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Search of human proteins with 224809582
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|224809582 RAP1 GTPase activating protein isoform c [Homo
sapiens]
(663 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|224809582 RAP1 GTPase activating protein isoform c [Homo sapi... 1343 0.0
gi|224809578 RAP1 GTPase activating protein isoform a [Homo sapi... 1343 0.0
gi|224809573 RAP1 GTPase activating protein isoform b [Homo sapi... 1303 0.0
gi|156086724 GTPase activating Rap/RanGAP domain-like 4 isoform ... 642 0.0
gi|156086740 GTPase activating Rap/RanGAP domain-like 4 isoform ... 624 e-179
gi|71143119 signal-induced proliferation-associated 1 like 3 [Ho... 224 2e-58
gi|7662126 signal-induced proliferation-associated 1 like 1 [Hom... 222 1e-57
gi|112421013 signal-induced proliferation-associated 1 like 2 [H... 221 2e-57
gi|207448705 GTPase activating Rap/RanGAP domain-like 3 [Homo sa... 211 2e-54
gi|206725526 signal-induced proliferation-associated protein 1 [... 210 3e-54
gi|206725523 signal-induced proliferation-associated protein 1 [... 210 3e-54
gi|118600961 akt substrate AS250 [Homo sapiens] 82 2e-15
gi|51230412 GTPase activating Rap/RanGAP domain-like 1 isoform 2... 77 5e-14
gi|51226124 GTPase activating Rap/RanGAP domain-like 1 isoform 1... 77 5e-14
gi|116256350 tuberous sclerosis 2 isoform 4 [Homo sapiens] 73 7e-13
gi|116256352 tuberous sclerosis 2 isoform 1 [Homo sapiens] 73 7e-13
gi|167412124 tuberous sclerosis 2 isoform 5 [Homo sapiens] 73 7e-13
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 44 5e-04
gi|113415504 PREDICTED: similar to ribonucleic acid binding prot... 43 0.001
gi|169166499 PREDICTED: similar to ribonucleic acid binding prot... 43 0.001
gi|113415498 PREDICTED: similar to ribonucleic acid binding prot... 43 0.001
gi|88973230 PREDICTED: similar to ribonucleic acid binding prote... 43 0.001
gi|169166609 PREDICTED: similar to ribonucleic acid binding prot... 42 0.002
gi|113415994 PREDICTED: similar to ribonucleic acid binding prot... 42 0.002
gi|6857826 RNA-binding protein S1, serine-rich domain [Homo sapi... 42 0.002
gi|18379334 RNA-binding protein S1, serine-rich domain [Homo sap... 42 0.002
gi|29570782 additional sex combs like 1 [Homo sapiens] 40 0.005
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 40 0.007
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 40 0.009
gi|20070163 voltage-dependent calcium channel alpha 1G subunit i... 39 0.015
>gi|224809582 RAP1 GTPase activating protein isoform c [Homo
sapiens]
Length = 663
Score = 1343 bits (3476), Expect = 0.0
Identities = 663/663 (100%), Positives = 663/663 (100%)
Query: 1 MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN 60
MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN
Sbjct: 1 MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN 60
Query: 61 HEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDV 120
HEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDV
Sbjct: 61 HEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDV 120
Query: 121 IGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRL 180
IGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRL
Sbjct: 121 IGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRL 180
Query: 181 IVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR 240
IVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR
Sbjct: 181 IVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR 240
Query: 241 GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDE 300
GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDE
Sbjct: 241 GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDE 300
Query: 301 NTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPE 360
NTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPE
Sbjct: 301 NTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPE 360
Query: 361 FQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMEN 420
FQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMEN
Sbjct: 361 FQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMEN 420
Query: 421 GSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLIV 480
GSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLIV
Sbjct: 421 GSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLIV 480
Query: 481 PGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQ 540
PGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQ
Sbjct: 481 PGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQ 540
Query: 541 SSPEMPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGT 600
SSPEMPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGT
Sbjct: 541 SSPEMPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGT 600
Query: 601 PHKRDSFIYSTWLEDSVSTTSGGSSPGPSRSPHPDAGKLGDPACPEIKIQLEASEQHMPQ 660
PHKRDSFIYSTWLEDSVSTTSGGSSPGPSRSPHPDAGKLGDPACPEIKIQLEASEQHMPQ
Sbjct: 601 PHKRDSFIYSTWLEDSVSTTSGGSSPGPSRSPHPDAGKLGDPACPEIKIQLEASEQHMPQ 660
Query: 661 LGC 663
LGC
Sbjct: 661 LGC 663
>gi|224809578 RAP1 GTPase activating protein isoform a [Homo
sapiens]
Length = 727
Score = 1343 bits (3476), Expect = 0.0
Identities = 663/663 (100%), Positives = 663/663 (100%)
Query: 1 MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN 60
MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN
Sbjct: 65 MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN 124
Query: 61 HEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDV 120
HEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDV
Sbjct: 125 HEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDV 184
Query: 121 IGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRL 180
IGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRL
Sbjct: 185 IGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRL 244
Query: 181 IVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR 240
IVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR
Sbjct: 245 IVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR 304
Query: 241 GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDE 300
GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDE
Sbjct: 305 GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDE 364
Query: 301 NTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPE 360
NTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPE
Sbjct: 365 NTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPE 424
Query: 361 FQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMEN 420
FQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMEN
Sbjct: 425 FQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMEN 484
Query: 421 GSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLIV 480
GSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLIV
Sbjct: 485 GSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLIV 544
Query: 481 PGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQ 540
PGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQ
Sbjct: 545 PGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQ 604
Query: 541 SSPEMPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGT 600
SSPEMPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGT
Sbjct: 605 SSPEMPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGT 664
Query: 601 PHKRDSFIYSTWLEDSVSTTSGGSSPGPSRSPHPDAGKLGDPACPEIKIQLEASEQHMPQ 660
PHKRDSFIYSTWLEDSVSTTSGGSSPGPSRSPHPDAGKLGDPACPEIKIQLEASEQHMPQ
Sbjct: 665 PHKRDSFIYSTWLEDSVSTTSGGSSPGPSRSPHPDAGKLGDPACPEIKIQLEASEQHMPQ 724
Query: 661 LGC 663
LGC
Sbjct: 725 LGC 727
>gi|224809573 RAP1 GTPase activating protein isoform b [Homo
sapiens]
Length = 681
Score = 1303 bits (3372), Expect = 0.0
Identities = 655/689 (95%), Positives = 655/689 (95%), Gaps = 34/689 (4%)
Query: 1 MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN 60
MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN
Sbjct: 1 MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN 60
Query: 61 HEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDV 120
HEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDV
Sbjct: 61 HEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDV 120
Query: 121 IGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRL 180
IGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRL
Sbjct: 121 IGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRL 180
Query: 181 IVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR 240
IVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR
Sbjct: 181 IVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR 240
Query: 241 GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDE 300
GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDE
Sbjct: 241 GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDE 300
Query: 301 NTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPE 360
NTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPE
Sbjct: 301 NTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPE 360
Query: 361 FQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMEN 420
FQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMEN
Sbjct: 361 FQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMEN 420
Query: 421 GSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGI---- 476
GSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGI
Sbjct: 421 GSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLLI 480
Query: 477 ----------------------SLIVPGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRE 514
SLIVPGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRE
Sbjct: 481 PGKSASRFGRRGSAIGIGTVEESLIVPGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRE 540
Query: 515 SPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASS 574
SPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASS
Sbjct: 541 SPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASS 600
Query: 575 FASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGSSPGPSRSPHP 634
FASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGSS P
Sbjct: 601 FASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGSS--------P 652
Query: 635 DAGKLGDPACPEIKIQLEASEQHMPQLGC 663
DAGKLGDPACPEIKIQLEASEQHMPQLGC
Sbjct: 653 DAGKLGDPACPEIKIQLEASEQHMPQLGC 681
>gi|156086724 GTPase activating Rap/RanGAP domain-like 4 isoform 1
[Homo sapiens]
Length = 730
Score = 642 bits (1655), Expect = 0.0
Identities = 348/652 (53%), Positives = 451/652 (69%), Gaps = 32/652 (4%)
Query: 1 MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN 60
M+EKMQG +++EQ+ P P K ++DYIPYPS+ EV+ + GP+P ++LPQFGGYWIE
Sbjct: 62 MLEKMQGIKLEEQK---PGPQKNKDDYIPYPSIDEVVEKGGPYPQVILPQFGGYWIEDPE 118
Query: 61 H---------EITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGH 111
+ I E + L T KLEC AR YR+HFLGK+H N+Y ++LG+
Sbjct: 119 NVGTPTSLGSSICEEEEEDNLSPNTFGYKLECKGEARAYRRHFLGKDHLNFYCTGSSLGN 178
Query: 112 LVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYP 171
L+ S+K + E+LR++LR+K +T H+ IP++ L++ P+V Q+AK C+D RF P
Sbjct: 179 LILSVKCEEAEGIEYLRVILRSKLKTVHERIPLAGLSKLPSVPQIAKAFCDDAVGLRFNP 238
Query: 172 VLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKV 231
VLYPKAS++IV++DEH ++N FKFGVIYQK QT EEELF NEESPAF EFL+ LG +
Sbjct: 239 VLYPKASQMIVSYDEHEVNNTFKFGVIYQKARQTLEEELFGNNEESPAFKEFLDLLGDTI 298
Query: 232 KLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGND 291
LQDFKGFRGGLDVTHGQTG ESVY FR++EIMFHVSTKLP+T+GDAQQLQRKRHIGND
Sbjct: 299 TLQDFKGFRGGLDVTHGQTGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGND 358
Query: 292 IVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPD 351
IVA++FQ+ENTPFVPDMIASNFLHAY+VVQ E G + P YKVSVTAR+DVP FGPPLP
Sbjct: 359 IVAIIFQEENTPFVPDMIASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPS 418
Query: 352 PAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGL 411
P VF+KGPEF+EFLLTKL NAE AC K++KFAKLE+RTRAALL+ L++ELH H+Q+M+GL
Sbjct: 419 PPVFQKGPEFREFLLTKLTNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGL 478
Query: 412 GGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNT--VSTSHSGSFAPNNPD 469
G +EDK ENG G GGF ESFKR IR RS SM+ M KK ++ + S SG + N+ +
Sbjct: 479 GPEEDKFENG-GHGGFLESFKRAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSME 537
Query: 470 LAKAAGISLIV------PGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTP 523
+ K +V +SP +++SG F + G E + + + +S + KTP
Sbjct: 538 VTKTTFSPPVVAATVKNQSRSPIKRRSGLFPRLHT---GSEGQGDSRARCDSTSSTPKTP 594
Query: 524 DSGHVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETE 583
D GH SQE KSE SS SSPE+ N+ + + E + SRSSSS SS +S E E
Sbjct: 595 DGGHSSQEIKSETSSNPSSPEI--CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGEGE 652
Query: 584 GVDGEDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGSSPGP---SRSP 632
++ D+G S S+ +P K++ F+YS S + S G++ P SRSP
Sbjct: 653 AMEEGDSG-GSQPSTTSPFKQEVFVYSP--SPSSESPSLGAAATPIIMSRSP 701
>gi|156086740 GTPase activating Rap/RanGAP domain-like 4 isoform 2
[Homo sapiens]
Length = 715
Score = 624 bits (1610), Expect = e-179
Identities = 338/631 (53%), Positives = 436/631 (69%), Gaps = 29/631 (4%)
Query: 22 KTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTNH---------EITSIPETEPL 72
K ++DYIPYPS+ EV+ + GP+P ++LPQFGGYWIE + I E + L
Sbjct: 65 KMQDDYIPYPSIDEVVEKGGPYPQVILPQFGGYWIEDPENVGTPTSLGSSICEEEEEDNL 124
Query: 73 QSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVIGDQEHLRLLLR 132
T KLEC AR YR+HFLGK+H N+Y ++LG+L+ S+K + E+LR++LR
Sbjct: 125 SPNTFGYKLECKGEARAYRRHFLGKDHLNFYCTGSSLGNLILSVKCEEAEGIEYLRVILR 184
Query: 133 TKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRLIVTFDEHVISNN 192
+K +T H+ IP++ L++ P+V Q+AK C+D RF PVLYPKAS++IV++DEH ++N
Sbjct: 185 SKLKTVHERIPLAGLSKLPSVPQIAKAFCDDAVGLRFNPVLYPKASQMIVSYDEHEVNNT 244
Query: 193 FKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHGQTGT 252
FKFGVIYQK QT EEELF NEESPAF EFL+ LG + LQDFKGFRGGLDVTHGQTG
Sbjct: 245 FKFGVIYQKARQTLEEELFGNNEESPAFKEFLDLLGDTITLQDFKGFRGGLDVTHGQTGV 304
Query: 253 ESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENTPFVPDMIASN 312
ESVY FR++EIMFHVSTKLP+T+GDAQQLQRKRHIGNDIVA++FQ+ENTPFVPDMIASN
Sbjct: 305 ESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMIASN 364
Query: 313 FLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKLINA 372
FLHAY+VVQ E G + P YKVSVTAR+DVP FGPPLP P VF+KGPEF+EFLLTKL NA
Sbjct: 365 FLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKLTNA 424
Query: 373 EYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMENGSGGGGFFESFK 432
E AC K++KFAKLE+RTRAALL+ L++ELH H+Q+M+GLG +EDK ENG G GGF ESFK
Sbjct: 425 ENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENG-GHGGFLESFK 483
Query: 433 RVIRSRSQSMDAMGLSNKKPNT--VSTSHSGSFAPNNPDLAKAAGISLIV------PGKS 484
R IR RS SM+ M KK ++ + S SG + N+ ++ K +V +S
Sbjct: 484 RAIRVRSHSMETMVGGQKKSHSGGIPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQSRS 543
Query: 485 PTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPE 544
P +++SG F + G E + + + +S + KTPD GH SQE KSE SS SSPE
Sbjct: 544 PIKRRSGLFPRLHT---GSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPE 600
Query: 545 MPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKR 604
+ N+ + + E + SRSSSS SS +S E E ++ D+G S S+ +P K+
Sbjct: 601 I--CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGEGEAMEEGDSG-GSQPSTTSPFKQ 657
Query: 605 DSFIYSTWLEDSVSTTSGGSSPGP---SRSP 632
+ F+YS S + S G++ P SRSP
Sbjct: 658 EVFVYSP--SPSSESPSLGAAATPIIMSRSP 686
>gi|71143119 signal-induced proliferation-associated 1 like 3 [Homo
sapiens]
Length = 1781
Score = 224 bits (572), Expect = 2e-58
Identities = 128/338 (37%), Positives = 186/338 (55%), Gaps = 33/338 (9%)
Query: 87 ARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVI------GDQEHLRLLLRTK------ 134
AR Y+ +F+GKEH NY+ +D LG + S+K + + G Q R++ RT+
Sbjct: 501 ARYYQDYFVGKEHANYFGVDEKLGPVAVSIKREKLEDHKEHGPQYQYRIIFRTRELITLR 560
Query: 135 ---------CRTYHDV---IPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRLIV 182
T H +P+ E+ V+ + C + ++ PK + ++
Sbjct: 561 GSILEDATPTATKHGTGRGLPLKDALEY--VIPELNIHCLRLALNT------PKVTEQLL 612
Query: 183 TFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGG 242
DE + K G++Y K GQ+SEEE+++ E PAF EFL +G+KV L+ F +
Sbjct: 613 KLDEQGLCRKHKVGILYCKAGQSSEEEMYNNEEAGPAFEEFLSLIGEKVCLKGFTKYAAQ 672
Query: 243 LDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENT 302
LDV TGT S+Y +++ EIMFHVST LPYT + QQL RKRHIGNDIV ++FQ+
Sbjct: 673 LDVKTDSTGTHSLYTMYQDYEIMFHVSTLLPYTPNNRQQLLRKRHIGNDIVTIIFQEPGA 732
Query: 303 -PFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEF 361
PF P I S+F H +++V+ D Y ++VT D P FGPP+P FRK F
Sbjct: 733 LPFTPKNIRSHFQHVFIIVRVHNPCTDNVCYSMAVTRSKDAPPFGPPIPSGTTFRKSDVF 792
Query: 362 QEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYE 399
++FLL K+INAE A +K++KF + RTR L+ L E
Sbjct: 793 RDFLLAKVINAENAAHKSDKFHTMATRTRQEYLKDLAE 830
>gi|7662126 signal-induced proliferation-associated 1 like 1 [Homo
sapiens]
Length = 1804
Score = 222 bits (565), Expect = 1e-57
Identities = 128/331 (38%), Positives = 185/331 (55%), Gaps = 17/331 (5%)
Query: 87 ARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVI------GDQEHLRLLLRT------K 134
A YRK F KEH+NY+ D LG + S++ + G + R++ RT +
Sbjct: 489 AYYYRKFFYQKEHWNYFGADENLGPVAVSIRREKPDEMKENGSPYNYRIIFRTSELMTLR 548
Query: 135 CRTYHDVIPISCLTEFPNVVQMAKL---VCEDVNVDRFYPVLY-PKASRLIVTFDEHVIS 190
D IP + + + ++ V ++NV PK + ++ DE ++
Sbjct: 549 GSVLEDAIPSTAKHSTARGLPLKEVLEHVVPELNVQCLRLAFNTPKVTEQLMKLDEQGLN 608
Query: 191 NNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHGQT 250
K G++Y K GQ++EEE+++ PAF EFL+ LG++V+L+ F+ +R LD T
Sbjct: 609 YQQKVGIMYCKAGQSTEEEMYNNESAGPAFEEFLQLLGERVRLKGFEKYRAQLDTKTDST 668
Query: 251 GTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENT-PFVPDMI 309
GT S+Y +++ EIMFHVST LPYT + QQL RKRHIGNDIV +VFQ+ PF P I
Sbjct: 669 GTHSLYTTYKDYEIMFHVSTMLPYTPNNKQQLLRKRHIGNDIVTIVFQEPGAQPFSPKNI 728
Query: 310 ASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKL 369
S+F H +V+V+ D Y V+VT DVP FGPP+P F K F++FLL K+
Sbjct: 729 RSHFQHVFVIVRVHNPCSDSVCYSVAVTRSRDVPSFGPPIPKGVTFPKSNVFRDFLLAKV 788
Query: 370 INAEYACYKAEKFAKLEERTRAALLETLYEE 400
INAE A +K+EKF + RTR L+ L E+
Sbjct: 789 INAENAAHKSEKFRAMATRTRQEYLKDLAEK 819
>gi|112421013 signal-induced proliferation-associated 1 like 2 [Homo
sapiens]
Length = 1722
Score = 221 bits (563), Expect = 2e-57
Identities = 132/332 (39%), Positives = 182/332 (54%), Gaps = 20/332 (6%)
Query: 87 ARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVI-------GDQEHLRLLLRTKCRT-- 137
A YRK F GKEH NY+ +D LG + S++ + + G Q + R+ RT T
Sbjct: 484 AYYYRKFFYGKEHQNYFGIDENLGPVAVSIRREKVEDAKEKEGSQFNYRVAFRTSELTTL 543
Query: 138 ----YHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLY-----PKASRLIVTFDEHV 188
D IP + + + K V E V + L PK S ++ DE
Sbjct: 544 RGAILEDAIPSTARHGTARGLPL-KEVLEYVIPELSIQCLRQASNSPKVSEQLLKLDEQG 602
Query: 189 ISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHG 248
+S K G++Y K GQ++EEE+++ PAF EFL+ LGQ+V+L+ F +R LD
Sbjct: 603 LSFQHKIGILYCKAGQSTEEEMYNNETAGPAFEEFLDLLGQRVRLKGFSKYRAQLDNKTD 662
Query: 249 QTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENT-PFVPD 307
TGT S+Y +++ E+MFHVST LPY + QQL RKRHIGNDIV +VFQ+ PF P
Sbjct: 663 STGTHSLYTTYKDYELMFHVSTLLPYMPNNRQQLLRKRHIGNDIVTIVFQEPGALPFTPK 722
Query: 308 MIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLT 367
I S+F H +V+V+ + Y V V+ DVP FGPP+P F K F++FLL
Sbjct: 723 SIRSHFQHVFVIVKVHNPCTENVCYSVGVSRSKDVPPFGPPIPKGVTFPKSAVFRDFLLA 782
Query: 368 KLINAEYACYKAEKFAKLEERTRAALLETLYE 399
K+INAE A +K+EKF + RTR L+ L E
Sbjct: 783 KVINAENAAHKSEKFRAMATRTRQEYLKDLAE 814
>gi|207448705 GTPase activating Rap/RanGAP domain-like 3 [Homo
sapiens]
Length = 1013
Score = 211 bits (536), Expect = 2e-54
Identities = 129/336 (38%), Positives = 188/336 (55%), Gaps = 20/336 (5%)
Query: 77 TKVKLECNPT--ARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVIGDQE--HLRLLLR 132
T V LE NP R Y K+FLG+ H NY DA S+ +Q R +L
Sbjct: 85 TDVHLE-NPEYHTRWYFKYFLGQVHQNYIGNDAEKSPFFLSVTLSDQNNQRVPQYRAILW 143
Query: 133 TKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYP----VLYPKASRLIVTFDEHV 188
K T +P S P K + +N+D+F + +P+ + ++ +E
Sbjct: 144 RKTGTQKICLPYS-----PTKTLSVKSILSAMNLDKFEKGPREIFHPEIQKDLLVLEEQE 198
Query: 189 ISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHG 248
S NFKFGV++ K GQ +++E+FS S F +FL LG + L+ + G+RGGLD +
Sbjct: 199 GSVNFKFGVLFAKDGQLTDDEMFSNEIGSEPFQKFLNLLGDTITLKGWTGYRGGLDTKND 258
Query: 249 QTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQ--DENTP-FV 305
TG SVY ++ EIMFHVST LPY++ + QQ++RKRHIGNDIV +VFQ +E++P F
Sbjct: 259 TTGIHSVYTVYQGHEIMFHVSTMLPYSKENKQQVERKRHIGNDIVTIVFQEGEESSPAFK 318
Query: 306 PDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFL 365
P MI S+F H + +V+ + Y++ + + + VP FGPPLP P VF EF++FL
Sbjct: 319 PSMIRSHFTHIFALVRYNQQNDN---YRLKIFSEESVPLFGPPLPTPPVFTDHQEFRDFL 375
Query: 366 LTKLINAEYACYKAEKFAKLEERTRAALLETLYEEL 401
L KLIN E A + FA+ RT L+ +L+++L
Sbjct: 376 LVKLINGEKATLETPTFAQKRRRTLDMLIRSLHQDL 411
>gi|206725526 signal-induced proliferation-associated protein 1
[Homo sapiens]
Length = 1042
Score = 210 bits (535), Expect = 3e-54
Identities = 132/342 (38%), Positives = 185/342 (54%), Gaps = 14/342 (4%)
Query: 70 EPLQSPTTKVKLE-CNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVI-----GD 123
E Q+ T+ LE + A YRK+F GKEH N++ +D +LG + SL+ + G
Sbjct: 198 EEPQNRTSAYSLEHADLGAGYYRKYFYGKEHQNFFGMDESLGPVAVSLRREEKEGSGGGT 257
Query: 124 QEHLRLLLRT-KCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLY-----PKA 177
R+++RT + RT I L P + + E V L PK
Sbjct: 258 LHSYRVIVRTTQLRTLRGTISEDALPPGPPRGLSPRKLLEHVAPQLSPSCLRLGSASPKV 317
Query: 178 SRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFK 237
R ++T DE V+S K G++Y + GQ SEEE+++ E PAF++FL LG V+L+ F+
Sbjct: 318 PRTLLTLDEQVLSFQRKVGILYCRAGQGSEEEMYNNQEAGPAFMQFLTLLGDVVRLKGFE 377
Query: 238 GFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVF 297
+R LD TGT S+Y +++ EIMFHVST LPYT + QQL RKRHIGNDIV +VF
Sbjct: 378 SYRAQLDTKTDSTGTHSLYTTYQDHEIMFHVSTMLPYTPNNQQQLLRKRHIGNDIVTIVF 437
Query: 298 QDENT-PFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLP-DPAVF 355
Q+ + PF P I S+F H ++VV+A Y+V+V+ D P FGP LP F
Sbjct: 438 QEPGSKPFCPTTIRSHFQHVFLVVRAHTPCTPHTTYRVAVSRTQDTPAFGPALPAGGGPF 497
Query: 356 RKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETL 397
+F+ FLL K +N E A A +F + RTR L+ L
Sbjct: 498 AANADFRAFLLAKALNGEQAAGHARQFHAMATRTRQQYLQDL 539
>gi|206725523 signal-induced proliferation-associated protein 1
[Homo sapiens]
Length = 1042
Score = 210 bits (535), Expect = 3e-54
Identities = 132/342 (38%), Positives = 185/342 (54%), Gaps = 14/342 (4%)
Query: 70 EPLQSPTTKVKLE-CNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVI-----GD 123
E Q+ T+ LE + A YRK+F GKEH N++ +D +LG + SL+ + G
Sbjct: 198 EEPQNRTSAYSLEHADLGAGYYRKYFYGKEHQNFFGMDESLGPVAVSLRREEKEGSGGGT 257
Query: 124 QEHLRLLLRT-KCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLY-----PKA 177
R+++RT + RT I L P + + E V L PK
Sbjct: 258 LHSYRVIVRTTQLRTLRGTISEDALPPGPPRGLSPRKLLEHVAPQLSPSCLRLGSASPKV 317
Query: 178 SRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFK 237
R ++T DE V+S K G++Y + GQ SEEE+++ E PAF++FL LG V+L+ F+
Sbjct: 318 PRTLLTLDEQVLSFQRKVGILYCRAGQGSEEEMYNNQEAGPAFMQFLTLLGDVVRLKGFE 377
Query: 238 GFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVF 297
+R LD TGT S+Y +++ EIMFHVST LPYT + QQL RKRHIGNDIV +VF
Sbjct: 378 SYRAQLDTKTDSTGTHSLYTTYQDHEIMFHVSTMLPYTPNNQQQLLRKRHIGNDIVTIVF 437
Query: 298 QDENT-PFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLP-DPAVF 355
Q+ + PF P I S+F H ++VV+A Y+V+V+ D P FGP LP F
Sbjct: 438 QEPGSKPFCPTTIRSHFQHVFLVVRAHTPCTPHTTYRVAVSRTQDTPAFGPALPAGGGPF 497
Query: 356 RKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETL 397
+F+ FLL K +N E A A +F + RTR L+ L
Sbjct: 498 AANADFRAFLLAKALNGEQAAGHARQFHAMATRTRQQYLQDL 539
>gi|118600961 akt substrate AS250 [Homo sapiens]
Length = 1873
Score = 81.6 bits (200), Expect = 2e-15
Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 19/234 (8%)
Query: 176 KASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQD 235
K R + D K V Y GQ + + S S A+ +F+ LG +V L
Sbjct: 1630 KLLRELKNLDSRQCRETHKIAVFYIAEGQEDKCSILSNERGSQAYEDFVAGLGWEVDLST 1689
Query: 236 FKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAV 295
GF GGL +G TG + Y E++FHVST++P ++ D ++ RH+GND V +
Sbjct: 1690 HCGFMGGLQ-RNGSTGQTAPYYATSTVEVIFHVSTRMP-SDSDDSLTKKLRHLGNDEVHI 1747
Query: 296 VFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVF 355
V+ + + + +I + F +++ ++ +++T + +VPFFGP V
Sbjct: 1748 VWSEHSRDYRRGIIPTAFGDVSIIIYP----MKNHMFFIAITKKPEVPFFGPLFDGAIVS 1803
Query: 356 RKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMM 409
K LL L+ A C A + K L ++ YEE ++ ++++
Sbjct: 1804 GK-------LLPSLVCA--TCINASRAVK----CLIPLYQSFYEERALYLEAII 1844
>gi|51230412 GTPase activating Rap/RanGAP domain-like 1 isoform 2
[Homo sapiens]
Length = 2083
Score = 77.0 bits (188), Expect = 5e-14
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 8/224 (3%)
Query: 176 KASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQD 235
K R + D K V Y GQ + + + S A+ +F+ LG +V L +
Sbjct: 1791 KLLRELRNLDSRQCRETHKIAVFYVAEGQEDKHSILTNTGGSQAYEDFVAGLGWEVNLTN 1850
Query: 236 FKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAV 295
GF GGL + TG + Y E++FHVST++P ++ D ++ RH+GND V +
Sbjct: 1851 HCGFMGGLQ-KNKSTGLTTPYFATSTVEVIFHVSTRMP-SDSDDSLTKKLRHLGNDEVHI 1908
Query: 296 VFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVF 355
V+ + + +I + F +V+ ++ + + + +VPFFG PL D A+
Sbjct: 1909 VWSEHTRDYRRGIIPTEFGDVLIVIYP----MKNHMFSIQIMKKPEVPFFG-PLFDGAIV 1963
Query: 356 RKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYE 399
G + INA A + RA L+T+ +
Sbjct: 1964 -NGKVLPIMVRATAINASRALKSLIPLYQNFYEERARYLQTIVQ 2006
>gi|51226124 GTPase activating Rap/RanGAP domain-like 1 isoform 1
[Homo sapiens]
Length = 2036
Score = 77.0 bits (188), Expect = 5e-14
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 8/224 (3%)
Query: 176 KASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQD 235
K R + D K V Y GQ + + + S A+ +F+ LG +V L +
Sbjct: 1791 KLLRELRNLDSRQCRETHKIAVFYVAEGQEDKHSILTNTGGSQAYEDFVAGLGWEVNLTN 1850
Query: 236 FKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAV 295
GF GGL + TG + Y E++FHVST++P ++ D ++ RH+GND V +
Sbjct: 1851 HCGFMGGLQ-KNKSTGLTTPYFATSTVEVIFHVSTRMP-SDSDDSLTKKLRHLGNDEVHI 1908
Query: 296 VFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVF 355
V+ + + +I + F +V+ ++ + + + +VPFFG PL D A+
Sbjct: 1909 VWSEHTRDYRRGIIPTEFGDVLIVIYP----MKNHMFSIQIMKKPEVPFFG-PLFDGAIV 1963
Query: 356 RKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYE 399
G + INA A + RA L+T+ +
Sbjct: 1964 -NGKVLPIMVRATAINASRALKSLIPLYQNFYEERARYLQTIVQ 2006
>gi|116256350 tuberous sclerosis 2 isoform 4 [Homo sapiens]
Length = 1740
Score = 73.2 bits (178), Expect = 7e-13
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 171 PVLYPKAS----RLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEE-SPAFVEFLE 225
P+L P S R + D+ + K V+Y GQ++ E +NE S + EFL
Sbjct: 1450 PILLPNESQSFERSVQLLDQIPSYDTHKIAVLYVGEGQSNSELAILSNEHGSYRYTEFLT 1509
Query: 226 FLGQKVKLQDF---KGFRGGLDVTHGQTGTESVYCNFRN-KEIMFHVSTKLPYTEGDAQQ 281
LG+ ++L+D K + GGLDV G+ G + YC + + +FH++T +P + D +
Sbjct: 1510 GLGRLIELKDCQPDKVYLGGLDVC-GEDG-QFTYCWHDDIMQAVFHIATLMPTKDVDKHR 1567
Query: 282 LQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVV 320
+KRH+GND V++V+ D F I F +V+V
Sbjct: 1568 CDKKRHLGNDFVSIVYNDSGEDFKLGTIKGQFNFVHVIV 1606
>gi|116256352 tuberous sclerosis 2 isoform 1 [Homo sapiens]
Length = 1807
Score = 73.2 bits (178), Expect = 7e-13
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 171 PVLYPKAS----RLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEE-SPAFVEFLE 225
P+L P S R + D+ + K V+Y GQ++ E +NE S + EFL
Sbjct: 1517 PILLPNESQSFERSVQLLDQIPSYDTHKIAVLYVGEGQSNSELAILSNEHGSYRYTEFLT 1576
Query: 226 FLGQKVKLQDF---KGFRGGLDVTHGQTGTESVYCNFRN-KEIMFHVSTKLPYTEGDAQQ 281
LG+ ++L+D K + GGLDV G+ G + YC + + +FH++T +P + D +
Sbjct: 1577 GLGRLIELKDCQPDKVYLGGLDVC-GEDG-QFTYCWHDDIMQAVFHIATLMPTKDVDKHR 1634
Query: 282 LQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVV 320
+KRH+GND V++V+ D F I F +V+V
Sbjct: 1635 CDKKRHLGNDFVSIVYNDSGEDFKLGTIKGQFNFVHVIV 1673
>gi|167412124 tuberous sclerosis 2 isoform 5 [Homo sapiens]
Length = 1784
Score = 73.2 bits (178), Expect = 7e-13
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 171 PVLYPKAS----RLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEE-SPAFVEFLE 225
P+L P S R + D+ + K V+Y GQ++ E +NE S + EFL
Sbjct: 1494 PILLPNESQSFERSVQLLDQIPSYDTHKIAVLYVGEGQSNSELAILSNEHGSYRYTEFLT 1553
Query: 226 FLGQKVKLQDF---KGFRGGLDVTHGQTGTESVYCNFRN-KEIMFHVSTKLPYTEGDAQQ 281
LG+ ++L+D K + GGLDV G+ G + YC + + +FH++T +P + D +
Sbjct: 1554 GLGRLIELKDCQPDKVYLGGLDVC-GEDG-QFTYCWHDDIMQAVFHIATLMPTKDVDKHR 1611
Query: 282 LQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVV 320
+KRH+GND V++V+ D F I F +V+V
Sbjct: 1612 CDKKRHLGNDFVSIVYNDSGEDFKLGTIKGQFNFVHVIV 1650
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 43.9 bits (102), Expect = 5e-04
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 420 NGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAK-AAGISL 478
+GSG G + RSRS S+ ++ + ++ S++HS DLA + S
Sbjct: 687 SGSGSGSSYSGSSS--RSRSLSVSSVSSVSSATSSSSSAHSVDSEDMYADLASPVSSASS 744
Query: 479 IVPGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRES---PPAGQKTPDSGHVSQEPKSE 535
P + TRK+ G S++ + ++E + KR+S PP K P G SQ+P +
Sbjct: 745 RSPAPAQTRKEKGK--SKKE-----DGVKEEKRKRDSSTQPPKSAKPPAGGKSSQQPSTP 797
Query: 536 NSSTQSSPEMPT 547
+ P+ T
Sbjct: 798 QQAPPGQPQQGT 809
Score = 36.2 bits (82), Expect = 0.099
Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 17/156 (10%)
Query: 507 QEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSS-------------PEMPTTKNRAE 553
++ +EK + P + ++ PK E ++T + P K
Sbjct: 473 EKEREKEKGKPKPRSPQPPSRQAEPPKKEAATTGPQVKRADEWKDPWRRSKSPKKKLGVS 532
Query: 554 TAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLE-SVSSSGTPHKRDSFIYSTW 612
+ RA + S SS+SAS+ + + G + S SSS + + S +S++
Sbjct: 533 VSPSRARRRRKTSASSASASNSSRSSSRSSSYSGSGSSRSRSRSSSYSSYSSRSSRHSSF 592
Query: 613 LEDSVSTTSGGSSPGPSRSPHPDAGKL---GDPACP 645
+ S SSP PS +P P + G+PA P
Sbjct: 593 SGSRSRSRSFSSSPSPSPTPSPHRPSIRTKGEPAPP 628
Score = 33.9 bits (76), Expect = 0.49
Identities = 48/201 (23%), Positives = 66/201 (32%), Gaps = 13/201 (6%)
Query: 437 SRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLIV---PGKSPTRKKSGPF 493
SRS S G S + + S S S + + + + S P SPT P
Sbjct: 559 SRSSSYSGSGSSRSRSRSSSYSSYSSRSSRHSSFSGSRSRSRSFSSSPSPSPTPSPHRP- 617
Query: 494 GSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAE 553
S R+ + EK PA P + P E + P K R
Sbjct: 618 -SIRTKGEPAPPPGKAGEKSVKKPAPPPAPPQATKTTAPVPEPTKP-GDPREARRKERPA 675
Query: 554 TAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWL 613
R L S S+ S +S + V + + SSS + H DS
Sbjct: 676 RTPPRRRTLSGSGSGSGSSYSGSSSRSRSLSVSSVSSVSSATSSSSSAHSVDS------- 728
Query: 614 EDSVSTTSGGSSPGPSRSPHP 634
ED + + S SRSP P
Sbjct: 729 EDMYADLASPVSSASSRSPAP 749
>gi|113415504 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 42.7 bits (99), Expect = 0.001
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 13/140 (9%)
Query: 494 GSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAE 553
G ++ S +G++ + R P +K +S+ S S + TK +E
Sbjct: 5 GVKKKSLLGVKENNKKSSTRAPSPTKRKD----------RSDEKSKDRSKDKGATKESSE 54
Query: 554 TAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWL 613
R + K S SS S+S+ + + TG S SSS + R S+
Sbjct: 55 KDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSG---SSST 111
Query: 614 EDSVSTTSGGSSPGPSRSPH 633
S S++S SP PSR H
Sbjct: 112 SRSSSSSSSSGSPSPSRRRH 131
>gi|169166499 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 42.7 bits (99), Expect = 0.001
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 13/140 (9%)
Query: 494 GSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAE 553
G ++ S +G++ + R P +K +S+ S S + TK +E
Sbjct: 5 GVKKKSLLGVKENNKKSSTRAPSPTKRKD----------RSDEKSKDRSKDKGATKESSE 54
Query: 554 TAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWL 613
R + K S SS S+S+ + + TG S SSS + R S+
Sbjct: 55 KDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSG---SSST 111
Query: 614 EDSVSTTSGGSSPGPSRSPH 633
S S++S SP PSR H
Sbjct: 112 SRSSSSSSSSGSPSPSRRRH 131
>gi|113415498 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 42.7 bits (99), Expect = 0.001
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 13/140 (9%)
Query: 494 GSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAE 553
G ++ S +G++ + R P +K +S+ S S + TK +E
Sbjct: 5 GVKKKSLLGVKENNKKSSTRAPSPTKRKD----------RSDEKSKDRSKDKGATKESSE 54
Query: 554 TAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWL 613
R + K S SS S+S+ + + TG S SSS + R S+
Sbjct: 55 KDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSG---SSST 111
Query: 614 EDSVSTTSGGSSPGPSRSPH 633
S S++S SP PSR H
Sbjct: 112 SRSSSSSSSSGSPSPSRRRH 131
>gi|88973230 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 3 [Homo sapiens]
Length = 305
Score = 42.7 bits (99), Expect = 0.001
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 13/140 (9%)
Query: 494 GSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAE 553
G ++ S +G++ + R P +K +S+ S S + TK +E
Sbjct: 5 GVKKKSLLGVKENNKKSSTRAPSPTKRKD----------RSDEKSKDRSKDKGATKESSE 54
Query: 554 TAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWL 613
R + K S SS S+S+ + + TG S SSS + R S+
Sbjct: 55 KDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSG---SSST 111
Query: 614 EDSVSTTSGGSSPGPSRSPH 633
S S++S SP PSR H
Sbjct: 112 SRSSSSSSSSGSPSPSRRRH 131
>gi|169166609 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 6 [Homo sapiens]
Length = 305
Score = 42.0 bits (97), Expect = 0.002
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 13/140 (9%)
Query: 494 GSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAE 553
G ++ S +G++ + R P +K +S+ S S + TK +E
Sbjct: 5 GVKKKSLLGVKENNKKSSTRAPSPTKRKD----------RSDEKSKDRSKDKGATKESSE 54
Query: 554 TAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWL 613
R + K S SS S+S+ + + TG S SSS + R S+
Sbjct: 55 KDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSG---SSST 111
Query: 614 EDSVSTTSGGSSPGPSRSPH 633
S S++S SP PSR H
Sbjct: 112 SRSSSSSSSSGSPSPSRRRH 131
>gi|113415994 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 2 [Homo sapiens]
Length = 305
Score = 42.0 bits (97), Expect = 0.002
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 13/140 (9%)
Query: 494 GSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAE 553
G ++ S +G++ + R P +K +S+ S S + TK +E
Sbjct: 5 GVKKKSLLGVKENNKKSSTRAPSPTKRKD----------RSDEKSKDRSKDKGATKESSE 54
Query: 554 TAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWL 613
R + K S SS S+S+ + + TG S SSS + R S+
Sbjct: 55 KDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSG---SSST 111
Query: 614 EDSVSTTSGGSSPGPSRSPH 633
S S++S SP PSR H
Sbjct: 112 SRSSSSSSSSGSPSPSRRRH 131
>gi|6857826 RNA-binding protein S1, serine-rich domain [Homo
sapiens]
Length = 305
Score = 42.0 bits (97), Expect = 0.002
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 13/140 (9%)
Query: 494 GSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAE 553
G ++ S +G++ + R P +K +S+ S S + TK +E
Sbjct: 5 GVKKKSLLGVKENNKKSSTRAPSPTKRKD----------RSDEKSKDRSKDKGATKESSE 54
Query: 554 TAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWL 613
R + K S SS S+S+ + + TG S SSS + R S+
Sbjct: 55 KDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSG---SSST 111
Query: 614 EDSVSTTSGGSSPGPSRSPH 633
S S++S SP PSR H
Sbjct: 112 SRSSSSSSSSGSPSPSRRRH 131
>gi|18379334 RNA-binding protein S1, serine-rich domain [Homo
sapiens]
Length = 305
Score = 42.0 bits (97), Expect = 0.002
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 13/140 (9%)
Query: 494 GSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAE 553
G ++ S +G++ + R P +K +S+ S S + TK +E
Sbjct: 5 GVKKKSLLGVKENNKKSSTRAPSPTKRKD----------RSDEKSKDRSKDKGATKESSE 54
Query: 554 TAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWL 613
R + K S SS S+S+ + + TG S SSS + R S+
Sbjct: 55 KDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSG---SSST 111
Query: 614 EDSVSTTSGGSSPGPSRSPH 633
S S++S SP PSR H
Sbjct: 112 SRSSSSSSSSGSPSPSRRRH 131
>gi|29570782 additional sex combs like 1 [Homo sapiens]
Length = 1541
Score = 40.4 bits (93), Expect = 0.005
Identities = 53/201 (26%), Positives = 81/201 (40%), Gaps = 37/201 (18%)
Query: 478 LIVPGKS-------PTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQ 530
L VPG+S TR++ G F R + + + +K+ES AG S
Sbjct: 386 LCVPGESVRIQRGPATRQRDGHFKKRSRPDLRTRARRNLYKKQESEQAGVAKDAKSVASD 445
Query: 531 EPKSENSSTQ------SSPEMPTTKNRA----------ETAAQRAEALKD-FSRSSSSAS 573
P ++ + SSP +P T + A E+ A R +A D +R+S+S
Sbjct: 446 VPLYKDGEAKTDPAGLSSPHLPGTSSAAPDLEGPEFPVESVASRIQAEPDNLARASASPD 505
Query: 574 SFASVVEET---EGVDGEDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGSSPGPSR 630
S+ +ET E D + E +S+ P K+ LED S + S +
Sbjct: 506 RIPSLPQETVDQEPKDQKRKSFEQAASASFPEKKPR------LEDRQSFRNTIESV-HTE 558
Query: 631 SPHPDAGKLGDPACPEIKIQL 651
P P +P P I+IQL
Sbjct: 559 KPQPTK---EEPKVPPIRIQL 576
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 40.0 bits (92), Expect = 0.007
Identities = 44/173 (25%), Positives = 64/173 (36%), Gaps = 17/173 (9%)
Query: 465 PNNPDLAKAAGISLIVPGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTPD 524
P +PD A+A S + S SS+ G E E G K D
Sbjct: 2541 PKSPDKAQAEQDGAEESESSSSSSSGSSSSSSSSSSSGSET--------EGEEEGDKNGD 2592
Query: 525 SG-HVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETE 583
G S SS +SP A +++ + + S SSSS+SS +S +
Sbjct: 2593 GGCGTGGRNCSAASSRAASP--------ASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2644
Query: 584 GVDGEDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGSSPGPSRSPHPDA 636
+ S SSS + S ST EDS ++ ++P P+ P A
Sbjct: 2645 SSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQA 2697
Score = 35.4 bits (80), Expect = 0.17
Identities = 43/197 (21%), Positives = 67/197 (34%), Gaps = 15/197 (7%)
Query: 460 SGSFAPNNP-------DLAKAAGISLIVPG----KSPTRKKSGPFGSRRSSAIGIENIQE 508
+GS P P DLA+ G L KSP + ++ G+ S + +
Sbjct: 2508 AGSSEPKAPWPKATDGDLAQEPGPGLTFEDSGNPKSPDKAQAEQDGAEESESSSSSSSGS 2567
Query: 509 VQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRS 568
S +G +T G + + +RA + A + + S S
Sbjct: 2568 SSSSSSSSSSGSET--EGEEEGDKNGDGGCGTGGRNCSAASSRAASPASSSSSSS--SSS 2623
Query: 569 SSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGSSPGP 628
SSS+SS +S + + S SSS + S S+ S + S
Sbjct: 2624 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDD 2683
Query: 629 SRSPHPDAGKLGDPACP 645
+P P AG A P
Sbjct: 2684 EAAPAPTAGPSAQAALP 2700
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 39.7 bits (91), Expect = 0.009
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 481 PGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTP-DSGHVSQEPKSENSST 539
P K ++KK G + A E+ Q V+EK + KTP S H +++ K SS+
Sbjct: 126 PLKKDSKKKGGSY------ATNPESKQIVEEKTKRQNEADKTPLKSSHENEQSKKSKSSS 179
Query: 540 QSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASSF 575
+++PE +K ++ +Q+ + KD S + + F
Sbjct: 180 ETNPESQNSKTVSKNCSQKDK--KDSKNSKKTNTEF 213
>gi|20070163 voltage-dependent calcium channel alpha 1G subunit
isoform 1 [Homo sapiens]
Length = 2377
Score = 38.9 bits (89), Expect = 0.015
Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 13/174 (7%)
Query: 432 KRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLIVPGKSPTRKKSG 491
+R S S A P+ S+ HS A ++ +++ SL G++P+ K+
Sbjct: 1067 RRTSSSGSAEPGAAHEMKSPPSARSSPHSPWSAASSWTSRRSSRNSL---GRAPSLKRRS 1123
Query: 492 PFGSRRSSAIG----IENIQEVQEKRESPPAGQKTPDSGHVSQEPKS--ENSSTQSSPEM 545
P G RRS G ++ +E E+ + PAG G + +E KS + T P +
Sbjct: 1124 PSGERRSLLSGEGQESQDEEESSEEERASPAGSDHRHRGSLEREAKSSFDLPDTLQVPGL 1183
Query: 546 PTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSG 599
T + +A++ +D + S+S ++ + +DG+D E S G
Sbjct: 1184 HRTASGRGSASEH----QDCNGKSASGRLARALRPDDPPLDGDDADDEGNLSKG 1233
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,019,340
Number of Sequences: 37866
Number of extensions: 1422324
Number of successful extensions: 5131
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 207
Number of HSP's that attempted gapping in prelim test: 4735
Number of HSP's gapped (non-prelim): 485
length of query: 663
length of database: 18,247,518
effective HSP length: 109
effective length of query: 554
effective length of database: 14,120,124
effective search space: 7822548696
effective search space used: 7822548696
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.