---KYDMEVRVQKT----SKELEDMNQKLFDLRG------ 105
S++Q+ K+L A+I+ EEE + +V+K S+ELE+++++L + G
Sbjct: 1102 SQLQKKLKELQARIEELEEELEAERTARAKVEKLRSDLSRELEEISERLEEAGGATSVQI 1161
Query: 106 ---KFKRPPLRRVRMS-ADAMLK-----ALLGSKHKVCM----DLRANLKQVK----KED 148
K + +++R +A L+ A L KH + + NL++VK KE
Sbjct: 1162 EMNKKREAEFQKMRRDLEEATLQHEATAAALRKKHADSVAELGEQIDNLQRVKQKLEKEK 1221
Query: 149 TEKERDLRDV-GDWRKNIEEKSGMEGRKKMFESE 181
+E + +L DV + + I+ K+ +E + E +
Sbjct: 1222 SEFKLELDDVTSNMEQIIKAKANLEKMCRTLEDQ 1255
>gi|81295816 nasopharyngeal epithelium specific protein 1 [Homo
sapiens]
Length = 551
Score = 37.0 bits (84), Expect = 0.009
Identities = 34/163 (20%), Positives = 72/163 (44%), Gaps = 17/163 (10%)
Query: 19 KSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQELCKQLHAKIDAAEEE 78
K M + A E E+E RRE EK+ + +QE + A+ DA +
Sbjct: 345 KKKMAREAEFEAEQERIRREKEKEI------------ARLRAMQEKAQDYQAEQDALRAK 392
Query: 79 KYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKALLGSKHKVCMDLR 138
+ + EV ++ ++ ++ +K + + ++ L +V A+ + + + LR
Sbjct: 393 R-NQEVADREWRRKEKENARKKMETEAELRKSRLEQVAFKEHALAVQVQRDRDEFERILR 451
Query: 139 ANLKQVKKEDTEKERD----LRDVGDWRKNIEEKSGMEGRKKM 177
A +Q++KE E+E+ L+ + R+ + E E + ++
Sbjct: 452 AQREQIEKERLEEEKKATGRLQHANELRRQVRENQQKEVQNRI 494
>gi|38570058 hypothetical protein LOC80129 [Homo sapiens]
Length = 715
Score = 36.6 bits (83), Expect = 0.012
Identities = 33/176 (18%), Positives = 83/176 (47%), Gaps = 12/176 (6%)
Query: 5 KKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQE- 63
K + + ++ H+ + +IA +LE+E+ R A H ++ + +Q+
Sbjct: 491 KTQKERLESKELHMSLLRQKIA--QLEEEKQARTALVVERDNAHLTIRNLQKKVERLQKE 548
Query: 64 --LCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQ---KLFDLRGKFKRPPLRRVRMS 118
C+ LH ++ A + +++++ + +K +ED+N+ +L ++ K ++ L V+
Sbjct: 549 LNTCRDLHTELKAKLADTNELKIKTLEQTKAIEDLNKSRDQLEKMKEKAEK-KLMSVKSE 607
Query: 119 ADAMLKALLGSKHK---VCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGM 171
D +K + + + + +K +KK E E+ + + D+R+ + + G+
Sbjct: 608 LDTTEHEAKENKERARNMIEVVTSEMKTLKKSLEEAEKREKQLADFREVVSQMLGL 663
Score = 29.6 bits (65), Expect = 1.5
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Query: 75 AEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAM-LKALLGSKHKV 133
A EE YD V T ++L + R + ++ ++ L++ + SK
Sbjct: 17 APEETYDHLSEVPVTREQLNHYRNVAQNARSELAATLVKFECAQSELQDLRSKMLSKEVS 76
Query: 134 CMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKM 177
C +L+A ++ K+ + K L + D + +EE+S K+
Sbjct: 77 CQELKAEMESYKENNARKSSLLTSLRDRVQELEEESAALSTSKI 120
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 36.6 bits (83), Expect = 0.012
Identities = 31/156 (19%), Positives = 71/156 (45%), Gaps = 16/156 (10%)
Query: 29 ELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQELCKQLHAKIDAAEEEKYDMEVRVQK 88
++ +EE RE EK+ E M E +E ++ K+ EE+ ++ E ++Q+
Sbjct: 584 KMREEERMREREKKMREEEEM--------MREQEEKMQEQEEKMQEQEEKMWEQEEKMQE 635
Query: 89 TSKELEDMNQKLFDLRGKF---KRPPLRRVRMSADAMLKALLGSKHKVCMDLRANLKQVK 145
+++ + +K+++ K +R P ++ ++ ++ + + + + + +
Sbjct: 636 QEEKMWEQEEKMWEQEEKMWEQQRLPEQKEKLWEHEKMQ-----EQEKMQEQEEKIWEQE 690
Query: 146 KEDTEKERDLRDVGDWRKNIEEKSGMEGRKKMFESE 181
K + + + + D K EE+S E KKM E E
Sbjct: 691 KMEKKTQEQEKKTWDQEKMREEESMREREKKMREEE 726
Score = 33.1 bits (74), Expect = 0.14
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Query: 31 EKEESRREAEKQNYLAEHCPPLHIPGSMSEVQELCKQLHAKIDAAEEEKYDMEVRVQKTS 90
E+E+ RE EK+ L E M E +E + K+ EE+ + E R+ +
Sbjct: 325 EQEKELREQEKE--LREQKELREQEEQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQE 382
Query: 91 KELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKALLGSKHKVCMDLRANLKQVKKEDTE 150
K++ + QK+ D + R+R + M + + M + + +K+ E
Sbjct: 383 KQMREQEQKMRDQEERMWEQD-ERLREKEERM-------REQEKMWEQVEKMREEKKMQE 434
Query: 151 KERDLRDVGDWRKNIEEKSGMEGRKKMFESE 181
+E+ RD + K EE+ E KKM E E
Sbjct: 435 QEKKTRDQEE--KMQEEERIREREKKMREEE 463
Score = 28.5 bits (62), Expect = 3.3
Identities = 34/188 (18%), Positives = 82/188 (43%), Gaps = 18/188 (9%)
Query: 2 SQCKKRNRAITARRQHLKSVMLQIAATELEKE-----ESRREAEKQNYLAEHCPPLHIPG 56
S+ + + + + + K ++ Q+ L++E E RE EK+ E
Sbjct: 242 SEIQLNVKELKRKLERAKFLLPQVQTNTLQEEMWRQEEELREQEKKIRKQEE-------- 293
Query: 57 SMSEVQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVR 116
M +E ++ K+ EE+ + E R+++ KEL + ++L + + ++ + +
Sbjct: 294 KMWRQEERLREQEGKMREQEEKMWRQEKRLREQEKELREQEKELREQKELREQEEQMQEQ 353
Query: 117 MSADAMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGD--WRKN---IEEKSGM 171
+ + + + L + +K+ E+E+ +RD + W ++ E++ M
Sbjct: 354 EEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERMWEQDERLREKEERM 413
Query: 172 EGRKKMFE 179
++KM+E
Sbjct: 414 REQEKMWE 421
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 36.6 bits (83), Expect = 0.012
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 17/145 (11%)
Query: 15 RQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQELCKQ---LHAK 71
++ L + Q++ E E E++RREA++Q E + E + L K+ L +
Sbjct: 833 QEQLAQLSRQLSGREQELEQARREAQRQVEALER--------AAREKEALAKEHAGLAVQ 884
Query: 72 IDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKALLGSKH 131
+ AAE E + + E E + LF+++ + + RR ++ A+ +ALL +K
Sbjct: 885 LVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEG--QALLLAKE 942
Query: 132 KVCMDLRANLKQV----KKEDTEKE 152
+ +L +Q+ +K +KE
Sbjct: 943 TLTGELAGLRQQIIATQEKASLDKE 967
Score = 33.1 bits (74), Expect = 0.14
Identities = 35/181 (19%), Positives = 77/181 (42%), Gaps = 12/181 (6%)
Query: 6 KRNRAITARRQHLKSVMLQIAATELEKEESRREAEK---QNYLAEHCPPLHIPGSMSEVQ 62
+R A A Q ++ + Q +++ REAE+ Q L E + + E Q
Sbjct: 1123 QREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARD-GLRRELLEAQ 1181
Query: 63 ELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSAD-- 120
++ + +E ++ + + +KE E + + +LR K+ R+ +
Sbjct: 1182 RKLRESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRSAVKKAESERISLKLANE 1241
Query: 121 ------AMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGR 174
A+L+ + K +LR L++V++ E R+L+++ K ++ ++ GR
Sbjct: 1242 DKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQMKMLDSENTRLGR 1301
Query: 175 K 175
+
Sbjct: 1302 E 1302
Score = 31.6 bits (70), Expect = 0.39
Identities = 41/207 (19%), Positives = 79/207 (38%), Gaps = 32/207 (15%)
Query: 6 KRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQELC 65
K + A+ A + V +A EL E A + L ++Q
Sbjct: 576 KTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELR--QEREKLQAAQ 633
Query: 66 KQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGK--------------FKRPP 111
++L + D EEE+ D + +ELE +++L L GK R
Sbjct: 634 EELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRAT 693
Query: 112 LRRVRMSAD-AMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNI----- 165
L+R + A+ A + L ++L ++ +++ E+ + L + +++
Sbjct: 694 LQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKL 753
Query: 166 ----------EEKSGMEGRKKMFESES 182
EEKS ++GR++ E E+
Sbjct: 754 DLNRLVAQLEEEKSALQGRQRQAEQEA 780
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 36.6 bits (83), Expect = 0.012
Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 21/187 (11%)
Query: 2 SQCKKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSEV 61
+Q +K+ + + AR + L+ + A E+ R EA ++ L E L G S
Sbjct: 1151 AQMQKKIKELQARAEELEEELEAERAARARVEKQRAEAARE--LEELSERLEEAGGASAG 1208
Query: 62 Q-ELCKQLHAKIDAAEEEKYDMEVRVQKT-----------SKELEDMNQKLFDLRGKFKR 109
Q E C++ A++ E + +R + T + EL + L +R K ++
Sbjct: 1209 QREGCRKREAELGRLRRELEEAALRHEATVAALRRKQAEGAAELGEQVDSLQRVRQKLEK 1268
Query: 110 PPLRRVRMSADAM------LKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRK 163
+RM D + L S K+C L + K + E +R L D R
Sbjct: 1269 EK-SELRMEVDDLAANVETLTRAKASAEKLCRTYEDQLSEAKIKVEELQRQLADASTQRG 1327
Query: 164 NIEEKSG 170
++ +SG
Sbjct: 1328 RLQTESG 1334
Score = 27.7 bits (60), Expect = 5.7
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 10 AITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIP-GSMSEVQELCKQL 68
A A+RQ L+ + I T+ + + + + +Q+ LA+ H+ S +++ K+L
Sbjct: 914 AAEAKRQELEETHVSI--TQEKNDLALQLQAEQDNLADAEERCHLLIKSKVQLEGKVKEL 971
Query: 69 HAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLR 104
+++ EE D+ R +K E ++ + + DL+
Sbjct: 972 SERLEDEEEVNADLAARRRKLEDECTELKKDIDDLK 1007
>gi|16975496 cortactin binding protein 2 [Homo sapiens]
Length = 1663
Score = 36.6 bits (83), Expect = 0.012
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 23/134 (17%)
Query: 1 MSQCKKRNRAITARRQHLKSVMLQIA-----ATELEKE---ESRREAEKQNYLAEHCPPL 52
+ +CK+ + + Q L+ VM ++ ELE+E E RR E + + +
Sbjct: 175 VKECKQLSGKVIEEAQKLEDVMAKLEEEKKKTNELEEELSAEKRRSTEMEAQMEKQ---- 230
Query: 53 HIPGSMSEVQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPL 112
+SE +QL AK++ E D++ + K K +E + RG +P L
Sbjct: 231 -----LSEFDTEREQLRAKLNREEAHTTDLKEEIDKMRKMIEQLK------RGSDSKPSL 279
Query: 113 RRVRMSADAMLKAL 126
R + D L ++
Sbjct: 280 SLPRKTKDRRLVSI 293
>gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein 3
[Homo sapiens]
Length = 580
Score = 36.2 bits (82), Expect = 0.016
Identities = 32/159 (20%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 14 RRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQELCKQLHAKID 73
R+ L+SV+ + AT+ +K +E+ +Q L H+ G + Q+ +++ +I
Sbjct: 176 RKGELESVLSNVMATQKKKANQFKESFQQVQLERDEYSEHLKGERARWQQRMRKMSQEIC 235
Query: 74 AAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRP-PLRRVRMSADAMLKALLGSKHK 132
++EK Q+ + +E + + L L+ + P P + ++ L+ L +
Sbjct: 236 TLKKEK-------QQDMRRVEKLERSLSKLKNQMAEPLPPEPPAVPSEVELQHLRKELER 288
Query: 133 VCMDLRANLK---QVKKEDTEKERDLRDVGDWRKNIEEK 168
V +L+A +K ++ + +E +R+ + + EE+
Sbjct: 289 VAGELQAQVKNNQRISLLNQRQEERIREQEERLRKQEER 327
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 36.2 bits (82), Expect = 0.016
Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 21/192 (10%)
Query: 3 QCKKRNRAITARRQHLKSVMLQIAATELEKEESRR---EAEKQNYLAEHCPPLHIPGSMS 59
Q NR +HL+SV Q+ T+L +++ R + ++Q + E L + +
Sbjct: 1629 QLSHANRQAAETLKHLRSVQGQLKDTQLHLDDALRGQEDLKEQLAIVERRANL-LQAEVE 1687
Query: 60 EVQELCKQLHAKIDAAEEEKYDMEVRVQ----------KTSKELE----DMNQKLFDLRG 105
E++ +Q AE+E D RVQ T K+LE + ++ D
Sbjct: 1688 ELRATLEQTERARKLAEQELLDSNERVQLLHTQNTSLIHTKKKLETDLMQLQSEVEDASR 1747
Query: 106 KFKRPPLRRVRMSADAMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNI 165
+ + + DA A++ + K D A+L+++KK + +DL+ D + +
Sbjct: 1748 DARNAEEKAKKAITDA---AMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQL 1804
Query: 166 EEKSGMEGRKKM 177
K G + +K+
Sbjct: 1805 ALKGGKKQIQKL 1816
Score = 33.5 bits (75), Expect = 0.10
Identities = 35/163 (21%), Positives = 73/163 (44%), Gaps = 23/163 (14%)
Query: 22 MLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQELCKQLHAKIDAAEEEKYD 81
+L+ A TE E + E +K +++ + K+L K+ +EK D
Sbjct: 840 LLKSAETEKEMATMKEEFQKTK------------DELAKSEAKRKELEEKLVTLVQEKND 887
Query: 82 MEVRVQKTSKELEDMNQKLFDL-RGKFK-RPPLRRVRMSADAMLKALLGSKHKVCMDLRA 139
++++VQ S+ L D ++ L + KF+ ++ V A+ + ++ +L A
Sbjct: 888 LQLQVQAESENLLDAEERCDQLIKAKFQLEAKIKEVTERAE--------DEEEINAELTA 939
Query: 140 NLKQVKKEDTEKERDLRDVGDWRKNIE-EKSGMEGRKKMFESE 181
++++ E +E ++D+ D+ +E EK E + K E
Sbjct: 940 KKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEE 982
>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
sapiens]
Length = 1939
Score = 35.4 bits (80), Expect = 0.027
Identities = 41/182 (22%), Positives = 74/182 (40%), Gaps = 30/182 (16%)
Query: 6 KRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQELC 65
K A+ RR +L ++ LE+ E R+ +Q L + E
Sbjct: 1672 KEQLAMVERRANLMQAEVEELRASLERTERGRKMAEQELL--------------DASERV 1717
Query: 66 KQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKA 125
+ LH + + K +E + + E+ED+ Q+ + K K+ DA A
Sbjct: 1718 QLLHTQNTSLINTKKKLETDISQIQGEMEDIVQEARNAEEKAKKA-------ITDA---A 1767
Query: 126 LLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSG------MEGRKKMFE 179
++ + K D A+L+++KK + +DL+ D + + K G +E R + E
Sbjct: 1768 MMAEELKKEQDTSAHLERMKKNMEQTVKDLQLRLDEAEQLALKGGKKQIQKLEARVRELE 1827
Query: 180 SE 181
SE
Sbjct: 1828 SE 1829
Score = 32.7 bits (73), Expect = 0.18
Identities = 33/164 (20%), Positives = 71/164 (43%), Gaps = 25/164 (15%)
Query: 22 MLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQELCKQLHAKIDAAEEEKYD 81
+L+ A TE E + E EK +++ + K+L K+ +EK D
Sbjct: 843 LLKSAETEKEMANMKEEFEKTKE------------ELAKTEAKRKELEEKMVTLMQEKND 890
Query: 82 MEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKAL---LGSKHKVCMDLR 138
++++VQ + L D ++ L + ++ +A +K + + ++ +L
Sbjct: 891 LQLQVQAEADALADAEERC---------DQLIKTKIQLEAKIKEVTERAEDEEEINAELT 941
Query: 139 ANLKQVKKEDTEKERDLRDVGDWRKNIE-EKSGMEGRKKMFESE 181
A ++++ E +E ++D+ D+ +E EK E + K E
Sbjct: 942 AKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEE 985
Score = 31.6 bits (70), Expect = 0.39
Identities = 29/151 (19%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 33 EESRREAEKQNYLAEHCPPLH-----IPGSMSEVQELC-------KQLHAKIDAAEEEKY 80
++ + E +K N L + L + GS+ + ++LC ++L + A+E
Sbjct: 1012 DDLQMEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLCMDLERAKRKLEGDLKLAQESTM 1071
Query: 81 DMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAM-LKALLGSKHKVCMDLRA 139
D E Q+ +++L+ ++ +L+GK + +++ L+A + + RA
Sbjct: 1072 DTENDKQQLNEKLKKKEFEMSNLQGKIEDEQALAIQLQKKIKELQARIEELEEEIEAERA 1131
Query: 140 NLKQVKKEDTEKERDLRDVGDWRKNIEEKSG 170
+ + +K+ ++ R+L ++ + +EE G
Sbjct: 1132 SRAKAEKQRSDLSRELEEISE---RLEEAGG 1159
Score = 29.3 bits (64), Expect = 2.0
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 66 KQLHAKIDAAEEEKYDMEVRV-QKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLK 124
++ HA A E+ D RV QK KE ++ ++ DL M + K
Sbjct: 1197 RKKHADSVAELGEQIDSLQRVKQKLEKEKSELKMEINDLASN----------METVSKAK 1246
Query: 125 ALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRK 175
A + K+C L L ++K ++ E++R + ++ + + +SG R+
Sbjct: 1247 A---NFEKMCRTLEDQLSEIKTKEEEQQRLINELSAQKARLHTESGEFSRQ 1294
Score = 28.5 bits (62), Expect = 3.3
Identities = 22/111 (19%), Positives = 46/111 (41%), Gaps = 9/111 (8%)
Query: 4 CKKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLA---------EHCPPLHI 54
C RA LK TE +K++ + +K+ + E + +
Sbjct: 1049 CMDLERAKRKLEGDLKLAQESTMDTENDKQQLNEKLKKKEFEMSNLQGKIEDEQALAIQL 1108
Query: 55 PGSMSEVQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRG 105
+ E+Q ++L +I+A + E + S+ELE+++++L + G
Sbjct: 1109 QKKIKELQARIEELEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGG 1159
>gi|38044112 restin isoform b [Homo sapiens]
Length = 1392
Score = 35.0 bits (79), Expect = 0.036
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 15 RQHLKSVMLQIAATELEK--EESRREAEKQNYLAEHCPPLHIPGSMSEVQELCKQLHAKI 72
RQ L++ QI E+EK E S+ + + ++ ++SEV ++ + L ++
Sbjct: 748 RQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKEL 807
Query: 73 DA-------AEEEKYDMEVRVQKT--------------SKELEDMNQKLFDLRGKFKRPP 111
A EE ++ +Q+T S +LE + + L D+ KF+
Sbjct: 808 QILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKD 867
Query: 112 LRRVRM-SADAMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDV 158
R ++ A L+ + K+ D + L ++ E KERD+ ++
Sbjct: 868 EREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEEL 915
>gi|4506751 restin isoform a [Homo sapiens]
Length = 1427
Score = 35.0 bits (79), Expect = 0.036
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 15 RQHLKSVMLQIAATELEK--EESRREAEKQNYLAEHCPPLHIPGSMSEVQELCKQLHAKI 72
RQ L++ QI E+EK E S+ + + ++ ++SEV ++ + L ++
Sbjct: 783 RQQLEAAEKQIKHLEIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQVKETLEKEL 842
Query: 73 DA-------AEEEKYDMEVRVQKT--------------SKELEDMNQKLFDLRGKFKRPP 111
A EE ++ +Q+T S +LE + + L D+ KF+
Sbjct: 843 QILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEAKFREKD 902
Query: 112 LRRVRM-SADAMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDV 158
R ++ A L+ + K+ D + L ++ E KERD+ ++
Sbjct: 903 EREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEEL 950
>gi|238908495 similar to pleckstrin homology domain protein (5V327)
[Homo sapiens]
Length = 506
Score = 34.7 bits (78), Expect = 0.046
Identities = 32/180 (17%), Positives = 77/180 (42%), Gaps = 35/180 (19%)
Query: 3 QCKKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQ 62
+ ++ N+ + A +Q + V+ ++ +E+E+ +RE E L C + V+
Sbjct: 186 ELERLNQVLEAEKQQFEEVVQEL---RMEQEQIKRELE----LTARC--------LKGVE 230
Query: 63 ELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAM 122
+ K+L ++ ++ ++ + +KT + LE+ L L + ++PP
Sbjct: 231 QEKKELRHLTESLQQTLEELSIEKKKTLEMLEENENHLQTLANQSEQPPPS--------- 281
Query: 123 LKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKMFESES 182
G H + ++Q+ +E E+ +++ N E +E ++ + S+S
Sbjct: 282 -----GGLHSNLRQIEEKMQQLLEEKLLAEKRMKE------NEERSRALEEEREFYSSQS 330
>gi|13540600 nudE nuclear distribution gene E homolog (A.
nidulans)-like 1 isoform B [Homo sapiens]
Length = 345
Score = 34.7 bits (78), Expect = 0.046
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 11/98 (11%)
Query: 3 QCKKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQ 62
Q ++RNR + A Q LK ++ A + + E ++ KQ + E +S+ +
Sbjct: 57 QAEQRNRDLQADNQRLK---YEVEALKEKLEHQYAQSYKQVSVLED--------DLSQTR 105
Query: 63 ELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKL 100
+ +QLH + E+ D+E + T LED Q+L
Sbjct: 106 AIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRL 143
>gi|71284108 nudE nuclear distribution gene E homolog (A.
nidulans)-like 1 isoform A [Homo sapiens]
Length = 328
Score = 34.7 bits (78), Expect = 0.046
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 11/98 (11%)
Query: 3 QCKKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQ 62
Q ++RNR + A Q LK ++ A + + E ++ KQ + E +S+ +
Sbjct: 57 QAEQRNRDLQADNQRLK---YEVEALKEKLEHQYAQSYKQVSVLED--------DLSQTR 105
Query: 63 ELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKL 100
+ +QLH + E+ D+E + T LED Q+L
Sbjct: 106 AIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRL 143
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 34.7 bits (78), Expect = 0.046
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 66 KQLHAKIDAAEEEKYDMEVRV-QKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLK 124
++ HA A E+ D RV QK KE +M ++ DL + +
Sbjct: 1197 RKKHADSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNMET-------------VS 1243
Query: 125 ALLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRK 175
G+ K+C L L ++K ++ E++R + D+ R ++ +SG R+
Sbjct: 1244 KAKGNLEKMCRALEDQLSEIKTKEEEQQRLINDLTAQRARLQTESGEYSRQ 1294
Score = 34.3 bits (77), Expect = 0.061
Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 24/172 (13%)
Query: 6 KRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQELC 65
K A+ RR +L ++ LE+ E R+ +Q L + E
Sbjct: 1672 KEQLAMVERRANLLQAEIEELRATLEQTERSRKIAEQELL--------------DASERV 1717
Query: 66 KQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKA 125
+ LH + + K +E + + E+ED+ Q+ + K K+ DA A
Sbjct: 1718 QLLHTQNTSLINTKKKLETDISQIQGEMEDIIQEARNAEEKAKKA-------ITDA---A 1767
Query: 126 LLGSKHKVCMDLRANLKQVKKEDTEKERDLRDVGDWRKNIEEKSGMEGRKKM 177
++ + K D A+L+++KK + +DL+ D + + K G + +K+
Sbjct: 1768 MMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQLALKGGKKQIQKL 1819
Score = 33.1 bits (74), Expect = 0.14
Identities = 33/164 (20%), Positives = 71/164 (43%), Gaps = 25/164 (15%)
Query: 22 MLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQELCKQLHAKIDAAEEEKYD 81
+L+ A TE E + E EK +++ + K+L K+ +EK D
Sbjct: 843 LLKSAETEKEMANMKEEFEKTKE------------ELAKTEAKRKELEEKMVTLMQEKND 890
Query: 82 MEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKAL---LGSKHKVCMDLR 138
++++VQ + L D ++ L + ++ +A +K + + ++ +L
Sbjct: 891 LQLQVQAEADSLADAEERC---------DQLIKTKIQLEAKIKEVTERAEDEEEINAELT 941
Query: 139 ANLKQVKKEDTEKERDLRDVGDWRKNIE-EKSGMEGRKKMFESE 181
A ++++ E +E ++D+ D+ +E EK E + K E
Sbjct: 942 AKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEE 985
Score = 32.0 bits (71), Expect = 0.30
Identities = 34/162 (20%), Positives = 70/162 (43%), Gaps = 15/162 (9%)
Query: 5 KKRNRAITARRQHLKSVMLQIAATELEKEESRREAEKQNYLAEH----CPPL-----HIP 55
KK + + +H+++V + A+ E K+ + E E E C L +
Sbjct: 1395 KKLAQRLQDAEEHVEAVNAKCASLEKTKQRLQNEVEDLMIDVERTNAACAALDKKQRNFD 1454
Query: 56 GSMSEVQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRV 115
++E ++ C++ HA+++A+++E + + K E+ +L L KR
Sbjct: 1455 KILAEWKQKCEETHAELEASQKESRSLSTELFKIKNAYEESLDQLETL----KRENKNLQ 1510
Query: 116 RMSADAMLKALLGSKHKVCMDLRANLKQVKKEDTEKERDLRD 157
+ +D + G K +L KQV++E +E + L +
Sbjct: 1511 QEISDLTEQIAEGGKR--IHELEKIKKQVEQEKSELQAALEE 1550
Score = 30.0 bits (66), Expect = 1.1
Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 20/165 (12%)
Query: 29 ELEKEESRREAEKQNYLAEHCPPLHIPGSMSEVQELCKQLHAKIDAAEEEKYDMEVRVQK 88
+L+K+E + E + + + E+Q ++L +I+A + E +
Sbjct: 1083 KLKKKEFEMSGLQSKIEDEQALGMQLQKKIKELQARIEELEEEIEAERASRAKAEKQRSD 1142
Query: 89 TSKELEDMNQKLFDLRG---------KFKRPPLRRVRMS-ADAMLK-----ALLGSKHKV 133
S+ELE+++++L + G K + +++R +A L+ A L KH
Sbjct: 1143 LSRELEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLEEATLQHEATAATLRKKHAD 1202
Query: 134 CM----DLRANLKQVK-KEDTEKERDLRDVGDWRKNIEEKSGMEG 173
+ + NL++VK K + EK ++ D N+E S +G
Sbjct: 1203 SVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNMETVSKAKG 1247
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.128 0.352
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,612,054
Number of Sequences: 37866
Number of extensions: 275525
Number of successful extensions: 2081
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 264
Number of HSP's that attempted gapping in prelim test: 1640
Number of HSP's gapped (non-prelim): 687
length of query: 182
length of database: 18,247,518
effective HSP length: 96
effective length of query: 86
effective length of database: 14,612,382
effective search space: 1256664852
effective search space used: 1256664852
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.